Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0010005

Physical Location & Seq

Genomic Coordinates Forward (+)

37127731 .. 37135124

Gene Structure 7394 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG197100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1593 bp

ATGGGAGGAGCAGCAAAGACCCTCCTCCTCACTCTATCTCTCTCCTCAAATCTCTTCACTCTCTCACGTCTCCCAGGACCAGCCACACGCTTCTCTCTCACAAAACTACCAAAACCCACCAGGGTTTTAACAGGGTTTAGGCCTCTTTGCACTGCCACAGCCACCGTTAGTCCCATTCAAGTTGAAGACCAAGACGGACTTCAACCCTTGAAGCATTCCGTTCTTCTTGAGAGGCTTAGGCTCAGGCACCTCAAGAACTCTACCAAACCACAAAACCCAACGAGCACAAAGTCGGTTGGGTATGGGGAGAGGCAGAGTGAGGATAGGTCAGGGAATAAGAAGAAGATTGAGGTTGAGAGTTTTGAGGAATTGGGTGTGAGTGAGGAGGTGTTGGAGGCTTTGAGAGAGATGGGTATTCAAGTTCCTACTGAAATTCAGTGCATTGGAATCCCAGCAGTGTTGGAAGGCAAGACTGTGGTCTTGGGTTCTCATACTGGGTCTGGCAAGACTTTGGCTTACATGTTGCCTCTTGCACAGCTGCTGAGAAGGGATGAGGCCCAAAATGGTATTATAATGAAGCCCAGGCGTCCCCGAACTGTTGTGCTATGCCCCACTAGAGAGCTGTCTGAGCAGGTGTTTCGTGTTGCCAAGTTCATCAGCCATCATGCAAGATTCAGGTCCACTATGGTAAGTGGTGGTGGTAGGTTGAGACCTCAGGAGGATTCATTGAATAACCCAATTGACATGGTAGTTGGGACCCCTGGAAGGATTCTTCAACATATTGAGGATGGCAACTTGGTTTATGGTGACATCAAATACTTGGTGTTGGACGAGACAGATACTATGTTTGACCGTGGCTTTGGTCCAGACATTCGCAAGTTTCTTGCCCCATTAAAGAATCGTGCTTCGAAACCTGATGGCCAAGGATTCCAAACTGTTTTGGTCTCTGCCACAATGACAAAGGGAGTGCAAACTCTGATTGATGAGGAGTTCCAAGGAATACTACATTTGCGCACATCCTCACTGCATAAGAAGATTGCATCTGCTCGTCATGATTTCATTAAGCTTTCTGGTTCTGAGAACAAGATGGAAGCATTGCTGCAGGTTCTCGAGCCAAGTTTAGCAAAGGGAAACAGAGTAATGGTGTTCTGCAACACTTTAAATTCCAGCCGTGCTGTGGATCACTTTCTCAATGAAAATCAGATCTCAACTGCCAATTACCACGGTGAGGTGCCAGCAGAACAAAGGGTTGAAAACCTCAAAAAGTTCAAGAGTGATGATGGAGATTGCCCAACATTGGTCTGCACAGACCTAGCTGCAAGGGGACTAGACTTGGATGTAGACCATGTTATCATGTTTGATTTTCCCTTGAATTCTATCGACTACCTTCATCGTACCGGAAGAACAGCTCGCATGGGTGCAAAAGGTATGCTTTTATTTCCACTAGCATTTTCTTTTAATATTTTTCTCTCTGATGTAATTGTCATCATCACTACTAGACTTACCAATCCATTTGTAATGTTTTTAAATTTTATTTTTTGTTTCATCTACAAAATTTTACAGAGTATTGCACTGAAGATACAACGTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0010501 GO:0016043 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019843 GO:0022607 GO:0022613 GO:0031974 GO:0031981 GO:0034470 GO:0034622 GO:0034641 GO:0034660 GO:0042254 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0065003 GO:0070013 GO:0070035 GO:0070180 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0110102 GO:0140098 GO:1901259 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

530

Amino Acids

58.97

Weight (kDa)

9.24

Isoelectric Point (pI)

