Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0003724

Physical Location & Seq

Genomic Coordinates Forward (+)

25217232 .. 25223031

Gene Structure 5800 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G013620.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2811 bp

ATGGGGGCAATTGGTAGGGAAGACCTGGTGAAGTGGGAGAAGATGCAGGGAGCTAGTGCTCGCGAAGAGAAGATTTTAGTTTTGGTCAGGTTGAGGCCCTTAAATGAGAAGGAGCTTGCATCGAATGAAGTATCAGATTGGGAATGCATCAATGACACCACCATCTTATACCGAAACACGCTGCGGGAAGGGTCTACATTTCCAAATGCCTATACATTTGACAAAGTATTTCGAGGTGATTGCCCTACAAGACAGGTTTATGAAGAAGGGGCCCAACAAATTGCTCTTTCAGTTGTCAATGGTATCAACTCTAGTATTTTTGCATATGGTCAAACAAGCAGTGGGAAAACGTACACCATGAATGGTATCACAGAGTTTACAGTAGCGGAAATATTTGACTATATACATAGGCATGAGGAAAGAGCTTTTGTTGTTAAGTTTTCAGCGATTGAGATATACAATGAAGCTGTTCGAGACCTTCTAAGCACAGATAATACTCCACTTAGGCTACTAGATGATCCTGAGCGTGGGACTATTATAGAGAAAATCACTGAGGAAACTTTGAGGGATTGGAGCCATTTGAAGGAGCTTCTTTCTATTTGTGAAGCTCAAAGACAGATAGGGGAGACCTTATTGAACGAAAAAAGCTCCAGATCACATCAAATTATTAGATTGGCAATCGAAAGTTCTGCTCGTGAGTTCTTAGGCAAAGGAAACTCAACCACCCTTGCAGCTAGTGTGAATTTTGTAGACTTGGCAGGCAGTGAGCGTGCATCTCAGTCATTATCAGCTGGGACAAGATTAAAAGAAGGCTGCCACATCAATCGCAGTTTGCTGACTCTTAGCACTGTTATACGCAAGCTAAGTAAAGGAAGACATGGACACATCAACTACAGAGATTCTAAGCTGACACGCATACTGCAGCCTTGCTTGGGTGGTAATGCTAGAACTGCCATTATTTGCACTTTGAGCCCTGCACGAAGCCATGTTGAGCAAACTAGAAACACCCTTTTGTTTGCTTGTTGCGCAAAAGAAGTGACTACAAAAGCGCAGGTCAATGTAGTCATGTCAGACAAGGCCTTAGTTAAGCAATTGCAAAAAGAGCTAGCTAGATTAGAAAGCGAGCTGAGGACACCCGGCCCTCCTTCCTCAGCTTCTGATTATGTAGCATTACTCAAAAAGAAAGATCTTCAGATTGAAAAGATGGATAAGGAAATCAGAGAGCTGACAAAGCAACGAGATCTTGCTCAATCACGGGTGGAGGACTTATTGAGGATGGTTGGAAATGATAACGACTCAAGACAAACTACAGATAGTCATCATCCTAAATGGCAAGCCGGGGGTATGTCGGATGATGAATATTCAGTATCCGAGTCATCAGGCATTGCCGATCCTCGTTATTCAAATGGCGTCAGAAAGTTCAATAATCCACATTTTGAAGACAGAGACGGTGAGAGCAGTCCTGAGGAGTCGTACACCCAGCTTCCAGGGAACTCTAAAGACCAGAGTCTAGAGGATACTGCCAAAGGAACTGCACAAGACACTGATGACTATTGCAAAGAGGTTTGCTGTATTGAGATGGAAGAGTCAAGCAGGGACAGGACTGTTGGAAATGAAGGAGCATTCTCCTTGACATTAAATGGGGATACAAGTGTAGCTGGTCAAGAAATGATAACCCCCATGAATGCAGCTAGAGACAGCAGTAGGATGCAAAATGGTTTTGCATATGGCGCGTTAGAGCAGAGACTACAAGAATTACGAACAACAAATGATTCTCTGCGCAGTTCTTACCCTGTTGAATCACTTCCAAATGCCATTTCAGCAGATATGTTGAGTTCTAGAAGCCTTAAGTTAACCAGGAGTTGGAGTTGTAGAGAAAGCCTCATGACTGGCTCATCTTCTCCTGATATAGGAGAGAGAACCCCGACTAATGGGTTTGAGAAAAGTTTTCCTGGGAGACCTGAAGGTTTTGGGAGGAAGTTTGCTCTCTCAAGTTATGATTCCAGTCTAAGATTGTCAAGAAATGATTCTCAGTCTTCCATTGGGAGTGCTGTGGATGAGCTTGGGGCACAGAGTACTGCAGACGGGGATATTACTAGCGTCCATACTTTCGTCACAGGACTAAAGAAAATGGCCAGAAAGCTTGAGTTTGACAAGCAAATTGTCAACAATGAGGACCATGAAACAGGAGCAGCTGGAAAGTTTGAAAAGAGTGTGAAAGACGTAGGAATTGATCCAATGCTTGAAGTATCAGAAATTCCTGATTGGCCTCTAGAATTTGAGAGACAGCAAAAGGCCATATTTGAACTTTGGGAAACTTGCTACATATCAGTGGTCCACAGAACCTACTTTTTCTTGCTATTCAAAGGTGATCCTACGGATTCCATTTACATGGAGGTAGAGCTCAGGAGACTTTCTTTCCTACAGGAAACTTATTCCCGTGGAGATCAGGCTGTGGAAGATGGTCAGACTTTGACTTTGGCTTCAAGCAAGAGAGCTATTGCTCGTGAGAGACAGATGTTAAGCAAGCTGATGCAGAGAAGGTTTTCAGAACGCGAGAGGAAGCGTCTCTTTGAGAAGTGGGGTATTGCACTGGACTCAAAGCGCAGAAGGCTGCAGCTAGCCAACCGCCTATGGAGTAACACACAGGATATGAACCACGTAATGGAGAGTGCTTCCATCGTTGCAAAGCTGGTCAGGTTCGTAGAGCAAGGGCAGGCCCTCAAGGGAATGTTTGGGCTTAGTTTTGCGTCCCCAAAGGCAAAGCGTAGATCCTTTGGATGGAAAAATAGCACAGCATCTCTTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0005911 GO:0006928 GO:0007017 GO:0007018 GO:0008144 GO:0008150 GO:0009506 GO:0009987 GO:0015630 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0030054 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0032991 GO:0035371 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0055044 GO:0071944 GO:0097159 GO:0097367 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:1901265 GO:1901363 GO:1990752

