Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0003724

Physical Location & Seq

Genomic Coordinates Reverse (-)

8552062 .. 8559041

Gene Structure 6980 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1063300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2790 bp

ATGGGGGCAATTGGTGGGGAAGAGGTAGTGAAGTGGGAGAAGATGCAAGGAGCAAGTGCTCGCGAAGAGAAGATTCTGGTTTTGGTGAGGTTGAGGCCTCTGAGTGAGAAGGAGGTTGCAGCAAATGAAGTAGCAGATTGGGAATGCATCAACGACACAACCATCTTATACCGAAACACGCTGCGGGAAGGGTCTACATTTCCAACTGCCTATACATTTGACAAAGTATTTCGGGGTGATTGCTCTACAAGGCAGGTTTATGATGAAGGAGCCCAACAAATTGCTCTTTCAGTTGTCAATGGTATCAACTCAAGTATTTTCGCATATGGTCAAACAAGCAGTGGGAAAACGTACACCATGAATGGTATAACAGAGTTTACAGTAGCAGAAATATTTGACTATATACATGCGCATGAGGAACGAGCTTTTGTTGTTAAGTTTTCAGCAATTGAGATATACAATGAAGCTGTTAGAGACCTCCTAAGCACAGATAATACTCCACTTAGGCTGCTAGATGATCCTGAGCGGGGAACCATAATAGAGAAAATCACAGAGGAAACTCTGAGGGACTGGAGCCATTTAAAGGAACTCCTTTCTACTTGCGAAGCTCAAAGACAGATAGGGGAGACCGCATTAAACGAAAAAAGCTCTAGATCACATCAAATTATTAGATTGGCAATTGAAAGTTCTGCTCGTGAGTTCCTAGGCAAGGGCAATTCAACCACCCTTGCAGCTAGCGTGAACTTTGTGGACTTGGCAGGGAGCGAGCGTGCAGCCCAGGCATTATCAGCTGGGATGAGATTAAAAGAAGGCTGCCACATTAATCGCAGTTTACTAACTCTTAGCACTGTTATTCGCAAGCTAAGTAAAGGAAGGAATGGCCACGTCAATTACAGAGATTCAAAGCTAACACGCATACTGCAGCCTGCCTTGGGTGGTAATGCTAGAACAGCCATCATTTGCACTTTGAGCCCTGCACGAAGCCATGTTGAGCAAACAAGAAACACTCTTTTGTTTGCTTGTTGTGCAAAAGAAGTGACTACAAAAGCACAGGTCAATGTAGTCATGTCAGATAAGGCCCTGGTTAAACATTTACAGAAAGAGCTGGCTAGATTGGAGAGTGAGTTGAGGACACCTGGACCTCCTTCGTCAACTTGTGATTACCCAGCGTTGCTTAGAAAGAAAGATCTTCAGATTGAAAAGATGGACAAGGAAATTAGAGAGCTGAAAAAGCAACGTGATCTTGCTGAATCACGAGTGAAGGATTTACTGCGGATGGTTGGAAAGGATAACGATTCCAGACAACCTTCAGATAACCTTAATCCTAAATGGAATGCCGGGGATGTGTCAGATGATGAAGGCTCAGTATCATCAAGTGTGGCTGATCCTCATTATATGAATGGCGTCAGAAAATTCAGCAATCCTCATTTTGATGACAGAGACGGTGATGAGAGCAGTCCCGAGGAGGTATACGGACAGATTAATGAGAAGTTTAGATCTGATTCATGCCAGAGTCTAGAGTATCCCGCAGGTGGGACTGCAGAAGATACTGATGAATACTGCAAAGAAGTCCGCTGTATTGAGATGGAAGAGTCAAGCACAGACAATAATTCTGGATCCCTTGCTTTATCTACTGTTGAAAGTGAAGTAACATCTGGGGATACAAGTGTAGCAGGTCAAGAAATGATATCAACCCCAGTGAATGCAGATAGAGAAGGGAGTCAGATGCTAAGTGGTTTTACATATGGCACGTTGGAACAGAGACTACGTGATGTACAGATGACCATTGATTCTCTTGGTAATCCTTACCCTGAAAAACAATCTAGAAGCTTAAAGTTAACTAGGAGCTGGAGTTGTAGAGAAAATCTCATTGCCGGCTCATCTTCTCCGGATAAATCAGAGAGAACCCCACCTAATTGGTTTGAGAAAAGCTTTCCTGGGAGACCAGAAGGTTTTAGTGGGAGGAAGGTGCCCCTATTACATTATGATTCCAACGCAAGGTTGTCAAGAAATGATTCTCAATCTTCCCTTGGGAGTGCCGTGGATGAGTTAGGAGGACAGACTGCAGATGAGGATATTACCAGTGTTCGTACTTTTGTCACGGGACTAAAGAAAATGGCCAAAAATCTTGAGAATGACAGACAACTGGTCAACAGTCAGGACCAAGAGACGGGGGAAAAGTTTGAAAAGAAAGTGAAAGATGTAGGAGTAGATCCAATGCTGGAATTATCAGAAACTTCTGATTGGCCACTGGAATTTGAGAGACAGCAGAGGGCCATATTTGAACTTTGGCAAACTTGCCATATATCAGTGGTCCATCGAACCTACTTTTTCTTGCTCTTCAAAGGTGATCCAACAGATTCCATTTACATGGAGGTAGAACTTAGGAGACTATCTTTCCTCGAGGAAACTTTTTCCCGTGGAGATCAAGCTGTTGAAAATGGTCAGGCGCTCACACTCGCTTCAAGCATGAAAGCTATTGGTCGTGAGAGAGTAATGCTAAGCAAGCTGATGCAGAAAAGGTTTTCGGCAGAAGAGAGAAAGAGACTCTTCCAGCAGTGGGGTATTGCACTGGATTCAAAGCGCAGGAGGCTGCAGCTGGCCAACTGCTTGTGGAGTAACACAAATAATATGAACCACATTACAGAGAGCGCCGCCATTGTTGCAAAGCTGGTGATGTTCGTAGAGCAGGGGCAGGCCCTCAAGGGAATGTTCGGGCTTAGTTTTACACCCCCAAAAGCACGGCGTAGATCCTTTGGATGGAAAAATAGCATGGCATCCCTTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0005911 GO:0006928 GO:0007017 GO:0007018 GO:0008144 GO:0008150 GO:0009506 GO:0009987 GO:0015630 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0030054 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0032991 GO:0035371 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0055044 GO:0071944 GO:0097159 GO:0097367 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:1901265 GO:1901363 GO:1990752

