disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 6 - 99 | 3.8e-22 | Rx N-terminal domain |
| NB-ARC | PF00931 | 176 - 334 | 7e-34 | NB-ARC domain |
| WHD_DRP | PF23559 | 418 - 487 | 1.9e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 578 - 823 | 1e-19 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 672 - 781 | 6.2e-13 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 756, 2214 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1376 |
| AatII | GACGTC | 1 cut(s) | 2053 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 226, 2183 |
| AccI | GTMKAC | 2 cut(s) | 2231, 2606 |
| AccII | CGCG | 3 cut(s) | 363, 1104, 1917 |
| AciI | CCGC | 6 cut(s) | 1573, 1915, 1917, 2004, 2096, 2145 |
| AclI | AACGTT | 3 cut(s) | 21, 34, 1970 |
| AcsI | RAATTY | 6 cut(s) | 786, 827, 1484, 2064, 2579, 2954 |
| AcuI | CTGAAG | 3 cut(s) | 27, 1203, 2960 |
| AcyI | GRCGYC | 1 cut(s) | 2050 |
| AfaI | GTAC | 3 cut(s) | 924, 1469, 1612 |
| AflIII | ACRYGT | 1 cut(s) | 485 |
| AhlI | ACTAGT | 3 cut(s) | 13, 637, 925 |
| AjnI | CCWGG | 1 cut(s) | 2182 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1862, 1894 |
| Alw21I | GWGCWC | 2 cut(s) | 147, 254 |
| Alw26I | GTCTC | 4 cut(s) | 157, 1945, 2291, 2632 |
| Ama87I | CYCGRG | 1 cut(s) | 1519 |
| AoxI | GGCC | 5 cut(s) | 457, 742, 1861, 2166, 3045 |
| ApeKI | GCWGC | 3 cut(s) | 1076, 1701, 2443 |
| ApoI | RAATTY | 6 cut(s) | 786, 827, 1484, 2064, 2579, 2954 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1536 |
| AspLEI | GCGC | 2 cut(s) | 908, 1104 |
| AspS9I | GGNCC | 7 cut(s) | 61, 458, 1861, 2072, 2134, 2167, 3045 |
| AsuHPI | GGTGA | 7 cut(s) | 40, 106, 293, 2119, 2815, 2991, 3047 |
| AvaI | CYCGRG | 1 cut(s) | 1519 |
| AvaII | GGWCC | 3 cut(s) | 61, 2072, 2134 |
| BbsI | GAAGAC | 1 cut(s) | 2972 |
| Bbv12I | GWGCWC | 2 cut(s) | 147, 254 |
| BbvI | GCAGC | 3 cut(s) | 1063, 1688, 2455 |
| BccI | CCATC | 7 cut(s) | 598, 787, 1055, 2158, 2503, 2878, 3077 |
| BceAI | ACGGC | 1 cut(s) | 2233 |
| BciT130I | CCWGG | 1 cut(s) | 2184 |
| BclI | TGATCA | 4 cut(s) | 2386, 2392, 2761, 2767 |
| BcoDI | GTCTC | 4 cut(s) | 157, 1945, 2291, 2632 |
| BcuI | ACTAGT | 3 cut(s) | 13, 637, 925 |
| BfoI | RGCGCY | 1 cut(s) | 909 |
| BisI | GCNGC | 5 cut(s) | 1077, 1702, 1918, 2097, 2444 |
| BlsI | GCNGC | 5 cut(s) | 1078, 1703, 1919, 2098, 2445 |
| BmcAI | AGTACT | 1 cut(s) | 924 |
| Bme1390I | CCNGG | 1 cut(s) | 2184 |
| Bme18I | GGWCC | 3 cut(s) | 61, 2072, 2134 |
| BmeT110I | CYCGRG | 1 cut(s) | 1519 |