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3490 Kinesin

Protein Analysis

936

Amino Acids

105.16

Weight (kDa)

6.3

Isoelectric Point (pI)

47.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Microtub_bd	PF16796	25 - 161	2.3e-21	Microtubule binding
Kinesin	PF00225	30 - 346	8.9e-97	Kinesin motor domain
DUF3490	PF11995	759 - 918	1.2e-76	Domain of unknown function (DUF3490)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003724)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G21300 AT2G21300 AT2G21300 AT2G21300 AT2G21300 AT4G38950 AT4G38950 AT4G38950 AT4G38950 AT4G38950
fragaria_vesca	FvH4_2g10420 FvH4_4g06160
malus_domestica	MD00G1086100.v1.1 MD10G1063300.v1.1
prunus_persica	Prupe.8G084900_v2.0.a1 Prupe.8G084900_v2.0.a1 Prupe.8G084900_v2.0.a1 Prupe.8G084900_v2.0.a1 Prupe.8G084900_v2.0.a1
pyrus_communis	pycom05g04640 pycom10g04890
rosa_chinensis	RchiOBHm_Chr6g0267891
rosa_laevigata	RLG00000013970
rosa_multiflora	Rmu_sc0000434.1_g000005 Rmu_sc0005400.1_g000005
rosa_roxburghii	Rroxscaffold_7G00200350
rosa_rugosa	Rorug06G0034600 Rorug06G0034600 Rorug06G0034600
rosa_samantha	Rh6AG156800 Rh6BG158000 Rh6CG158200 Rh6DG143200
rosa_wichuraiana	Rw6G013620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	1027, 1781
Acc36I	ACCTGC	1 cut(s)	1042
AccB7I	CCANNNNNTGG	2 cut(s)	1863, 2665
AccI	GTMKAC	2 cut(s)	194, 750
AccII	CGCG	3 cut(s)	63, 1733, 2556
AciI	CCGC	3 cut(s)	184, 386, 2629
AclWI	GGATC	5 cut(s)	512, 1385, 2228, 2366, 2766
AcoI	YGGCCR	1 cut(s)	2133
AcsI	RAATTY	3 cut(s)	742, 2256, 2276
AcuI	CTGAAG	2 cut(s)	1175, 1983
AcyI	GRCGYC	1 cut(s)	1410
AfaI	GTAC	3 cut(s)	353, 1475, 2077
AfiI	CCNNNNNNNGG	8 cut(s)	527, 583, 932, 1863, 1910, 1931, 2665, 2781
AflII	CTTAAG	1 cut(s)	1847
AjnI	CCWGG	4 cut(s)	24, 1486, 1856, 1951
AjuI	GAANNNNNNNTTGG	2 cut(s)	1801, 1833
Alw21I	GWGCWC	2 cut(s)	61, 2406
AlwI	GGATC	5 cut(s)	512, 1385, 2228, 2366, 2766
AlwNI	CAGNNNCTG	1 cut(s)	1157
AoxI	GGCC	8 cut(s)	95, 270, 1077, 1138, 2133, 2267, 2295, 2718
ApaI	GGGCCC	1 cut(s)	274
ApeKI	GCWGC	8 cut(s)	181, 731, 813, 922, 1688, 2192, 2614, 2617
ApoI	RAATTY	3 cut(s)	742, 2256, 2276
ArsI	GACNNNNNNTTYG	2 cut(s)	2461, 2493
Asp700I	GAANNNNTTC	4 cut(s)	468, 1803, 2026, 2545