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3490 Kinesin

Protein Analysis

930

Amino Acids

104.12

Weight (kDa)

5.84

Isoelectric Point (pI)

49.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	24 - 161	4.2e-21	Microtubule binding
Kinesin	PF00225	30 - 346	1.3e-96	Kinesin motor domain
DUF3490	PF11995	752 - 911	4.4e-75	Domain of unknown function (DUF3490)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003724)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21300 AT2G21300 AT2G21300 AT2G21300 AT2G21300 AT4G38950 AT4G38950 AT4G38950 AT4G38950 AT4G38950
fragaria_vesca	FvH4_2g10420 FvH4_4g06160
malus_domestica	MD00G1086100.v1.1 MD10G1063300.v1.1
prunus_persica	Prupe.8G084900_v2.0.a1 Prupe.8G084900_v2.0.a1 Prupe.8G084900_v2.0.a1 Prupe.8G084900_v2.0.a1 Prupe.8G084900_v2.0.a1
pyrus_communis	pycom05g04640 pycom10g04890
rosa_chinensis	RchiOBHm_Chr6g0267891
rosa_laevigata	RLG00000013970
rosa_multiflora	Rmu_sc0000434.1_g000005 Rmu_sc0005400.1_g000005
rosa_roxburghii	Rroxscaffold_7G00200350
rosa_rugosa	Rorug06G0034600 Rorug06G0034600 Rorug06G0034600
rosa_samantha	Rh6AG156800 Rh6BG158000 Rh6CG158200 Rh6DG143200
rosa_wichuraiana	Rw6G013620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1520
AbsI	CCTCGAGG	1 cut(s)	2402
Acc16I	TGCGCA	1 cut(s)	411
Acc36I	ACCTGC	3 cut(s)	244, 1520, 1664
AccB1I	GGYRCC	1 cut(s)	1969
AccBSI	CCGCTC	1 cut(s)	526
AccI	GTMKAC	2 cut(s)	194, 1470
AccII	CGCG	1 cut(s)	63
AccIII	TCCGGA	1 cut(s)	1888
AciI	CCGC	7 cut(s)	184, 526, 630, 1273, 1527, 1573, 2655
AclWI	GGATC	7 cut(s)	512, 1379, 1611, 1624, 2207, 2345, 2745
AcoI	YGGCCR	4 cut(s)	880, 2118, 2246, 2601
AcsI	RAATTY	2 cut(s)	1412, 2255
AcuI	CTGAAG	2 cut(s)	1175, 1293
AcyI	GRCGYC	1 cut(s)	1404
AfaI	GTAC	3 cut(s)	353, 1776, 2092
AhdI	GACNNNNNGTC	1 cut(s)	2147
AjiI	CACGTC	1 cut(s)	886
AjnI	CCWGG	4 cut(s)	777, 1080, 1135, 1936
Alw21I	GWGCWC	1 cut(s)	61
Alw26I	GTCTC	9 cut(s)	468, 620, 1434, 1756, 1936, 2162, 2257, 2383, 2539
AlwI	GGATC	7 cut(s)	512, 1379, 1611, 1624, 2207, 2345, 2745
Ama87I	CYCGRG	2 cut(s)	1460, 2402
Aor13HI	TCCGGA	1 cut(s)	1888
AoxI	GGCC	8 cut(s)	95, 880, 1077, 2118, 2246, 2274, 2601, 2697
