Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0010005

Physical Location & Seq

Genomic Coordinates Reverse (-)

4976191 .. 4981825

Gene Structure 5635 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1037800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1920 bp

ATGGGAGGAGTATCAAGAACTCTCCTCACTTTCTCTCTCTACTCAAACCTTTTCGCCTTGTCACGTCTCCCCGCCTCCAAACGCTTCTCTCTCATCAACCCCACCAGGGTTTTAACAAGGGTTAGGCCTCTTTGCACCGCCACAGCCACAACCACCACCGCCAGCCCCGCCGGTACGGTTGATTTCGAAGACGAAGAGAACCAACCCTTGAAGCACTCCTTGCTTCTCGAGAGGCTGCGTCTGAGGCACCTCAAGAGCAATGCCAACCCACAAGCCAAAACCGCCGGCGGAAATTCAATTGGGGATGCCCAGAGGCAGAGCGATGACGGGTTGGGGAGGTCGGAGAACAGGAAGAAGAGGGAGGTTGGGAGTTTTGGGGAGTTGGGTGTGAGCGAGGAGGTAATTGCGGCGGTGAGAGAGATGGGAATTGAGGTTCCCACTGAAATTCAGAGCATTGGGATTCCGGCGGTGTTGGAAGGGAAGACTGTGGTCTTGGGTTCTCACACTGGCTCTGGCAAGACTCTGGCTTACATGTTGCCTCTTGCCCAGCTGTTGAGAAAGGATGAGGCTGAAAGTGGTATTCAAATGAAGCCCAGGCGTCCTAGAGCTGTTGTGCTATGCCCCACAAGGGAGCTGTCTGAGCAGGTTTTTCGTGTTTCCAAGTTTGTCAGCCACCATGCAAGATTCAGGTCTACTATGGTAAGCGGCGGTGGTCGGTTGAGACCCCAGGAGGATTCATTGAATAACCCAATTGAAATGGTAGTTGGTACCCCTGGCAGGGTTCTCCAACATATTGAGGATGGCAACTTGGTTTACGGTGACATAAAATATGTGGTATTGGATGAGGCAGATACCATGTTTGATCGTGGCTTTGGTCCAGACATTCGCAAGTTTCTTGTCCCATTAAAACATCGTGCATCGAAACCCGGAGGGCAAGGGTTCCAAACTGTTTTGGTCACAGCAACAATGACAAAGGCAGTGCAAAACCTGATTGATGAGGAGTTCCAAGGAATATTACACTTGCGCACATCCTCACTGCATAAAAAGATTGCATCCGCACGTCATGATTTTGTTAAGATTTCAGGTGCTGAGAACAAGCTGGAATCACTTCTACAGGTTCTGGAGCCAAGTTTAGCAAAGGGAAATAGAGTAATGGTGTTCTGTAACACATTAAGTTCCAGCCGTGCTGTGGATCACTTTCTCAATGAAAATCAGATCTCTACTGTCAATTATCATGGTGAGGTGCCAGCAGAACAAAGGGTTGAAAACCTCAAAAAGTTTAAGAGCAACGATGGAGATTGCCCTACATTGGTCTGCACAGACCTGGCTGCAAGGGGACTGGACTTGGATGTAGACCATGTTATAATGTTTGATTTTCCTTTGAACTCTATTGACTACCTTCATCGTACAGGAAGAACTGCTCGTATGGGTGCAAAAGGGAAAGTGACGAGTTTGGTTGCTAAGAAGAACCTCATGTTAGCGAACCGAATTGAGGAAGCAATAAAGAAGAATGAAAGCTTAGAATCTCTCAGTGTAGATAGCGTCAAGAGGGACATTGCCCGTTCGCGAATTACTCCGCAGAATGGAAAGAATGTAAAACCGGTGAGAGTCTCAAATCAGAAAAACAAGAGCAGACCAGCATTTGCTCCTACAAAATCTGCAAAACCATCTTTCCAGTCATCGAAGTCAGTAGAACCTTCCAGAGCGAGCAGCTTGAAAAGAGCTCCTTCCAGTGCTAGCAACTCAAGAAAAGCTCCTTCCAGTGCAAACAGCTCTAGAAAAGCCTCTTTTAGTGAGAAGAGGCAACCAGAAAGCAGAAGATTCAGTACAGTTAAATCAACGCCCTCGAAGTTGAGTGTGGTTGGGTTTAGGGGGCGAGCTTCTTGGTCTAGTAAGAAAGAATCGTTGGAGTCGAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0010501 GO:0016043 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019843 GO:0022607 GO:0022613 GO:0031974 GO:0031981 GO:0034470 GO:0034622 GO:0034641 GO:0034660 GO:0042254 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0065003 GO:0070013 GO:0070035 GO:0070180 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0110102 GO:0140098 GO:1901259 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

