Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6A

Orthogroup ID

OG0010005

Physical Location & Seq

Genomic Coordinates Forward (+)

34632514 .. 34639891

Gene Structure 7378 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6AG193500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

ATGGGAGGAGCAGCAAAGACCCTCCTCACTCTATCTCTCTCCTCAAATCTCTTCACTCTCTCACGTCTCCCAGGACCAGCCACACGCTTCTCTCTCACAAAACTACCAAAACCCACCAGGGTTTTAACAGGGTTTAGGCCTCTTTGCACTGCCACAGCCACCGTTAGTCCCATTCAAGTTGAAGACCAAGACGGACTTCAACCCTTGAAGCATTCCGTGCTTCTTGAGAGGCTTAGGCTCAGGCACCTCAAGAACTCTACCAAACCACAAAACCCAACGAGCACAAAGTCGGTTGGGTATGGGGAGAGGCAGAGTGATGATAGGTCAGGGAATAAGAAGAAGATTGAGGTTGAGAGTTTTGAGGAATTGGGTGTGAGTGAGGAGGTGTTGGAGGCTTTGAGAGAGATGGGTATTCAAGTTCCTACTGAAATTCAGTGCATTGGAATCCCAGCAGTGTTGGAAGGCAAGACTGTGGTCTTGGGTTCTCATACTGGGTCTGGCAAGACTCTGGCTTACATGTTGCCTCTTGCACAGCTGCTGAGAAGGGATGAGGCCCAAAATGGTATTATAATGAAGCCCAGGCGTCCCCGAGCTGTTGTGCTATGCCCCACTAGAGAGCTGTCTGAGCAGGTGTTTCGTGTTGCCAAGTTCATCAGCCATCATGCAAGATTCAGGTCCACTATGGTAAGTGGTGGTGGTAGGTTGAGACCTCAGGAGGATTCATTGAATAACCCAATTGACATGGTAGTTGGGACCCCTGGAAGGATTCTTCAACATATTGAGGATGGCAACTTGGTTTATGGTGACATCAAATACTTGGTGTTGGACGAGGCAGATACTATGTTTGATCGTGGCTTTGGTCCAGACATTCGCAAGTTTCTTGCCCCATTAAAGAATCGTGCTTCGAAACCTGATGGCCAAGGATTCCAAACTGTTTTGGTCTCTGCCACAATGACAAAGGGAGTGCAAACTCTGATTGATGAGGAGTTCCAAGGAATACTACATTTGCGCACATCCTCACTGCATAAGAAGATTGCATCTGCTCGTCATGATTTCATTAAGCTTTCTGGTTCTGAGAACAAGATGGAAGCATTGCTGCAGGTTCTCGAGCCAAGTTTAGCAAAGGGAAACAGAGTAATGGTGTTCTGCAACACTTTAAATTCCAGCCGTGCTGTGGATCACTTTCTCAATGAAAATCAGATCTCAACTGCCAATTACCACGGTGAGGTGCCAGCAGAACAAAGGGTTGAAAACCTCAAAAAGTTCAAGAGTGATGATGGAGATTGCCCAACATTGGTCTGCACAGACCTAGCTGCAAGGGGACTAGACTTGGATGTAGACCATGTTATCATGTTTGATTTTCCCTTGAATTCTATCGACTACCTTCATCGTACCGGAAGAACAGCTCGCATGGGTGCAAAAGGTATACTTTTATTTCCACTAGCATTTTCTTTTAATATTTTTCTCTCTGGTGTAATTTCATCATCACTACTAGACTTACCAATCCATTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0010501 GO:0016043 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019843 GO:0022607 GO:0022613 GO:0031974 GO:0031981 GO:0034470 GO:0034622 GO:0034641 GO:0034660 GO:0042254 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0065003 GO:0070013 GO:0070035 GO:0070180 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0110102 GO:0140098 GO:1901259 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD Helicase_C

Protein Analysis

504

Amino Acids

55.61

Weight (kDa)

8.99

Isoelectric Point (pI)