AspLEI	GCGC	5 cut(s)	1028, 1051, 1733, 1782, 2607
AspS9I	GGNCC	7 cut(s)	96, 270, 271, 1139, 2176, 2335, 2719
AsuC2I	CCSGG	2 cut(s)	1137, 1339
AsuHPI	GGTGA	4 cut(s)	40, 248, 1463, 2381
AsuNHI	GCTAGC	2 cut(s)	1105, 2620
AvaII	GGWCC	2 cut(s)	2176, 2335
AxyI	CCTNAGG	1 cut(s)	1464
BaeGI	GKGCMC	2 cut(s)	274, 2071
BaeI	ACNNNNGTAYC	2 cut(s)	1638, 1671
BalI	TGGCCA	1 cut(s)	2135
BanII	GRGCYC	3 cut(s)	274, 974, 2406
BauI	CACGAG	2 cut(s)	693, 2505
BbsI	GAAGAC	4 cut(s)	27, 880, 1446, 2028
Bbv12I	GWGCWC	2 cut(s)	61, 2406
BbvCI	CCTCAGC	2 cut(s)	1127, 1150
BbvI	GCAGC	8 cut(s)	168, 743, 800, 934, 1700, 2204, 2601, 2629
BccI	CCATC	7 cut(s)	170, 1198, 1270, 1573, 2456, 2687, 2775
BcgI	CGANNNNNNTGC	4 cut(s)	222, 256, 671, 705
BciT130I	CCWGG	4 cut(s)	26, 1488, 1858, 1953
BciVI	GTATCC	3 cut(s)	1378, 1510, 1639
BcnI	CCSGG	2 cut(s)	1137, 1339
BfmI	CTRYAG	6 cut(s)	892, 920, 1308, 2079, 2423, 2615
BfrI	CTTAAG	1 cut(s)	1847
BfuAI	ACCTGC	1 cut(s)	1042
BfuI	GTATCC	3 cut(s)	1378, 1510, 1639
BglII	AGATCT	2 cut(s)	1186, 1240
BisI	GCNGC	8 cut(s)	182, 732, 814, 923, 1689, 2193, 2615, 2618
BlsI	GCNGC	8 cut(s)	183, 733, 815, 924, 1690, 2194, 2616, 2619
BmcAI	AGTACT	1 cut(s)	2077
Bme1390I	CCNGG	6 cut(s)	26, 1137, 1339, 1488, 1858, 1953
Bme18I	GGWCC	2 cut(s)	2176, 2335
BmgT120I	GGNCC	7 cut(s)	96, 270, 271, 1139, 2176, 2335, 2719
BmiI	GGNNCC	3 cut(s)	271, 272, 575
BmrFI	CCNGG	6 cut(s)	26, 1137, 1339, 1488, 1858, 1953
BmsI	GCATC	7 cut(s)	33, 128, 156, 782, 1698, 2523, 2807
BmtI	GCTAGC	2 cut(s)	1109, 2624
BoxI	GACNNNNGTC	1 cut(s)	1506
BpiI	GAAGAC	4 cut(s)	27, 880, 1446, 2028
BplI	GAGNNNNNCTC	2 cut(s)	1866, 1898
BpmI	CTGGAG	1 cut(s)	634
Bpu10I	CCTNAGC	4 cut(s)	522, 1127, 1150, 2405
BpuEI	CTTGAG	4 cut(s)	1282, 1975, 2165, 2708
BpuMI	CCSGG	2 cut(s)	1137, 1339
BsaAI	YACGTR	1 cut(s)	2662
BsaBI	GATNNNNATC	1 cut(s)	1317
BsaHI	GRCGYC	1 cut(s)	1410
BsaI	GGTCTC	3 cut(s)	468, 620, 1951
BsaJI	CCNNGG	4 cut(s)	1338, 1487, 1952, 2440
BsaXI	ACNNNNNCTCC	2 cut(s)	1852, 1882
Bsc4I	CCNNNNNNNGG	8 cut(s)	527, 583, 932, 1863, 1910, 1931, 2665, 2781
Bse1I	ACTGG	3 cut(s)	1894, 2004, 2598
Bse21I	CCTNAGG	1 cut(s)	1464
Bse3DI	GCAATG	1 cut(s)	1383
Bse8I	GATNNNNATC	1 cut(s)	1317
BseBI	CCWGG	4 cut(s)	26, 1488, 1858, 1953
BseDI	CCNNGG	4 cut(s)	1338, 1487, 1952, 2440
