Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000434.1

Orthogroup ID

OG0003724

Physical Location & Seq

Genomic Coordinates Forward (+)

30801 .. 36533

Gene Structure 5733 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000434.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2784 bp

atgaagtgggagaagatgcagggagcaagtgctcgcgaagagaagattctagttttggtcaggttgaggcccttaaatgagaaggagcttgcatcgaatgaagtatcagattgggaatgcatcaatgacaccaccatcttataccgaaacacgctgcgggaagggtctacatttccaaatgcctatacatttgacaaagtatttcgaggtggttgccctacaagacaggtttatgaagaaggggcccaacaaattgctctttcagttgtcaatggtatcaactctagtatttttgcatatggtcaaacaagcagtgggaaaacgtacaccatgaatggtatcacagagtttacagtagcagaaatatttgactatatacataggcatgaggaaagagcttttgttgttaagttttcagcgattgagatatacaatgaagctgttcgagaccttctaagcacagataatactccacttaggctactagatgatcctgagcgtgggactattatagagaaaatcactgaggaaactttgagggattggagccatttgaaggagcttctttctatttgtgaagctcaaagacagataggggagaccttattgaacgaaaaaagctccagatcacatcaaattattagattggcaatcgaaagttctgctcgtgagttcttaggcaaaggaaactcaaccacccttgcagctagtgtgaattttgtagacttggcaggcagtgagcgtgcatctcagtcattatcagctgggacaagattaaaagaaggctgccacatcaatcgcagtttgctaactcttagcactgttatacgcaagctaagtaaaggaagacatggacacatcaactacagagattctaagctgacacgcatactgcagccttgcttgggtggtaatgctagaactgccattatttgcactttgagccctgcacgaagccatgttgagcaaactagaaacacccttttgtttgcttgttgtgcaaaagaagtgactacaaaagcgcaggtcaatgtagtcatgtcagacaaggccttagttaagcaattgcaaaaagagctagctagattggaaagcgagctgaggacacccggccctccttcctcagcttctgattatgtagcattactcaaaaagaaagatcttcagattgaaaagatggataaggaaatcagagagctgacaaagcaacgagatcttgctcaatcacgggtggaggacttattgaggatggttggaaatgataatgactcaagacaaactacagatagtcatcatcctaaatggcaagccgggaatatgtcggatgatgaatattcagtatccgagtcatcaggcattactgatcctcgttattcaaatggcgtcagaaagttcaataatccacattttgaagacagagacggtgagagcagtcctgaggagtcgtacacccagcttccagggaactctaaagaccagagtctagaggatactgccaaaggaactgcacaagacactgatgactattgcaaagaggtttgctgtattgagatggaagagtcaagcagggacaggactgttggaaatgaaggagcattctccttgacattaaatggagatacaagtgtagctggtcaagaaatgataacccccatgaatgcagctagagacagcagtaggatgcaaaatggttttgcatatggcgcgttagagcagagactacaagaattacgaacaacaaatgattctctgcgtagttcttaccctgttgaatcacttccaaatgccatttcagcagatatgttgagttctagaagccttaagttaaccaggagttggagttgtagagaaagcctcatgactggctcatcttctcctgatataggagagagaaccccgactaatgggtttgagaaaagttttcctgggagacctgaaggttttgggaggaagtttgctctctcaagttatgattccagtctaaggttgtcaagaaatgattctcagtcttccattgggagtgctgtggatgagcttggggcacagagtactgcagacggggatattactagcgtccatactttcgtcacaggactaaagaaaatggccagaaagcttgagtttgacaagcaaattgtcaacagtgaggaccatgaaacaggagcagctggaaagattgaaaagagtgtgaaagacgtaggaattgatccaatgcttgaagtatcagaaattcctgattggcctctagaatttgagagacagcaaaaggccatatttgaactttgggaaacttgctacatatcagtggtccacagaacctactttttcttgctattcaaaggtgatcctacggattccatttacatggaggtagagctcaggagactttctttcctaaaggaaacttattcccgtggagatcaggctgtggaagatggtcagactttgactttggcttcaagcaagagagctattgctcgtgagagacagatgttaagcaagctgatgcagagaaggttttcagaacgcgagaggaagcgtctctttgagaagtggggtattgcactggactcaaagcgcagaaggctgcagctagccaaccgcctatggagtaacacacaggatatgaaccacgtaatggagagtgcttccatcgttgcaaagctggtcaggttcgtagagcaagggcaggccctcaagggaatgtttgggcttagttttgcgtccccaaaggcaaagcgtagatcctttggatggaaaaatagcacagcatctcttatataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0005911 GO:0006928 GO:0007017 GO:0007018 GO:0008144 GO:0008150 GO:0009506 GO:0009987 GO:0015630 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0030054 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0032991 GO:0035371 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0055044 GO:0071944 GO:0097159 GO:0097367 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:1901265 GO:1901363 GO:1990752