38.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	142 - 324	3e-39	DEAD/DEAH box helicase
Helicase_C	PF00271	361 - 472	4.1e-28	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010005)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G09730
fragaria_vesca	FvH4_2g12870 FvH4_2g12870 FvH4_2g12870 FvH4_2g12870
malus_domestica	MD05G1035500.v1.1 MD10G1037800.v1.1
prunus_persica	Prupe.8G043300_v2.0.a1
pyrus_communis	pycom05g02600 pycom10g02570
rosa_chinensis	RchiOBHm_Chr6g0273971
rosa_laevigata	RLG00000013588
rosa_multiflora	Rmu_sc0000045.1_g000081 Rmu_sc0013374.1_g000007
rosa_roxburghii	Rroxscaffold_7G00194840
rosa_rugosa	Rorug06G0077900
rosa_samantha	Rh6AG193500 Rh6BG197100 Rh6CG197000 Rh6DG188900
rosa_wichuraiana	Rw6G016870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	569
AarI	CACCTGC	1 cut(s)	619
Acc16I	TGCGCA	1 cut(s)	1010
Acc36I	ACCTGC	2 cut(s)	619, 1090
AccB1I	GGYRCC	2 cut(s)	243, 1228
AccI	GTMKAC	2 cut(s)	1338, 1426
AclWI	GGATC	1 cut(s)	1185
AcoI	YGGCCR	1 cut(s)	916
AcsI	RAATTY	3 cut(s)	429, 1159, 1369
AcyI	GRCGYC	1 cut(s)	583
AfaI	GTAC	1 cut(s)	1393
AfiI	CCNNNNNNNGG	4 cut(s)	762, 1174, 1225, 1294
AflIII	ACRYGT	1 cut(s)	516
AjiI	CACGTC	1 cut(s)	65
AjnI	CCWGG	4 cut(s)	70, 116, 578, 757
AjuI	GAANNNNNNNTTGG	2 cut(s)	180, 212
AluBI	AGCT	6 cut(s)	535, 593, 619, 1063, 1313, 1406
AluI	AGCT	6 cut(s)	535, 593, 619, 1063, 1313, 1406
Alw21I	GWGCWC	1 cut(s)	284
Alw26I	GTCTC	3 cut(s)	71, 700, 946
AlwI	GGATC	1 cut(s)	1185
AlwNI	CAGNNNCTG	1 cut(s)	538
Ama87I	CYCGRG	2 cut(s)	588, 1106
AoxI	GGCC	3 cut(s)	137, 552, 916
ApeKI	GCWGC	4 cut(s)	11, 535, 1096, 1313
ApoI	RAATTY	3 cut(s)	429, 1159, 1369
AspLEI	GCGC	1 cut(s)	1011
AspS9I	GGNCC	5 cut(s)	74, 553, 675, 753, 860
AsuHPI	GGTGA	2 cut(s)	815, 1235
AsuII	TTCGAA	1 cut(s)	905
AvaI	CYCGRG	2 cut(s)	588, 1106
AvaII	GGWCC	4 cut(s)	74, 675, 753, 860
AxyI	CCTNAGG	1 cut(s)	711
BalI	TGGCCA	1 cut(s)	918
BanI	GGYRCC	2 cut(s)	243, 1228
BbsI	GAAGAC	1 cut(s)	189
Bbv12I	GWGCWC	1 cut(s)	284
BbvI	GCAGC	4 cut(s)	23, 522, 1083, 1300
BccI	CCATC	6 cut(s)	400, 666, 779, 908, 1078, 1271
BceAI	ACGGC	1 cut(s)	1152
BcgI	CGANNNNNNTGC	2 cut(s)	617, 651
BciT130I	CCWGG	4 cut(s)	72, 118, 580, 759
BcoDI	GTCTC	3 cut(s)	71, 700, 946
BfaI	CTAG	5 cut(s)	612, 1310, 1325, 1442, 1493
BfmI	CTRYAG	1 cut(s)	1097
BfuAI	ACCTGC	2 cut(s)	619, 1090
BglII	AGATCT	1 cut(s)	1200
BisI	GCNGC	4 cut(s)	12, 536, 1097, 1314
