disease resistance protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2159 |
| AatII | GACGTC | 1 cut(s) | 2390 |
| Acc36I | ACCTGC | 1 cut(s) | 611 |
| AccI | GTMKAC | 3 cut(s) | 543, 2041, 2793 |
| AciI | CCGC | 3 cut(s) | 785, 1409, 2695 |
| AclWI | GGATC | 3 cut(s) | 719, 1643, 2181 |
| AcoI | YGGCCR | 2 cut(s) | 361, 3007 |
| AcsI | RAATTY | 9 cut(s) | 273, 804, 1091, 1460, 1684, 2587, 2603, 2882, 2966 |
| AcuI | CTGAAG | 3 cut(s) | 27, 2198, 2789 |
| AcyI | GRCGYC | 1 cut(s) | 2387 |
| AdeI | CACNNNGTG | 2 cut(s) | 1884, 2933 |
| AfaI | GTAC | 5 cut(s) | 253, 307, 313, 2478, 2889 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 58, 623, 2453 |
| AflIII | ACRYGT | 1 cut(s) | 234 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 534 |
| AhlI | ACTAGT | 4 cut(s) | 308, 1721, 2036, 2479 |
| AjiI | CACGTC | 1 cut(s) | 235 |
| AjnI | CCWGG | 2 cut(s) | 2289, 3004 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1461, 1493, 2923, 2955 |
| AluBI | AGCT | 6 cut(s) | 131, 290, 689, 907, 1963, 2140 |
| AluI | AGCT | 6 cut(s) | 131, 290, 689, 907, 1963, 2140 |
| Alw21I | GWGCWC | 2 cut(s) | 27, 147 |
| Alw26I | GTCTC | 5 cut(s) | 724, 773, 1163, 1906, 2918 |
| AlwI | GGATC | 3 cut(s) | 719, 1643, 2181 |
| Ama87I | CYCGRG | 2 cut(s) | 146, 2185 |
| AoxI | GGCC | 8 cut(s) | 39, 361, 1275, 2193, 2287, 2359, 2840, 3007 |
| ApeKI | GCWGC | 1 cut(s) | 1975 |
| ApoI | RAATTY | 9 cut(s) | 273, 804, 1091, 1460, 1684, 2587, 2603, 2882, 2966 |
| AseI | ATTAAT | 1 cut(s) | 1631 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 681 |
| AspLEI | GCGC | 1 cut(s) | 2206 |
| AspS9I | GGNCC | 4 cut(s) | 1276, 2134, 2360, 2841 |
| AsuC2I | CCSGG | 2 cut(s) | 1280, 2197 |
| AsuHPI | GGTGA | 3 cut(s) | 958, 2224, 2559 |
| AsuII | TTCGAA | 1 cut(s) | 2880 |
| AvaI | CYCGRG | 2 cut(s) | 146, 2185 |
| AvaII | GGWCC | 1 cut(s) | 2134 |
| BaeGI | GKGCMC | 1 cut(s) | 1933 |
| BalI | TGGCCA | 2 cut(s) | 363, 3009 |
| BbsI | GAAGAC | 2 cut(s) | 1200, 2681 |
| Bbv12I | GWGCWC | 2 cut(s) | 27, 147 |
| BbvCI | CCTCAGC | 1 cut(s) | 1566 |
| BbvI | GCAGC | 1 cut(s) | 1987 |
| BccI | CCATC | 5 cut(s) | 220, 764, 970, 1595, 2531 |
| BciT130I | CCWGG | 2 cut(s) | 2291, 3006 |
| BciVI | GTATCC | 1 cut(s) | 226 |
| BcnI | CCSGG | 2 cut(s) | 1280, 2197 |
| BcoDI | GTCTC | 5 cut(s) | 724, 773, 1163, 1906, 2918 |
| BcuI | ACTAGT | 4 cut(s) | 308, 1721, 2036, 2479 |
| BfuAI | ACCTGC | 1 cut(s) | 611 |
| BfuI | GTATCC | 1 cut(s) | 226 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2826 |
| BisI | GCNGC | 1 cut(s) | 1976 |
