Rmu_sc0003646.1_g000001

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003646.1
OG0000018
Physical Location & Seq
Reverse (-)
507 .. 3437
2931 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003646.1_g000001.1.cds

Sequence Viewer

Length: 2931 bp
atggctgagacacttatctctgtgcttctagagcaactggcttcaatagtgtttgaacacacaaaacaagcggtgacactcgttttgaatgctgaggaagatgttcatagtttccgcagcaatctcgaaaccattcaagctgtgctggaggatgcagagaagaaacaagtgacggaggccagagtgagagactggttgcagaagctcaaagatgtatcgtacgagatggacgacgtcctagacgagtggaacactgaaattttgaaacaacaagtggaggaaggcaagaagaaggtatgtttccccatgccctctggttgcttttgtgttggccaagtcaataaggtcattcatcatcataacattgctaaaaggataaaggaactgaatgagaggttaagtttaattgctgctgagcgagaaatgtacggctttcatcaatccacaataggtggccatgatgatcagcagcttattcaacgacagaagacttcatctttggtcgatatatctatgatatttggccgagaagaagaaaaagagatgttgttgagcaagttgttgagagagagtaaccaagatggggggaagctccttgtcatccctattgtagggatgggagggatggggaaaacaactcttgcccaagatgcctataacgatgaaaaggttgcagcccattttgatcagaaagtatgggtttgtgtctcagacccttttgatgagatcaagattgctaaagcgatcattgaaagtctcgtaggaaccccaaacagttcaaatgagttggaaattttattgcaatgtatcaagactcatatcgagaataagaagttacttcttgttctagatgatgtgtggaccgaagacgaaacaaagtgggaaaatttgaaactaccaataataatgcaaggttgtgaagtaggaagttcaatactggtgaccacgcgaaaacaagaggttgctaaaattatgagagcaaccaacaacatgatccatttagatgagttgaattataaggattgtttggctttgttcaatagcattgcgtttttggatagggatgaagatgaggctgatgagttgggagatattggtaagaaaattgtgaaacggtgtaaaggtttgcctcttgctgcaaagactttaggtagtctagtgtggtataagaaaacaagaaaggaatgggaggatgttctgaagagtgagatatgggaattagaaaaagttgagcaacatgttttccgaccactgttgcttagttattatgatttggcccctgcagtcaaaaggtgtcttttgtattgtgcaatatttcccaaagattatgagttcctaaaaaataatttgattgatatttggatgtcacaaaattatctttattcaaagggaataaaagaaaagagaagaataggtcaaaattattttgagagtctagcaatgcggtctttctttcaagattttaaaaaagataatatgggaaatgtttatgggtgcaaaatgcatgatatagtgcatgactttgtgcagtttcttacccaaaaagaatgcactattatagaagcagtcaagggtgctaatcaaagagtggagctaccgggtgattataaggttcgtcatttgactttaacaagtttacccgaaggtccactttcattttctacttcatttgacaactgcaaaaatatgcgaaccctcacactccttgattcaagcattacagccataagccccggttcaattatgcaaatgaaatgccttaggacattgaatttgagtggtaactggagatccggtaacaagctgaatgaagttccaaaagagattggtgaattgattcatttgagatatatggatttgtcttggagtcgtaatttaaaagaattaccggatgctgtgtgtgatttatacaatctacaaactctggacgtttcgttctgtcagcaacttgagaaactacccaaggcaatgggaaagttgattaacttgaagcatctatatgttgaatggtgtgggaggctgaggtacttaccgaaagggattgggagtttgaaaagtctgcaagtactagacatgttttatgtatgtgagggtgatgatgatgaagcattgaaattaggagatctcggaatcatggaccagcttcaggggagcctttctatagaaagattggggaataaggatgatgcgagtgagattgagaaagcacagttggggaataaggagcacctctccgaattgcgagtatttttccaggaaggagatttggggaataaggatgatgcgagtgagattgagaaagcacagttggggaataaggagcacctctccgaattgcgagtatttttccaggaaggagatgaagagcagagaaaaggtgatgaagaaatagtgaaagcattgcaaccacatcacaatttggaatctttatccattttgtattgccaaattggcaccaccgagtctctctattggatcaattctttacgcaatttgagaagacttgttctcgatgggtggagattttgtgaatttttgcctcctcttggaaaattgccatcgcttgaaattctgaagataggggggatggagaaagtgaaaaaggtgggagttgaatttctgggaatagaagaagaagaagaacaagtctcaggaattctattccccaaattgaaacaacttactttcatatggatgtacaactgggaagagtgggcctttgtttctgaaatcacaataatgccacgcctttctgagttgcaaattgagcgttgcccaaagctaaaagcactgccagagttcctgtacaagatagaagcactgcgtactctgaagatcgaagattgtgacattctggaaggagaatacgaaaaaggcgtggggaaggagtggcacaacatttctcacatcccaaacctcacaattggatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

976

Amino Acids

112.06

Weight (kDa)

5.36

Isoelectric Point (pI)

44.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1017, 1608
AatII GACGTC 1 cut(s) 237
AccB1I GGYRCC 1 cut(s) 2453
AccII CGCG 1 cut(s) 949
AciI CCGC 3 cut(s) 71, 115, 1444
AclWI GGATC 3 cut(s) 988, 1785, 2483
AcoI YGGCCR 3 cut(s) 331, 454, 523
AcsI RAATTY 8 cut(s) 258, 792, 886, 1771, 2531, 2568, 2615, 2655
AcuI CTGAAG 4 cut(s) 1220, 2129, 2594, 2852
AcyI GRCGYC 1 cut(s) 234
AfaI GTAC 7 cut(s) 221, 428, 2027, 2067, 2699, 2807, 2827
AfiI CCNNNNNNNGG 4 cut(s) 583, 611, 2146, 2546
AflIII ACRYGT 2 cut(s) 1237, 2073
AjnI CCWGG 2 cut(s) 2253, 2349
AjuI GAANNNNNNNTTGG 4 cut(s) 2195, 2227, 2291, 2323
AloI GAACNNNNNNTCC 2 cut(s) 1919, 1951
AluBI AGCT 8 cut(s) 140, 205, 472, 592, 1594, 1804, 2143, 2782
AluI AGCT 8 cut(s) 140, 205, 472, 592, 1594, 1804, 2143, 2782
Alw21I GWGCWC 2 cut(s) 2229, 2325
Alw26I GTCTC 6 cut(s) 2, 183, 712, 761, 2469, 2653
AlwI GGATC 3 cut(s) 988, 1785, 2483
AoxI GGCC 6 cut(s) 177, 331, 454, 523, 1275, 2715
ApeKI GCWGC 5 cut(s) 117, 410, 469, 674, 1136
ApoI RAATTY 8 cut(s) 258, 792, 886, 1771, 2531, 2568, 2615, 2655
ArsI GACNNNNNNTTYG 6 cut(s) 67, 99, 481, 513, 1756, 1788
Asp700I GAANNNNTTC 3 cut(s) 102, 132, 1836