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3490 Kinesin

Protein Analysis

927

Amino Acids

104.22

Weight (kDa)

6.63

Isoelectric Point (pI)

47.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003724)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21300 AT2G21300 AT2G21300 AT2G21300 AT2G21300 AT4G38950 AT4G38950 AT4G38950 AT4G38950 AT4G38950
fragaria_vesca	FvH4_2g10420 FvH4_4g06160
malus_domestica	MD00G1086100.v1.1 MD10G1063300.v1.1
prunus_persica	Prupe.8G084900_v2.0.a1 Prupe.8G084900_v2.0.a1 Prupe.8G084900_v2.0.a1 Prupe.8G084900_v2.0.a1 Prupe.8G084900_v2.0.a1
pyrus_communis	pycom05g04640 pycom10g04890
rosa_chinensis	RchiOBHm_Chr6g0267891
rosa_laevigata	RLG00000013970
rosa_multiflora	Rmu_sc0000434.1_g000005 Rmu_sc0005400.1_g000005
rosa_roxburghii	Rroxscaffold_7G00200350
rosa_rugosa	Rorug06G0034600 Rorug06G0034600 Rorug06G0034600
rosa_samantha	Rh6AG156800 Rh6BG158000 Rh6CG158200 Rh6DG143200
rosa_wichuraiana	Rw6G013620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1015
AccB7I	CCANNNNNTGG	2 cut(s)	1836, 2638
AccI	GTMKAC	2 cut(s)	167, 723
AccII	CGCG	3 cut(s)	36, 1706, 2529
AciI	CCGC	2 cut(s)	157, 2602
AclWI	GGATC	5 cut(s)	485, 1358, 2201, 2339, 2739
AcoI	YGGCCR	1 cut(s)	2106
AcsI	RAATTY	3 cut(s)	715, 2229, 2249
AcuI	CTGAAG	2 cut(s)	1148, 1956
AcyI	GRCGYC	1 cut(s)	1383
AfaI	GTAC	3 cut(s)	326, 1448, 2050
AfiI	CCNNNNNNNGG	9 cut(s)	500, 556, 905, 1836, 1883, 1904, 1983, 2638, 2754
AflII	CTTAAG	1 cut(s)	1820
AjnI	CCWGG	3 cut(s)	1459, 1829, 1924
AjuI	GAANNNNNNNTTGG	2 cut(s)	1774, 1806
Alw21I	GWGCWC	2 cut(s)	34, 2379
AlwI	GGATC	5 cut(s)	485, 1358, 2201, 2339, 2739
AlwNI	CAGNNNCTG	1 cut(s)	1130
AoxI	GGCC	8 cut(s)	68, 243, 1050, 1111, 2106, 2240, 2268, 2691
ApaI	GGGCCC	1 cut(s)	247
ApeKI	GCWGC	8 cut(s)	154, 704, 786, 895, 1661, 2165, 2587, 2590
ApoI	RAATTY	3 cut(s)	715, 2229, 2249
ArsI	GACNNNNNNTTYG	2 cut(s)	2434, 2466
Asp700I	GAANNNNTTC	4 cut(s)	441, 1776, 1999, 2518
AspLEI	GCGC	3 cut(s)	1024, 1706, 2580
AspS9I	GGNCC	7 cut(s)	69, 243, 244, 1112, 2149, 2308, 2692
AsuC2I	CCSGG	2 cut(s)	1110, 1312
AsuHPI	GGTGA	2 cut(s)	1436, 2354
AsuNHI	GCTAGC	2 cut(s)	1078, 2593
AvaII	GGWCC	2 cut(s)	2149, 2308