| BlpI | GCTNAGC | 1 cut(s) | 2498 |
| BlsI | GCNGC | 1 cut(s) | 1977 |
| BmcAI | AGTACT | 4 cut(s) | 253, 307, 313, 2478 |
| Bme1390I | CCNGG | 4 cut(s) | 1280, 2197, 2291, 3006 |
| Bme18I | GGWCC | 1 cut(s) | 2134 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 534 |
| BmeT110I | CYCGRG | 2 cut(s) | 146, 2185 |
| BmgBI | CACGTC | 1 cut(s) | 235 |
| BmgT120I | GGNCC | 4 cut(s) | 1276, 2134, 2360, 2841 |
| BmiI | GGNNCC | 4 cut(s) | 177, 875, 1278, 1617 |
| BmrFI | CCNGG | 4 cut(s) | 1280, 2197, 2291, 3006 |
| BmsI | GCATC | 3 cut(s) | 142, 1491, 1987 |
| BpiI | GAAGAC | 2 cut(s) | 1200, 2681 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2780, 2812 |
| BpmI | CTGGAG | 1 cut(s) | 2354 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1566 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2498 |
| Bpu14I | TTCGAA | 1 cut(s) | 2880 |
| BpuEI | CTTGAG | 2 cut(s) | 1930, 2300 |
| BpuMI | CCSGG | 2 cut(s) | 1280, 2197 |
| Bsa29I | ATCGAT | 1 cut(s) | 2784 |
| BsaHI | GRCGYC | 1 cut(s) | 2387 |
| BsaI | GGTCTC | 2 cut(s) | 773, 1163 |
| BsaJI | CCNNGG | 4 cut(s) | 1278, 2016, 2068, 2356 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 58, 623, 2453 |
| Bse1I | ACTGG | 2 cut(s) | 197, 1059 |
| Bse3DI | GCAATG | 3 cut(s) | 393, 1047, 2612 |
| BseBI | CCWGG | 2 cut(s) | 2291, 3006 |
| BseCI | ATCGAT | 1 cut(s) | 2784 |
| BseDI | CCNNGG | 4 cut(s) | 1278, 2016, 2068, 2356 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 58, 623, 2453 |
| BseMI | GCAATG | 3 cut(s) | 393, 1047, 2612 |
| BseMII | CTCAG | 7 cut(s) | 566, 735, 1557, 1766, 2489, 2684, 2998 |
| BseNI | ACTGG | 2 cut(s) | 197, 1059 |
| BseSI | GKGCMC | 1 cut(s) | 1933 |
| BseXI | GCAGC | 1 cut(s) | 1987 |
| BseYI | CCCAGC | 1 cut(s) | 1926 |
| BshFI | GGCC | 8 cut(s) | 41, 363, 1277, 2195, 2289, 2361, 2842, 3009 |
| BshVI | ATCGAT | 1 cut(s) | 2784 |
| BsiHKAI | GWGCWC | 2 cut(s) | 27, 147 |
| BsiHKCI | CYCGRG | 2 cut(s) | 146, 2185 |
| BsiSI | CCGG | 2 cut(s) | 1280, 2196 |
| BslFI | GGGAC | 2 cut(s) | 640, 2452 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 58, 623, 2453 |
| BsmAI | GTCTC | 5 cut(s) | 724, 773, 1163, 1906, 2918 |
| BsmFI | GGGAC | 2 cut(s) | 640, 2452 |
| BsmI | GAATGC | 4 cut(s) | 336, 1553, 2052, 2311 |
| BsnI | GGCC | 8 cut(s) | 41, 363, 1277, 2195, 2289, 2361, 2842, 3009 |
| Bso31I | GGTCTC | 2 cut(s) | 773, 1163 |
| BsoBI | CYCGRG | 2 cut(s) | 146, 2185 |
| Bsp119I | TTCGAA | 1 cut(s) | 2880 |
| Bsp1286I | GDGCHC | 3 cut(s) | 27, 147, 1933 |
| Bsp1407I | TGTACA | 1 cut(s) | 2887 |