BseGI	GGATG	6 cut(s)	1281, 1321, 1357, 1713, 2062, 2786
BseJI	GATNNNNATC	1 cut(s)	1317
BseLI	CCNNNNNNNGG	8 cut(s)	527, 583, 932, 1863, 1910, 1931, 2665, 2781
BseMI	GCAATG	1 cut(s)	1383
BseMII	CTCAG	8 cut(s)	513, 543, 791, 1118, 1164, 1455, 2045, 2419
BseNI	ACTGG	3 cut(s)	1894, 2004, 2598
BseRI	GAGGAG	1 cut(s)	1481
BseSI	GKGCMC	2 cut(s)	274, 2071
BseXI	GCAGC	8 cut(s)	168, 743, 800, 934, 1700, 2204, 2601, 2629
BseYI	CCCAGC	2 cut(s)	791, 1479
BsgI	GTGCAG	2 cut(s)	960, 1518
Bsh1236I	CGCG	3 cut(s)	63, 1733, 2556
BshFI	GGCC	8 cut(s)	97, 272, 1079, 1140, 2135, 2269, 2297, 2720
BsiHKAI	GWGCWC	2 cut(s)	61, 2406
BsiSI	CCGG	2 cut(s)	1137, 1338
BslFI	GGGAC	4 cut(s)	544, 808, 1610, 2737
BslI	CCNNNNNNNGG	8 cut(s)	527, 583, 932, 1863, 1910, 1931, 2665, 2781
BsmBI	CGTCTC	2 cut(s)	1440, 2573
BsmFI	GGGAC	4 cut(s)	544, 808, 1610, 2737
BsmI	GAATGC	3 cut(s)	149, 1622, 1690
BsnI	GGCC	8 cut(s)	97, 272, 1079, 1140, 2135, 2269, 2297, 2720
Bso31I	GGTCTC	3 cut(s)	468, 620, 1951
Bsp120I	GGGCCC	1 cut(s)	270
Bsp1286I	GDGCHC	5 cut(s)	61, 274, 974, 2071, 2406
Bsp143I	GATC	9 cut(s)	517, 653, 1186, 1240, 1390, 2233, 2371, 2446, 2771
Bsp68I	TCGCGA	1 cut(s)	63
BspACI	CCGC	3 cut(s)	184, 386, 2629
BspANI	GGCC	8 cut(s)	97, 272, 1079, 1140, 2135, 2269, 2297, 2720
BspCNI	CTCAG	8 cut(s)	514, 544, 790, 1119, 1163, 1456, 2044, 2418
BspFNI	CGCG	3 cut(s)	63, 1733, 2556
BspHI	TCATGA	1 cut(s)	1884
BspLI	GGNNCC	3 cut(s)	271, 272, 575
BspMAI	CTGCAG	3 cut(s)	924, 2083, 2619
BspMI	ACCTGC	1 cut(s)	1042
BspOI	GCTAGC	2 cut(s)	1109, 2624
BspPI	GGATC	5 cut(s)	512, 1385, 2228, 2366, 2766
BspTI	CTTAAG	1 cut(s)	1847
BspTNI	GGTCTC	3 cut(s)	468, 620, 1951
BsrDI	GCAATG	1 cut(s)	1383
BsrI	ACTGG	3 cut(s)	1894, 2004, 2598
BssECI	CCNNGG	4 cut(s)	1338, 1487, 1952, 2440
BssMI	GATC	9 cut(s)	517, 653, 1186, 1240, 1390, 2233, 2371, 2446, 2771
BssNI	GRCGYC	1 cut(s)	1410
BssSI	CACGAG	2 cut(s)	693, 2505
Bst2BI	CACGAG	2 cut(s)	693, 2505
Bst2UI	CCWGG	4 cut(s)	26, 1488, 1858, 1953
Bst4CI	ACNGT	4 cut(s)	382, 850, 1451, 1606
Bst6I	CTCTTC	2 cut(s)	60, 1578
BstACI	GRCGYC	1 cut(s)	1410
BstAFI	CTTAAG	1 cut(s)	1847
BstBAI	YACGTR	1 cut(s)	2662
BstDSI	CCRYGG	1 cut(s)	2440
BstENI	CCTNNNNNAGG	1 cut(s)	1908
BstF5I	GGATG	6 cut(s)	1281, 1321, 1357, 1713, 2062, 2786