AxyI	CCTNAGG	1 cut(s)	1437
BaeGI	GKGCMC	2 cut(s)	247, 2044
BaeI	ACNNNNGTAYC	2 cut(s)	1611, 1644
BalI	TGGCCA	1 cut(s)	2108
BanII	GRGCYC	3 cut(s)	247, 947, 2379
BauI	CACGAG	2 cut(s)	666, 2478
BbsI	GAAGAC	3 cut(s)	853, 1419, 2001
Bbv12I	GWGCWC	2 cut(s)	34, 2379
BbvCI	CCTCAGC	2 cut(s)	1100, 1123
BbvI	GCAGC	8 cut(s)	141, 716, 773, 907, 1673, 2177, 2574, 2602
BccI	CCATC	7 cut(s)	143, 1171, 1243, 1546, 2429, 2660, 2748
BcgI	CGANNNNNNTGC	4 cut(s)	195, 229, 644, 678
BciT130I	CCWGG	3 cut(s)	1461, 1831, 1926
BciVI	GTATCC	2 cut(s)	1351, 1483
BcnI	CCSGG	2 cut(s)	1110, 1312
BfmI	CTRYAG	5 cut(s)	865, 893, 1281, 2052, 2588
BfrI	CTTAAG	1 cut(s)	1820
BfuAI	ACCTGC	1 cut(s)	1015
BfuI	GTATCC	2 cut(s)	1351, 1483
BglII	AGATCT	2 cut(s)	1159, 1213
BisI	GCNGC	8 cut(s)	155, 705, 787, 896, 1662, 2166, 2588, 2591
BlsI	GCNGC	8 cut(s)	156, 706, 788, 897, 1663, 2167, 2589, 2592
BmcAI	AGTACT	1 cut(s)	2050
Bme1390I	CCNGG	5 cut(s)	1110, 1312, 1461, 1831, 1926
Bme18I	GGWCC	2 cut(s)	2149, 2308
BmgT120I	GGNCC	7 cut(s)	69, 243, 244, 1112, 2149, 2308, 2692
BmiI	GGNNCC	3 cut(s)	244, 245, 548
BmrFI	CCNGG	5 cut(s)	1110, 1312, 1461, 1831, 1926
BmsI	GCATC	7 cut(s)	6, 101, 129, 755, 1671, 2496, 2780
BmtI	GCTAGC	2 cut(s)	1082, 2597
BoxI	GACNNNNGTC	1 cut(s)	1479
BpiI	GAAGAC	3 cut(s)	853, 1419, 2001
BplI	GAGNNNNNCTC	2 cut(s)	1839, 1871
BpmI	CTGGAG	1 cut(s)	607
Bpu10I	CCTNAGC	4 cut(s)	495, 1100, 1123, 2378
BpuEI	CTTGAG	4 cut(s)	1255, 1948, 2138, 2681
BpuMI	CCSGG	2 cut(s)	1110, 1312
BsaAI	YACGTR	1 cut(s)	2635
BsaBI	GATNNNNATC	1 cut(s)	1290
BsaHI	GRCGYC	1 cut(s)	1383
BsaI	GGTCTC	3 cut(s)	441, 593, 1924
BsaJI	CCNNGG	3 cut(s)	1460, 1925, 2413
BsaXI	ACNNNNNCTCC	2 cut(s)	1825, 1855
Bsc4I	CCNNNNNNNGG	9 cut(s)	500, 556, 905, 1836, 1883, 1904, 1983, 2638, 2754
Bse1I	ACTGG	3 cut(s)	1867, 1977, 2571
Bse21I	CCTNAGG	1 cut(s)	1437
Bse8I	GATNNNNATC	1 cut(s)	1290
BseBI	CCWGG	3 cut(s)	1461, 1831, 1926
BseDI	CCNNGG	3 cut(s)	1460, 1925, 2413
BseGI	GGATG	6 cut(s)	1254, 1294, 1330, 1686, 2035, 2759
BseJI	GATNNNNATC	1 cut(s)	1290
BseLI	CCNNNNNNNGG	9 cut(s)	500, 556, 905, 1836, 1883, 1904, 1983, 2638, 2754
BseMII	CTCAG	8 cut(s)	486, 516, 764, 1091, 1137, 1428, 2018, 2392
