FvH4_7g22741

disease resistance protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
17887102 .. 17888667
1566 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g22741.t1

Sequence Viewer

Length: 1188 bp
ATGGGGCACAAGATAGAATTAGATGATGTTCAGAGCCCAAACTCTCATCAGTGGGAAGAACTGACCAAACCTTTACGTAATGGTGCTGTAGGCAGTAGGATATTGGTGACCACTAGAAAGGAGGAGGTTGTTACTTTAATGAAAGCAAATGCTGAATTGATGCCTTTGAAGAAGTTAGGTGAAACATTTTGTTTGTCATTGTTCTATTATCATGCAAATATAGATGAGAGTATTGTTTCAAAAGAGTTTCATGACATTGGGTTAGAGCTTGTTAAAAGGTGCAATGGTGGGTTGCCTCTTGCTACAAAGACGTTAGGAAGCCTCATACATCTTGAGTTGGATGATAGTGAGAGAAAAGAGGTGTCAAAAATTCGTTATTTGTGCTTGTTGCATGCAACCAAGAGTGATTCCTTGGTATCTCTTCTCTGCAATTATAAAAGATTACGTAGCTTGACAATGATAGATTCATTCAATCGATTCATTGGTTCAATATTTGAGTCGATAGTGCAACTGAAAAGCCTAGGGGCAATAACCTTGTGTCCCGAGTGGACCGTTGGTCTGGAAGAAATTCCGGAGACGATAGGTGGATTGATACACTTGAGGTATCTTGATTTATCCGGTAATAAAATGTTGGAAGAATTCCCTAGCGCCATGGGTAGCTTATACAACCTGCAAACCTTGCGACTTGTTGGTTGCAAGCTTATCCGAAGAGTAGACGTGGAAAGACTGATTAACTCGAGGCATCTTTATGTTAAACACTGTGATTCACTGAGGTTAATTAAAGGGATTGAGAAATTATCACATCTGCAAAGGTTAGATGAGTTTCGTCTCCGAGGGAGGAACAATTTGGAACATCTGAAAGACTTGAACCAGCTTCAAGGGAGTCTTACTATTCAGATTTATGGGCATCCCAAGATGGCAGATAATGCAGCTATACTGGTGAATAAGCCTCACCTCCTGCAAATGGAGTTGAATTTCATCTCGGCTGATGAACTCAGTCAAAGAGAAATTATGGATGGCTTACAGCCGCATGCATGTTTGGAATCTTTATTCATCTCCTGGTATAAAGGCGGCACCTTCTCCCATTGGTTGTCGTCTTTGCACAGCTTGAGAGTCCTCATCCTTAGATTTTGCCGAAACATAAAGACTTTGCCTCTGTTAGGGAAGGAAGAAACTAGCATCCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

396

Amino Acids

45.03

Weight (kDa)

8.29

Isoelectric Point (pI)