| BmgT120I | GGNCC | 7 cut(s) | 61, 458, 1861, 2072, 2134, 2167, 3045 |
| BmiI | GGNNCC | 2 cut(s) | 857, 2778 |
| BmrFI | CCNGG | 1 cut(s) | 2184 |
| BmsI | GCATC | 5 cut(s) | 142, 1912, 2083, 2699, 2918 |
| BpiI | GAAGAC | 1 cut(s) | 2972 |
| BpmI | CTGGAG | 4 cut(s) | 108, 2431, 2806, 2993 |
| BpuEI | CTTGAG | 6 cut(s) | 131, 240, 1850, 1918, 2281, 2656 |
| Bsa29I | ATCGAT | 1 cut(s) | 804 |
| BsaBI | GATNNNNATC | 2 cut(s) | 2391, 2766 |
| BsaHI | GRCGYC | 1 cut(s) | 2050 |
| BsaJI | CCNNGG | 5 cut(s) | 51, 64, 1812, 1915, 2590 |
| BsaWI | WCCGGW | 1 cut(s) | 1804 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2332, 2362, 2991, 3021 |
| Bse118I | RCCGGY | 1 cut(s) | 179 |
| Bse1I | ACTGG | 7 cut(s) | 91, 495, 1632, 1717, 2414, 2474, 2849 |
| Bse8I | GATNNNNATC | 2 cut(s) | 2391, 2766 |
| BseBI | CCWGG | 1 cut(s) | 2184 |
| BseCI | ATCGAT | 1 cut(s) | 804 |
| BseDI | CCNNGG | 5 cut(s) | 51, 64, 1812, 1915, 2590 |
| BseGI | GGATG | 8 cut(s) | 157, 247, 609, 1308, 1417, 2315, 2690, 3060 |
| BseJI | GATNNNNATC | 2 cut(s) | 2391, 2766 |
| BseMII | CTCAG | 3 cut(s) | 884, 2015, 2493 |
| BseNI | ACTGG | 7 cut(s) | 91, 495, 1632, 1717, 2414, 2474, 2849 |
| BseRI | GAGGAG | 3 cut(s) | 81, 2428, 2803 |
| BseXI | GCAGC | 3 cut(s) | 1063, 1688, 2455 |
| BsgI | GTGCAG | 1 cut(s) | 1694 |
| Bsh1236I | CGCG | 3 cut(s) | 363, 1104, 1917 |
| Bsh1285I | CGRYCG | 2 cut(s) | 2235, 2610 |
| BshFI | GGCC | 5 cut(s) | 459, 744, 1863, 2168, 3047 |
| BshVI | ATCGAT | 1 cut(s) | 804 |
| BsiEI | CGRYCG | 2 cut(s) | 2235, 2610 |
| BsiHKAI | GWGCWC | 2 cut(s) | 147, 254 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1519 |
| BsiSI | CCGG | 4 cut(s) | 180, 1805, 2576, 2951 |
| BslFI | GGGAC | 1 cut(s) | 563 |
| BsmAI | GTCTC | 4 cut(s) | 157, 1945, 2291, 2632 |
| BsmFI | GGGAC | 1 cut(s) | 563 |
| BsnI | GGCC | 5 cut(s) | 459, 744, 1863, 2168, 3047 |
| BsoBI | CYCGRG | 1 cut(s) | 1519 |
| Bsp1286I | GDGCHC | 2 cut(s) | 147, 254 |
| Bsp1407I | TGTACA | 1 cut(s) | 1467 |
| Bsp143I | GATC | 6 cut(s) | 1385, 2100, 2386, 2392, 2761, 2767 |
| Bsp19I | CCATGG | 3 cut(s) | 51, 1812, 2590 |
| Bsp68I | TCGCGA | 1 cut(s) | 363 |
| BspACI | CCGC | 6 cut(s) | 1573, 1915, 1917, 2004, 2096, 2145 |
| BspANI | GGCC | 5 cut(s) | 459, 744, 1863, 2168, 3047 |
| BspCNI | CTCAG | 3 cut(s) | 883, 2016, 2494 |
| BspDI | ATCGAT | 1 cut(s) | 804 |
| BspFNI | CGCG | 3 cut(s) | 363, 1104, 1917 |
| BspHI | TCATGA | 2 cut(s) | 2389, 2764 |
| BspLI | GGNNCC | 2 cut(s) | 857, 2778 |
| BsrFI | RCCGGY | 1 cut(s) | 179 |
| BsrGI | TGTACA | 1 cut(s) | 1467 |
