Rorug06G0034600
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Reverse (-)
4317777 .. 4325508
7732 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0034600.1

Sequence Viewer

Length: 1104 bp
ATGATCGACACACTAAGAATTCCAGCTATGTCTTCTTCAGCTTTGCAAACAACTGGTGAATCTAACAATCACAGTCTGAAAAACGGTGAAATGTATGCTGATGGCATTAACTGGGATGATCTTGGGTTTGGACTAATTCCAATCGATTACATGTACACCATGAAATGCTCCGACGGAGAAAACTTTTCACAAGGACATCTCTCTCCCTTTGGAAAGATTGAGCTTTGCCCATCTGCTGGAATATTGAATTATGGACAGGGACTATTCGAAGGTCTTAAGGCGACCAGAACAGAAGATGGTCGTATTATGCTGTTTCGGCCCCAAGAGAATGCTCTAAGAATGAAGATGGGTGCAGAGAGAATGTGCATGCCATCTCCATCCGTTGAGCAATTTGTTGATGCTGTGAAGCAAACAGTCTTCGCCAACAAGCGTTGGGTACCACCTCCAGGAAAAGGATCACTGTATATTAGGCCTTTGCTCGTGGGGAGTGGATCTAATCTGGGCTTGGGCCCGGGACTGGAGTATACATTCCTAATATTTGCTTCTCCAGTTGGTAATTATCACAAGGGAAGGGCAGCCCTCAATTTGTATGTTGAACATAAAATCCACAGAGCTACTCCTGGTGGAACTGGAGGTGTCAAATCTGTCACCAATTACTCACCTGTTTACCAAACACAACAGCAAGCAAGGGCCAAGGGGTTCTCTGATGTCTTATTCCTAGATTCTGCAACTGGTAAAAACATTGAGGAGATTGTAGCAGCTAACATTTTCATTCTGAAGGGTAATGTCATTTCAACTCCAACACTGAAACATGGAACTATCCTCCCTGGAGTAACCCGTAAAAGCATCATTGATATTGCCCTTGATTTTGGTTACCAGGTGGAGGAGCGTGTGATCCCAGTGGAGGATTTACTTGCAGCCGATGAAGCTTTCTGCACAGGAACTGCCGTGGTTGTCAACCCTATTGGCGCTGTAACTTATCAAGACAAGAGGGTTGAATACAAAACAGGAGGAGCGTTATGTCAGAAACTGTATGAAACGCTAACAGGAATCCAAACAGGTCGTCTTGAGGACAAGAAGGGATGGACCCTAGAGGTCAACTGA

Protein Analysis

367

Amino Acids

39.98

Weight (kDa)

6.61

Isoelectric Point (pI)