640

Amino Acids

70.09

Weight (kDa)

10.03

Isoelectric Point (pI)

45.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	147 - 329	1.1e-37	DEAD/DEAH box helicase
Helicase_C	PF00271	366 - 477	2.2e-27	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G09730
fragaria_vesca	FvH4_2g12870 FvH4_2g12870 FvH4_2g12870 FvH4_2g12870
malus_domestica	MD05G1035500.v1.1 MD10G1037800.v1.1
prunus_persica	Prupe.8G043300_v2.0.a1
pyrus_communis	pycom05g02600 pycom10g02570
rosa_chinensis	RchiOBHm_Chr6g0273971
rosa_laevigata	RLG00000013588
rosa_multiflora	Rmu_sc0000045.1_g000081 Rmu_sc0013374.1_g000007
rosa_roxburghii	Rroxscaffold_7G00194840
rosa_rugosa	Rorug06G0077900
rosa_samantha	Rh6AG193500 Rh6BG197100 Rh6CG197000 Rh6DG188900
rosa_wichuraiana	Rw6G016870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1364
Acc16I	TGCGCA	1 cut(s)	1025
Acc36I	ACCTGC	1 cut(s)	634
Acc65I	GGTACC	1 cut(s)	767
AccB1I	GGYRCC	3 cut(s)	246, 767, 1243
AccI	GTMKAC	2 cut(s)	692, 1353
AccII	CGCG	1 cut(s)	1567
AclWI	GGATC	1 cut(s)	1200
AcsI	RAATTY	2 cut(s)	292, 444
AcyI	GRCGYC	1 cut(s)	598
AfaI	GTAC	4 cut(s)	175, 769, 1408, 1828
AfiI	CCNNNNNNNGG	8 cut(s)	106, 628, 777, 778, 1189, 1309, 1492, 1583
AflIII	ACRYGT	1 cut(s)	531
AgeI	ACCGGT	1 cut(s)	1600
AgsI	TTSAA	8 cut(s)	211, 297, 584, 742, 755, 1265, 1384, 1717
AjiI	CACGTC	2 cut(s)	65, 1061
AjnI	CCWGG	5 cut(s)	104, 593, 726, 772, 1323
AjuI	GAANNNNNNNTTGG	3 cut(s)	747, 779, 1889
AloI	GAACNNNNNNTCC	2 cut(s)	417, 449
Alw21I	GWGCWC	1 cut(s)	1726
Alw26I	GTCTC	3 cut(s)	71, 715, 1615
AlwI	GGATC	1 cut(s)	1200
AlwNI	CAGNNNCTG	2 cut(s)	1088, 1120
Ama87I	CYCGRG	1 cut(s)	227
AoxI	GGCC	1 cut(s)	125
ApeKI	GCWGC	3 cut(s)	235, 1328, 1710
ApoI	RAATTY	2 cut(s)	292, 444
AsiGI	ACCGGT	1 cut(s)	1600
Asp700I	GAANNNNTTC	1 cut(s)	1107
Asp718I	GGTACC	1 cut(s)	767
AspLEI	GCGC	1 cut(s)	1026
AspS9I	GGNCC	1 cut(s)	875
AsuC2I	CCSGG	1 cut(s)	927
AsuHPI	GGTGA	4 cut(s)	424, 830, 1250, 1615
AsuII	TTCGAA	1 cut(s)	186
AsuNHI	GCTAGC	1 cut(s)	1736
AvaI	CYCGRG	1 cut(s)	227
AvaII	GGWCC	1 cut(s)	875
BanI	GGYRCC	3 cut(s)	246, 767, 1243
BanII	GRGCYC	1 cut(s)	1726
BarI	GAAGNNNNNNTAC	2 cut(s)	1810, 1842
BbsI	GAAGAC	2 cut(s)	195, 488
Bbv12I	GWGCWC	1 cut(s)	1726
BbvI	GCAGC	3 cut(s)	222, 1315, 1722