BseNI	ACTGG	3 cut(s)	1867, 1977, 2571
BseRI	GAGGAG	1 cut(s)	1454
BseSI	GKGCMC	2 cut(s)	247, 2044
BseXI	GCAGC	8 cut(s)	141, 716, 773, 907, 1673, 2177, 2574, 2602
BseYI	CCCAGC	2 cut(s)	764, 1452
BsgI	GTGCAG	2 cut(s)	933, 1491
Bsh1236I	CGCG	3 cut(s)	36, 1706, 2529
BshFI	GGCC	8 cut(s)	70, 245, 1052, 1113, 2108, 2242, 2270, 2693
BsiHKAI	GWGCWC	2 cut(s)	34, 2379
BsiSI	CCGG	2 cut(s)	1110, 1311
BslFI	GGGAC	4 cut(s)	517, 781, 1583, 2710
BslI	CCNNNNNNNGG	9 cut(s)	500, 556, 905, 1836, 1883, 1904, 1983, 2638, 2754
BsmBI	CGTCTC	2 cut(s)	1413, 2546
BsmFI	GGGAC	4 cut(s)	517, 781, 1583, 2710
BsmI	GAATGC	3 cut(s)	122, 1595, 1663
BsnI	GGCC	8 cut(s)	70, 245, 1052, 1113, 2108, 2242, 2270, 2693
Bso31I	GGTCTC	3 cut(s)	441, 593, 1924
Bsp120I	GGGCCC	1 cut(s)	243
Bsp1286I	GDGCHC	5 cut(s)	34, 247, 947, 2044, 2379
Bsp143I	GATC	9 cut(s)	490, 626, 1159, 1213, 1363, 2206, 2344, 2419, 2744
Bsp68I	TCGCGA	1 cut(s)	36
BspACI	CCGC	2 cut(s)	157, 2602
BspANI	GGCC	8 cut(s)	70, 245, 1052, 1113, 2108, 2242, 2270, 2693
BspCNI	CTCAG	8 cut(s)	487, 517, 763, 1092, 1136, 1429, 2017, 2391
BspFNI	CGCG	3 cut(s)	36, 1706, 2529
BspHI	TCATGA	1 cut(s)	1857
BspLI	GGNNCC	3 cut(s)	244, 245, 548
BspMAI	CTGCAG	3 cut(s)	897, 2056, 2592
BspMI	ACCTGC	1 cut(s)	1015
BspOI	GCTAGC	2 cut(s)	1082, 2597
BspPI	GGATC	5 cut(s)	485, 1358, 2201, 2339, 2739
BspTI	CTTAAG	1 cut(s)	1820
BspTNI	GGTCTC	3 cut(s)	441, 593, 1924
BsrI	ACTGG	3 cut(s)	1867, 1977, 2571
BssECI	CCNNGG	3 cut(s)	1460, 1925, 2413
BssMI	GATC	9 cut(s)	490, 626, 1159, 1213, 1363, 2206, 2344, 2419, 2744
BssNI	GRCGYC	1 cut(s)	1383
BssSI	CACGAG	2 cut(s)	666, 2478
Bst2BI	CACGAG	2 cut(s)	666, 2478
Bst2UI	CCWGG	3 cut(s)	1461, 1831, 1926
Bst4CI	ACNGT	5 cut(s)	355, 823, 1424, 1579, 2144
Bst6I	CTCTTC	2 cut(s)	33, 1551
BstACI	GRCGYC	1 cut(s)	1383
BstAFI	CTTAAG	1 cut(s)	1820
BstBAI	YACGTR	1 cut(s)	2635
BstDSI	CCRYGG	1 cut(s)	2413
BstENI	CCTNNNNNAGG	1 cut(s)	1881
BstF5I	GGATG	6 cut(s)	1254, 1294, 1330, 1686, 2035, 2759
BstFNI	CGCG	3 cut(s)	36, 1706, 2529
BstHHI	GCGC	3 cut(s)	1024, 1706, 2580
BstKTI	GATC	9 cut(s)	493, 629, 1162, 1216, 1366, 2209, 2347, 2422, 2747