| BsrI | ACTGG | 7 cut(s) | 91, 495, 1632, 1717, 2414, 2474, 2849 |
| BssAI | RCCGGY | 1 cut(s) | 179 |
| BssECI | CCNNGG | 5 cut(s) | 51, 64, 1812, 1915, 2590 |
| BssMI | GATC | 6 cut(s) | 1385, 2100, 2386, 2392, 2761, 2767 |
| BssNI | GRCGYC | 1 cut(s) | 2050 |
| BssT1I | CCWWGG | 3 cut(s) | 51, 1812, 2590 |
| Bst2UI | CCWGG | 1 cut(s) | 2184 |
| Bst4CI | ACNGT | 2 cut(s) | 1495, 2650 |
| BstACI | GRCGYC | 1 cut(s) | 2050 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1840 |
| BstAUI | TGTACA | 1 cut(s) | 1467 |
| BstC8I | GCNNGC | 4 cut(s) | 181, 782, 1067, 2222 |
| BstDSI | CCRYGG | 4 cut(s) | 51, 1812, 1915, 2590 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 597, 2301, 2676 |
| BstF5I | GGATG | 8 cut(s) | 157, 247, 609, 1308, 1417, 2315, 2690, 3060 |
| BstFNI | CGCG | 3 cut(s) | 363, 1104, 1917 |
| BstH2I | RGCGCY | 1 cut(s) | 909 |
| BstHHI | GCGC | 2 cut(s) | 908, 1104 |
| BstKTI | GATC | 6 cut(s) | 1388, 2103, 2389, 2395, 2764, 2770 |
| BstMAI | GTCTC | 4 cut(s) | 157, 1945, 2291, 2632 |
| BstMBI | GATC | 6 cut(s) | 1385, 2100, 2386, 2392, 2761, 2767 |
| BstMCI | CGRYCG | 2 cut(s) | 2235, 2610 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 137, 167, 176, 1101, 1840 |
| BstNI | CCWGG | 1 cut(s) | 2184 |
| BstNSI | RCATGY | 4 cut(s) | 489, 1597, 2464, 2839 |
| BstSCI | CCNGG | 1 cut(s) | 2182 |
| BstUI | CGCG | 3 cut(s) | 363, 1104, 1917 |
| BstV1I | GCAGC | 3 cut(s) | 1063, 1688, 2455 |
| BstV2I | GAAGAC | 1 cut(s) | 2972 |
| Bsu15I | ATCGAT | 1 cut(s) | 804 |
| BsuRI | GGCC | 5 cut(s) | 459, 744, 1863, 2168, 3047 |
| BsuTUI | ATCGAT | 1 cut(s) | 804 |
| BtgI | CCRYGG | 4 cut(s) | 51, 1812, 1915, 2590 |
| BtsCI | GGATG | 8 cut(s) | 157, 247, 609, 1308, 1417, 2315, 2690, 3060 |
| BtsI | GCAGTG | 3 cut(s) | 2570, 2945, 3047 |
| BtsIMutI | CAGTG | 6 cut(s) | 84, 502, 878, 2570, 2945, 3047 |
| BtuMI | TCGCGA | 1 cut(s) | 363 |
| Cac8I | GCNNGC | 4 cut(s) | 181, 782, 1067, 2222 |
| CciI | TCATGA | 2 cut(s) | 2389, 2764 |
| CfoI | GCGC | 2 cut(s) | 908, 1104 |
| Cfr10I | RCCGGY | 1 cut(s) | 179 |
| Cfr13I | GGNCC | 7 cut(s) | 61, 458, 1861, 2072, 2134, 2167, 3045 |
| Cfr42I | CCGCGG | 1 cut(s) | 1918 |
| ClaI | ATCGAT | 1 cut(s) | 804 |
| Csp6I | GTAC | 3 cut(s) | 923, 1468, 1611 |
| CviQI | GTAC | 3 cut(s) | 923, 1468, 1611 |
| DpnI | GATC | 6 cut(s) | 1387, 2102, 2388, 2394, 2763, 2769 |
| DpnII | GATC | 6 cut(s) | 1385, 2100, 2386, 2392, 2761, 2767 |
| DraI | TTTAAA | 2 cut(s) | 765, 1140 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1376 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1376 |