ApeKI	GCWGC	9 cut(s)	119, 181, 508, 731, 773, 813, 922, 2593, 2596
ApoI	RAATTY	2 cut(s)	1412, 2255
AseI	ATTAAT	2 cut(s)	822, 1482
Asp700I	GAANNNNTTC	1 cut(s)	2014
AspA2I	CCTAGG	1 cut(s)	703
AspLEI	GCGC	4 cut(s)	412, 2452, 2586, 2654
AspS9I	GGNCC	6 cut(s)	1078, 1139, 2161, 2274, 2314, 2698
AsuC2I	CCSGG	1 cut(s)	1339
AsuHPI	GGTGA	5 cut(s)	97, 248, 1457, 2360, 2686
AsuNHI	GCTAGC	1 cut(s)	734
AvaI	CYCGRG	2 cut(s)	1460, 2402
AvaII	GGWCC	3 cut(s)	1139, 2161, 2314
AvrII	CCTAGG	1 cut(s)	703
BaeGI	GKGCMC	1 cut(s)	1974
BaeI	ACNNNNGTAYC	2 cut(s)	1653, 1686
BalI	TGGCCA	4 cut(s)	882, 2120, 2248, 2603
BamHI	GGATCC	1 cut(s)	1616
BanI	GGYRCC	1 cut(s)	1969
BanII	GRGCYC	2 cut(s)	274, 974
BauI	CACGAG	2 cut(s)	693, 1254
Bbv12I	GWGCWC	1 cut(s)	61
BbvI	GCAGC	9 cut(s)	131, 168, 495, 743, 785, 800, 934, 2580, 2608
BccI	CCATC	7 cut(s)	170, 962, 1198, 1270, 1579, 2325, 2754
BceAI	ACGGC	2 cut(s)	2024, 2759
BciT130I	CCWGG	4 cut(s)	779, 1082, 1137, 1938
BciVI	GTATCC	2 cut(s)	1533, 1654
BcnI	CCSGG	1 cut(s)	1339
BcoDI	GTCTC	9 cut(s)	468, 620, 1434, 1756, 1936, 2162, 2257, 2383, 2539
BfaI	CTAG	9 cut(s)	512, 651, 704, 735, 945, 1110, 1517, 1824, 1842
BfmI	CTRYAG	4 cut(s)	920, 1539, 2064, 2594
BfoI	RGCGCY	2 cut(s)	2453, 2655
BfuAI	ACCTGC	3 cut(s)	244, 1520, 1664
BfuI	GTATCC	2 cut(s)	1533, 1654
BglII	AGATCT	2 cut(s)	1186, 1496
BlnI	CCTAGG	1 cut(s)	703
BlpI	GCTNAGC	1 cut(s)	2501
Bme1390I	CCNGG	5 cut(s)	779, 1082, 1137, 1339, 1938
Bme18I	GGWCC	3 cut(s)	1139, 2161, 2314
BmeRI	GACNNNNNGTC	1 cut(s)	2147
BmeT110I	CYCGRG	2 cut(s)	1460, 2402
BmgBI	CACGTC	1 cut(s)	886
BmgT120I	GGNCC	6 cut(s)	1078, 1139, 2161, 2274, 2314, 2698
BmiI	GGNNCC	5 cut(s)	271, 532, 575, 1618, 1971
BmrFI	CCNGG	5 cut(s)	779, 1082, 1137, 1339, 1938
BmrI	ACTGGG	1 cut(s)	1691
BmsI	GCATC	5 cut(s)	33, 156, 1716, 2502, 2786
BmtI	GCTAGC	1 cut(s)	738
BmuI	ACTGGG	1 cut(s)	1691
BplI	GAGNNNNNCTC	2 cut(s)	1851, 1883
BpmI	CTGGAG	2 cut(s)	592, 1870
Bpu10I	CCTNAGC	2 cut(s)	482, 522
Bpu1102I	GCTNAGC	1 cut(s)	2501
BpuEI	CTTGAG	3 cut(s)	295, 2150, 2687
BpuMI	CCSGG	1 cut(s)	1339
BsaAI	YACGTR	1 cut(s)	1769
BsaHI	GRCGYC	1 cut(s)	1404
BsaI	GGTCTC	3 cut(s)	468, 620, 1936
BsaWI	WCCGGW	1 cut(s)	1888
BsaXI	ACNNNNNCTCC	6 cut(s)	754, 784, 1109, 1139, 1837, 1867