37.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	143 - 325	2.6e-38	DEAD/DEAH box helicase
Helicase_C	PF00271	362 - 473	4.5e-28	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G09730
fragaria_vesca	FvH4_2g12870 FvH4_2g12870 FvH4_2g12870 FvH4_2g12870
malus_domestica	MD05G1035500.v1.1 MD10G1037800.v1.1
prunus_persica	Prupe.8G043300_v2.0.a1
pyrus_communis	pycom05g02600 pycom10g02570
rosa_chinensis	RchiOBHm_Chr6g0273971
rosa_laevigata	RLG00000013588
rosa_multiflora	Rmu_sc0000045.1_g000081 Rmu_sc0013374.1_g000007
rosa_roxburghii	Rroxscaffold_7G00194840
rosa_rugosa	Rorug06G0077900
rosa_samantha	Rh6AG193500 Rh6BG197100 Rh6CG197000 Rh6DG188900
rosa_wichuraiana	Rw6G016870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	572
AarI	CACCTGC	1 cut(s)	622
Acc16I	TGCGCA	1 cut(s)	1013
Acc36I	ACCTGC	2 cut(s)	622, 1093
AccB1I	GGYRCC	2 cut(s)	246, 1231
AccI	GTMKAC	1 cut(s)	1341
AclI	AACGTT	1 cut(s)	1585
AclWI	GGATC	1 cut(s)	1188
AcoI	YGGCCR	1 cut(s)	919
AcsI	RAATTY	5 cut(s)	432, 1162, 1372, 1528, 1554
AcyI	GRCGYC	1 cut(s)	586
AfaI	GTAC	1 cut(s)	1396
AfiI	CCNNNNNNNGG	4 cut(s)	765, 1177, 1228, 1297
AflIII	ACRYGT	1 cut(s)	519
AjiI	CACGTC	1 cut(s)	68
AjnI	CCWGG	4 cut(s)	73, 119, 581, 760
AjuI	GAANNNNNNNTTGG	2 cut(s)	183, 215
AluBI	AGCT	5 cut(s)	538, 622, 1066, 1316, 1409
AluI	AGCT	5 cut(s)	538, 622, 1066, 1316, 1409
Alw21I	GWGCWC	1 cut(s)	287
Alw26I	GTCTC	4 cut(s)	74, 703, 827, 949
AlwI	GGATC	1 cut(s)	1188
AlwNI	CAGNNNCTG	1 cut(s)	541
Ama87I	CYCGRG	1 cut(s)	1109
AoxI	GGCC	3 cut(s)	140, 555, 919
ApeKI	GCWGC	4 cut(s)	11, 538, 1099, 1316
ApoI	RAATTY	5 cut(s)	432, 1162, 1372, 1528, 1554
ArsI	GACNNNNNNTTYG	2 cut(s)	842, 874
AspLEI	GCGC	1 cut(s)	1014
AspS9I	GGNCC	5 cut(s)	77, 556, 678, 756, 863
AsuHPI	GGTGA	2 cut(s)	818, 1238
AsuII	TTCGAA	1 cut(s)	908
AvaI	CYCGRG	1 cut(s)	1109
AvaII	GGWCC	4 cut(s)	77, 678, 756, 863
AxyI	CCTNAGG	1 cut(s)	714
BalI	TGGCCA	1 cut(s)	921
BanI	GGYRCC	2 cut(s)	246, 1231
BbsI	GAAGAC	1 cut(s)	192
Bbv12I	GWGCWC	1 cut(s)	287
BbvI	GCAGC	4 cut(s)	23, 525, 1086, 1303
BccI	CCATC	6 cut(s)	403, 669, 782, 911, 1081, 1274
BceAI	ACGGC	1 cut(s)	1155
BcgI	CGANNNNNNTGC	2 cut(s)	620, 654
BciT130I	CCWGG	4 cut(s)	75, 121, 583, 762
BcoDI	GTCTC	4 cut(s)	74, 703, 827, 949
BfaI	CTAG	5 cut(s)	615, 1313, 1328, 1445, 1497
BfmI	CTRYAG	1 cut(s)	1100
BfuAI	ACCTGC	2 cut(s)	622, 1093
BglII	AGATCT	1 cut(s)	1203