BlsI	GCNGC	4 cut(s)	13, 537, 1098, 1315
Bme1390I	CCNGG	4 cut(s)	72, 118, 580, 759
Bme18I	GGWCC	4 cut(s)	74, 675, 753, 860
BmeT110I	CYCGRG	2 cut(s)	588, 1106
BmgBI	CACGTC	1 cut(s)	65
BmgT120I	GGNCC	5 cut(s)	74, 553, 675, 753, 860
BmiI	GGNNCC	4 cut(s)	245, 754, 755, 1230
BmrFI	CCNGG	4 cut(s)	72, 118, 580, 759
BmrI	ACTGGG	1 cut(s)	501
BmsI	GCATC	1 cut(s)	1046
BmuI	ACTGGG	1 cut(s)	501
BoxI	GACNNNNGTC	1 cut(s)	473
BpiI	GAAGAC	1 cut(s)	189
Bpu10I	CCTNAGC	2 cut(s)	233, 239
Bpu14I	TTCGAA	1 cut(s)	905
BpuEI	CTTGAG	2 cut(s)	233, 245
BsaHI	GRCGYC	1 cut(s)	583
BsaI	GGTCTC	2 cut(s)	700, 946
BsaJI	CCNNGG	7 cut(s)	70, 117, 578, 757, 919, 991, 1219
BsaWI	WCCGGW	1 cut(s)	1394
Bsc4I	CCNNNNNNNGG	4 cut(s)	762, 1174, 1225, 1294
Bse1I	ACTGG	1 cut(s)	496
Bse21I	CCTNAGG	1 cut(s)	711
Bse3DI	GCAATG	1 cut(s)	1091
BseBI	CCWGG	4 cut(s)	72, 118, 580, 759
BseDI	CCNNGG	7 cut(s)	70, 117, 578, 757, 919, 991, 1219
BseGI	GGATG	4 cut(s)	553, 790, 1013, 1339
BseLI	CCNNNNNNNGG	4 cut(s)	762, 1174, 1225, 1294
BseMI	GCAATG	1 cut(s)	1091
BseMII	CTCAG	5 cut(s)	253, 530, 615, 725, 1065
BseNI	ACTGG	1 cut(s)	496
BseRI	GAGGAG	5 cut(s)	14, 21, 31, 395, 998
BseXI	GCAGC	4 cut(s)	23, 522, 1083, 1300
BseYI	CCCAGC	1 cut(s)	448
BsgI	GTGCAG	1 cut(s)	1285
BshFI	GGCC	3 cut(s)	139, 554, 918
BshNI	GGYRCC	2 cut(s)	243, 1228
BsiHKAI	GWGCWC	1 cut(s)	284
BsiHKCI	CYCGRG	2 cut(s)	588, 1106
BsiSI	CCGG	1 cut(s)	1395
BslFI	GGGAC	4 cut(s)	153, 570, 766, 1335
BslI	CCNNNNNNNGG	4 cut(s)	762, 1174, 1225, 1294
BsmAI	GTCTC	3 cut(s)	71, 700, 946
BsmBI	CGTCTC	1 cut(s)	71
BsmFI	GGGAC	4 cut(s)	153, 570, 766, 1335
BsmI	GAATGC	1 cut(s)	211
BsnI	GGCC	3 cut(s)	139, 554, 918
Bso31I	GGTCTC	2 cut(s)	700, 946
BsoBI	CYCGRG	2 cut(s)	588, 1106
Bsp119I	TTCGAA	1 cut(s)	905
Bsp1286I	GDGCHC	1 cut(s)	284
Bsp143I	GATC	3 cut(s)	847, 1177, 1200
BspANI	GGCC	3 cut(s)	139, 554, 918
BspCNI	CTCAG	5 cut(s)	252, 531, 616, 724, 1066
BspHI	TCATGA	1 cut(s)	1048
BspLI	GGNNCC	4 cut(s)	245, 754, 755, 1230
BspMAI	CTGCAG	1 cut(s)	1101
BspMI	ACCTGC	2 cut(s)	619, 1090
BspPI	GGATC	1 cut(s)	1185
BspT104I	TTCGAA	1 cut(s)	905
BspT107I	GGYRCC	2 cut(s)	243, 1228
BspTNI	GGTCTC	2 cut(s)	700, 946
BsrDI	GCAATG	1 cut(s)	1091
BsrI	ACTGG	1 cut(s)	496
BssECI	CCNNGG	7 cut(s)	70, 117, 578, 757, 919, 991, 1219
BssMI	GATC	3 cut(s)	847, 1177, 1200
BssNAI	GTATAC	1 cut(s)	1427
BssNI	GRCGYC	1 cut(s)	583
BssT1I	CCWWGG	2 cut(s)	919, 991
Bst1107I	GTATAC	1 cut(s)	1427