40.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aminotran_4 PF01063 87 - 323 5e-32 Amino-transferase class IV
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 436
AccB1I GGYRCC 1 cut(s) 436
AccB7I CCANNNNNTGG 1 cut(s) 236
AccI GTMKAC 1 cut(s) 524
AclWI GGATC 3 cut(s) 463, 499, 889
AcsI RAATTY 1 cut(s) 18
AcuI CTGAAG 2 cut(s) 21, 797
AfaI GTAC 2 cut(s) 155, 438
AfiI CCNNNNNNNGG 6 cut(s) 236, 446, 452, 517, 883, 904
AflII CTTAAG 1 cut(s) 275
AflIII ACRYGT 1 cut(s) 150
AgsI TTSAA 4 cut(s) 247, 596, 795, 998
AjnI CCWGG 4 cut(s) 445, 619, 826, 876
AloI GAACNNNNNNTCC 2 cut(s) 588, 620
AluBI AGCT 6 cut(s) 26, 41, 223, 614, 761, 929
AluI AGCT 6 cut(s) 26, 41, 223, 614, 761, 929
AlwI GGATC 3 cut(s) 463, 499, 889
AlwNI CAGNNNCTG 2 cut(s) 944, 1030
Ama87I CYCGRG 1 cut(s) 511
AoxI GGCC 4 cut(s) 317, 470, 508, 690
ApaI GGGCCC 1 cut(s) 512
ApeKI GCWGC 3 cut(s) 575, 758, 917
ApoI RAATTY 1 cut(s) 18
ArsI GACNNNNNNTTYG 2 cut(s) 1048, 1080
Asp718I GGTACC 1 cut(s) 436
AspLEI GCGC 1 cut(s) 971
AspS9I GGNCC 5 cut(s) 318, 508, 509, 690, 1086
AsuC2I CCSGG 2 cut(s) 512, 513
AsuHPI GGTGA 4 cut(s) 68, 98, 640, 651
AsuII TTCGAA 1 cut(s) 267
AvaI CYCGRG 1 cut(s) 511
AvaII GGWCC 1 cut(s) 1086
BaeGI GKGCMC 1 cut(s) 512
BanI GGYRCC 1 cut(s) 436
BanII GRGCYC 1 cut(s) 512
BauI CACGAG 1 cut(s) 479
BbsI GAAGAC 2 cut(s) 24, 409
BbvI GCAGC 3 cut(s) 587, 770, 929
BccI CCATC 7 cut(s) 95, 238, 290, 340, 379, 385, 1077
BceAI ACGGC 1 cut(s) 932
BciT130I CCWGG 4 cut(s) 447, 621, 828, 878
BcnI CCSGG 2 cut(s) 512, 513
BfaI CTAG 2 cut(s) 719, 1091
BfoI RGCGCY 1 cut(s) 972
BfrI CTTAAG 1 cut(s) 275
BisI GCNGC 3 cut(s) 576, 759, 918
BlsI GCNGC 3 cut(s) 577, 760, 919
Bme1390I CCNGG 6 cut(s) 447, 512, 513, 621, 828, 878
Bme18I GGWCC 1 cut(s) 1086
BmeT110I CYCGRG 1 cut(s) 511
BmgT120I GGNCC 5 cut(s) 318, 508, 509, 690, 1086
BmiI GGNNCC 4 cut(s) 320, 438, 510, 1088
BmrFI CCNGG 6 cut(s) 447, 512, 513, 621, 828, 878
BmrI ACTGGG 2 cut(s) 121, 893
BmsI GCATC 2 cut(s) 388, 855
BmuI ACTGGG 2 cut(s) 121, 893
BpiI GAAGAC 2 cut(s) 24, 409
BpmI CTGGAG 5 cut(s) 429, 531, 539, 651, 849
Bpu14I TTCGAA 1 cut(s) 267
BpuEI CTTGAG 1 cut(s) 1088
BpuMI CCSGG 2 cut(s) 512, 513
Bsa29I ATCGAT 1 cut(s) 144
BsaJI CCNNGG 4 cut(s) 511, 693, 826, 948
Bsc4I CCNNNNNNNGG 6 cut(s) 236, 446, 452, 517, 883, 904
Bse1I ACTGG 7 cut(s) 58, 116, 522, 548, 634, 736, 899
BseBI CCWGG 4 cut(s) 447, 621, 828, 878
BseCI ATCGAT 1 cut(s) 144
BseDI CCNNGG 4 cut(s) 511, 693, 826, 948
BseGI GGATG 3 cut(s) 121, 377, 1088