| Bsp143I | GATC | 5 cut(s) | 724, 738, 1648, 2002, 2173 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2498 |
| Bsp19I | CCATGG | 1 cut(s) | 2068 |
| BspACI | CCGC | 3 cut(s) | 785, 1409, 2695 |
| BspANI | GGCC | 8 cut(s) | 41, 363, 1277, 2195, 2289, 2361, 2842, 3009 |
| BspCNI | CTCAG | 7 cut(s) | 567, 734, 1558, 1767, 2490, 2683, 2997 |
| BspDI | ATCGAT | 1 cut(s) | 2784 |
| BspHI | TCATGA | 1 cut(s) | 1855 |
| BspLI | GGNNCC | 4 cut(s) | 177, 875, 1278, 1617 |
| BspMI | ACCTGC | 1 cut(s) | 611 |
| BspPI | GGATC | 3 cut(s) | 719, 1643, 2181 |
| BspT104I | TTCGAA | 1 cut(s) | 2880 |
| BspTNI | GGTCTC | 2 cut(s) | 773, 1163 |
| BsrDI | GCAATG | 3 cut(s) | 393, 1047, 2612 |
| BsrGI | TGTACA | 1 cut(s) | 2887 |
| BsrI | ACTGG | 2 cut(s) | 197, 1059 |
| BssECI | CCNNGG | 4 cut(s) | 1278, 2016, 2068, 2356 |
| BssMI | GATC | 5 cut(s) | 724, 738, 1648, 2002, 2173 |
| BssNI | GRCGYC | 1 cut(s) | 2387 |
| BssT1I | CCWWGG | 2 cut(s) | 2016, 2068 |
| Bst2UI | CCWGG | 2 cut(s) | 2291, 3006 |
| Bst4CI | ACNGT | 4 cut(s) | 36, 1254, 1882, 2357 |
| Bst6I | CTCTTC | 7 cut(s) | 155, 387, 954, 2622, 2655, 2829, 2953 |
| BstACI | GRCGYC | 1 cut(s) | 2387 |
| BstAUI | TGTACA | 1 cut(s) | 2887 |
| BstBI | TTCGAA | 1 cut(s) | 2880 |
| BstC8I | GCNNGC | 4 cut(s) | 23, 2193, 2287, 2429 |
| BstDSI | CCRYGG | 2 cut(s) | 2068, 2356 |
| BstEII | GGTNACC | 1 cut(s) | 946 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 621 |
| BstHHI | GCGC | 1 cut(s) | 2206 |
| BstKTI | GATC | 5 cut(s) | 727, 741, 1651, 2005, 2176 |
| BstMAI | GTCTC | 5 cut(s) | 724, 773, 1163, 1906, 2918 |
| BstMBI | GATC | 5 cut(s) | 724, 738, 1648, 2002, 2173 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 296, 662, 1145, 2201, 2826 |
| BstNI | CCWGG | 2 cut(s) | 2291, 3006 |
| BstNSI | RCATGY | 1 cut(s) | 2431 |
| BstPI | GGTNACC | 1 cut(s) | 946 |
| BstSCI | CCNGG | 4 cut(s) | 1278, 2195, 2289, 3004 |
| BstSLI | GKGCMC | 1 cut(s) | 1933 |
| BstV1I | GCAGC | 1 cut(s) | 1987 |
| BstV2I | GAAGAC | 2 cut(s) | 1200, 2681 |
| BstX2I | RGATCY | 3 cut(s) | 724, 1648, 2173 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 763, 884, 2144 |
| BstYI | RGATCY | 3 cut(s) | 724, 1648, 2173 |
| Bsu15I | ATCGAT | 1 cut(s) | 2784 |
| BsuI | GTATCC | 1 cut(s) | 226 |
| BsuRI | GGCC | 8 cut(s) | 41, 363, 1277, 2195, 2289, 2361, 2842, 3009 |
| BsuTUI | ATCGAT | 1 cut(s) | 2784 |
| BtgI | CCRYGG | 2 cut(s) | 2068, 2356 |
| BtgZI | GCGATG | 1 cut(s) | 2088 |
| BtrI | CACGTC | 1 cut(s) | 235 |
| BtsI | GCAGTG | 2 cut(s) | 589, 2738 |
| BtsIMutI | CAGTG | 5 cut(s) | 589, 1052, 1250, 2738, 2765 |