Bst2UI	CCWGG	4 cut(s)	72, 118, 580, 759
Bst4CI	ACNGT	4 cut(s)	163, 472, 934, 1223
Bst6I	CTCTTC	1 cut(s)	56
BstACI	GRCGYC	1 cut(s)	583
BstAPI	GCANNNNNTGC	1 cut(s)	217
BstBI	TTCGAA	1 cut(s)	905
BstC8I	GCNNGC	2 cut(s)	1233, 1408
BstDEI	CTNAG	6 cut(s)	233, 239, 539, 624, 711, 1074
BstDSI	CCRYGG	1 cut(s)	1219
BstF5I	GGATG	4 cut(s)	553, 790, 1013, 1339
BstHHI	GCGC	1 cut(s)	1011
BstKTI	GATC	3 cut(s)	850, 1180, 1203
BstMAI	GTCTC	3 cut(s)	71, 700, 946
BstMBI	GATC	3 cut(s)	847, 1177, 1200
BstMWI	GCNNNNNNNGC	2 cut(s)	217, 625
BstNI	CCWGG	4 cut(s)	72, 118, 580, 759
BstNSI	RCATGY	1 cut(s)	520
BstPAI	GACNNNNGTC	1 cut(s)	473
BstSCI	CCNGG	4 cut(s)	70, 116, 578, 757
BstSFI	CTRYAG	1 cut(s)	1097
BstV1I	GCAGC	4 cut(s)	23, 522, 1083, 1300
BstV2I	GAAGAC	1 cut(s)	189
BstX2I	RGATCY	1 cut(s)	1200
BstYI	RGATCY	1 cut(s)	1200
BstZ17I	GTATAC	1 cut(s)	1427
Bsu36I	CCTNAGG	1 cut(s)	711
BsuRI	GGCC	3 cut(s)	139, 554, 918
BtgI	CCRYGG	1 cut(s)	1219
BtrI	CACGTC	1 cut(s)	65
BtsCI	GGATG	4 cut(s)	553, 790, 1013, 1339
BtsI	GCAGTG	3 cut(s)	147, 459, 1019
BtsIMutI	CAGTG	4 cut(s)	147, 440, 459, 1019
BveI	ACCTGC	2 cut(s)	619, 1090
Cac8I	GCNNGC	2 cut(s)	1233, 1408
CaiI	CAGNNNCTG	1 cut(s)	538
CciI	TCATGA	1 cut(s)	1048
CfoI	GCGC	1 cut(s)	1011
Cfr13I	GGNCC	5 cut(s)	74, 553, 675, 753, 860
CseI	GACGC	1 cut(s)	572
Csp6I	GTAC	1 cut(s)	1392
CviAII	CATG	7 cut(s)	517, 662, 742, 1049, 1343, 1351, 1411
CviQI	GTAC	1 cut(s)	1392
DdeI	CTNAG	6 cut(s)	233, 239, 539, 624, 711, 1074
DpnI	GATC	3 cut(s)	849, 1179, 1202
DpnII	GATC	3 cut(s)	847, 1177, 1200
DraI	TTTAAA	1 cut(s)	1158
EaeI	YGGCCR	1 cut(s)	916
Eam1104I	CTCTTC	1 cut(s)	56
EarI	CTCTTC	1 cut(s)	56
Eco130I	CCWWGG	2 cut(s)	919, 991
Eco147I	AGGCCT	1 cut(s)	139
Eco31I	GGTCTC	2 cut(s)	700, 946
Eco47I	GGWCC	4 cut(s)	74, 675, 753, 860
Eco81I	CCTNAGG	1 cut(s)	711
Eco88I	CYCGRG	2 cut(s)	588, 1106
EcoO109I	RGGNCCY	1 cut(s)	753
EcoRI	GAATTC	1 cut(s)	1369
EcoRII	CCWGG	4 cut(s)	70, 116, 578, 757
EcoT14I	CCWWGG	2 cut(s)	919, 991
ErhI	CCWWGG	2 cut(s)	919, 991
Esp3I	CGTCTC	1 cut(s)	71
FaeI	CATG	7 cut(s)	520, 665, 745, 1052, 1346, 1354, 1414
FalI	AAGNNNNNCTT	4 cut(s)	180, 212, 1413, 1445
FaqI	GGGAC	4 cut(s)	153, 570, 766, 1335
FatI	CATG	7 cut(s)	516, 661, 741, 1048, 1342, 1350, 1410
FblI	GTMKAC	2 cut(s)	1338, 1426
Fnu4HI	GCNGC	4 cut(s)	12, 536, 1097, 1314
FokI	GGATG	4 cut(s)	560, 797, 1000, 1346
Fsp4HI	GCNGC	4 cut(s)	12, 536, 1097, 1314