| EciI | GGCGGA | 1 cut(s) | 2019 |
| Eco130I | CCWWGG | 3 cut(s) | 51, 1812, 2590 |
| Eco147I | AGGCCT | 1 cut(s) | 744 |
| Eco47I | GGWCC | 3 cut(s) | 61, 2072, 2134 |
| Eco57I | CTGAAG | 3 cut(s) | 27, 1203, 2960 |
| Eco88I | CYCGRG | 1 cut(s) | 1519 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 597, 2301, 2676 |
| EcoO109I | RGGNCCY | 2 cut(s) | 458, 1861 |
| EcoRI | GAATTC | 2 cut(s) | 2579, 2954 |
| EcoRII | CCWGG | 1 cut(s) | 2182 |
| EcoT14I | CCWWGG | 3 cut(s) | 51, 1812, 2590 |
| EcoT22I | ATGCAT | 1 cut(s) | 2933 |
| ErhI | CCWWGG | 3 cut(s) | 51, 1812, 2590 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 388, 420, 567, 599, 1271, 1303, 2037, 2069 |
| FaqI | GGGAC | 1 cut(s) | 563 |
| FauI | CCCGC | 1 cut(s) | 1580 |
| FauNDI | CATATG | 2 cut(s) | 987, 1004 |
| FbaI | TGATCA | 4 cut(s) | 2386, 2392, 2761, 2767 |
| FblI | GTMKAC | 2 cut(s) | 2231, 2606 |
| Fnu4HI | GCNGC | 5 cut(s) | 1077, 1702, 1918, 2097, 2444 |
| FokI | GGATG | 8 cut(s) | 164, 254, 616, 1315, 1424, 2302, 2677, 3047 |
| Fsp4HI | GCNGC | 5 cut(s) | 1077, 1702, 1918, 2097, 2444 |
| GlaI | GCGC | 2 cut(s) | 907, 1103 |
| GluI | GCNGC | 5 cut(s) | 1077, 1702, 1918, 2097, 2444 |
| GsuI | CTGGAG | 4 cut(s) | 108, 2431, 2806, 2993 |
| HaeII | RGCGCY | 1 cut(s) | 909 |
| HaeIII | GGCC | 5 cut(s) | 459, 744, 1863, 2168, 3047 |
| HapII | CCGG | 4 cut(s) | 180, 1805, 2576, 2951 |
| HhaI | GCGC | 2 cut(s) | 908, 1104 |
| Hin1I | GRCGYC | 1 cut(s) | 2050 |
| Hin6I | GCGC | 2 cut(s) | 906, 1102 |
| HinP1I | GCGC | 2 cut(s) | 906, 1102 |
| HincII | GTYRAC | 5 cut(s) | 19, 2232, 2541, 2607, 2916 |
| HindII | GTYRAC | 5 cut(s) | 19, 2232, 2541, 2607, 2916 |
| HpaI | GTTAAC | 1 cut(s) | 19 |
| HpaII | CCGG | 4 cut(s) | 180, 1805, 2576, 2951 |
| HphI | GGTGA | 7 cut(s) | 40, 106, 293, 2119, 2815, 2991, 3047 |
| Hpy166II | GTNNAC | 6 cut(s) | 19, 2232, 2491, 2541, 2607, 2916 |
| Hpy8I | GTNNAC | 6 cut(s) | 19, 2232, 2491, 2541, 2607, 2916 |
| Hpy99I | CGWCG | 5 cut(s) | 363, 1789, 2157, 2459, 2834 |
| HpyCH4III | ACNGT | 2 cut(s) | 1495, 2650 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 137, 167, 176, 1101, 1840 |
| Hsp92I | GRCGYC | 1 cut(s) | 2050 |
| HspAI | GCGC | 2 cut(s) | 906, 1102 |
| KroI | GCCGGC | 1 cut(s) | 179 |
| KroNI | GCCGGC | 1 cut(s) | 181 |
| Ksp22I | TGATCA | 4 cut(s) | 2386, 2392, 2761, 2767 |
| KspAI | GTTAAC | 1 cut(s) | 19 |
| KspI | CCGCGG | 1 cut(s) | 1918 |
| Kzo9I | GATC | 6 cut(s) | 1385, 2100, 2386, 2392, 2761, 2767 |