Bse118I	RCCGGY	1 cut(s)	1874
Bse1I	ACTGG	6 cut(s)	575, 1697, 2082, 2151, 2256, 2577
Bse3DI	GCAATG	1 cut(s)	1869
BseAI	TCCGGA	1 cut(s)	1888
BseBI	CCWGG	4 cut(s)	779, 1082, 1137, 1938
BseGI	GGATG	6 cut(s)	801, 1281, 1348, 2050, 2765, 2777
BseMI	GCAATG	1 cut(s)	1869
BseMII	CTCAG	4 cut(s)	92, 513, 554, 1377
BseNI	ACTGG	6 cut(s)	575, 1697, 2082, 2151, 2256, 2577
BseRI	GAGGAG	1 cut(s)	1478
BseSI	GKGCMC	1 cut(s)	1974
BseXI	GCAGC	9 cut(s)	131, 168, 495, 743, 785, 800, 934, 2580, 2608
BseYI	CCCAGC	2 cut(s)	791, 1165
BsgI	GTGCAG	2 cut(s)	792, 960
Bsh1236I	CGCG	1 cut(s)	63
BshFI	GGCC	8 cut(s)	97, 882, 1079, 2120, 2248, 2276, 2603, 2699
BshNI	GGYRCC	1 cut(s)	1969
BsiHKAI	GWGCWC	1 cut(s)	61
BsiHKCI	CYCGRG	2 cut(s)	1460, 2402
BsiSI	CCGG	3 cut(s)	1338, 1875, 1889
BslFI	GGGAC	4 cut(s)	581, 1443, 1549, 2118
BsmAI	GTCTC	9 cut(s)	468, 620, 1434, 1756, 1936, 2162, 2257, 2383, 2539
BsmBI	CGTCTC	2 cut(s)	1434, 2162
BsmFI	GGGAC	4 cut(s)	581, 1443, 1549, 2118
BsmI	GAATGC	3 cut(s)	149, 1339, 1708
BsnI	GGCC	8 cut(s)	97, 882, 1079, 2120, 2248, 2276, 2603, 2699
Bso31I	GGTCTC	3 cut(s)	468, 620, 1936
BsoBI	CYCGRG	2 cut(s)	1460, 2402
Bsp1286I	GDGCHC	4 cut(s)	61, 274, 974, 1974
Bsp13I	TCCGGA	1 cut(s)	1888
Bsp1407I	TGTACA	1 cut(s)	1774
Bsp1720I	GCTNAGC	1 cut(s)	2501
Bsp68I	TCGCGA	1 cut(s)	63
BspACI	CCGC	7 cut(s)	184, 526, 630, 1273, 1527, 1573, 2655
BspANI	GGCC	8 cut(s)	97, 882, 1079, 2120, 2248, 2276, 2603, 2699
BspCNI	CTCAG	4 cut(s)	93, 514, 555, 1376
BspEI	TCCGGA	1 cut(s)	1888
BspFNI	CGCG	1 cut(s)	63
BspLI	GGNNCC	5 cut(s)	271, 532, 575, 1618, 1971
BspMAI	CTGCAG	4 cut(s)	924, 1543, 2068, 2598
BspMI	ACCTGC	3 cut(s)	244, 1520, 1664
BspOI	GCTAGC	1 cut(s)	738
BspPI	GGATC	7 cut(s)	512, 1379, 1611, 1624, 2207, 2345, 2745
BspQI	GCTCTTC	1 cut(s)	2345
BspT107I	GGYRCC	1 cut(s)	1969
BspTNI	GGTCTC	3 cut(s)	468, 620, 1936
BsrBI	CCGCTC	1 cut(s)	526
BsrDI	GCAATG	1 cut(s)	1869
BsrFI	RCCGGY	1 cut(s)	1874
BsrGI	TGTACA	1 cut(s)	1774
BsrI	ACTGG	6 cut(s)	575, 1697, 2082, 2151, 2256, 2577
BssAI	RCCGGY	1 cut(s)	1874
BssNAI	GTATAC	1 cut(s)	1471
BssNI	GRCGYC	1 cut(s)	1404
BssSI	CACGAG	2 cut(s)	693, 1254
BssT1I	CCWWGG	3 cut(s)	703, 930, 2029