BccI	CCATC	4 cut(s)	415, 794, 1286, 1675
BceAI	ACGGC	1 cut(s)	1167
BcgI	CGANNNNNNTGC	2 cut(s)	632, 666
BciT130I	CCWGG	5 cut(s)	106, 595, 728, 774, 1325
BcnI	CCSGG	1 cut(s)	927
BcoDI	GTCTC	3 cut(s)	71, 715, 1615
BfaI	CTAG	4 cut(s)	603, 1737, 1776, 1890
BfmI	CTRYAG	1 cut(s)	1112
BfuAI	ACCTGC	1 cut(s)	634
BglII	AGATCT	1 cut(s)	1215
BisI	GCNGC	5 cut(s)	236, 408, 706, 1329, 1711
BlsI	GCNGC	5 cut(s)	237, 409, 707, 1330, 1712
Bme1390I	CCNGG	6 cut(s)	106, 595, 728, 774, 927, 1325
Bme18I	GGWCC	1 cut(s)	875
BmeT110I	CYCGRG	1 cut(s)	227
BmgBI	CACGTC	2 cut(s)	65, 1061
BmgT120I	GGNCC	1 cut(s)	875
BmiI	GGNNCC	6 cut(s)	248, 435, 769, 941, 1125, 1245
BmrFI	CCNGG	6 cut(s)	106, 595, 728, 774, 927, 1325
BmsI	GCATC	3 cut(s)	295, 926, 1061
BmtI	GCTAGC	1 cut(s)	1740
BoxI	GACNNNNGTC	1 cut(s)	488
BpiI	GAAGAC	2 cut(s)	195, 488
BpmI	CTGGAG	1 cut(s)	1142
Bpu14I	TTCGAA	1 cut(s)	186
BpuEI	CTTGAG	2 cut(s)	236, 1729
BpuMI	CCSGG	1 cut(s)	927
BsaHI	GRCGYC	1 cut(s)	598
BsaI	GGTCTC	1 cut(s)	715
BsaJI	CCNNGG	5 cut(s)	105, 593, 726, 772, 1006
BsaWI	WCCGGW	1 cut(s)	1600
Bsc4I	CCNNNNNNNGG	8 cut(s)	106, 628, 777, 778, 1189, 1309, 1492, 1583
Bse118I	RCCGGY	3 cut(s)	170, 284, 1600
Bse1I	ACTGG	5 cut(s)	511, 1344, 1675, 1731, 1761
Bse3DI	GCAATG	2 cut(s)	265, 1554
BseBI	CCWGG	5 cut(s)	106, 595, 728, 774, 1325
BseDI	CCNNGG	5 cut(s)	105, 593, 726, 772, 1006
BseGI	GGATG	7 cut(s)	310, 568, 805, 847, 1028, 1052, 1354
BseLI	CCNNNNNNNGG	8 cut(s)	106, 628, 777, 778, 1189, 1309, 1492, 1583
BseMI	GCAATG	2 cut(s)	265, 1554
BseMII	CTCAG	4 cut(s)	233, 630, 1080, 1543
BseNI	ACTGG	5 cut(s)	511, 1344, 1675, 1731, 1761
BseRI	GAGGAG	4 cut(s)	14, 21, 410, 1013
BseXI	GCAGC	3 cut(s)	222, 1315, 1722
BseYI	CCCAGC	1 cut(s)	546
BsgI	GTGCAG	1 cut(s)	1300
Bsh1236I	CGCG	1 cut(s)	1567
BshFI	GGCC	1 cut(s)	127
BshNI	GGYRCC	3 cut(s)	246, 767, 1243
BshTI	ACCGGT	1 cut(s)	1600
BsiHKAI	GWGCWC	1 cut(s)	1726
BsiHKCI	CYCGRG	1 cut(s)	227
BsiSI	CCGG	5 cut(s)	171, 285, 464, 927, 1601
BslFI	GGGAC	3 cut(s)	884, 1350, 1565
BslI	CCNNNNNNNGG	8 cut(s)	106, 628, 777, 778, 1189, 1309, 1492, 1583
BsmAI	GTCTC	3 cut(s)	71, 715, 1615
BsmBI	CGTCTC	1 cut(s)	71
BsmFI	GGGAC	3 cut(s)	884, 1350, 1565
BsnI	GGCC	1 cut(s)	127
Bso31I	GGTCTC	1 cut(s)	715
BsoBI	CYCGRG	1 cut(s)	227