BseLI CCNNNNNNNGG 6 cut(s) 236, 446, 452, 517, 883, 904
BseNI ACTGG 7 cut(s) 58, 116, 522, 548, 634, 736, 899
BseRI GAGGAG 3 cut(s) 761, 899, 1026
BseSI GKGCMC 1 cut(s) 512
BseXI GCAGC 3 cut(s) 587, 770, 929
BsgI GTGCAG 2 cut(s) 372, 919
BshFI GGCC 4 cut(s) 319, 472, 510, 692
BshNI GGYRCC 1 cut(s) 436
BshVI ATCGAT 1 cut(s) 144
BsiHKCI CYCGRG 1 cut(s) 511
BsiSI CCGG 1 cut(s) 512
BslFI GGGAC 2 cut(s) 273, 528
BslI CCNNNNNNNGG 6 cut(s) 236, 446, 452, 517, 883, 904
BsmFI GGGAC 2 cut(s) 273, 528
BsmI GAATGC 1 cut(s) 334
BsnI GGCC 4 cut(s) 319, 472, 510, 692
BsoBI CYCGRG 1 cut(s) 511
Bsp119I TTCGAA 1 cut(s) 267
Bsp120I GGGCCC 1 cut(s) 508
Bsp1286I GDGCHC 1 cut(s) 512
Bsp1407I TGTACA 1 cut(s) 153
Bsp143I GATC 5 cut(s) 3, 118, 455, 491, 894
BspANI GGCC 4 cut(s) 319, 472, 510, 692
BspDI ATCGAT 1 cut(s) 144
BspLI GGNNCC 4 cut(s) 320, 438, 510, 1088
BspPI GGATC 3 cut(s) 463, 499, 889
BspT104I TTCGAA 1 cut(s) 267
BspT107I GGYRCC 1 cut(s) 436
BspTI CTTAAG 1 cut(s) 275
BsrGI TGTACA 1 cut(s) 153
BsrI ACTGG 7 cut(s) 58, 116, 522, 548, 634, 736, 899
BssECI CCNNGG 4 cut(s) 511, 693, 826, 948
BssMI GATC 5 cut(s) 3, 118, 455, 491, 894
BssNAI GTATAC 1 cut(s) 525
BssSI CACGAG 1 cut(s) 479
BssT1I CCWWGG 1 cut(s) 693
Bst1107I GTATAC 1 cut(s) 525
Bst2BI CACGAG 1 cut(s) 479
Bst2UI CCWGG 4 cut(s) 447, 621, 828, 878
Bst4CI ACNGT 5 cut(s) 74, 86, 415, 462, 1032
BstAFI CTTAAG 1 cut(s) 275
BstAUI TGTACA 1 cut(s) 153
BstBI TTCGAA 1 cut(s) 267
BstC8I GCNNGC 2 cut(s) 368, 684
BstDEI CTNAG 2 cut(s) 14, 335
BstDSI CCRYGG 1 cut(s) 948
BstEII GGTNACC 1 cut(s) 872
BstF5I GGATG 3 cut(s) 121, 377, 1088
BstH2I RGCGCY 1 cut(s) 972
BstHHI GCGC 1 cut(s) 971
BstKTI GATC 5 cut(s) 6, 121, 458, 494, 897
BstMBI GATC 5 cut(s) 3, 118, 455, 491, 894
BstMWI GCNNNNNNNGC 2 cut(s) 316, 926
BstNI CCWGG 4 cut(s) 447, 621, 828, 878
BstNSI RCATGY 2 cut(s) 154, 370
BstPI GGTNACC 1 cut(s) 872
BstSCI CCNGG 6 cut(s) 445, 510, 511, 619, 826, 876
BstSLI GKGCMC 1 cut(s) 512
BstV1I GCAGC 3 cut(s) 587, 770, 929
BstV2I GAAGAC 2 cut(s) 24, 409
BstX2I RGATCY 1 cut(s) 491
BstYI RGATCY 1 cut(s) 491
BstZ17I GTATAC 1 cut(s) 525
Bsu15I ATCGAT 1 cut(s) 144
BsuRI GGCC 4 cut(s) 319, 472, 510, 692
BsuTUI ATCGAT 1 cut(s) 144
BtgI CCRYGG 1 cut(s) 948
BtsCI GGATG 3 cut(s) 121, 377, 1088
BtsIMutI CAGTG 3 cut(s) 458, 803, 906
Cac8I GCNNGC 2 cut(s) 368, 684
CaiI CAGNNNCTG 2 cut(s) 944, 1030
CfoI GCGC 1 cut(s) 971
Cfr13I GGNCC 5 cut(s) 318, 508, 509, 690, 1086
Cfr9I CCCGGG 1 cut(s) 511