BstFNI	CGCG	3 cut(s)	63, 1733, 2556
BstHHI	GCGC	5 cut(s)	1028, 1051, 1733, 1782, 2607
BstKTI	GATC	9 cut(s)	520, 656, 1189, 1243, 1393, 2236, 2374, 2449, 2774
BstMBI	GATC	9 cut(s)	517, 653, 1186, 1240, 1390, 2233, 2371, 2446, 2771
BstMWI	GCNNNNNNNGC	8 cut(s)	950, 969, 1025, 1102, 1231, 1730, 1820, 2611
BstNI	CCWGG	4 cut(s)	26, 1488, 1858, 1953
BstPAI	GACNNNNGTC	1 cut(s)	1506
BstSCI	CCNGG	6 cut(s)	24, 1135, 1337, 1486, 1856, 1951
BstSFI	CTRYAG	6 cut(s)	892, 920, 1308, 2079, 2423, 2615
BstSLI	GKGCMC	2 cut(s)	274, 2071
BstUI	CGCG	3 cut(s)	63, 1733, 2556
BstV1I	GCAGC	8 cut(s)	168, 743, 800, 934, 1700, 2204, 2601, 2629
BstV2I	GAAGAC	4 cut(s)	27, 880, 1446, 2028
BstX2I	RGATCY	3 cut(s)	1186, 1240, 2771
BstXI	CCANNNNNNTGG	1 cut(s)	2392
BstYI	RGATCY	3 cut(s)	1186, 1240, 2771
Bsu36I	CCTNAGG	1 cut(s)	1464
BsuI	GTATCC	3 cut(s)	1378, 1510, 1639
BsuRI	GGCC	8 cut(s)	97, 272, 1079, 1140, 2135, 2269, 2297, 2720
BtgI	CCRYGG	1 cut(s)	2440
BtsCI	GGATG	6 cut(s)	1281, 1321, 1357, 1713, 2062, 2786
BtsI	GCAGTG	2 cut(s)	346, 769
BtsIMutI	CAGTG	7 cut(s)	346, 549, 769, 846, 1542, 2337, 2591
BtuMI	TCGCGA	1 cut(s)	63
BveI	ACCTGC	1 cut(s)	1042
CaiI	CAGNNNCTG	1 cut(s)	1157
CciI	TCATGA	1 cut(s)	1884
CfoI	GCGC	5 cut(s)	1028, 1051, 1733, 1782, 2607
Cfr13I	GGNCC	7 cut(s)	96, 270, 271, 1139, 2176, 2335, 2719
CseI	GACGC	4 cut(s)	1399, 2089, 2555, 2739
CsiI	ACCWGGT	1 cut(s)	24
Csp6I	GTAC	3 cut(s)	352, 1474, 2076
CviAII	CATG	9 cut(s)	358, 413, 878, 986, 1066, 1681, 1885, 2180, 2392
CviQI	GTAC	3 cut(s)	352, 1474, 2076
DpnI	GATC	9 cut(s)	519, 655, 1188, 1242, 1392, 2235, 2373, 2448, 2773
DpnII	GATC	9 cut(s)	517, 653, 1186, 1240, 1390, 2233, 2371, 2446, 2771
EaeI	YGGCCR	1 cut(s)	2133
Eam1104I	CTCTTC	2 cut(s)	60, 1578
EarI	CTCTTC	2 cut(s)	60, 1578
Ecl136II	GAGCTC	1 cut(s)	2404
Eco147I	AGGCCT	1 cut(s)	1079
Eco24I	GRGCYC	3 cut(s)	274, 974, 2406
Eco31I	GGTCTC	3 cut(s)	468, 620, 1951
Eco47I	GGWCC	2 cut(s)	2176, 2335
Eco53kI	GAGCTC	1 cut(s)	2404
Eco57I	CTGAAG	2 cut(s)	1175, 1983
Eco81I	CCTNAGG	1 cut(s)	1464
EcoICRI	GAGCTC	1 cut(s)	2404
EcoNI	CCTNNNNNAGG	1 cut(s)	1908
EcoO109I	RGGNCCY	3 cut(s)	96, 270, 2719
EcoRII	CCWGG	4 cut(s)	24, 1486, 1856, 1951
EcoT22I	ATGCAT	1 cut(s)	149
EcoT38I	GRGCYC	3 cut(s)	274, 974, 2406