AspS9I GGNCC 5 cut(s) 861, 1276, 1646, 2137, 2715
AsuC2I CCSGG 2 cut(s) 1599, 1734
AsuHPI GGTGA 6 cut(s) 85, 952, 1613, 1841, 2105, 2390
AvaII GGWCC 3 cut(s) 861, 1646, 2137
AxyI CCTNAGG 1 cut(s) 1760
BalI TGGCCA 2 cut(s) 333, 456
BanI GGYRCC 1 cut(s) 2453
BbsI GAAGAC 3 cut(s) 494, 873, 2506
Bbv12I GWGCWC 2 cut(s) 2229, 2325
BbvCI CCTCAGC 2 cut(s) 93, 2021
BbvI GCAGC 5 cut(s) 129, 397, 481, 686, 1123
BccI CCATC 7 cut(s) 220, 575, 610, 619, 2507, 2566, 2581
BceAI ACGGC 1 cut(s) 445
BcgI CGANNNNNNTGC 2 cut(s) 106, 140
BciT130I CCWGG 2 cut(s) 2255, 2351
BclI TGATCA 2 cut(s) 463, 685
BcnI CCSGG 2 cut(s) 1599, 1734
BcoDI GTCTC 6 cut(s) 2, 183, 712, 761, 2469, 2653
BfaI CTAG 6 cut(s) 29, 239, 848, 1157, 1436, 2069
BfmI CTRYAG 2 cut(s) 1281, 2160
BglI GCCNNNNNGGC 1 cut(s) 2451
BglII AGATCT 1 cut(s) 2122
BisI GCNGC 5 cut(s) 118, 411, 470, 675, 1137
BlpI GCTNAGC 1 cut(s) 414
BlsI GCNGC 5 cut(s) 119, 412, 471, 676, 1138
BmcAI AGTACT 1 cut(s) 2067
Bme1390I CCNGG 4 cut(s) 1599, 1734, 2255, 2351
Bme18I GGWCC 3 cut(s) 861, 1646, 2137
BmgT120I GGNCC 5 cut(s) 861, 1276, 1646, 2137, 2715
BmiI GGNNCC 4 cut(s) 766, 1278, 2153, 2455
BmrFI CCNGG 4 cut(s) 1599, 1734, 2255, 2351
BmrI ACTGGG 1 cut(s) 2713
BmsI GCATC 6 cut(s) 142, 640, 1882, 2002, 2176, 2272
BmuI ACTGGG 1 cut(s) 2713
BpiI GAAGAC 3 cut(s) 494, 873, 2506
BplI GAGNNNNNCTC 4 cut(s) 2216, 2248, 2312, 2344
BpmI CTGGAG 2 cut(s) 167, 1807
Bpu10I CCTNAGC 2 cut(s) 93, 2021
Bpu1102I GCTNAGC 1 cut(s) 414
BpuEI CTTGAG 1 cut(s) 1970
BpuMI CCSGG 2 cut(s) 1599, 1734
BsaHI GRCGYC 1 cut(s) 234
BsaJI CCNNGG 2 cut(s) 1732, 1962
BsaWI WCCGGW 2 cut(s) 1793, 1888
BsaXI ACNNNNNCTCC 4 cut(s) 1780, 1810, 2512, 2542
Bsc4I CCNNNNNNNGG 4 cut(s) 583, 611, 2146, 2546
Bse1I ACTGG 5 cut(s) 42, 197, 942, 1790, 2708
Bse21I CCTNAGG 1 cut(s) 1760
Bse3DI GCAATG 6 cut(s) 363, 809, 1044, 1446, 1974, 2399
BseBI CCWGG 2 cut(s) 2255, 2351
BseDI CCNNGG 2 cut(s) 1732, 1962
BseLI CCNNNNNNNGG 4 cut(s) 583, 611, 2146, 2546
BseMI GCAATG 6 cut(s) 363, 809, 1044, 1446, 1974, 2399
BseMII CTCAG 6 cut(s) 84, 405, 723, 2012, 2664, 2745
BseNI ACTGG 5 cut(s) 42, 197, 942, 1790, 2708
BseRI GAGGAG 1 cut(s) 2532
BseXI GCAGC 5 cut(s) 129, 397, 481, 686, 1123
BsgI GTGCAG 1 cut(s) 1547
Bsh1236I CGCG 1 cut(s) 949