ClaI ATCGAT 1 cut(s) 144
CsiI ACCWGGT 1 cut(s) 876
Csp6I GTAC 2 cut(s) 154, 437
CviAII CATG 4 cut(s) 151, 160, 367, 812
CviQI GTAC 2 cut(s) 154, 437
DdeI CTNAG 2 cut(s) 14, 335
DpnI GATC 5 cut(s) 5, 120, 457, 493, 896
DpnII GATC 5 cut(s) 3, 118, 455, 491, 894
Eco130I CCWWGG 1 cut(s) 693
Eco147I AGGCCT 1 cut(s) 472
Eco24I GRGCYC 1 cut(s) 512
Eco47I GGWCC 1 cut(s) 1086
Eco57I CTGAAG 2 cut(s) 21, 797
Eco88I CYCGRG 1 cut(s) 511
Eco91I GGTNACC 1 cut(s) 872
EcoO65I GGTNACC 1 cut(s) 872
EcoRI GAATTC 1 cut(s) 18
EcoRII CCWGG 4 cut(s) 445, 619, 826, 876
EcoT14I CCWWGG 1 cut(s) 693
EcoT38I GRGCYC 1 cut(s) 512
ErhI CCWWGG 1 cut(s) 693
FaeI CATG 4 cut(s) 154, 163, 370, 815
FaqI GGGAC 2 cut(s) 273, 528
FatI CATG 4 cut(s) 150, 159, 366, 811
FblI GTMKAC 1 cut(s) 524
Fnu4HI GCNGC 3 cut(s) 576, 759, 918
FokI GGATG 3 cut(s) 128, 364, 1095
FriOI GRGCYC 1 cut(s) 512
Fsp4HI GCNGC 3 cut(s) 576, 759, 918
FspBI CTAG 2 cut(s) 719, 1091
GlaI GCGC 1 cut(s) 970
GluI GCNGC 3 cut(s) 576, 759, 918
GsuI CTGGAG 5 cut(s) 429, 531, 539, 651, 849
HaeII RGCGCY 1 cut(s) 972
HaeIII GGCC 4 cut(s) 319, 472, 510, 692
HapII CCGG 1 cut(s) 512
HhaI GCGC 1 cut(s) 971
Hin1II CATG 4 cut(s) 154, 163, 370, 815
Hin6I GCGC 1 cut(s) 969
HinP1I GCGC 1 cut(s) 969
HincII GTYRAC 2 cut(s) 958, 1099
HindII GTYRAC 2 cut(s) 958, 1099
HindIII AAGCTT 1 cut(s) 927
HinfI GANTC 3 cut(s) 59, 722, 1050
HpaII CCGG 1 cut(s) 512
HphI GGTGA 4 cut(s) 68, 98, 640, 651
Hpy166II GTNNAC 5 cut(s) 156, 525, 667, 958, 1099
Hpy188I TCNGA 5 cut(s) 78, 172, 706, 777, 1026
Hpy188III TCNNGA 2 cut(s) 983, 1067
Hpy8I GTNNAC 5 cut(s) 156, 525, 667, 958, 1099
Hpy99I CGWCG 1 cut(s) 176
HpyAV CCTTC 4 cut(s) 263, 564, 772, 1072
HpyCH4III ACNGT 5 cut(s) 74, 86, 415, 462, 1032
HpyCH4V TGCA 6 cut(s) 46, 353, 366, 728, 917, 936
HpyF10VI GCNNNNNNNGC 2 cut(s) 316, 926
HpyF3I CTNAG 2 cut(s) 14, 335
Hsp92II CATG 4 cut(s) 154, 163, 370, 815
HspAI GCGC 1 cut(s) 969
KpnI GGTACC 1 cut(s) 440
Kzo9I GATC 5 cut(s) 3, 118, 455, 491, 894
LmnI GCTCC 3 cut(s) 173, 886, 1013
Lsp1109I GCAGC 3 cut(s) 587, 770, 929
LweI GCATC 2 cut(s) 388, 855
MabI ACCWGGT 1 cut(s) 876
MaeI CTAG 2 cut(s) 719, 1091
MaeIII GTNAC 4 cut(s) 646, 832, 872, 973
MalI GATC 5 cut(s) 5, 120, 457, 493, 896
MboI GATC 5 cut(s) 3, 118, 455, 491, 894
MboII GAAGA 5 cut(s) 24, 27, 305, 355, 409
MflI RGATCY 1 cut(s) 491
MhlI GDGCHC 1 cut(s) 512
MluCI AATT 7 cut(s) 18, 135, 247, 389, 556, 583, 652
MmeI TCCRAC 2 cut(s) 195, 824
MseI TTAA 2 cut(s) 108, 276
MspCI CTTAAG 1 cut(s) 275