FspBI	CTAG	5 cut(s)	612, 1310, 1325, 1442, 1493
FspI	TGCGCA	1 cut(s)	1010
GlaI	GCGC	1 cut(s)	1010
GluI	GCNGC	4 cut(s)	12, 536, 1097, 1314
GsaI	CCCAGC	1 cut(s)	452
HaeIII	GGCC	3 cut(s)	139, 554, 918
HapII	CCGG	1 cut(s)	1395
HgaI	GACGC	1 cut(s)	572
HhaI	GCGC	1 cut(s)	1011
Hin1I	GRCGYC	1 cut(s)	583
Hin1II	CATG	7 cut(s)	520, 665, 745, 1052, 1346, 1354, 1414
Hin6I	GCGC	1 cut(s)	1009
HinP1I	GCGC	1 cut(s)	1009
HindIII	AAGCTT	1 cut(s)	1061
HinfI	GANTC	7 cut(s)	444, 505, 669, 719, 766, 895, 924
HpaII	CCGG	1 cut(s)	1395
HphI	GGTGA	2 cut(s)	815, 1235
Hpy166II	GTNNAC	3 cut(s)	678, 1339, 1427
Hpy188I	TCNGA	4 cut(s)	625, 975, 1075, 1200
Hpy188III	TCNNGA	7 cut(s)	224, 250, 713, 863, 1049, 1106, 1267
Hpy8I	GTNNAC	3 cut(s)	678, 1339, 1427
HpyAV	CCTTC	4 cut(s)	455, 537, 756, 1394
HpyCH4III	ACNGT	4 cut(s)	163, 472, 934, 1223
HpyCH4IV	ACGT	1 cut(s)	64
HpyF10VI	GCNNNNNNNGC	2 cut(s)	217, 625
HpyF3I	CTNAG	6 cut(s)	233, 239, 539, 624, 711, 1074
HpySE526I	ACGT	1 cut(s)	64
Hsp92I	GRCGYC	1 cut(s)	583
Hsp92II	CATG	7 cut(s)	520, 665, 745, 1052, 1346, 1354, 1414
HspAI	GCGC	1 cut(s)	1009
KflI	GGGWCCC	1 cut(s)	753
Kzo9I	GATC	3 cut(s)	847, 1177, 1200
LmnI	GCTCC	1 cut(s)	8
Lsp1109I	GCAGC	4 cut(s)	23, 522, 1083, 1300
LweI	GCATC	1 cut(s)	1046
MaeI	CTAG	5 cut(s)	612, 1310, 1325, 1442, 1493
MaeII	ACGT	1 cut(s)	64
MaeIII	GTNAC	1 cut(s)	803
MalI	GATC	3 cut(s)	849, 1179, 1202
MboI	GATC	3 cut(s)	847, 1177, 1200
MboII	GAAGA	7 cut(s)	43, 194, 349, 352, 761, 1042, 1410
MfeI	CAATTG	1 cut(s)	735
MflI	RGATCY	1 cut(s)	1200
MhlI	GDGCHC	1 cut(s)	284
MlsI	TGGCCA	1 cut(s)	918
MluCI	AATT	7 cut(s)	365, 429, 735, 1159, 1213, 1369, 1476
MluNI	TGGCCA	1 cut(s)	918
MlyI	GAGTC	1 cut(s)	499
MmeI	TCCRAC	3 cut(s)	369, 438, 804
Mox20I	TGGCCA	1 cut(s)	918
MscI	TGGCCA	1 cut(s)	918
MseI	TTAA	5 cut(s)	125, 890, 1059, 1157, 1455
Msp20I	TGGCCA	1 cut(s)	918
MspA1I	CMGCKG	1 cut(s)	535
MspI	CCGG	1 cut(s)	1395
MspR9I	CCNGG	4 cut(s)	72, 118, 580, 759
MunI	CAATTG	1 cut(s)	735
Mva1269I	GAATGC	1 cut(s)	211
MvaI	CCWGG	4 cut(s)	72, 118, 580, 759
MwoI	GCNNNNNNNGC	2 cut(s)	217, 625
NdeII	GATC	3 cut(s)	847, 1177, 1200
NlaIII	CATG	7 cut(s)	520, 665, 745, 1052, 1346, 1354, 1414
NlaIV	GGNNCC	4 cut(s)	245, 754, 755, 1230
NmuCI	GTSAC	1 cut(s)	803
NsbI	TGCGCA	1 cut(s)	1010
NspI	RCATGY	1 cut(s)	520
NspV	TTCGAA	1 cut(s)	905
PaeR7I	CTCGAG	1 cut(s)	1106
PagI	TCATGA	1 cut(s)	1048
PaqCI	CACCTGC	1 cut(s)	619