Esp3I	CGTCTC	2 cut(s)	1440, 2573
FaeI	CATG	9 cut(s)	361, 416, 881, 989, 1069, 1684, 1888, 2183, 2395
FalI	AAGNNNNNCTT	2 cut(s)	2555, 2587
FaqI	GGGAC	4 cut(s)	544, 808, 1610, 2737
FatI	CATG	9 cut(s)	357, 412, 877, 985, 1065, 1680, 1884, 2179, 2391
FauI	CCCGC	1 cut(s)	177
FauNDI	CATATG	2 cut(s)	325, 1726
FblI	GTMKAC	2 cut(s)	194, 750
Fnu4HI	GCNGC	8 cut(s)	182, 732, 814, 923, 1689, 2193, 2615, 2618
FokI	GGATG	6 cut(s)	1288, 1308, 1364, 1720, 2069, 2793
FriOI	GRGCYC	3 cut(s)	274, 974, 2406
Fsp4HI	GCNGC	8 cut(s)	182, 732, 814, 923, 1689, 2193, 2615, 2618
FspI	TGCGCA	2 cut(s)	1027, 1781
GlaI	GCGC	5 cut(s)	1027, 1050, 1732, 1781, 2606
GluI	GCNGC	8 cut(s)	182, 732, 814, 923, 1689, 2193, 2615, 2618
GsaI	CCCAGC	2 cut(s)	795, 1483
GsuI	CTGGAG	1 cut(s)	634
HaeIII	GGCC	8 cut(s)	97, 272, 1079, 1140, 2135, 2269, 2297, 2720
HapII	CCGG	2 cut(s)	1137, 1338
HgaI	GACGC	4 cut(s)	1399, 2089, 2555, 2739
HhaI	GCGC	5 cut(s)	1028, 1051, 1733, 1782, 2607
Hin1I	GRCGYC	1 cut(s)	1410
Hin1II	CATG	9 cut(s)	361, 416, 881, 989, 1069, 1684, 1888, 2183, 2395
Hin6I	GCGC	5 cut(s)	1026, 1049, 1731, 1780, 2605
HinP1I	GCGC	5 cut(s)	1026, 1049, 1731, 1780, 2605
HincII	GTYRAC	2 cut(s)	1854, 2167
HindII	GTYRAC	2 cut(s)	1854, 2167
HindIII	AAGCTT	1 cut(s)	2141
HpaI	GTTAAC	1 cut(s)	1854
HpaII	CCGG	2 cut(s)	1137, 1338
HphI	GGTGA	4 cut(s)	40, 248, 1463, 2381
Hpy166II	GTNNAC	8 cut(s)	195, 354, 378, 751, 1476, 1854, 2167, 2338
Hpy8I	GTNNAC	8 cut(s)	195, 354, 378, 751, 1476, 1854, 2167, 2338
HpyCH4III	ACNGT	4 cut(s)	382, 850, 1451, 1606
HpyCH4IV	ACGT	3 cut(s)	350, 2223, 2661
HpyF10VI	GCNNNNNNNGC	8 cut(s)	950, 969, 1025, 1102, 1231, 1730, 1820, 2611
HpySE526I	ACGT	3 cut(s)	350, 2223, 2661
Hsp92I	GRCGYC	1 cut(s)	1410
Hsp92II	CATG	9 cut(s)	361, 416, 881, 989, 1069, 1684, 1888, 2183, 2395
HspAI	GCGC	5 cut(s)	1026, 1049, 1731, 1780, 2605
KspAI	GTTAAC	1 cut(s)	1854
Kzo9I	GATC	9 cut(s)	517, 653, 1186, 1240, 1390, 2233, 2371, 2446, 2771
LmnI	GCTCC	7 cut(s)	50, 112, 573, 586, 653, 1619, 2189
Lsp1109I	GCAGC	8 cut(s)	168, 743, 800, 934, 1700, 2204, 2601, 2629
LweI	GCATC	7 cut(s)	33, 128, 156, 782, 1698, 2523, 2807
MabI	ACCWGGT	1 cut(s)	24
MaeII	ACGT	3 cut(s)	350, 2223, 2661
MaeIII	GTNAC	3 cut(s)	1036, 2113, 2639
MalI	GATC	9 cut(s)	519, 655, 1188, 1242, 1392, 2235, 2373, 2448, 2773