Bsp119I	TTCGAA	1 cut(s)	186
Bsp1286I	GDGCHC	1 cut(s)	1726
Bsp143I	GATC	3 cut(s)	862, 1192, 1215
Bsp68I	TCGCGA	1 cut(s)	1567
BspANI	GGCC	1 cut(s)	127
BspCNI	CTCAG	4 cut(s)	234, 631, 1081, 1542
BspFNI	CGCG	1 cut(s)	1567
BspHI	TCATGA	1 cut(s)	1063
BspLI	GGNNCC	6 cut(s)	248, 435, 769, 941, 1125, 1245
BspMI	ACCTGC	1 cut(s)	634
BspOI	GCTAGC	1 cut(s)	1740
BspPI	GGATC	1 cut(s)	1200
BspT104I	TTCGAA	1 cut(s)	186
BspT107I	GGYRCC	3 cut(s)	246, 767, 1243
BspTNI	GGTCTC	1 cut(s)	715
BsrDI	GCAATG	2 cut(s)	265, 1554
BsrFI	RCCGGY	3 cut(s)	170, 284, 1600
BsrI	ACTGG	5 cut(s)	511, 1344, 1675, 1731, 1761
BssAI	RCCGGY	3 cut(s)	170, 284, 1600
BssECI	CCNNGG	5 cut(s)	105, 593, 726, 772, 1006
BssMI	GATC	3 cut(s)	862, 1192, 1215
BssNI	GRCGYC	1 cut(s)	598
BssT1I	CCWWGG	1 cut(s)	1006
Bst2UI	CCWGG	5 cut(s)	106, 595, 728, 774, 1325
Bst4CI	ACNGT	6 cut(s)	178, 487, 818, 949, 1225, 1831
Bst6I	CTCTTC	3 cut(s)	189, 350, 1793
BstACI	GRCGYC	1 cut(s)	598
BstAPI	GCANNNNNTGC	1 cut(s)	220
BstBI	TTCGAA	1 cut(s)	186
BstC8I	GCNNGC	6 cut(s)	163, 286, 1248, 1708, 1738, 1878
BstDEI	CTNAG	6 cut(s)	242, 639, 1089, 1461, 1519, 1529
BstF5I	GGATG	7 cut(s)	310, 568, 805, 847, 1028, 1052, 1354
BstFNI	CGCG	1 cut(s)	1567
BstHHI	GCGC	1 cut(s)	1026
BstKTI	GATC	3 cut(s)	865, 1195, 1218
BstMAI	GTCTC	3 cut(s)	71, 715, 1615
BstMBI	GATC	3 cut(s)	862, 1192, 1215
BstMWI	GCNNNNNNNGC	5 cut(s)	167, 220, 244, 281, 640
BstNI	CCWGG	5 cut(s)	106, 595, 728, 774, 1325
BstNSI	RCATGY	1 cut(s)	535
BstPAI	GACNNNNGTC	1 cut(s)	488
BstSCI	CCNGG	6 cut(s)	104, 593, 726, 772, 925, 1323
BstSFI	CTRYAG	1 cut(s)	1112
BstUI	CGCG	1 cut(s)	1567
BstV1I	GCAGC	3 cut(s)	222, 1315, 1722
BstV2I	GAAGAC	2 cut(s)	195, 488
BstX2I	RGATCY	1 cut(s)	1215
BstYI	RGATCY	1 cut(s)	1215
BsuRI	GGCC	1 cut(s)	127
BtgZI	GCGATG	1 cut(s)	336
BtrI	CACGTC	2 cut(s)	65, 1061
BtsCI	GGATG	7 cut(s)	310, 568, 805, 847, 1028, 1052, 1354
BtsI	GCAGTG	2 cut(s)	984, 1034
BtsIMutI	CAGTG	7 cut(s)	438, 504, 984, 1034, 1537, 1738, 1768
BtuMI	TCGCGA	1 cut(s)	1567
BveI	ACCTGC	1 cut(s)	634
Cac8I	GCNNGC	6 cut(s)	163, 286, 1248, 1708, 1738, 1878
CaiI	CAGNNNCTG	2 cut(s)	1088, 1120
CciI	TCATGA	1 cut(s)	1063
CfoI	GCGC	1 cut(s)	1026
Cfr10I	RCCGGY	3 cut(s)	170, 284, 1600
Cfr13I	GGNCC	1 cut(s)	875