Bst1107I	GTATAC	1 cut(s)	1471
Bst2BI	CACGAG	2 cut(s)	693, 1254
Bst2UI	CCWGG	4 cut(s)	779, 1082, 1137, 1938
Bst4CI	ACNGT	5 cut(s)	382, 850, 1445, 1636, 2156
Bst6I	CTCTTC	6 cut(s)	15, 60, 1584, 2345, 2529, 2555
BstACI	GRCGYC	1 cut(s)	1404
BstAUI	TGTACA	1 cut(s)	1774
BstBAI	YACGTR	1 cut(s)	1769
BstDSI	CCRYGG	2 cut(s)	2040, 2419
BstENI	CCTNNNNNAGG	1 cut(s)	707
BstF5I	GGATG	6 cut(s)	801, 1281, 1348, 2050, 2765, 2777
BstFNI	CGCG	1 cut(s)	63
BstH2I	RGCGCY	2 cut(s)	2453, 2655
BstHHI	GCGC	4 cut(s)	412, 2452, 2586, 2654
BstMAI	GTCTC	9 cut(s)	468, 620, 1434, 1756, 1936, 2162, 2257, 2383, 2539
BstMWI	GCNNNNNNNGC	9 cut(s)	779, 788, 950, 969, 1025, 1231, 2506, 2590, 2663
BstNI	CCWGG	4 cut(s)	779, 1082, 1137, 1938
BstNSI	RCATGY	1 cut(s)	410
BstSCI	CCNGG	5 cut(s)	777, 1080, 1135, 1337, 1936
BstSFI	CTRYAG	4 cut(s)	920, 1539, 2064, 2594
BstSLI	GKGCMC	1 cut(s)	1974
BstUI	CGCG	1 cut(s)	63
BstV1I	GCAGC	9 cut(s)	131, 168, 495, 743, 785, 800, 934, 2580, 2608
BstX2I	RGATCY	5 cut(s)	1186, 1496, 1616, 2212, 2750
BstXI	CCANNNNNNTGG	2 cut(s)	1917, 2371
BstYI	RGATCY	5 cut(s)	1186, 1496, 1616, 2212, 2750
BstZ17I	GTATAC	1 cut(s)	1471
BsuI	GTATCC	2 cut(s)	1533, 1654
BsuRI	GGCC	8 cut(s)	97, 882, 1079, 2120, 2248, 2276, 2603, 2699
BtgI	CCRYGG	2 cut(s)	2040, 2419
BtrI	CACGTC	1 cut(s)	886
BtsCI	GGATG	6 cut(s)	801, 1281, 1348, 2050, 2765, 2777
BtsI	GCAGTG	2 cut(s)	346, 2564
BtsIMutI	CAGTG	8 cut(s)	346, 846, 1704, 2089, 2249, 2316, 2564, 2570
BtuMI	TCGCGA	1 cut(s)	63
BveI	ACCTGC	3 cut(s)	244, 1520, 1664
CfoI	GCGC	4 cut(s)	412, 2452, 2586, 2654
Cfr10I	RCCGGY	1 cut(s)	1874
Cfr13I	GGNCC	6 cut(s)	1078, 1139, 2161, 2274, 2314, 2698
CseI	GACGC	1 cut(s)	1393
Csp6I	GTAC	3 cut(s)	352, 1775, 2091
CviAII	CATG	9 cut(s)	358, 407, 413, 986, 1066, 1506, 2371, 2470, 2773
CviQI	GTAC	3 cut(s)	352, 1775, 2091
DraI	TTTAAA	1 cut(s)	582
DriI	GACNNNNNGTC	1 cut(s)	2147
EaeI	YGGCCR	4 cut(s)	880, 2118, 2246, 2601
Eam1104I	CTCTTC	6 cut(s)	15, 60, 1584, 2345, 2529, 2555
Eam1105I	GACNNNNNGTC	1 cut(s)	2147
EarI	CTCTTC	6 cut(s)	15, 60, 1584, 2345, 2529, 2555
Eco130I	CCWWGG	3 cut(s)	703, 930, 2029
Eco147I	AGGCCT	1 cut(s)	97
Eco24I	GRGCYC	2 cut(s)	274, 974
Eco31I	GGTCTC	3 cut(s)	468, 620, 1936