BstMBI	GATC	9 cut(s)	490, 626, 1159, 1213, 1363, 2206, 2344, 2419, 2744
BstMWI	GCNNNNNNNGC	8 cut(s)	923, 942, 998, 1075, 1204, 1703, 1793, 2584
BstNI	CCWGG	3 cut(s)	1461, 1831, 1926
BstPAI	GACNNNNGTC	1 cut(s)	1479
BstSCI	CCNGG	5 cut(s)	1108, 1310, 1459, 1829, 1924
BstSFI	CTRYAG	5 cut(s)	865, 893, 1281, 2052, 2588
BstSLI	GKGCMC	2 cut(s)	247, 2044
BstUI	CGCG	3 cut(s)	36, 1706, 2529
BstV1I	GCAGC	8 cut(s)	141, 716, 773, 907, 1673, 2177, 2574, 2602
BstV2I	GAAGAC	3 cut(s)	853, 1419, 2001
BstX2I	RGATCY	3 cut(s)	1159, 1213, 2744
BstXI	CCANNNNNNTGG	1 cut(s)	2365
BstYI	RGATCY	3 cut(s)	1159, 1213, 2744
Bsu36I	CCTNAGG	1 cut(s)	1437
BsuI	GTATCC	2 cut(s)	1351, 1483
BsuRI	GGCC	8 cut(s)	70, 245, 1052, 1113, 2108, 2242, 2270, 2693
BtgI	CCRYGG	1 cut(s)	2413
BtsCI	GGATG	6 cut(s)	1254, 1294, 1330, 1686, 2035, 2759
BtsI	GCAGTG	2 cut(s)	319, 742
BtsIMutI	CAGTG	8 cut(s)	319, 522, 742, 819, 1515, 2149, 2310, 2564
BtuMI	TCGCGA	1 cut(s)	36
BveI	ACCTGC	1 cut(s)	1015
CaiI	CAGNNNCTG	1 cut(s)	1130
CciI	TCATGA	1 cut(s)	1857
CfoI	GCGC	3 cut(s)	1024, 1706, 2580
Cfr13I	GGNCC	7 cut(s)	69, 243, 244, 1112, 2149, 2308, 2692
CseI	GACGC	4 cut(s)	1372, 2062, 2528, 2712
Csp6I	GTAC	3 cut(s)	325, 1447, 2049
CviAII	CATG	9 cut(s)	331, 386, 851, 959, 1039, 1654, 1858, 2153, 2365
CviQI	GTAC	3 cut(s)	325, 1447, 2049
DpnI	GATC	9 cut(s)	492, 628, 1161, 1215, 1365, 2208, 2346, 2421, 2746
DpnII	GATC	9 cut(s)	490, 626, 1159, 1213, 1363, 2206, 2344, 2419, 2744
EaeI	YGGCCR	1 cut(s)	2106
Eam1104I	CTCTTC	2 cut(s)	33, 1551
EarI	CTCTTC	2 cut(s)	33, 1551
Ecl136II	GAGCTC	1 cut(s)	2377
Eco147I	AGGCCT	1 cut(s)	1052
Eco24I	GRGCYC	3 cut(s)	247, 947, 2379
Eco31I	GGTCTC	3 cut(s)	441, 593, 1924
Eco47I	GGWCC	2 cut(s)	2149, 2308
Eco53kI	GAGCTC	1 cut(s)	2377
Eco57I	CTGAAG	2 cut(s)	1148, 1956
Eco81I	CCTNAGG	1 cut(s)	1437
EcoICRI	GAGCTC	1 cut(s)	2377
EcoNI	CCTNNNNNAGG	1 cut(s)	1881
EcoO109I	RGGNCCY	3 cut(s)	69, 243, 2692
EcoRII	CCWGG	3 cut(s)	1459, 1829, 1924
EcoT22I	ATGCAT	1 cut(s)	122
EcoT38I	GRGCYC	3 cut(s)	247, 947, 2379
Esp3I	CGTCTC	2 cut(s)	1413, 2546
FaeI	CATG	9 cut(s)	334, 389, 854, 962, 1042, 1657, 1861, 2156, 2368
FalI	AAGNNNNNCTT	2 cut(s)	2528, 2560
FaqI	GGGAC	4 cut(s)	517, 781, 1583, 2710