MboI	GATC	9 cut(s)	517, 653, 1186, 1240, 1390, 2233, 2371, 2446, 2771
MfeI	CAATTG	2 cut(s)	9, 1091
MflI	RGATCY	3 cut(s)	1186, 1240, 2771
MhlI	GDGCHC	5 cut(s)	61, 274, 974, 2071, 2406
MlsI	TGGCCA	1 cut(s)	2135
MluNI	TGGCCA	1 cut(s)	2135
MlyI	GAGTC	7 cut(s)	832, 1289, 1382, 1478, 1516, 1595, 2591
MmeI	TCCRAC	4 cut(s)	1261, 1329, 1588, 1844
Mox20I	TGGCCA	1 cut(s)	2135
Mph1103I	ATGCAT	1 cut(s)	149
MroXI	GAANNNNTTC	4 cut(s)	468, 1803, 2026, 2545
MscI	TGGCCA	1 cut(s)	2135
MseI	TTAA	8 cut(s)	101, 435, 803, 1086, 1637, 1848, 1853, 2522
MslI	CAYNNNNRTG	3 cut(s)	411, 2330, 2390
Msp20I	TGGCCA	1 cut(s)	2135
MspA1I	CMGCKG	2 cut(s)	791, 2195
MspCI	CTTAAG	1 cut(s)	1847
MspI	CCGG	2 cut(s)	1137, 1338
MspR9I	CCNGG	6 cut(s)	26, 1137, 1339, 1488, 1858, 1953
MunI	CAATTG	2 cut(s)	9, 1091
Mva1269I	GAATGC	3 cut(s)	149, 1622, 1690
MvaI	CCWGG	4 cut(s)	26, 1488, 1858, 1953
MvnI	CGCG	3 cut(s)	63, 1733, 2556
MwoI	GCNNNNNNNGC	8 cut(s)	950, 969, 1025, 1102, 1231, 1730, 1820, 2611
NciI	CCSGG	2 cut(s)	1137, 1339
NdeI	CATATG	2 cut(s)	325, 1726
NdeII	GATC	9 cut(s)	517, 653, 1186, 1240, 1390, 2233, 2371, 2446, 2771
NheI	GCTAGC	2 cut(s)	1105, 2620
NlaIII	CATG	9 cut(s)	361, 416, 881, 989, 1069, 1684, 1888, 2183, 2395
NlaIV	GGNNCC	3 cut(s)	271, 272, 575
NmuCI	GTSAC	2 cut(s)	1036, 2113
NruI	TCGCGA	1 cut(s)	63
NsbI	TGCGCA	2 cut(s)	1027, 1781
NsiI	ATGCAT	1 cut(s)	149
PagI	TCATGA	1 cut(s)	1884
PceI	AGGCCT	1 cut(s)	1079
PctI	GAATGC	3 cut(s)	149, 1622, 1690
PdmI	GAANNNNTTC	4 cut(s)	468, 1803, 2026, 2545
PfeI	GAWTC	6 cut(s)	899, 1772, 1799, 2000, 2027, 2381
PflMI	CCANNNNNTGG	2 cut(s)	1863, 2665
PkrI	GCNGC	8 cut(s)	183, 733, 815, 924, 1690, 2194, 2616, 2619
PleI	GAGTC	7 cut(s)	832, 1289, 1381, 1477, 1515, 1594, 2591
PpsI	GAGTC	7 cut(s)	832, 1289, 1381, 1477, 1515, 1594, 2591
Ppu21I	YACGTR	1 cut(s)	2662
PshAI	GACNNNNGTC	1 cut(s)	1506
Psp124BI	GAGCTC	1 cut(s)	2406
Psp6I	CCWGG	4 cut(s)	24, 1486, 1856, 1951
PspFI	CCCAGC	2 cut(s)	791, 1479
PspGI	CCWGG	4 cut(s)	24, 1486, 1856, 1951
PspN4I	GGNNCC	3 cut(s)	271, 272, 575
PspOMI	GGGCCC	1 cut(s)	270
PspPI	GGNCC	7 cut(s)	96, 270, 271, 1139, 2176, 2335, 2719
PstI	CTGCAG	3 cut(s)	924, 2083, 2619
PstNI	CAGNNNCTG	1 cut(s)	1157
PsuI	RGATCY	3 cut(s)	1186, 1240, 2771