| LmnI | GCTCC | 3 cut(s) | 249, 1156, 2116 |
| Lsp1109I | GCAGC | 3 cut(s) | 1063, 1688, 2455 |
| LweI | GCATC | 5 cut(s) | 142, 1912, 2083, 2699, 2918 |
| MaeIII | GTNAC | 6 cut(s) | 82, 928, 1202, 1305, 1778, 2725 |
| MalI | GATC | 6 cut(s) | 1387, 2102, 2388, 2394, 2763, 2769 |
| MboI | GATC | 6 cut(s) | 1385, 2100, 2386, 2392, 2761, 2767 |
| MhlI | GDGCHC | 2 cut(s) | 147, 254 |
| MlyI | GAGTC | 2 cut(s) | 1022, 1543 |
| MmeI | TCCRAC | 3 cut(s) | 219, 1015, 1995 |
| Mph1103I | ATGCAT | 1 cut(s) | 2933 |
| MroNI | GCCGGC | 1 cut(s) | 179 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1536 |
| MslI | CAYNNNNRTG | 4 cut(s) | 986, 1908, 2388, 2763 |
| MspA1I | CMGCKG | 1 cut(s) | 1917 |
| MspI | CCGG | 4 cut(s) | 180, 1805, 2576, 2951 |
| MspR9I | CCNGG | 1 cut(s) | 2184 |
| MvaI | CCWGG | 1 cut(s) | 2184 |
| MvnI | CGCG | 3 cut(s) | 363, 1104, 1917 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 137, 167, 176, 1101, 1840 |
| NaeI | GCCGGC | 1 cut(s) | 181 |
| NcoI | CCATGG | 3 cut(s) | 51, 1812, 2590 |
| NdeI | CATATG | 2 cut(s) | 987, 1004 |
| NdeII | GATC | 6 cut(s) | 1385, 2100, 2386, 2392, 2761, 2767 |
| NgoMIV | GCCGGC | 1 cut(s) | 179 |
| NlaIV | GGNNCC | 2 cut(s) | 857, 2778 |
| NmuCI | GTSAC | 3 cut(s) | 82, 928, 1305 |
| NruI | TCGCGA | 1 cut(s) | 363 |
| NsiI | ATGCAT | 1 cut(s) | 2933 |
| NspI | RCATGY | 4 cut(s) | 489, 1597, 2464, 2839 |
| PaeR7I | CTCGAG | 1 cut(s) | 1519 |
| PagI | TCATGA | 2 cut(s) | 2389, 2764 |
| PceI | AGGCCT | 1 cut(s) | 744 |
| PciI | ACATGT | 1 cut(s) | 485 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 1781, 2429, 2804 |
| PdiI | GCCGGC | 1 cut(s) | 181 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1536 |
| PfeI | GAWTC | 9 cut(s) | 199, 814, 1628, 1750, 2192, 2324, 2498, 2699, 2873 |
| PflFI | GACNNNGTC | 2 cut(s) | 59, 1353 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 226, 2183 |
| PkrI | GCNGC | 5 cut(s) | 1078, 1703, 1919, 2098, 2445 |
| PleI | GAGTC | 2 cut(s) | 1021, 1543 |
| PpsI | GAGTC | 2 cut(s) | 1021, 1543 |
| PscI | ACATGT | 1 cut(s) | 485 |
| PsiI | TTATAA | 2 cut(s) | 756, 2214 |
| Psp1406I | AACGTT | 3 cut(s) | 21, 34, 1970 |
| Psp6I | CCWGG | 1 cut(s) | 2182 |
| PspGI | CCWGG | 1 cut(s) | 2182 |
| PspN4I | GGNNCC | 2 cut(s) | 857, 2778 |
| PspPI | GGNCC | 7 cut(s) | 61, 458, 1861, 2072, 2134, 2167, 3045 |
| PsyI | GACNNNGTC | 2 cut(s) | 59, 1353 |
| RruI | TCGCGA | 1 cut(s) | 363 |
| RsaI | GTAC | 3 cut(s) | 924, 1469, 1612 |
| RsaNI | GTAC | 3 cut(s) | 923, 1468, 1611 |