FatI	CATG	9 cut(s)	330, 385, 850, 958, 1038, 1653, 1857, 2152, 2364
FauI	CCCGC	1 cut(s)	150
FauNDI	CATATG	2 cut(s)	298, 1699
FblI	GTMKAC	2 cut(s)	167, 723
Fnu4HI	GCNGC	8 cut(s)	155, 705, 787, 896, 1662, 2166, 2588, 2591
FokI	GGATG	6 cut(s)	1261, 1281, 1337, 1693, 2042, 2766
FriOI	GRGCYC	3 cut(s)	247, 947, 2379
Fsp4HI	GCNGC	8 cut(s)	155, 705, 787, 896, 1662, 2166, 2588, 2591
GlaI	GCGC	3 cut(s)	1023, 1705, 2579
GluI	GCNGC	8 cut(s)	155, 705, 787, 896, 1662, 2166, 2588, 2591
GsaI	CCCAGC	2 cut(s)	768, 1456
GsuI	CTGGAG	1 cut(s)	607
HaeIII	GGCC	8 cut(s)	70, 245, 1052, 1113, 2108, 2242, 2270, 2693
HapII	CCGG	2 cut(s)	1110, 1311
HgaI	GACGC	4 cut(s)	1372, 2062, 2528, 2712
HhaI	GCGC	3 cut(s)	1024, 1706, 2580
Hin1I	GRCGYC	1 cut(s)	1383
Hin1II	CATG	9 cut(s)	334, 389, 854, 962, 1042, 1657, 1861, 2156, 2368
Hin6I	GCGC	3 cut(s)	1022, 1704, 2578
HinP1I	GCGC	3 cut(s)	1022, 1704, 2578
HincII	GTYRAC	2 cut(s)	1827, 2140
HindII	GTYRAC	2 cut(s)	1827, 2140
HindIII	AAGCTT	1 cut(s)	2114
HpaI	GTTAAC	1 cut(s)	1827
HpaII	CCGG	2 cut(s)	1110, 1311
HphI	GGTGA	2 cut(s)	1436, 2354
Hpy166II	GTNNAC	8 cut(s)	168, 327, 351, 724, 1449, 1827, 2140, 2311
Hpy8I	GTNNAC	8 cut(s)	168, 327, 351, 724, 1449, 1827, 2140, 2311
HpyCH4III	ACNGT	5 cut(s)	355, 823, 1424, 1579, 2144
HpyCH4IV	ACGT	3 cut(s)	323, 2196, 2634
HpyF10VI	GCNNNNNNNGC	8 cut(s)	923, 942, 998, 1075, 1204, 1703, 1793, 2584
HpySE526I	ACGT	3 cut(s)	323, 2196, 2634
Hsp92I	GRCGYC	1 cut(s)	1383
Hsp92II	CATG	9 cut(s)	334, 389, 854, 962, 1042, 1657, 1861, 2156, 2368
HspAI	GCGC	3 cut(s)	1022, 1704, 2578
KspAI	GTTAAC	1 cut(s)	1827
Kzo9I	GATC	9 cut(s)	490, 626, 1159, 1213, 1363, 2206, 2344, 2419, 2744
LmnI	GCTCC	7 cut(s)	23, 85, 546, 559, 626, 1592, 2162
Lsp1109I	GCAGC	8 cut(s)	141, 716, 773, 907, 1673, 2177, 2574, 2602
LweI	GCATC	7 cut(s)	6, 101, 129, 755, 1671, 2496, 2780
MaeII	ACGT	3 cut(s)	323, 2196, 2634
MaeIII	GTNAC	3 cut(s)	1009, 2086, 2612
MalI	GATC	9 cut(s)	492, 628, 1161, 1215, 1365, 2208, 2346, 2421, 2746
MboI	GATC	9 cut(s)	490, 626, 1159, 1213, 1363, 2206, 2344, 2419, 2744
MfeI	CAATTG	1 cut(s)	1064
MflI	RGATCY	3 cut(s)	1159, 1213, 2744
MhlI	GDGCHC	5 cut(s)	34, 247, 947, 2044, 2379