BshFI GGCC 6 cut(s) 179, 333, 456, 525, 1277, 2717
BshNI GGYRCC 1 cut(s) 2453
BsiHKAI GWGCWC 2 cut(s) 2229, 2325
BsiSI CCGG 4 cut(s) 1598, 1734, 1794, 1889
BsiWI CGTACG 1 cut(s) 219
BslI CCNNNNNNNGG 4 cut(s) 583, 611, 2146, 2546
BsmAI GTCTC 6 cut(s) 2, 183, 712, 761, 2469, 2653
BsmI GAATGC 2 cut(s) 94, 1553
BsnI GGCC 6 cut(s) 179, 333, 456, 525, 1277, 2717
Bsp1286I GDGCHC 2 cut(s) 2229, 2325
Bsp1407I TGTACA 2 cut(s) 2697, 2805
Bsp143I GATC 9 cut(s) 463, 685, 726, 744, 993, 1790, 2122, 2475, 2835
Bsp1720I GCTNAGC 1 cut(s) 414
BspACI CCGC 3 cut(s) 71, 115, 1444
BspANI GGCC 6 cut(s) 179, 333, 456, 525, 1277, 2717
BspCNI CTCAG 6 cut(s) 85, 406, 722, 2013, 2663, 2746
BspFNI CGCG 1 cut(s) 949
BspLI GGNNCC 4 cut(s) 766, 1278, 2153, 2455
BspMAI CTGCAG 1 cut(s) 1285
BspPI GGATC 3 cut(s) 988, 1785, 2483
BspQI GCTCTTC 1 cut(s) 2358
BspT107I GGYRCC 1 cut(s) 2453
BsrDI GCAATG 6 cut(s) 363, 809, 1044, 1446, 1974, 2399
BsrGI TGTACA 2 cut(s) 2697, 2805
BsrI ACTGG 5 cut(s) 42, 197, 942, 1790, 2708
BssECI CCNNGG 2 cut(s) 1732, 1962
BssMI GATC 9 cut(s) 463, 685, 726, 744, 993, 1790, 2122, 2475, 2835
BssNI GRCGYC 1 cut(s) 234
BssT1I CCWWGG 1 cut(s) 1962
Bst2UI CCWGG 2 cut(s) 2255, 2351
Bst4CI ACNGT 5 cut(s) 776, 1116, 1254, 2211, 2307
Bst6I CTCTTC 3 cut(s) 1196, 2358, 2703
BstACI GRCGYC 1 cut(s) 234
BstAUI TGTACA 2 cut(s) 2697, 2805
BstDEI CTNAG 9 cut(s) 6, 93, 414, 709, 1259, 1760, 2021, 2650, 2754
BstEII GGTNACC 1 cut(s) 940
BstENI CCTNNNNNAGG 1 cut(s) 609
BstFNI CGCG 1 cut(s) 949
BstKTI GATC 9 cut(s) 466, 688, 729, 747, 996, 1793, 2125, 2478, 2838
BstMAI GTCTC 6 cut(s) 2, 183, 712, 761, 2469, 2653
BstMBI GATC 9 cut(s) 463, 685, 726, 744, 993, 1790, 2122, 2475, 2835
BstMWI GCNNNNNNNGC 4 cut(s) 31, 650, 2451, 2767
BstNI CCWGG 2 cut(s) 2255, 2351
BstNSI RCATGY 2 cut(s) 1241, 2077
BstPI GGTNACC 1 cut(s) 940
BstSCI CCNGG 4 cut(s) 1597, 1732, 2253, 2349
BstSFI CTRYAG 2 cut(s) 1281, 2160
BstUI CGCG 1 cut(s) 949
BstV1I GCAGC 5 cut(s) 129, 397, 481, 686, 1123
BstV2I GAAGAC 3 cut(s) 494, 873, 2506
BstX2I RGATCY 2 cut(s) 1790, 2122
BstXI CCANNNNNNTGG 1 cut(s) 1969
BstYI RGATCY 2 cut(s) 1790, 2122
Bsu36I CCTNAGG 1 cut(s) 1760
BsuRI GGCC 6 cut(s) 179, 333, 456, 525, 1277, 2717
BtgZI GCGATG 1 cut(s) 2544
BtsI GCAGTG 2 cut(s) 2789, 2819