CseI	GACGC	3 cut(s)	227, 587, 1531
Csp6I	GTAC	4 cut(s)	174, 768, 1407, 1827
CspAI	ACCGGT	1 cut(s)	1600
CviAII	CATG	7 cut(s)	532, 677, 856, 1064, 1235, 1358, 1474
CviQI	GTAC	4 cut(s)	174, 768, 1407, 1827
DdeI	CTNAG	6 cut(s)	242, 639, 1089, 1461, 1519, 1529
DpnI	GATC	3 cut(s)	864, 1194, 1217
DpnII	GATC	3 cut(s)	862, 1192, 1215
Eam1104I	CTCTTC	3 cut(s)	189, 350, 1793
EarI	CTCTTC	3 cut(s)	189, 350, 1793
EciI	GGCGGA	1 cut(s)	303
Ecl136II	GAGCTC	1 cut(s)	1724
Eco130I	CCWWGG	1 cut(s)	1006
Eco147I	AGGCCT	1 cut(s)	127
Eco24I	GRGCYC	1 cut(s)	1726
Eco31I	GGTCTC	1 cut(s)	715
Eco47I	GGWCC	1 cut(s)	875
Eco53kI	GAGCTC	1 cut(s)	1724
Eco88I	CYCGRG	1 cut(s)	227
EcoICRI	GAGCTC	1 cut(s)	1724
EcoRII	CCWGG	5 cut(s)	104, 593, 726, 772, 1323
EcoT14I	CCWWGG	1 cut(s)	1006
EcoT38I	GRGCYC	1 cut(s)	1726
ErhI	CCWWGG	1 cut(s)	1006
Esp3I	CGTCTC	1 cut(s)	71
FaeI	CATG	7 cut(s)	535, 680, 859, 1067, 1238, 1361, 1477
FalI	AAGNNNNNCTT	4 cut(s)	203, 235, 1711, 1743
FaqI	GGGAC	3 cut(s)	884, 1350, 1565
FatI	CATG	7 cut(s)	531, 676, 855, 1063, 1234, 1357, 1473
FauI	CCCGC	2 cut(s)	79, 175
FblI	GTMKAC	2 cut(s)	692, 1353
Fnu4HI	GCNGC	5 cut(s)	236, 408, 706, 1329, 1711
FokI	GGATG	7 cut(s)	317, 575, 812, 854, 1015, 1039, 1361
FriOI	GRGCYC	1 cut(s)	1726
Fsp4HI	GCNGC	5 cut(s)	236, 408, 706, 1329, 1711
FspBI	CTAG	4 cut(s)	603, 1737, 1776, 1890
FspI	TGCGCA	1 cut(s)	1025
GlaI	GCGC	1 cut(s)	1025
GluI	GCNGC	5 cut(s)	236, 408, 706, 1329, 1711
GsaI	CCCAGC	1 cut(s)	550
GsuI	CTGGAG	1 cut(s)	1142
HaeIII	GGCC	1 cut(s)	127
HapII	CCGG	5 cut(s)	171, 285, 464, 927, 1601
HgaI	GACGC	3 cut(s)	227, 587, 1531
HhaI	GCGC	1 cut(s)	1026
Hin1I	GRCGYC	1 cut(s)	598
Hin1II	CATG	7 cut(s)	535, 680, 859, 1067, 1238, 1361, 1477
Hin6I	GCGC	1 cut(s)	1024
HinP1I	GCGC	1 cut(s)	1024
HindIII	AAGCTT	1 cut(s)	1516
HpaII	CCGG	5 cut(s)	171, 285, 464, 927, 1601
HphI	GGTGA	4 cut(s)	424, 830, 1250, 1615
Hpy166II	GTNNAC	3 cut(s)	693, 814, 1354
Hpy188I	TCNGA	6 cut(s)	243, 343, 450, 640, 1215, 1620
Hpy8I	GTNNAC	3 cut(s)	693, 814, 1354
HpyAV	CCTTC	5 cut(s)	470, 1409, 1707, 1737, 1767
HpyCH4III	ACNGT	6 cut(s)	178, 487, 818, 949, 1225, 1831
HpyCH4IV	ACGT	2 cut(s)	64, 1060
HpyF10VI	GCNNNNNNNGC	5 cut(s)	167, 220, 244, 281, 640
HpyF3I	CTNAG	6 cut(s)	242, 639, 1089, 1461, 1519, 1529