48.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 7 - 71 8.9e-06 NB-ARC domain
LRR_14 PF23598 193 - 375 3.7e-13 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 283 - 389 2e-20 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 435
Acc36I ACCTGC 1 cut(s) 678
AccB1I GGYRCC 1 cut(s) 1073
AccI GTMKAC 1 cut(s) 714
AccIII TCCGGA 1 cut(s) 571
AciI CCGC 2 cut(s) 1028, 1071
AcsI RAATTY 4 cut(s) 369, 567, 638, 973
AfiI CCNNNNNNNGG 2 cut(s) 964, 1160
AgsI TTSAA 7 cut(s) 169, 240, 472, 489, 868, 878, 973
AhdI GACNNNNNGTC 1 cut(s) 555
AjiI CACGTC 1 cut(s) 718
AjnI CCWGG 1 cut(s) 1058
AluBI AGCT 7 cut(s) 268, 450, 660, 700, 874, 932, 1107
AluI AGCT 7 cut(s) 268, 450, 660, 700, 874, 932, 1107
Alw26I GTCTC 2 cut(s) 569, 833
Ama87I CYCGRG 2 cut(s) 542, 736
Aor13HI TCCGGA 1 cut(s) 571
ApeKI GCWGC 1 cut(s) 929
ApoI RAATTY 4 cut(s) 369, 567, 638, 973
Asp700I GAANNNNTTC 1 cut(s) 567
AspA2I CCTAGG 1 cut(s) 520
AspLEI GCGC 1 cut(s) 650
AspS9I GGNCC 1 cut(s) 549
AsuHPI GGTGA 4 cut(s) 118, 191, 944, 952
AvaI CYCGRG 2 cut(s) 542, 736
AvaII GGWCC 1 cut(s) 549
AvrII CCTAGG 1 cut(s) 520
BaeGI GKGCMC 1 cut(s) 9
BanI GGYRCC 1 cut(s) 1073
BanII GRGCYC 1 cut(s) 38
BbvI GCAGC 1 cut(s) 941
BccI CCATC 2 cut(s) 910, 1010
BciT130I CCWGG 1 cut(s) 1060
BcoDI GTCTC 2 cut(s) 569, 833
BfaI CTAG 4 cut(s) 114, 521, 645, 1176
BfmI CTRYAG 1 cut(s) 87
BfoI RGCGCY 1 cut(s) 651
BfuAI ACCTGC 1 cut(s) 678
BisI GCNGC 3 cut(s) 930, 1028, 1072
BlnI CCTAGG 1 cut(s) 520
BlsI GCNGC 3 cut(s) 931, 1029, 1073
Bme1390I CCNGG 1 cut(s) 1060
Bme18I GGWCC 1 cut(s) 549
BmeRI GACNNNNNGTC 1 cut(s) 555
BmeT110I CYCGRG 2 cut(s) 542, 736
BmgBI CACGTC 1 cut(s) 718
BmgT120I GGNCC 1 cut(s) 549
BmiI GGNNCC 1 cut(s) 1075
BmrFI CCNGG 1 cut(s) 1060
BmsI GCATC 3 cut(s) 150, 751, 916
BpuEI CTTGAG 3 cut(s) 353, 619, 1129
Bsa29I ATCGAT 1 cut(s) 475
BsaAI YACGTR 2 cut(s) 77, 446
BsaJI CCNNGG 4 cut(s) 411, 520, 651, 832
BsaWI WCCGGW 2 cut(s) 571, 617
Bsc4I CCNNNNNNNGG 2 cut(s) 964, 1160
Bse1I ACTGG 1 cut(s) 942
Bse3DI GCAATG 1 cut(s) 289
BseAI TCCGGA 1 cut(s) 571
BseBI CCWGG 1 cut(s) 1060
BseCI ATCGAT 1 cut(s) 475
BseDI CCNNGG 4 cut(s) 411, 520, 651, 832
BseGI GGATG 5 cut(s) 346, 907, 1021, 1119, 1179
BseLI CCNNNNNNNGG 2 cut(s) 964, 1160
BseMI GCAATG 1 cut(s) 289
BseMII CTCAG 2 cut(s) 761, 1009