BtsIMutI CAGTG 4 cut(s) 252, 1250, 2789, 2819
Cfr13I GGNCC 5 cut(s) 861, 1276, 1646, 2137, 2715
Csp6I GTAC 7 cut(s) 220, 427, 2026, 2066, 2698, 2806, 2826
CviAII CATG 8 cut(s) 307, 458, 991, 1238, 1505, 1517, 2074, 2134
CviQI GTAC 7 cut(s) 220, 427, 2026, 2066, 2698, 2806, 2826
DdeI CTNAG 9 cut(s) 6, 93, 414, 709, 1259, 1760, 2021, 2650, 2754
DpnI GATC 9 cut(s) 465, 687, 728, 746, 995, 1792, 2124, 2477, 2837
DpnII GATC 9 cut(s) 463, 685, 726, 744, 993, 1790, 2122, 2475, 2835
DraI TTTAAA 2 cut(s) 1465, 1878
EaeI YGGCCR 3 cut(s) 331, 454, 523
Eam1104I CTCTTC 3 cut(s) 1196, 2358, 2703
EarI CTCTTC 3 cut(s) 1196, 2358, 2703
Eco130I CCWWGG 1 cut(s) 1962
Eco47I GGWCC 3 cut(s) 861, 1646, 2137
Eco57I CTGAAG 4 cut(s) 1220, 2129, 2594, 2852
Eco81I CCTNAGG 1 cut(s) 1760
Eco91I GGTNACC 1 cut(s) 940
EcoNI CCTNNNNNAGG 1 cut(s) 609
EcoO65I GGTNACC 1 cut(s) 940
EcoRI GAATTC 1 cut(s) 2655
EcoRII CCWGG 2 cut(s) 2253, 2349
EcoT14I CCWWGG 1 cut(s) 1962
EcoT22I ATGCAT 1 cut(s) 1506
ErhI CCWWGG 1 cut(s) 1962
FaeI CATG 8 cut(s) 310, 461, 994, 1241, 1508, 1520, 2077, 2137
FalI AAGNNNNNCTT 2 cut(s) 1635, 1667
FatI CATG 8 cut(s) 306, 457, 990, 1237, 1504, 1516, 2073, 2133
FauNDI CATATG 1 cut(s) 2690
FbaI TGATCA 2 cut(s) 463, 685
Fnu4HI GCNGC 5 cut(s) 118, 411, 470, 675, 1137
Fsp4HI GCNGC 5 cut(s) 118, 411, 470, 675, 1137
FspBI CTAG 6 cut(s) 29, 239, 848, 1157, 1436, 2069
GluI GCNGC 5 cut(s) 118, 411, 470, 675, 1137
GsuI CTGGAG 2 cut(s) 167, 1807
HaeIII GGCC 6 cut(s) 179, 333, 456, 525, 1277, 2717
HapII CCGG 4 cut(s) 1598, 1734, 1794, 1889
Hin1I GRCGYC 1 cut(s) 234
Hin1II CATG 8 cut(s) 310, 461, 994, 1241, 1508, 1520, 2077, 2137
HinfI GANTC 8 cut(s) 814, 1432, 1709, 1837, 1867, 2130, 2423, 2462
HpaII CCGG 4 cut(s) 1598, 1734, 1794, 1889
HphI GGTGA 6 cut(s) 85, 952, 1613, 1841, 2105, 2390
Hpy166II GTNNAC 3 cut(s) 861, 1637, 1649
Hpy8I GTNNAC 3 cut(s) 861, 1637, 1649
Hpy99I CGWCG 1 cut(s) 236
HpyAV CCTTC 7 cut(s) 275, 286, 1637, 2252, 2348, 2852, 2878
HpyCH4III ACNGT 5 cut(s) 776, 1116, 1254, 2211, 2307
HpyCH4IV ACGT 2 cut(s) 234, 1929
HpyF10VI GCNNNNNNNGC 4 cut(s) 31, 650, 2451, 2767
HpyF3I CTNAG 9 cut(s) 6, 93, 414, 709, 1259, 1760, 2021, 2650, 2754
HpySE526I ACGT 2 cut(s) 234, 1929
Hsp92I GRCGYC 1 cut(s) 234
Hsp92II CATG 8 cut(s) 310, 461, 994, 1241, 1508, 1520, 2077, 2137