Eco32I	GATATC	1 cut(s)	1689
Eco47I	GGWCC	3 cut(s)	1139, 2161, 2314
Eco57I	CTGAAG	2 cut(s)	1175, 1293
Eco88I	CYCGRG	2 cut(s)	1460, 2402
EcoNI	CCTNNNNNAGG	1 cut(s)	707
EcoO109I	RGGNCCY	2 cut(s)	1078, 2698
EcoRII	CCWGG	4 cut(s)	777, 1080, 1135, 1936
EcoRV	GATATC	1 cut(s)	1689
EcoT14I	CCWWGG	3 cut(s)	703, 930, 2029
EcoT22I	ATGCAT	1 cut(s)	149
EcoT38I	GRGCYC	2 cut(s)	274, 974
ErhI	CCWWGG	3 cut(s)	703, 930, 2029
Esp3I	CGTCTC	2 cut(s)	1434, 2162
FaeI	CATG	9 cut(s)	361, 410, 416, 989, 1069, 1509, 2374, 2473, 2776
FalI	AAGNNNNNCTT	2 cut(s)	2534, 2566
FaqI	GGGAC	4 cut(s)	581, 1443, 1549, 2118
FatI	CATG	9 cut(s)	357, 406, 412, 985, 1065, 1505, 2370, 2469, 2772
FauI	CCCGC	3 cut(s)	177, 519, 1534
FauNDI	CATATG	2 cut(s)	325, 1744
FblI	GTMKAC	2 cut(s)	194, 1470
FokI	GGATG	6 cut(s)	808, 1288, 1355, 2057, 2764, 2772
FriOI	GRGCYC	2 cut(s)	274, 974
FspAI	RTGCGCAY	1 cut(s)	411
FspBI	CTAG	9 cut(s)	512, 651, 704, 735, 945, 1110, 1517, 1824, 1842
FspI	TGCGCA	1 cut(s)	411
GlaI	GCGC	4 cut(s)	411, 2451, 2585, 2653
GsaI	CCCAGC	2 cut(s)	795, 1169
GsuI	CTGGAG	2 cut(s)	592, 1870
HaeII	RGCGCY	2 cut(s)	2453, 2655
HaeIII	GGCC	8 cut(s)	97, 882, 1079, 2120, 2248, 2276, 2603, 2699
HapII	CCGG	3 cut(s)	1338, 1875, 1889
HgaI	GACGC	1 cut(s)	1393
HhaI	GCGC	4 cut(s)	412, 2452, 2586, 2654
Hin1I	GRCGYC	1 cut(s)	1404
Hin1II	CATG	9 cut(s)	361, 410, 416, 989, 1069, 1509, 2374, 2473, 2776
Hin6I	GCGC	4 cut(s)	410, 2450, 2584, 2652
HinP1I	GCGC	4 cut(s)	410, 2450, 2584, 2652
HincII	GTYRAC	3 cut(s)	1152, 1839, 2152
HindII	GTYRAC	3 cut(s)	1152, 1839, 2152
HindIII	AAGCTT	2 cut(s)	1828, 1930
HpaI	GTTAAC	1 cut(s)	1839
HpaII	CCGG	3 cut(s)	1338, 1875, 1889
HphI	GGTGA	5 cut(s)	97, 248, 1457, 2360, 2686
HpyCH4III	ACNGT	5 cut(s)	382, 850, 1445, 1636, 2156
HpyCH4IV	ACGT	5 cut(s)	350, 885, 1237, 1751, 1768
HpyF10VI	GCNNNNNNNGC	9 cut(s)	779, 788, 950, 969, 1025, 1231, 2506, 2590, 2663
HpySE526I	ACGT	5 cut(s)	350, 885, 1237, 1751, 1768
Hsp92I	GRCGYC	1 cut(s)	1404
Hsp92II	CATG	9 cut(s)	361, 410, 416, 989, 1069, 1509, 2374, 2473, 2776
HspAI	GCGC	4 cut(s)	410, 2450, 2584, 2652
Kpn2I	TCCGGA	1 cut(s)	1888
KroI	GCCGGC	1 cut(s)	1874
KroNI	GCCGGC	1 cut(s)	1876
KspAI	GTTAAC	1 cut(s)	1839