BseNI ACTGG 1 cut(s) 942
BseRI GAGGAG 1 cut(s) 137
BseSI GKGCMC 1 cut(s) 9
BseXI GCAGC 1 cut(s) 941
BshNI GGYRCC 1 cut(s) 1073
BshVI ATCGAT 1 cut(s) 475
BsiHKCI CYCGRG 2 cut(s) 542, 736
BsiSI CCGG 2 cut(s) 572, 618
BslFI GGGAC 1 cut(s) 525
BslI CCNNNNNNNGG 2 cut(s) 964, 1160
BsmAI GTCTC 2 cut(s) 569, 833
BsmBI CGTCTC 2 cut(s) 569, 833
BsmFI GGGAC 1 cut(s) 525
BsoBI CYCGRG 2 cut(s) 542, 736
Bsp1286I GDGCHC 2 cut(s) 9, 38
Bsp13I TCCGGA 1 cut(s) 571
Bsp19I CCATGG 1 cut(s) 651
BspACI CCGC 2 cut(s) 1028, 1071
BspCNI CTCAG 2 cut(s) 762, 1008
BspDI ATCGAT 1 cut(s) 475
BspEI TCCGGA 1 cut(s) 571
BspHI TCATGA 1 cut(s) 250
BspLI GGNNCC 1 cut(s) 1075
BspMI ACCTGC 1 cut(s) 678
BspT107I GGYRCC 1 cut(s) 1073
BsrDI GCAATG 1 cut(s) 289
BsrI ACTGG 1 cut(s) 942
BssECI CCNNGG 4 cut(s) 411, 520, 651, 832
BssT1I CCWWGG 3 cut(s) 411, 520, 651
Bst2UI CCWGG 1 cut(s) 1060
Bst4CI ACNGT 2 cut(s) 553, 761
Bst6I CTCTTC 2 cut(s) 426, 703
BstAPI GCANNNNNTGC 2 cut(s) 679, 926
BstBAI YACGTR 2 cut(s) 77, 446
BstC8I GCNNGC 3 cut(s) 393, 698, 1032
BstDEI CTNAG 3 cut(s) 770, 995, 1124
BstDSI CCRYGG 1 cut(s) 651
BstEII GGTNACC 1 cut(s) 106
BstENI CCTNNNNNAGG 1 cut(s) 1158
BstF5I GGATG 5 cut(s) 346, 907, 1021, 1119, 1179
BstH2I RGCGCY 1 cut(s) 651
BstHHI GCGC 1 cut(s) 650
BstMAI GTCTC 2 cut(s) 569, 833
BstMWI GCNNNNNNNGC 2 cut(s) 679, 926
BstNI CCWGG 1 cut(s) 1060
BstNSI RCATGY 3 cut(s) 395, 1034, 1038
BstPI GGTNACC 1 cut(s) 106
BstSCI CCNGG 1 cut(s) 1058
BstSFI CTRYAG 1 cut(s) 87
BstSLI GKGCMC 1 cut(s) 9
BstSNI TACGTA 2 cut(s) 77, 446
BstV1I GCAGC 1 cut(s) 941
Bsu15I ATCGAT 1 cut(s) 475
BsuTUI ATCGAT 1 cut(s) 475
BtgI CCRYGG 1 cut(s) 651
BtrI CACGTC 1 cut(s) 718
BtsCI GGATG 5 cut(s) 346, 907, 1021, 1119, 1179
BtsIMutI CAGTG 3 cut(s) 56, 757, 767
BveI ACCTGC 1 cut(s) 678
Cac8I GCNNGC 3 cut(s) 393, 698, 1032
CciI TCATGA 1 cut(s) 250
CfoI GCGC 1 cut(s) 650
Cfr13I GGNCC 1 cut(s) 549
ClaI ATCGAT 1 cut(s) 475
CviAII CATG 6 cut(s) 212, 251, 392, 652, 1031, 1035
DdeI CTNAG 3 cut(s) 770, 995, 1124
DriI GACNNNNNGTC 1 cut(s) 555
Eam1104I CTCTTC 2 cut(s) 426, 703
Eam1105I GACNNNNNGTC 1 cut(s) 555
EarI CTCTTC 2 cut(s) 426, 703
Eco105I TACGTA 2 cut(s) 77, 446
Eco130I CCWWGG 3 cut(s) 411, 520, 651
Eco24I GRGCYC 1 cut(s) 38
Eco47I GGWCC 1 cut(s) 549