Ksp22I TGATCA 2 cut(s) 463, 685
Kzo9I GATC 9 cut(s) 463, 685, 726, 744, 993, 1790, 2122, 2475, 2835
LguI GCTCTTC 1 cut(s) 2358
LmnI GCTCC 5 cut(s) 597, 1591, 2151, 2224, 2320
Lsp1109I GCAGC 5 cut(s) 129, 397, 481, 686, 1123
LweI GCATC 6 cut(s) 142, 640, 1882, 2002, 2176, 2272
MaeI CTAG 6 cut(s) 29, 239, 848, 1157, 1436, 2069
MaeII ACGT 2 cut(s) 234, 1929
MaeIII GTNAC 9 cut(s) 73, 169, 572, 834, 940, 1365, 1781, 1796, 2846
MalI GATC 9 cut(s) 465, 687, 728, 746, 995, 1792, 2124, 2477, 2837
MboI GATC 9 cut(s) 463, 685, 726, 744, 993, 1790, 2122, 2475, 2835
MfeI CAATTG 1 cut(s) 2922
MflI RGATCY 2 cut(s) 1790, 2122
MhlI GDGCHC 2 cut(s) 2229, 2325
MlsI TGGCCA 2 cut(s) 333, 456
MluNI TGGCCA 2 cut(s) 333, 456
MlyI GAGTC 4 cut(s) 808, 1441, 1876, 2471
MmeI TCCRAC 2 cut(s) 768, 1270
Mox20I TGGCCA 2 cut(s) 333, 456
Mph1103I ATGCAT 1 cut(s) 1506
MroXI GAANNNNTTC 3 cut(s) 102, 132, 1836
MscI TGGCCA 2 cut(s) 333, 456
MseI TTAA 6 cut(s) 398, 404, 1464, 1628, 1877, 1983
MslI CAYNNNNRTG 4 cut(s) 1002, 1998, 2693, 2738
Msp20I TGGCCA 2 cut(s) 333, 456
MspI CCGG 4 cut(s) 1598, 1734, 1794, 1889
MspR9I CCNGG 4 cut(s) 1599, 1734, 2255, 2351
MunI CAATTG 1 cut(s) 2922
Mva1269I GAATGC 2 cut(s) 94, 1553
MvaI CCWGG 2 cut(s) 2255, 2351
MvnI CGCG 1 cut(s) 949
MwoI GCNNNNNNNGC 4 cut(s) 31, 650, 2451, 2767
NciI CCSGG 2 cut(s) 1599, 1734
NdeI CATATG 1 cut(s) 2690
NdeII GATC 9 cut(s) 463, 685, 726, 744, 993, 1790, 2122, 2475, 2835
NlaIII CATG 8 cut(s) 310, 461, 994, 1241, 1508, 1520, 2077, 2137
NlaIV GGNNCC 4 cut(s) 766, 1278, 2153, 2455
NmeAIII GCCGAG 1 cut(s) 551
NmuCI GTSAC 5 cut(s) 73, 169, 940, 1365, 2846
NsiI ATGCAT 1 cut(s) 1506
NspI RCATGY 2 cut(s) 1241, 2077
PciI ACATGT 2 cut(s) 1237, 2073
PciSI GCTCTTC 1 cut(s) 2358
PcsI WCGNNNNNNNCGW 3 cut(s) 228, 240, 2874
PctI GAATGC 2 cut(s) 94, 1553
PdmI GAANNNNTTC 3 cut(s) 102, 132, 1836
PfeI GAWTC 4 cut(s) 1709, 1837, 2130, 2423
Pfl23II CGTACG 1 cut(s) 219
PflFI GACNNNGTC 1 cut(s) 233
PfoI TCCNGGA 2 cut(s) 2253, 2349
PkrI GCNGC 5 cut(s) 119, 412, 471, 676, 1138
PleI GAGTC 4 cut(s) 808, 1440, 1875, 2470
PpsI GAGTC 4 cut(s) 808, 1440, 1875, 2470
PscI ACATGT 2 cut(s) 1237, 2073
PsiI TTATAA 2 cut(s) 1017, 1608
Psp6I CCWGG 2 cut(s) 2253, 2349
PspEI GGTNACC 1 cut(s) 940