| RseI | CAYNNNNRTG | 4 cut(s) | 986, 1908, 2388, 2763 |
| SacII | CCGCGG | 1 cut(s) | 1918 |
| SalI | GTCGAC | 2 cut(s) | 2230, 2605 |
| SatI | GCNGC | 5 cut(s) | 1077, 1702, 1918, 2097, 2444 |
| Sau3AI | GATC | 6 cut(s) | 1385, 2100, 2386, 2392, 2761, 2767 |
| Sau96I | GGNCC | 7 cut(s) | 61, 458, 1861, 2072, 2134, 2167, 3045 |
| ScaI | AGTACT | 1 cut(s) | 924 |
| SchI | GAGTC | 2 cut(s) | 1022, 1543 |
| ScrFI | CCNGG | 1 cut(s) | 2184 |
| SduI | GDGCHC | 2 cut(s) | 147, 254 |
| SfaNI | GCATC | 5 cut(s) | 142, 1912, 2083, 2699, 2918 |
| Sfr274I | CTCGAG | 1 cut(s) | 1519 |
| Sfr303I | CCGCGG | 1 cut(s) | 1918 |
| SgrBI | CCGCGG | 1 cut(s) | 1918 |
| SinI | GGWCC | 3 cut(s) | 61, 2072, 2134 |
| SlaI | CTCGAG | 1 cut(s) | 1519 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 986, 1908, 2388, 2763 |
| SmlI | CTYRAG | 7 cut(s) | 146, 255, 1519, 1865, 1897, 2260, 2635 |
| SmoI | CTYRAG | 7 cut(s) | 146, 255, 1519, 1865, 1897, 2260, 2635 |
| SpeI | ACTAGT | 3 cut(s) | 13, 637, 925 |
| SseBI | AGGCCT | 1 cut(s) | 744 |
| SsiI | CCGC | 6 cut(s) | 1573, 1915, 1917, 2004, 2096, 2145 |
| SspI | AATATT | 4 cut(s) | 429, 760, 1997, 2335 |
| StuI | AGGCCT | 1 cut(s) | 744 |
| StyD4I | CCNGG | 1 cut(s) | 2182 |
| StyI | CCWWGG | 3 cut(s) | 51, 1812, 2590 |
| TaaI | ACNGT | 2 cut(s) | 1495, 2650 |
| TaqII | GACCGA | 3 cut(s) | 2089, 2249, 2624 |
| TatI | WGTACW | 2 cut(s) | 922, 1467 |
| TauI | GCSGC | 2 cut(s) | 1920, 2099 |
| TfiI | GAWTC | 9 cut(s) | 199, 814, 1628, 1750, 2192, 2324, 2498, 2699, 2873 |
| TscAI | CASTG | 6 cut(s) | 91, 502, 878, 2577, 2952, 3047 |
| TseFI | GTSAC | 3 cut(s) | 82, 928, 1305 |
| TseI | GCWGC | 3 cut(s) | 1076, 1701, 2443 |
| Tsp45I | GTSAC | 3 cut(s) | 82, 928, 1305 |
| TspGWI | ACGGA | 1 cut(s) | 2114 |
| TspRI | CASTG | 6 cut(s) | 91, 502, 878, 2577, 2952, 3047 |
| Tth111I | GACNNNGTC | 2 cut(s) | 59, 1353 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 226, 2183 |
| VpaK11BI | GGWCC | 3 cut(s) | 61, 2072, 2134 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 597, 2301, 2676 |
| XapI | RAATTY | 6 cut(s) | 786, 827, 1484, 2064, 2579, 2954 |
| XbaI | TCTAGA | 1 cut(s) | 1027 |
| XceI | RCATGY | 4 cut(s) | 489, 1597, 2464, 2839 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1997 |
| XhoI | CTCGAG | 1 cut(s) | 1519 |
| XmiI | GTMKAC | 2 cut(s) | 2231, 2606 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1536 |
| ZraI | GACGTC | 1 cut(s) | 2051 |
| ZrmI | AGTACT | 1 cut(s) | 924 |
| Zsp2I | ATGCAT | 1 cut(s) | 2933 |