Eco88I CYCGRG 2 cut(s) 542, 736
Eco91I GGTNACC 1 cut(s) 106
EcoNI CCTNNNNNAGG 1 cut(s) 1158
EcoO65I GGTNACC 1 cut(s) 106
EcoRI GAATTC 1 cut(s) 638
EcoRII CCWGG 1 cut(s) 1058
EcoT14I CCWWGG 3 cut(s) 411, 520, 651
EcoT22I ATGCAT 1 cut(s) 1036
EcoT38I GRGCYC 1 cut(s) 38
ErhI CCWWGG 3 cut(s) 411, 520, 651
Esp3I CGTCTC 2 cut(s) 569, 833
FaeI CATG 6 cut(s) 215, 254, 395, 655, 1034, 1038
FalI AAGNNNNNCTT 2 cut(s) 870, 902
FaqI GGGAC 1 cut(s) 525
FatI CATG 6 cut(s) 211, 250, 391, 651, 1030, 1034
FblI GTMKAC 1 cut(s) 714
Fnu4HI GCNGC 3 cut(s) 930, 1028, 1072
FokI GGATG 5 cut(s) 353, 894, 1028, 1106, 1166
FriOI GRGCYC 1 cut(s) 38
Fsp4HI GCNGC 3 cut(s) 930, 1028, 1072
FspBI CTAG 4 cut(s) 114, 521, 645, 1176
GlaI GCGC 1 cut(s) 649
GluI GCNGC 3 cut(s) 930, 1028, 1072
HaeII RGCGCY 1 cut(s) 651
HapII CCGG 2 cut(s) 572, 618
HhaI GCGC 1 cut(s) 650
Hin1II CATG 6 cut(s) 215, 254, 395, 655, 1034, 1038
Hin6I GCGC 1 cut(s) 648
HinP1I GCGC 1 cut(s) 648
HindIII AAGCTT 1 cut(s) 698
HinfI GANTC 8 cut(s) 407, 464, 477, 497, 764, 883, 1043, 1113
HpaII CCGG 2 cut(s) 572, 618
HphI GGTGA 4 cut(s) 118, 191, 944, 952
Hpy166II GTNNAC 2 cut(s) 549, 715
Hpy188I TCNGA 5 cut(s) 33, 707, 833, 858, 897
Hpy188III TCNNGA 6 cut(s) 251, 332, 542, 560, 572, 608
Hpy8I GTNNAC 2 cut(s) 549, 715
HpyAV CCTTC 2 cut(s) 1087, 1159
HpyCH4III ACNGT 2 cut(s) 553, 761
HpyCH4IV ACGT 4 cut(s) 76, 311, 445, 717
HpyF10VI GCNNNNNNNGC 2 cut(s) 679, 926
HpyF3I CTNAG 3 cut(s) 770, 995, 1124
HpySE526I ACGT 4 cut(s) 76, 311, 445, 717
Hsp92II CATG 6 cut(s) 215, 254, 395, 655, 1034, 1038
HspAI GCGC 1 cut(s) 648
Kpn2I TCCGGA 1 cut(s) 571
LpnPI CCDG 9 cut(s) 545, 585, 631, 683, 884, 923, 971, 1045, 1072
Lsp1109I GCAGC 1 cut(s) 941
LweI GCATC 3 cut(s) 150, 751, 916
MaeI CTAG 4 cut(s) 114, 521, 645, 1176
MaeII ACGT 4 cut(s) 76, 311, 445, 717
MaeIII GTNAC 2 cut(s) 106, 130
MboII GAAGA 7 cut(s) 68, 181, 413, 575, 647, 720, 1181
MhlI GDGCHC 2 cut(s) 9, 38
MlyI GAGTC 3 cut(s) 506, 892, 1122
MmeI TCCRAC 2 cut(s) 318, 612
Mph1103I ATGCAT 1 cut(s) 1036
MroI TCCGGA 1 cut(s) 571
MroXI GAANNNNTTC 1 cut(s) 567
MseI TTAA 6 cut(s) 137, 273, 732, 753, 776, 780
MslI CAYNNNNRTG 1 cut(s) 747
MspI CCGG 2 cut(s) 572, 618
MspR9I CCNGG 1 cut(s) 1060
MvaI CCWGG 1 cut(s) 1060
MwoI GCNNNNNNNGC 2 cut(s) 679, 926