PspGI CCWGG 2 cut(s) 2253, 2349
PspLI CGTACG 1 cut(s) 219
PspN4I GGNNCC 4 cut(s) 766, 1278, 2153, 2455
PspPI GGNCC 5 cut(s) 861, 1276, 1646, 2137, 2715
PstI CTGCAG 1 cut(s) 1285
PsuI RGATCY 2 cut(s) 1790, 2122
PsyI GACNNNGTC 1 cut(s) 233
RsaI GTAC 7 cut(s) 221, 428, 2027, 2067, 2699, 2807, 2827
RsaNI GTAC 7 cut(s) 220, 427, 2026, 2066, 2698, 2806, 2826
RseI CAYNNNNRTG 4 cut(s) 1002, 1998, 2693, 2738
SapI GCTCTTC 1 cut(s) 2358
SaqAI TTAA 6 cut(s) 398, 404, 1464, 1628, 1877, 1983
SatI GCNGC 5 cut(s) 118, 411, 470, 675, 1137
Sau3AI GATC 9 cut(s) 463, 685, 726, 744, 993, 1790, 2122, 2475, 2835
Sau96I GGNCC 5 cut(s) 861, 1276, 1646, 2137, 2715
ScaI AGTACT 1 cut(s) 2067
SchI GAGTC 4 cut(s) 808, 1441, 1876, 2471
ScrFI CCNGG 4 cut(s) 1599, 1734, 2255, 2351
SduI GDGCHC 2 cut(s) 2229, 2325
SfaNI GCATC 6 cut(s) 142, 640, 1882, 2002, 2176, 2272
SfcI CTRYAG 2 cut(s) 1281, 2160
SinI GGWCC 3 cut(s) 861, 1646, 2137
SmiMI CAYNNNNRTG 4 cut(s) 1002, 1998, 2693, 2738
SmlI CTYRAG 1 cut(s) 1949
SmoI CTYRAG 1 cut(s) 1949
SsiI CCGC 3 cut(s) 71, 115, 1444
SspI AATATT 1 cut(s) 1314
SspMI CTAG 6 cut(s) 29, 239, 848, 1157, 1436, 2069
StyD4I CCNGG 4 cut(s) 1597, 1732, 2253, 2349
StyI CCWWGG 1 cut(s) 1962
TaaI ACNGT 5 cut(s) 776, 1116, 1254, 2211, 2307
TaiI ACGT 2 cut(s) 237, 1932
TaqI TCGA 5 cut(s) 126, 504, 822, 2511, 2838
TaqII GACCGA 1 cut(s) 878
TatI WGTACW 3 cut(s) 2065, 2697, 2805
TfiI GAWTC 4 cut(s) 1709, 1837, 2130, 2423
Tru1I TTAA 6 cut(s) 398, 404, 1464, 1628, 1877, 1983
Tru9I TTAA 6 cut(s) 398, 404, 1464, 1628, 1877, 1983
TscAI CASTG 4 cut(s) 259, 1257, 2796, 2826
TseFI GTSAC 5 cut(s) 73, 169, 940, 1365, 2846
TseI GCWGC 5 cut(s) 117, 410, 469, 674, 1136
Tsp45I GTSAC 5 cut(s) 73, 169, 940, 1365, 2846
TspGWI ACGGA 1 cut(s) 188
TspRI CASTG 4 cut(s) 259, 1257, 2796, 2826
Tth111I GACNNNGTC 1 cut(s) 233
VpaK11BI GGWCC 3 cut(s) 861, 1646, 2137
XagI CCTNNNNNAGG 1 cut(s) 609
XapI RAATTY 8 cut(s) 258, 792, 886, 1771, 2531, 2568, 2615, 2655
XbaI TCTAGA 2 cut(s) 28, 847
XceI RCATGY 2 cut(s) 1241, 2077
XmnI GAANNNNTTC 3 cut(s) 102, 132, 1836
XspI CTAG 6 cut(s) 29, 239, 848, 1157, 1436, 2069
ZraI GACGTC 1 cut(s) 235
ZrmI AGTACT 1 cut(s) 2067
Zsp2I ATGCAT 1 cut(s) 1506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.