BisI	GCNGC	4 cut(s)	12, 539, 1100, 1317
BlsI	GCNGC	4 cut(s)	13, 540, 1101, 1318
Bme1390I	CCNGG	4 cut(s)	75, 121, 583, 762
Bme18I	GGWCC	4 cut(s)	77, 678, 756, 863
BmeT110I	CYCGRG	1 cut(s)	1109
BmgBI	CACGTC	1 cut(s)	68
BmgT120I	GGNCC	5 cut(s)	77, 556, 678, 756, 863
BmiI	GGNNCC	4 cut(s)	248, 757, 758, 1233
BmrFI	CCNGG	4 cut(s)	75, 121, 583, 762
BmrI	ACTGGG	1 cut(s)	504
BmsI	GCATC	1 cut(s)	1049
BmuI	ACTGGG	1 cut(s)	504
BoxI	GACNNNNGTC	1 cut(s)	476
BpiI	GAAGAC	1 cut(s)	192
Bpu10I	CCTNAGC	2 cut(s)	236, 242
Bpu14I	TTCGAA	1 cut(s)	908
BpuEI	CTTGAG	2 cut(s)	236, 248
BsaHI	GRCGYC	1 cut(s)	586
BsaI	GGTCTC	2 cut(s)	703, 949
BsaJI	CCNNGG	8 cut(s)	73, 120, 581, 760, 853, 922, 994, 1222
BsaWI	WCCGGW	1 cut(s)	1397
Bsc4I	CCNNNNNNNGG	4 cut(s)	765, 1177, 1228, 1297
Bse1I	ACTGG	1 cut(s)	499
Bse21I	CCTNAGG	1 cut(s)	714
Bse3DI	GCAATG	1 cut(s)	1094
BseBI	CCWGG	4 cut(s)	75, 121, 583, 762
BseDI	CCNNGG	8 cut(s)	73, 120, 581, 760, 853, 922, 994, 1222
BseGI	GGATG	4 cut(s)	556, 793, 1016, 1342
BseLI	CCNNNNNNNGG	4 cut(s)	765, 1177, 1228, 1297
BseMI	GCAATG	1 cut(s)	1094
BseMII	CTCAG	5 cut(s)	256, 533, 618, 728, 1068
BseNI	ACTGG	1 cut(s)	499
BseRI	GAGGAG	6 cut(s)	14, 17, 21, 34, 398, 1001
BseXI	GCAGC	4 cut(s)	23, 525, 1086, 1303
BseYI	CCCAGC	1 cut(s)	451
BsgI	GTGCAG	1 cut(s)	1288
BshFI	GGCC	3 cut(s)	142, 557, 921
BshNI	GGYRCC	2 cut(s)	246, 1231
BsiHKAI	GWGCWC	1 cut(s)	287
BsiHKCI	CYCGRG	1 cut(s)	1109
BsiSI	CCGG	1 cut(s)	1398
BslFI	GGGAC	4 cut(s)	156, 573, 769, 1338
BslI	CCNNNNNNNGG	4 cut(s)	765, 1177, 1228, 1297
BsmAI	GTCTC	4 cut(s)	74, 703, 827, 949
BsmBI	CGTCTC	1 cut(s)	74
BsmFI	GGGAC	4 cut(s)	156, 573, 769, 1338
BsmI	GAATGC	1 cut(s)	214
BsnI	GGCC	3 cut(s)	142, 557, 921
Bso31I	GGTCTC	2 cut(s)	703, 949
BsoBI	CYCGRG	1 cut(s)	1109
Bsp119I	TTCGAA	1 cut(s)	908
Bsp1286I	GDGCHC	1 cut(s)	287
Bsp143I	GATC	2 cut(s)	1180, 1203
BspANI	GGCC	3 cut(s)	142, 557, 921
BspCNI	CTCAG	5 cut(s)	255, 534, 619, 727, 1069
BspHI	TCATGA	1 cut(s)	1051
BspLI	GGNNCC	4 cut(s)	248, 757, 758, 1233
BspMAI	CTGCAG	1 cut(s)	1104
BspMI	ACCTGC	2 cut(s)	622, 1093
BspPI	GGATC	1 cut(s)	1188
BspT104I	TTCGAA	1 cut(s)	908
BspT107I	GGYRCC	2 cut(s)	246, 1231
BspTNI	GGTCTC	2 cut(s)	703, 949
BsrDI	GCAATG	1 cut(s)	1094
BsrI	ACTGG	1 cut(s)	499
BssECI	CCNNGG	8 cut(s)	73, 120, 581, 760, 853, 922, 994, 1222
BssMI	GATC	2 cut(s)	1180, 1203
BssNI	GRCGYC	1 cut(s)	586
BssT1I	CCWWGG	2 cut(s)	922, 994