LguI	GCTCTTC	1 cut(s)	2345
LmnI	GCTCC	5 cut(s)	50, 269, 573, 762, 1845
Lsp1109I	GCAGC	9 cut(s)	131, 168, 495, 743, 785, 800, 934, 2580, 2608
LweI	GCATC	5 cut(s)	33, 156, 1716, 2502, 2786
MaeI	CTAG	9 cut(s)	512, 651, 704, 735, 945, 1110, 1517, 1824, 1842
MaeII	ACGT	5 cut(s)	350, 885, 1237, 1751, 1768
MaeIII	GTNAC	4 cut(s)	1036, 1648, 2098, 2618
MbiI	CCGCTC	1 cut(s)	526
MfeI	CAATTG	3 cut(s)	9, 447, 678
MflI	RGATCY	5 cut(s)	1186, 1496, 1616, 2212, 2750
MhlI	GDGCHC	4 cut(s)	61, 274, 974, 1974
MlsI	TGGCCA	4 cut(s)	882, 2120, 2248, 2603
MluNI	TGGCCA	4 cut(s)	882, 2120, 2248, 2603
MlyI	GAGTC	4 cut(s)	1522, 1601, 1729, 2541
MmeI	TCCRAC	5 cut(s)	227, 1261, 1734, 2016, 2378
Mox20I	TGGCCA	4 cut(s)	882, 2120, 2248, 2603
Mph1103I	ATGCAT	1 cut(s)	149
MroI	TCCGGA	1 cut(s)	1888
MroNI	GCCGGC	1 cut(s)	1874
MroXI	GAANNNNTTC	1 cut(s)	2014
MscI	TGGCCA	4 cut(s)	882, 2120, 2248, 2603
MslI	CAYNNNNRTG	3 cut(s)	411, 1431, 2369
Msp20I	TGGCCA	4 cut(s)	882, 2120, 2248, 2603
MspA1I	CMGCKG	3 cut(s)	791, 1575, 2599
MspI	CCGG	3 cut(s)	1338, 1875, 1889
MspR9I	CCNGG	5 cut(s)	779, 1082, 1137, 1339, 1938
MunI	CAATTG	3 cut(s)	9, 447, 678
Mva1269I	GAATGC	3 cut(s)	149, 1339, 1708
MvaI	CCWGG	4 cut(s)	779, 1082, 1137, 1938
MvnI	CGCG	1 cut(s)	63
MwoI	GCNNNNNNNGC	9 cut(s)	779, 788, 950, 969, 1025, 1231, 2506, 2590, 2663
NaeI	GCCGGC	1 cut(s)	1876
NciI	CCSGG	1 cut(s)	1339
NdeI	CATATG	2 cut(s)	325, 1744
NgoMIV	GCCGGC	1 cut(s)	1874
NheI	GCTAGC	1 cut(s)	734
NlaIII	CATG	9 cut(s)	361, 410, 416, 989, 1069, 1509, 2374, 2473, 2776
NlaIV	GGNNCC	5 cut(s)	271, 532, 575, 1618, 1971
NmuCI	GTSAC	2 cut(s)	1036, 2098
NruI	TCGCGA	1 cut(s)	63
NsbI	TGCGCA	1 cut(s)	411
NsiI	ATGCAT	1 cut(s)	149
NspI	RCATGY	1 cut(s)	410
PaeR7I	CTCGAG	1 cut(s)	2402
PaqCI	CACCTGC	1 cut(s)	1520
PceI	AGGCCT	1 cut(s)	97
PciSI	GCTCTTC	1 cut(s)	2345
PctI	GAATGC	3 cut(s)	149, 1339, 1708
PdiI	GCCGGC	1 cut(s)	1876
PdmI	GAANNNNTTC	1 cut(s)	2014
PleI	GAGTC	4 cut(s)	1521, 1600, 1728, 2541
PpsI	GAGTC	4 cut(s)	1521, 1600, 1728, 2541
Ppu21I	YACGTR	1 cut(s)	1769
PshBI	ATTAAT	2 cut(s)	822, 1482
Psp6I	CCWGG	4 cut(s)	777, 1080, 1135, 1936
PspFI	CCCAGC	2 cut(s)	791, 1165
PspGI	CCWGG	4 cut(s)	777, 1080, 1135, 1936