MlsI	TGGCCA	1 cut(s)	2108
MluCI	AATT	9 cut(s)	252, 636, 715, 1064, 1727, 2133, 2202, 2229, 2249
MluNI	TGGCCA	1 cut(s)	2108
MlyI	GAGTC	6 cut(s)	1262, 1355, 1451, 1489, 1568, 2564
MmeI	TCCRAC	4 cut(s)	1234, 1302, 1561, 1817
Mox20I	TGGCCA	1 cut(s)	2108
Mph1103I	ATGCAT	1 cut(s)	122
MroXI	GAANNNNTTC	4 cut(s)	441, 1776, 1999, 2518
MscI	TGGCCA	1 cut(s)	2108
MseI	TTAA	8 cut(s)	74, 408, 776, 1059, 1610, 1821, 1826, 2495
MslI	CAYNNNNRTG	3 cut(s)	384, 2303, 2363
Msp20I	TGGCCA	1 cut(s)	2108
MspA1I	CMGCKG	2 cut(s)	764, 2168
MspCI	CTTAAG	1 cut(s)	1820
MspI	CCGG	2 cut(s)	1110, 1311
MspR9I	CCNGG	5 cut(s)	1110, 1312, 1461, 1831, 1926
MunI	CAATTG	1 cut(s)	1064
Mva1269I	GAATGC	3 cut(s)	122, 1595, 1663
MvaI	CCWGG	3 cut(s)	1461, 1831, 1926
MvnI	CGCG	3 cut(s)	36, 1706, 2529
MwoI	GCNNNNNNNGC	8 cut(s)	923, 942, 998, 1075, 1204, 1703, 1793, 2584
NciI	CCSGG	2 cut(s)	1110, 1312
NdeI	CATATG	2 cut(s)	298, 1699
NdeII	GATC	9 cut(s)	490, 626, 1159, 1213, 1363, 2206, 2344, 2419, 2744
NheI	GCTAGC	2 cut(s)	1078, 2593
NlaIII	CATG	9 cut(s)	334, 389, 854, 962, 1042, 1657, 1861, 2156, 2368
NlaIV	GGNNCC	3 cut(s)	244, 245, 548
NmuCI	GTSAC	2 cut(s)	1009, 2086
NruI	TCGCGA	1 cut(s)	36
NsiI	ATGCAT	1 cut(s)	122
PagI	TCATGA	1 cut(s)	1857
PceI	AGGCCT	1 cut(s)	1052
PctI	GAATGC	3 cut(s)	122, 1595, 1663
PdmI	GAANNNNTTC	4 cut(s)	441, 1776, 1999, 2518
PfeI	GAWTC	7 cut(s)	46, 872, 1745, 1772, 1973, 2000, 2354
PflMI	CCANNNNNTGG	2 cut(s)	1836, 2638
PkrI	GCNGC	8 cut(s)	156, 706, 788, 897, 1663, 2167, 2589, 2592
PleI	GAGTC	6 cut(s)	1262, 1354, 1450, 1488, 1567, 2564
PpsI	GAGTC	6 cut(s)	1262, 1354, 1450, 1488, 1567, 2564
Ppu21I	YACGTR	1 cut(s)	2635
PshAI	GACNNNNGTC	1 cut(s)	1479
Psp124BI	GAGCTC	1 cut(s)	2379
Psp6I	CCWGG	3 cut(s)	1459, 1829, 1924
PspFI	CCCAGC	2 cut(s)	764, 1452
PspGI	CCWGG	3 cut(s)	1459, 1829, 1924
PspN4I	GGNNCC	3 cut(s)	244, 245, 548
PspOMI	GGGCCC	1 cut(s)	243
PspPI	GGNCC	7 cut(s)	69, 243, 244, 1112, 2149, 2308, 2692
PstI	CTGCAG	3 cut(s)	897, 2056, 2592
PstNI	CAGNNNCTG	1 cut(s)	1130
PsuI	RGATCY	3 cut(s)	1159, 1213, 2744
PvuII	CAGCTG	2 cut(s)	764, 2168
RruI	TCGCGA	1 cut(s)	36
RsaI	GTAC	3 cut(s)	326, 1448, 2050