Bst2UI	CCWGG	4 cut(s)	75, 121, 583, 762
Bst4CI	ACNGT	6 cut(s)	166, 475, 598, 854, 937, 1226
Bst6I	CTCTTC	1 cut(s)	59
BstACI	GRCGYC	1 cut(s)	586
BstBI	TTCGAA	1 cut(s)	908
BstC8I	GCNNGC	2 cut(s)	1236, 1411
BstDEI	CTNAG	6 cut(s)	236, 242, 542, 627, 714, 1077
BstDSI	CCRYGG	2 cut(s)	853, 1222
BstF5I	GGATG	4 cut(s)	556, 793, 1016, 1342
BstHHI	GCGC	1 cut(s)	1014
BstKTI	GATC	2 cut(s)	1183, 1206
BstMAI	GTCTC	4 cut(s)	74, 703, 827, 949
BstMBI	GATC	2 cut(s)	1180, 1203
BstMWI	GCNNNNNNNGC	1 cut(s)	628
BstNI	CCWGG	4 cut(s)	75, 121, 583, 762
BstNSI	RCATGY	1 cut(s)	523
BstPAI	GACNNNNGTC	1 cut(s)	476
BstSCI	CCNGG	4 cut(s)	73, 119, 581, 760
BstSFI	CTRYAG	1 cut(s)	1100
BstV1I	GCAGC	4 cut(s)	23, 525, 1086, 1303
BstV2I	GAAGAC	1 cut(s)	192
BstX2I	RGATCY	1 cut(s)	1203
BstYI	RGATCY	1 cut(s)	1203
Bsu36I	CCTNAGG	1 cut(s)	714
BsuRI	GGCC	3 cut(s)	142, 557, 921
BtgI	CCRYGG	2 cut(s)	853, 1222
BtrI	CACGTC	1 cut(s)	68
BtsCI	GGATG	4 cut(s)	556, 793, 1016, 1342
BtsI	GCAGTG	3 cut(s)	150, 462, 1022
BtsIMutI	CAGTG	5 cut(s)	150, 443, 462, 1022, 1571
BveI	ACCTGC	2 cut(s)	622, 1093
Cac8I	GCNNGC	2 cut(s)	1236, 1411
CaiI	CAGNNNCTG	1 cut(s)	541
CciI	TCATGA	1 cut(s)	1051
CfoI	GCGC	1 cut(s)	1014
Cfr13I	GGNCC	5 cut(s)	77, 556, 678, 756, 863
CseI	GACGC	1 cut(s)	575
Csp6I	GTAC	1 cut(s)	1395
CviAII	CATG	7 cut(s)	520, 665, 745, 1052, 1346, 1354, 1414
CviQI	GTAC	1 cut(s)	1395
DdeI	CTNAG	6 cut(s)	236, 242, 542, 627, 714, 1077
DpnI	GATC	2 cut(s)	1182, 1205
DpnII	GATC	2 cut(s)	1180, 1203
DraI	TTTAAA	2 cut(s)	1161, 1527
EaeI	YGGCCR	1 cut(s)	919
Eam1104I	CTCTTC	1 cut(s)	59
EarI	CTCTTC	1 cut(s)	59
Eco130I	CCWWGG	2 cut(s)	922, 994
Eco147I	AGGCCT	1 cut(s)	142
Eco31I	GGTCTC	2 cut(s)	703, 949
Eco47I	GGWCC	4 cut(s)	77, 678, 756, 863
Eco81I	CCTNAGG	1 cut(s)	714
Eco88I	CYCGRG	1 cut(s)	1109
EcoO109I	RGGNCCY	1 cut(s)	756
EcoRI	GAATTC	1 cut(s)	1372
EcoRII	CCWGG	4 cut(s)	73, 119, 581, 760
EcoT14I	CCWWGG	2 cut(s)	922, 994
ErhI	CCWWGG	2 cut(s)	922, 994
Esp3I	CGTCTC	1 cut(s)	74
FaeI	CATG	7 cut(s)	523, 668, 748, 1055, 1349, 1357, 1417
FalI	AAGNNNNNCTT	4 cut(s)	183, 215, 1416, 1448
FaqI	GGGAC	4 cut(s)	156, 573, 769, 1338
FatI	CATG	7 cut(s)	519, 664, 744, 1051, 1345, 1353, 1413
FblI	GTMKAC	1 cut(s)	1341
Fnu4HI	GCNGC	4 cut(s)	12, 539, 1100, 1317
FokI	GGATG	4 cut(s)	563, 800, 1003, 1349
Fsp4HI	GCNGC	4 cut(s)	12, 539, 1100, 1317
FspBI	CTAG	5 cut(s)	615, 1313, 1328, 1445, 1497
FspI	TGCGCA	1 cut(s)	1013