PceI	AGGCCT	1 cut(s)	139
PciI	ACATGT	1 cut(s)	516
PctI	GAATGC	1 cut(s)	211
PfeI	GAWTC	6 cut(s)	444, 669, 719, 766, 895, 924
PkrI	GCNGC	4 cut(s)	13, 537, 1098, 1315
PleI	GAGTC	1 cut(s)	499
PpsI	GAGTC	1 cut(s)	499
PpuMI	RGGWCCY	1 cut(s)	753
PscI	ACATGT	1 cut(s)	516
PshAI	GACNNNNGTC	1 cut(s)	473
PsiI	TTATAA	1 cut(s)	569
Psp5II	RGGWCCY	1 cut(s)	753
Psp6I	CCWGG	4 cut(s)	70, 116, 578, 757
PspFI	CCCAGC	1 cut(s)	448
PspGI	CCWGG	4 cut(s)	70, 116, 578, 757
PspN4I	GGNNCC	4 cut(s)	245, 754, 755, 1230
PspPI	GGNCC	5 cut(s)	74, 553, 675, 753, 860
PspPPI	RGGWCCY	1 cut(s)	753
PstI	CTGCAG	1 cut(s)	1101
PstNI	CAGNNNCTG	1 cut(s)	538
PsuI	RGATCY	1 cut(s)	1200
PvuII	CAGCTG	1 cut(s)	535
RsaI	GTAC	1 cut(s)	1393
RsaNI	GTAC	1 cut(s)	1392
SaqAI	TTAA	5 cut(s)	125, 890, 1059, 1157, 1455
SatI	GCNGC	4 cut(s)	12, 536, 1097, 1314
Sau3AI	GATC	3 cut(s)	847, 1177, 1200
Sau96I	GGNCC	5 cut(s)	74, 553, 675, 753, 860
SchI	GAGTC	1 cut(s)	499
ScrFI	CCNGG	4 cut(s)	72, 118, 580, 759
SduI	GDGCHC	1 cut(s)	284
SfaNI	GCATC	1 cut(s)	1046
SfcI	CTRYAG	1 cut(s)	1097
Sfr274I	CTCGAG	1 cut(s)	1106
SfuI	TTCGAA	1 cut(s)	905
SinI	GGWCC	4 cut(s)	74, 675, 753, 860
SlaI	CTCGAG	1 cut(s)	1106
SmlI	CTYRAG	3 cut(s)	224, 248, 1106
SmoI	CTYRAG	3 cut(s)	224, 248, 1106
Sse9I	AATT	7 cut(s)	365, 429, 735, 1159, 1213, 1369, 1476
SseBI	AGGCCT	1 cut(s)	139
SspI	AATATT	1 cut(s)	1459
SspMI	CTAG	5 cut(s)	612, 1310, 1325, 1442, 1493
StuI	AGGCCT	1 cut(s)	139
StyD4I	CCNGG	4 cut(s)	70, 116, 578, 757
StyI	CCWWGG	2 cut(s)	919, 991
TaaI	ACNGT	4 cut(s)	163, 472, 934, 1223
TaiI	ACGT	1 cut(s)	67
TaqI	TCGA	3 cut(s)	905, 1107, 1377
TasI	AATT	7 cut(s)	365, 429, 735, 1159, 1213, 1369, 1476
TfiI	GAWTC	6 cut(s)	444, 669, 719, 766, 895, 924
Tru1I	TTAA	5 cut(s)	125, 890, 1059, 1157, 1455
Tru9I	TTAA	5 cut(s)	125, 890, 1059, 1157, 1455
TscAI	CASTG	4 cut(s)	154, 440, 459, 1026
TseFI	GTSAC	1 cut(s)	803
TseI	GCWGC	4 cut(s)	11, 535, 1096, 1313
Tsp45I	GTSAC	1 cut(s)	803
TspDTI	ATGAA	7 cut(s)	587, 640, 711, 1045, 1206, 1376, 1470
TspGWI	ACGGA	2 cut(s)	205, 207
TspRI	CASTG	4 cut(s)	154, 440, 459, 1026
VpaK11BI	GGWCC	4 cut(s)	74, 675, 753, 860
XapI	RAATTY	3 cut(s)	429, 1159, 1369
XceI	RCATGY	1 cut(s)	520
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1171
XhoI	CTCGAG	1 cut(s)	1106
XmiI	GTMKAC	2 cut(s)	1338, 1426
XspI	CTAG	5 cut(s)	612, 1310, 1325, 1442, 1493

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.