MspI CCGG 1 cut(s) 512
MspR9I CCNGG 6 cut(s) 447, 512, 513, 621, 828, 878
Mva1269I GAATGC 1 cut(s) 334
MvaI CCWGG 4 cut(s) 447, 621, 828, 878
MwoI GCNNNNNNNGC 2 cut(s) 316, 926
NciI CCSGG 2 cut(s) 512, 513
NdeII GATC 5 cut(s) 3, 118, 455, 491, 894
NlaIII CATG 4 cut(s) 154, 163, 370, 815
NlaIV GGNNCC 4 cut(s) 320, 438, 510, 1088
NmuCI GTSAC 1 cut(s) 646
NspI RCATGY 2 cut(s) 154, 370
NspV TTCGAA 1 cut(s) 267
PaeI GCATGC 1 cut(s) 370
PceI AGGCCT 1 cut(s) 472
PciI ACATGT 1 cut(s) 150
PctI GAATGC 1 cut(s) 334
PfeI GAWTC 3 cut(s) 59, 722, 1050
PflMI CCANNNNNTGG 1 cut(s) 236
PfoI TCCNGGA 1 cut(s) 445
PkrI GCNGC 3 cut(s) 577, 760, 919
PscI ACATGT 1 cut(s) 150
Psp6I CCWGG 4 cut(s) 445, 619, 826, 876
PspEI GGTNACC 1 cut(s) 872
PspGI CCWGG 4 cut(s) 445, 619, 826, 876
PspN4I GGNNCC 4 cut(s) 320, 438, 510, 1088
PspOMI GGGCCC 1 cut(s) 508
PspPI GGNCC 5 cut(s) 318, 508, 509, 690, 1086
PstNI CAGNNNCTG 2 cut(s) 944, 1030
PsuI RGATCY 1 cut(s) 491
RsaI GTAC 2 cut(s) 155, 438
RsaNI GTAC 2 cut(s) 154, 437
SaqAI TTAA 2 cut(s) 108, 276
SatI GCNGC 3 cut(s) 576, 759, 918
Sau3AI GATC 5 cut(s) 3, 118, 455, 491, 894
Sau96I GGNCC 5 cut(s) 318, 508, 509, 690, 1086
ScrFI CCNGG 6 cut(s) 447, 512, 513, 621, 828, 878
SduI GDGCHC 1 cut(s) 512
SexAI ACCWGGT 1 cut(s) 876
SfaNI GCATC 2 cut(s) 388, 855
SfuI TTCGAA 1 cut(s) 267
SinI GGWCC 1 cut(s) 1086
SmaI CCCGGG 1 cut(s) 513
SmlI CTYRAG 2 cut(s) 275, 1067
SmoI CTYRAG 2 cut(s) 275, 1067
SphI GCATGC 1 cut(s) 370
Sse9I AATT 7 cut(s) 18, 135, 247, 389, 556, 583, 652
SseBI AGGCCT 1 cut(s) 472
SspI AATATT 2 cut(s) 243, 537
SspMI CTAG 2 cut(s) 719, 1091
StuI AGGCCT 1 cut(s) 472
StyD4I CCNGG 6 cut(s) 445, 510, 511, 619, 826, 876
StyI CCWWGG 1 cut(s) 693
TaaI ACNGT 5 cut(s) 74, 86, 415, 462, 1032
TaqI TCGA 3 cut(s) 6, 144, 267
TasI AATT 7 cut(s) 18, 135, 247, 389, 556, 583, 652
TatI WGTACW 1 cut(s) 153
TfiI GAWTC 3 cut(s) 59, 722, 1050
Tru1I TTAA 2 cut(s) 108, 276
Tru9I TTAA 2 cut(s) 108, 276
TscAI CASTG 3 cut(s) 465, 810, 906
TseFI GTSAC 1 cut(s) 646
TseI GCWGC 3 cut(s) 575, 758, 917
Tsp45I GTSAC 1 cut(s) 646
TspDTI ATGAA 5 cut(s) 176, 356, 760, 939, 1050
TspGWI ACGGA 2 cut(s) 189, 370
TspMI CCCGGG 1 cut(s) 511
TspRI CASTG 3 cut(s) 465, 810, 906
Van91I CCANNNNNTGG 1 cut(s) 236
Vha464I CTTAAG 1 cut(s) 275
VpaK11BI GGWCC 1 cut(s) 1086
XapI RAATTY 1 cut(s) 18
XceI RCATGY 2 cut(s) 154, 370
XmaI CCCGGG 1 cut(s) 511
XmiI GTMKAC 1 cut(s) 524
XspI CTAG 2 cut(s) 719, 1091
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.