GlaI	GCGC	1 cut(s)	1013
GluI	GCNGC	4 cut(s)	12, 539, 1100, 1317
GsaI	CCCAGC	1 cut(s)	455
HaeIII	GGCC	3 cut(s)	142, 557, 921
HapII	CCGG	1 cut(s)	1398
HgaI	GACGC	1 cut(s)	575
HhaI	GCGC	1 cut(s)	1014
Hin1I	GRCGYC	1 cut(s)	586
Hin1II	CATG	7 cut(s)	523, 668, 748, 1055, 1349, 1357, 1417
Hin6I	GCGC	1 cut(s)	1012
HinP1I	GCGC	1 cut(s)	1012
HindIII	AAGCTT	1 cut(s)	1064
HinfI	GANTC	6 cut(s)	447, 672, 722, 769, 898, 927
HpaII	CCGG	1 cut(s)	1398
HphI	GGTGA	2 cut(s)	818, 1238
Hpy166II	GTNNAC	2 cut(s)	681, 1342
Hpy188I	TCNGA	5 cut(s)	628, 978, 1078, 1203, 1474
Hpy188III	TCNNGA	7 cut(s)	227, 253, 716, 866, 1052, 1109, 1270
Hpy8I	GTNNAC	2 cut(s)	681, 1342
HpyAV	CCTTC	4 cut(s)	458, 540, 759, 1397
HpyCH4III	ACNGT	6 cut(s)	166, 475, 598, 854, 937, 1226
HpyCH4IV	ACGT	2 cut(s)	67, 1585
HpyF10VI	GCNNNNNNNGC	1 cut(s)	628
HpyF3I	CTNAG	6 cut(s)	236, 242, 542, 627, 714, 1077
HpySE526I	ACGT	2 cut(s)	67, 1585
Hsp92I	GRCGYC	1 cut(s)	586
Hsp92II	CATG	7 cut(s)	523, 668, 748, 1055, 1349, 1357, 1417
HspAI	GCGC	1 cut(s)	1012
KflI	GGGWCCC	1 cut(s)	756
Kzo9I	GATC	2 cut(s)	1180, 1203
LmnI	GCTCC	1 cut(s)	8
Lsp1109I	GCAGC	4 cut(s)	23, 525, 1086, 1303
LweI	GCATC	1 cut(s)	1049
MaeI	CTAG	5 cut(s)	615, 1313, 1328, 1445, 1497
MaeII	ACGT	2 cut(s)	67, 1585
MaeIII	GTNAC	1 cut(s)	806
MalI	GATC	2 cut(s)	1182, 1205
MboI	GATC	2 cut(s)	1180, 1203
MboII	GAAGA	9 cut(s)	46, 197, 215, 352, 355, 764, 1045, 1413, 1588
MfeI	CAATTG	1 cut(s)	738
MflI	RGATCY	1 cut(s)	1203
MhlI	GDGCHC	1 cut(s)	287
MlsI	TGGCCA	1 cut(s)	921
MluCI	AATT	9 cut(s)	368, 432, 738, 1162, 1216, 1372, 1479, 1528, 1554
MluNI	TGGCCA	1 cut(s)	921
MmeI	TCCRAC	3 cut(s)	372, 441, 807
Mox20I	TGGCCA	1 cut(s)	921
MscI	TGGCCA	1 cut(s)	921
MseI	TTAA	7 cut(s)	128, 893, 1062, 1160, 1458, 1526, 1591
Msp20I	TGGCCA	1 cut(s)	921
MspA1I	CMGCKG	1 cut(s)	538
MspI	CCGG	1 cut(s)	1398
MspR9I	CCNGG	4 cut(s)	75, 121, 583, 762
MunI	CAATTG	1 cut(s)	738
Mva1269I	GAATGC	1 cut(s)	214
MvaI	CCWGG	4 cut(s)	75, 121, 583, 762
MwoI	GCNNNNNNNGC	1 cut(s)	628
NdeII	GATC	2 cut(s)	1180, 1203
NlaIII	CATG	7 cut(s)	523, 668, 748, 1055, 1349, 1357, 1417
NlaIV	GGNNCC	4 cut(s)	248, 757, 758, 1233
NmuCI	GTSAC	1 cut(s)	806
NsbI	TGCGCA	1 cut(s)	1013
NspI	RCATGY	1 cut(s)	523
NspV	TTCGAA	1 cut(s)	908
PaeR7I	CTCGAG	1 cut(s)	1109
PagI	TCATGA	1 cut(s)	1051
PaqCI	CACCTGC	1 cut(s)	622
PceI	AGGCCT	1 cut(s)	142
PciI	ACATGT	1 cut(s)	519