PvuII	CAGCTG	2 cut(s)	791, 2195
RruI	TCGCGA	1 cut(s)	63
RsaI	GTAC	3 cut(s)	353, 1475, 2077
RsaNI	GTAC	3 cut(s)	352, 1474, 2076
RseI	CAYNNNNRTG	3 cut(s)	411, 2330, 2390
SacI	GAGCTC	1 cut(s)	2406
SaqAI	TTAA	8 cut(s)	101, 435, 803, 1086, 1637, 1848, 1853, 2522
SatI	GCNGC	8 cut(s)	182, 732, 814, 923, 1689, 2193, 2615, 2618
Sau3AI	GATC	9 cut(s)	517, 653, 1186, 1240, 1390, 2233, 2371, 2446, 2771
Sau96I	GGNCC	7 cut(s)	96, 270, 271, 1139, 2176, 2335, 2719
ScaI	AGTACT	1 cut(s)	2077
SchI	GAGTC	7 cut(s)	832, 1289, 1382, 1478, 1516, 1595, 2591
ScrFI	CCNGG	6 cut(s)	26, 1137, 1339, 1488, 1858, 1953
SduI	GDGCHC	5 cut(s)	61, 274, 974, 2071, 2406
SexAI	ACCWGGT	1 cut(s)	24
SfaNI	GCATC	7 cut(s)	33, 128, 156, 782, 1698, 2523, 2807
SfcI	CTRYAG	6 cut(s)	892, 920, 1308, 2079, 2423, 2615
SinI	GGWCC	2 cut(s)	2176, 2335
SmiMI	CAYNNNNRTG	3 cut(s)	411, 2330, 2390
SmlI	CTYRAG	5 cut(s)	1297, 1847, 1990, 2144, 2723
SmoI	CTYRAG	5 cut(s)	1297, 1847, 1990, 2144, 2723
SseBI	AGGCCT	1 cut(s)	1079
SsiI	CCGC	3 cut(s)	184, 386, 2629
SspI	AATATT	2 cut(s)	393, 1361
SstI	GAGCTC	1 cut(s)	2406
StuI	AGGCCT	1 cut(s)	1079
StyD4I	CCNGG	6 cut(s)	24, 1135, 1337, 1486, 1856, 1951
TaaI	ACNGT	4 cut(s)	382, 850, 1451, 1606
TaiI	ACGT	3 cut(s)	353, 2226, 2664
TaqI	TCGA	4 cut(s)	122, 232, 472, 681
TatI	WGTACW	1 cut(s)	2075
TfiI	GAWTC	6 cut(s)	899, 1772, 1799, 2000, 2027, 2381
Tru1I	TTAA	8 cut(s)	101, 435, 803, 1086, 1637, 1848, 1853, 2522
Tru9I	TTAA	8 cut(s)	101, 435, 803, 1086, 1637, 1848, 1853, 2522
TscAI	CASTG	7 cut(s)	346, 556, 769, 853, 1549, 2337, 2598
TseFI	GTSAC	2 cut(s)	1036, 2113
TseI	GCWGC	8 cut(s)	181, 731, 813, 922, 1688, 2192, 2614, 2617
Tsp45I	GTSAC	2 cut(s)	1036, 2113
TspDTI	ATGAA	9 cut(s)	141, 276, 374, 477, 1371, 1629, 1697, 2196, 2669
TspGWI	ACGGA	1 cut(s)	2393
TspRI	CASTG	7 cut(s)	346, 556, 769, 853, 1549, 2337, 2598
Van91I	CCANNNNNTGG	2 cut(s)	1863, 2665
Vha464I	CTTAAG	1 cut(s)	1847
VpaK11BI	GGWCC	2 cut(s)	2176, 2335
XagI	CCTNNNNNAGG	1 cut(s)	1908
XapI	RAATTY	3 cut(s)	742, 2256, 2276
XbaI	TCTAGA	3 cut(s)	1510, 1838, 2272
XmiI	GTMKAC	2 cut(s)	194, 750
XmnI	GAANNNNTTC	4 cut(s)	468, 1803, 2026, 2545
ZrmI	AGTACT	1 cut(s)	2077
Zsp2I	ATGCAT	1 cut(s)	149

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.