HpySE526I	ACGT	2 cut(s)	64, 1060
Hsp92I	GRCGYC	1 cut(s)	598
Hsp92II	CATG	7 cut(s)	535, 680, 859, 1067, 1238, 1361, 1477
HspAI	GCGC	1 cut(s)	1024
KpnI	GGTACC	1 cut(s)	771
KroI	GCCGGC	1 cut(s)	284
KroNI	GCCGGC	1 cut(s)	286
Kzo9I	GATC	3 cut(s)	862, 1192, 1215
LmnI	GCTCC	5 cut(s)	631, 1123, 1651, 1729, 1759
Lsp1109I	GCAGC	3 cut(s)	222, 1315, 1722
LweI	GCATC	3 cut(s)	295, 926, 1061
MaeI	CTAG	4 cut(s)	603, 1737, 1776, 1890
MaeII	ACGT	2 cut(s)	64, 1060
MaeIII	GTNAC	5 cut(s)	60, 818, 955, 1163, 1444
MalI	GATC	3 cut(s)	864, 1194, 1217
MboI	GATC	3 cut(s)	862, 1192, 1215
MfeI	CAATTG	2 cut(s)	297, 750
MflI	RGATCY	1 cut(s)	1215
MhlI	GDGCHC	1 cut(s)	1726
MluCI	AATT	9 cut(s)	292, 297, 402, 426, 444, 750, 1228, 1488, 1569
MlyI	GAGTC	3 cut(s)	514, 1617, 1919
MmeI	TCCRAC	4 cut(s)	321, 453, 811, 1887
MreI	CGCCGGCG	1 cut(s)	284
MroNI	GCCGGC	1 cut(s)	284
MroXI	GAANNNNTTC	1 cut(s)	1107
MseI	TTAA	6 cut(s)	113, 905, 1074, 1172, 1281, 1833
MspA1I	CMGCKG	1 cut(s)	550
MspI	CCGG	5 cut(s)	171, 285, 464, 927, 1601
MspR9I	CCNGG	6 cut(s)	106, 595, 728, 774, 927, 1325
MunI	CAATTG	2 cut(s)	297, 750
MvaI	CCWGG	5 cut(s)	106, 595, 728, 774, 1325
MvnI	CGCG	1 cut(s)	1567
MwoI	GCNNNNNNNGC	5 cut(s)	167, 220, 244, 281, 640
NaeI	GCCGGC	1 cut(s)	286
NciI	CCSGG	1 cut(s)	927
NdeII	GATC	3 cut(s)	862, 1192, 1215
NgoMIV	GCCGGC	1 cut(s)	284
NheI	GCTAGC	1 cut(s)	1736
NlaIII	CATG	7 cut(s)	535, 680, 859, 1067, 1238, 1361, 1477
NlaIV	GGNNCC	6 cut(s)	248, 435, 769, 941, 1125, 1245
NmuCI	GTSAC	4 cut(s)	60, 818, 955, 1444
NruI	TCGCGA	1 cut(s)	1567
NsbI	TGCGCA	1 cut(s)	1025
NspI	RCATGY	1 cut(s)	535
NspV	TTCGAA	1 cut(s)	186
PaeR7I	CTCGAG	1 cut(s)	227
PagI	TCATGA	1 cut(s)	1063
PceI	AGGCCT	1 cut(s)	127
PciI	ACATGT	1 cut(s)	531
PcsI	WCGNNNNNNNCGW	1 cut(s)	1910
PdiI	GCCGGC	1 cut(s)	286
PdmI	GAANNNNTTC	1 cut(s)	1107
PfeI	GAWTC	7 cut(s)	460, 684, 734, 1103, 1523, 1821, 1901
PinAI	ACCGGT	1 cut(s)	1600
PkrI	GCNGC	5 cut(s)	237, 409, 707, 1330, 1712
PleI	GAGTC	3 cut(s)	514, 1616, 1918
PpsI	GAGTC	3 cut(s)	514, 1616, 1918
PscI	ACATGT	1 cut(s)	531
PshAI	GACNNNNGTC	1 cut(s)	488
PsiI	TTATAA	1 cut(s)	1364
Psp124BI	GAGCTC	1 cut(s)	1726
Psp6I	CCWGG	5 cut(s)	104, 593, 726, 772, 1323
PspFI	CCCAGC	1 cut(s)	546