PctI	GAATGC	1 cut(s)	214
PfeI	GAWTC	6 cut(s)	447, 672, 722, 769, 898, 927
PkrI	GCNGC	4 cut(s)	13, 540, 1101, 1318
PpuMI	RGGWCCY	1 cut(s)	756
PscI	ACATGT	1 cut(s)	519
PshAI	GACNNNNGTC	1 cut(s)	476
PsiI	TTATAA	1 cut(s)	572
Psp1406I	AACGTT	1 cut(s)	1585
Psp5II	RGGWCCY	1 cut(s)	756
Psp6I	CCWGG	4 cut(s)	73, 119, 581, 760
PspFI	CCCAGC	1 cut(s)	451
PspGI	CCWGG	4 cut(s)	73, 119, 581, 760
PspN4I	GGNNCC	4 cut(s)	248, 757, 758, 1233
PspPI	GGNCC	5 cut(s)	77, 556, 678, 756, 863
PspPPI	RGGWCCY	1 cut(s)	756
PstI	CTGCAG	1 cut(s)	1104
PstNI	CAGNNNCTG	1 cut(s)	541
PsuI	RGATCY	1 cut(s)	1203
PvuII	CAGCTG	1 cut(s)	538
RsaI	GTAC	1 cut(s)	1396
RsaNI	GTAC	1 cut(s)	1395
SaqAI	TTAA	7 cut(s)	128, 893, 1062, 1160, 1458, 1526, 1591
SatI	GCNGC	4 cut(s)	12, 539, 1100, 1317
Sau3AI	GATC	2 cut(s)	1180, 1203
Sau96I	GGNCC	5 cut(s)	77, 556, 678, 756, 863
ScrFI	CCNGG	4 cut(s)	75, 121, 583, 762
SduI	GDGCHC	1 cut(s)	287
SfaNI	GCATC	1 cut(s)	1049
SfcI	CTRYAG	1 cut(s)	1100
Sfr274I	CTCGAG	1 cut(s)	1109
SfuI	TTCGAA	1 cut(s)	908
SinI	GGWCC	4 cut(s)	77, 678, 756, 863
SlaI	CTCGAG	1 cut(s)	1109
SmlI	CTYRAG	3 cut(s)	227, 251, 1109
SmoI	CTYRAG	3 cut(s)	227, 251, 1109
Sse9I	AATT	9 cut(s)	368, 432, 738, 1162, 1216, 1372, 1479, 1528, 1554
SseBI	AGGCCT	1 cut(s)	142
SspI	AATATT	1 cut(s)	1462
SspMI	CTAG	5 cut(s)	615, 1313, 1328, 1445, 1497
StuI	AGGCCT	1 cut(s)	142
StyD4I	CCNGG	4 cut(s)	73, 119, 581, 760
StyI	CCWWGG	2 cut(s)	922, 994
TaaI	ACNGT	6 cut(s)	166, 475, 598, 854, 937, 1226
TaiI	ACGT	2 cut(s)	70, 1588
TaqI	TCGA	3 cut(s)	908, 1110, 1380
TasI	AATT	9 cut(s)	368, 432, 738, 1162, 1216, 1372, 1479, 1528, 1554
TfiI	GAWTC	6 cut(s)	447, 672, 722, 769, 898, 927
Tru1I	TTAA	7 cut(s)	128, 893, 1062, 1160, 1458, 1526, 1591
Tru9I	TTAA	7 cut(s)	128, 893, 1062, 1160, 1458, 1526, 1591
TscAI	CASTG	5 cut(s)	157, 443, 462, 1029, 1578
TseFI	GTSAC	1 cut(s)	806
TseI	GCWGC	4 cut(s)	11, 538, 1099, 1316
Tsp45I	GTSAC	1 cut(s)	806
TspDTI	ATGAA	7 cut(s)	590, 643, 714, 1048, 1209, 1379, 1534
TspGWI	ACGGA	2 cut(s)	208, 210
TspRI	CASTG	5 cut(s)	157, 443, 462, 1029, 1578
VpaK11BI	GGWCC	4 cut(s)	77, 678, 756, 863
XapI	RAATTY	5 cut(s)	432, 1162, 1372, 1528, 1554
XceI	RCATGY	1 cut(s)	523
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1174
XhoI	CTCGAG	1 cut(s)	1109
XmiI	GTMKAC	1 cut(s)	1341
XspI	CTAG	5 cut(s)	615, 1313, 1328, 1445, 1497

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.