RsaNI	GTAC	3 cut(s)	325, 1447, 2049
RseI	CAYNNNNRTG	3 cut(s)	384, 2303, 2363
SacI	GAGCTC	1 cut(s)	2379
SaqAI	TTAA	8 cut(s)	74, 408, 776, 1059, 1610, 1821, 1826, 2495
SatI	GCNGC	8 cut(s)	155, 705, 787, 896, 1662, 2166, 2588, 2591
Sau3AI	GATC	9 cut(s)	490, 626, 1159, 1213, 1363, 2206, 2344, 2419, 2744
Sau96I	GGNCC	7 cut(s)	69, 243, 244, 1112, 2149, 2308, 2692
ScaI	AGTACT	1 cut(s)	2050
SchI	GAGTC	6 cut(s)	1262, 1355, 1451, 1489, 1568, 2564
ScrFI	CCNGG	5 cut(s)	1110, 1312, 1461, 1831, 1926
SduI	GDGCHC	5 cut(s)	34, 247, 947, 2044, 2379
SfaNI	GCATC	7 cut(s)	6, 101, 129, 755, 1671, 2496, 2780
SfcI	CTRYAG	5 cut(s)	865, 893, 1281, 2052, 2588
SinI	GGWCC	2 cut(s)	2149, 2308
SmiMI	CAYNNNNRTG	3 cut(s)	384, 2303, 2363
SmlI	CTYRAG	5 cut(s)	1270, 1820, 1963, 2117, 2696
SmoI	CTYRAG	5 cut(s)	1270, 1820, 1963, 2117, 2696
Sse9I	AATT	9 cut(s)	252, 636, 715, 1064, 1727, 2133, 2202, 2229, 2249
SseBI	AGGCCT	1 cut(s)	1052
SsiI	CCGC	2 cut(s)	157, 2602
SspI	AATATT	2 cut(s)	366, 1334
SstI	GAGCTC	1 cut(s)	2379
StuI	AGGCCT	1 cut(s)	1052
StyD4I	CCNGG	5 cut(s)	1108, 1310, 1459, 1829, 1924
TaaI	ACNGT	5 cut(s)	355, 823, 1424, 1579, 2144
TaiI	ACGT	3 cut(s)	326, 2199, 2637
TaqI	TCGA	4 cut(s)	95, 205, 445, 654
TasI	AATT	9 cut(s)	252, 636, 715, 1064, 1727, 2133, 2202, 2229, 2249
TatI	WGTACW	1 cut(s)	2048
TfiI	GAWTC	7 cut(s)	46, 872, 1745, 1772, 1973, 2000, 2354
Tru1I	TTAA	8 cut(s)	74, 408, 776, 1059, 1610, 1821, 1826, 2495
Tru9I	TTAA	8 cut(s)	74, 408, 776, 1059, 1610, 1821, 1826, 2495
TscAI	CASTG	8 cut(s)	319, 529, 742, 826, 1522, 2149, 2310, 2571
TseFI	GTSAC	2 cut(s)	1009, 2086
TseI	GCWGC	8 cut(s)	154, 704, 786, 895, 1661, 2165, 2587, 2590
Tsp45I	GTSAC	2 cut(s)	1009, 2086
TspGWI	ACGGA	1 cut(s)	2366
TspRI	CASTG	8 cut(s)	319, 529, 742, 826, 1522, 2149, 2310, 2571
Van91I	CCANNNNNTGG	2 cut(s)	1836, 2638
Vha464I	CTTAAG	1 cut(s)	1820
VpaK11BI	GGWCC	2 cut(s)	2149, 2308
XagI	CCTNNNNNAGG	1 cut(s)	1881
XapI	RAATTY	3 cut(s)	715, 2229, 2249
XbaI	TCTAGA	3 cut(s)	1483, 1811, 2245
XmiI	GTMKAC	2 cut(s)	167, 723
XmnI	GAANNNNTTC	4 cut(s)	441, 1776, 1999, 2518
ZrmI	AGTACT	1 cut(s)	2050
Zsp2I	ATGCAT	1 cut(s)	122

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.