PspGI	CCWGG	5 cut(s)	104, 593, 726, 772, 1323
PspN4I	GGNNCC	6 cut(s)	248, 435, 769, 941, 1125, 1245
PspPI	GGNCC	1 cut(s)	875
PstNI	CAGNNNCTG	2 cut(s)	1088, 1120
PsuI	RGATCY	1 cut(s)	1215
PvuII	CAGCTG	1 cut(s)	550
RruI	TCGCGA	1 cut(s)	1567
RsaI	GTAC	4 cut(s)	175, 769, 1408, 1828
RsaNI	GTAC	4 cut(s)	174, 768, 1407, 1827
SacI	GAGCTC	1 cut(s)	1726
SaqAI	TTAA	6 cut(s)	113, 905, 1074, 1172, 1281, 1833
SatI	GCNGC	5 cut(s)	236, 408, 706, 1329, 1711
Sau3AI	GATC	3 cut(s)	862, 1192, 1215
Sau96I	GGNCC	1 cut(s)	875
SchI	GAGTC	3 cut(s)	514, 1617, 1919
ScrFI	CCNGG	6 cut(s)	106, 595, 728, 774, 927, 1325
SduI	GDGCHC	1 cut(s)	1726
SfaNI	GCATC	3 cut(s)	295, 926, 1061
SfcI	CTRYAG	1 cut(s)	1112
Sfr274I	CTCGAG	1 cut(s)	227
SfuI	TTCGAA	1 cut(s)	186
SgrAI	CRCCGGYG	1 cut(s)	284
SinI	GGWCC	1 cut(s)	875
SlaI	CTCGAG	1 cut(s)	227
SmlI	CTYRAG	3 cut(s)	227, 251, 1744
SmoI	CTYRAG	3 cut(s)	227, 251, 1744
Sse9I	AATT	9 cut(s)	292, 297, 402, 426, 444, 750, 1228, 1488, 1569
SseBI	AGGCCT	1 cut(s)	127
SspI	AATATT	1 cut(s)	1014
SspMI	CTAG	4 cut(s)	603, 1737, 1776, 1890
SstI	GAGCTC	1 cut(s)	1726
StuI	AGGCCT	1 cut(s)	127
StyD4I	CCNGG	6 cut(s)	104, 593, 726, 772, 925, 1323
StyI	CCWWGG	1 cut(s)	1006
TaaI	ACNGT	6 cut(s)	178, 487, 818, 949, 1225, 1831
TaiI	ACGT	2 cut(s)	67, 1063
TaqI	TCGA	6 cut(s)	186, 228, 920, 1682, 1847, 1913
TasI	AATT	9 cut(s)	292, 297, 402, 426, 444, 750, 1228, 1488, 1569
TatI	WGTACW	1 cut(s)	1826
TauI	GCSGC	2 cut(s)	410, 708
TfiI	GAWTC	7 cut(s)	460, 684, 734, 1103, 1523, 1821, 1901
Tru1I	TTAA	6 cut(s)	113, 905, 1074, 1172, 1281, 1833
Tru9I	TTAA	6 cut(s)	113, 905, 1074, 1172, 1281, 1833
TscAI	CASTG	7 cut(s)	445, 511, 984, 1041, 1537, 1738, 1768
TseFI	GTSAC	4 cut(s)	60, 818, 955, 1444
TseI	GCWGC	3 cut(s)	235, 1328, 1710
Tsp45I	GTSAC	4 cut(s)	60, 818, 955, 1444
TspDTI	ATGAA	5 cut(s)	602, 726, 1221, 1391, 1527
TspRI	CASTG	7 cut(s)	445, 511, 984, 1041, 1537, 1738, 1768
VpaK11BI	GGWCC	1 cut(s)	875
XapI	RAATTY	2 cut(s)	292, 444
XbaI	TCTAGA	1 cut(s)	1775
XceI	RCATGY	1 cut(s)	535
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1186
XhoI	CTCGAG	1 cut(s)	227
XmiI	GTMKAC	2 cut(s)	692, 1353
XmnI	GAANNNNTTC	1 cut(s)	1107
XspI	CTAG	4 cut(s)	603, 1737, 1776, 1890

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.