NcoI CCATGG 1 cut(s) 651
NlaIII CATG 6 cut(s) 215, 254, 395, 655, 1034, 1038
NlaIV GGNNCC 1 cut(s) 1075
NmeAIII GCCGAG 1 cut(s) 962
NmuCI GTSAC 1 cut(s) 106
NsiI ATGCAT 1 cut(s) 1036
NspI RCATGY 3 cut(s) 395, 1034, 1038
PacI TTAATTAA 1 cut(s) 780
PaeI GCATGC 2 cut(s) 395, 1034
PaeR7I CTCGAG 1 cut(s) 736
PagI TCATGA 1 cut(s) 250
PdmI GAANNNNTTC 1 cut(s) 567
PfeI GAWTC 5 cut(s) 407, 464, 477, 764, 1043
PkrI GCNGC 3 cut(s) 931, 1029, 1073
PleI GAGTC 3 cut(s) 505, 891, 1121
PpsI GAGTC 3 cut(s) 505, 891, 1121
Ppu21I YACGTR 2 cut(s) 77, 446
PsiI TTATAA 1 cut(s) 435
Psp6I CCWGG 1 cut(s) 1058
PspEI GGTNACC 1 cut(s) 106
PspGI CCWGG 1 cut(s) 1058
PspN4I GGNNCC 1 cut(s) 1075
PspPI GGNCC 1 cut(s) 549
PspXI VCTCGAGB 1 cut(s) 736
RseI CAYNNNNRTG 1 cut(s) 747
SaqAI TTAA 6 cut(s) 137, 273, 732, 753, 776, 780
SatI GCNGC 3 cut(s) 930, 1028, 1072
Sau96I GGNCC 1 cut(s) 549
SchI GAGTC 3 cut(s) 506, 892, 1122
ScrFI CCNGG 1 cut(s) 1060
SduI GDGCHC 2 cut(s) 9, 38
SfaNI GCATC 3 cut(s) 150, 751, 916
SfcI CTRYAG 1 cut(s) 87
Sfr274I CTCGAG 1 cut(s) 736
SinI GGWCC 1 cut(s) 549
SlaI CTCGAG 1 cut(s) 736
SmiMI CAYNNNNRTG 1 cut(s) 747
SmlI CTYRAG 4 cut(s) 332, 598, 736, 1108
SmoI CTYRAG 4 cut(s) 332, 598, 736, 1108
SnaBI TACGTA 2 cut(s) 77, 446
SphI GCATGC 2 cut(s) 395, 1034
SsiI CCGC 2 cut(s) 1028, 1071
SspI AATATT 1 cut(s) 492
SspMI CTAG 4 cut(s) 114, 521, 645, 1176
StyD4I CCNGG 1 cut(s) 1058
StyI CCWWGG 3 cut(s) 411, 520, 651
TaaI ACNGT 2 cut(s) 553, 761
TaiI ACGT 4 cut(s) 79, 314, 448, 720
TaqI TCGA 3 cut(s) 475, 500, 737
TauI GCSGC 2 cut(s) 1030, 1074
TfiI GAWTC 5 cut(s) 407, 464, 477, 764, 1043
Tru1I TTAA 6 cut(s) 137, 273, 732, 753, 776, 780
Tru9I TTAA 6 cut(s) 137, 273, 732, 753, 776, 780
TscAI CASTG 3 cut(s) 56, 764, 774
TseFI GTSAC 1 cut(s) 106
TseI GCWGC 1 cut(s) 929
Tsp45I GTSAC 1 cut(s) 106
TspDTI ATGAA 7 cut(s) 155, 239, 456, 469, 967, 1005, 1042
TspRI CASTG 3 cut(s) 56, 764, 774
VpaK11BI GGWCC 1 cut(s) 549
XagI CCTNNNNNAGG 1 cut(s) 1158
XapI RAATTY 4 cut(s) 369, 567, 638, 973
XceI RCATGY 3 cut(s) 395, 1034, 1038
XhoI CTCGAG 1 cut(s) 736
XmaJI CCTAGG 1 cut(s) 520
XmiI GTMKAC 1 cut(s) 714
XmnI GAANNNNTTC 1 cut(s) 567
XspI CTAG 4 cut(s) 114, 521, 645, 1176
Zsp2I ATGCAT 1 cut(s) 1036
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.