PspN4I	GGNNCC	5 cut(s)	271, 532, 575, 1618, 1971
PspPI	GGNCC	6 cut(s)	1078, 1139, 2161, 2274, 2314, 2698
PspXI	VCTCGAGB	1 cut(s)	2402
PsrI	GAACNNNNNNTAC	2 cut(s)	1749, 1781
PstI	CTGCAG	4 cut(s)	924, 1543, 2068, 2598
PsuI	RGATCY	5 cut(s)	1186, 1496, 1616, 2212, 2750
PvuII	CAGCTG	2 cut(s)	791, 2599
RruI	TCGCGA	1 cut(s)	63
RsaI	GTAC	3 cut(s)	353, 1776, 2092
RsaNI	GTAC	3 cut(s)	352, 1775, 2091
RseI	CAYNNNNRTG	3 cut(s)	411, 1431, 2369
SapI	GCTCTTC	1 cut(s)	2345
Sau96I	GGNCC	6 cut(s)	1078, 1139, 2161, 2274, 2314, 2698
SchI	GAGTC	4 cut(s)	1522, 1601, 1729, 2541
ScrFI	CCNGG	5 cut(s)	779, 1082, 1137, 1339, 1938
SduI	GDGCHC	4 cut(s)	61, 274, 974, 1974
SfaNI	GCATC	5 cut(s)	33, 156, 1716, 2502, 2786
SfcI	CTRYAG	4 cut(s)	920, 1539, 2064, 2594
Sfr274I	CTCGAG	1 cut(s)	2402
SinI	GGWCC	3 cut(s)	1139, 2161, 2314
SlaI	CTCGAG	1 cut(s)	2402
SmiMI	CAYNNNNRTG	3 cut(s)	411, 1431, 2369
SmlI	CTYRAG	4 cut(s)	310, 2129, 2402, 2702
SmoI	CTYRAG	4 cut(s)	310, 2129, 2402, 2702
SseBI	AGGCCT	1 cut(s)	97
SsiI	CCGC	7 cut(s)	184, 526, 630, 1273, 1527, 1573, 2655
SspI	AATATT	1 cut(s)	393
SspMI	CTAG	9 cut(s)	512, 651, 704, 735, 945, 1110, 1517, 1824, 1842
StuI	AGGCCT	1 cut(s)	97
StyD4I	CCNGG	5 cut(s)	777, 1080, 1135, 1337, 1936
StyI	CCWWGG	3 cut(s)	703, 930, 2029
TaaI	ACNGT	5 cut(s)	382, 850, 1445, 1636, 2156
TaiI	ACGT	5 cut(s)	353, 888, 1240, 1754, 1771
TaqI	TCGA	2 cut(s)	2320, 2403
TatI	WGTACW	1 cut(s)	1774
TauI	GCSGC	1 cut(s)	2657
TscAI	CASTG	8 cut(s)	346, 853, 1704, 2089, 2256, 2316, 2564, 2577
TseFI	GTSAC	2 cut(s)	1036, 2098
TseI	GCWGC	9 cut(s)	119, 181, 508, 731, 773, 813, 922, 2593, 2596
Tsp45I	GTSAC	2 cut(s)	1036, 2098
TspGWI	ACGGA	1 cut(s)	1488
TspRI	CASTG	8 cut(s)	346, 853, 1704, 2089, 2256, 2316, 2564, 2577
VpaK11BI	GGWCC	3 cut(s)	1139, 2161, 2314
VspI	ATTAAT	2 cut(s)	822, 1482
XagI	CCTNNNNNAGG	1 cut(s)	707
XapI	RAATTY	2 cut(s)	1412, 2255
XbaI	TCTAGA	3 cut(s)	650, 1516, 1823
XceI	RCATGY	1 cut(s)	410
XhoI	CTCGAG	1 cut(s)	2402
XmaJI	CCTAGG	1 cut(s)	703
XmiI	GTMKAC	2 cut(s)	194, 1470
XmnI	GAANNNNTTC	1 cut(s)	2014
XspI	CTAG	9 cut(s)	512, 651, 704, 735, 945, 1110, 1517, 1824, 1842
Zsp2I	ATGCAT	1 cut(s)	149

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.