| BveI | ACCTGC | 1 cut(s) | 611 |
| Cac8I | GCNNGC | 4 cut(s) | 23, 2193, 2287, 2429 |
| CciI | TCATGA | 1 cut(s) | 1855 |
| CfoI | GCGC | 1 cut(s) | 2206 |
| Cfr13I | GGNCC | 4 cut(s) | 1276, 2134, 2360, 2841 |
| ClaI | ATCGAT | 1 cut(s) | 2784 |
| Csp6I | GTAC | 5 cut(s) | 252, 306, 312, 2477, 2888 |
| CviQI | GTAC | 5 cut(s) | 252, 306, 312, 2477, 2888 |
| DpnI | GATC | 5 cut(s) | 726, 740, 1650, 2004, 2175 |
| DpnII | GATC | 5 cut(s) | 724, 738, 1648, 2002, 2173 |
| DraIII | CACNNNGTG | 2 cut(s) | 1884, 2933 |
| DriI | GACNNNNNGTC | 1 cut(s) | 534 |
| EaeI | YGGCCR | 2 cut(s) | 361, 3007 |
| Eam1104I | CTCTTC | 7 cut(s) | 155, 387, 954, 2622, 2655, 2829, 2953 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 534 |
| EarI | CTCTTC | 7 cut(s) | 155, 387, 954, 2622, 2655, 2829, 2953 |
| Eco130I | CCWWGG | 2 cut(s) | 2016, 2068 |
| Eco31I | GGTCTC | 2 cut(s) | 773, 1163 |
| Eco47I | GGWCC | 1 cut(s) | 2134 |
| Eco57I | CTGAAG | 3 cut(s) | 27, 2198, 2789 |
| Eco88I | CYCGRG | 2 cut(s) | 146, 2185 |
| Eco91I | GGTNACC | 1 cut(s) | 946 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 621 |
| EcoO65I | GGTNACC | 1 cut(s) | 946 |
| EcoRI | GAATTC | 1 cut(s) | 2603 |
| EcoRII | CCWGG | 2 cut(s) | 2289, 3004 |
| EcoT14I | CCWWGG | 2 cut(s) | 2016, 2068 |
| EcoT22I | ATGCAT | 1 cut(s) | 1506 |
| ErhI | CCWWGG | 2 cut(s) | 2016, 2068 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 499, 531, 1461, 1493 |
| FaqI | GGGAC | 2 cut(s) | 640, 2452 |
| FauI | CCCGC | 2 cut(s) | 792, 2702 |
| FauNDI | CATATG | 1 cut(s) | 993 |
| FblI | GTMKAC | 3 cut(s) | 543, 2041, 2793 |
| Fnu4HI | GCNGC | 1 cut(s) | 1976 |
| Fsp4HI | GCNGC | 1 cut(s) | 1976 |
| GlaI | GCGC | 1 cut(s) | 2205 |
| GluI | GCNGC | 1 cut(s) | 1976 |
| GsaI | CCCAGC | 1 cut(s) | 1930 |
| GsuI | CTGGAG | 1 cut(s) | 2354 |
| HaeIII | GGCC | 8 cut(s) | 41, 363, 1277, 2195, 2289, 2361, 2842, 3009 |
| HapII | CCGG | 2 cut(s) | 1280, 2196 |
| HhaI | GCGC | 1 cut(s) | 2206 |
| Hin1I | GRCGYC | 1 cut(s) | 2387 |
| Hin6I | GCGC | 1 cut(s) | 2204 |
| HinP1I | GCGC | 1 cut(s) | 2204 |
| HincII | GTYRAC | 2 cut(s) | 544, 2034 |
| HindII | GTYRAC | 2 cut(s) | 544, 2034 |
| HpaI | GTTAAC | 1 cut(s) | 2034 |
| HpaII | CCGG | 2 cut(s) | 1280, 2196 |
| HphI | GGTGA | 3 cut(s) | 958, 2224, 2559 |
| Hpy166II | GTNNAC | 8 cut(s) | 403, 544, 2034, 2042, 2062, 2215, 2794, 2905 |
| Hpy188I | TCNGA | 9 cut(s) | 118, 279, 435, 724, 771, 1662, 1776, 2178, 2673 |
| Hpy8I | GTNNAC | 8 cut(s) | 403, 544, 2034, 2042, 2062, 2215, 2794, 2905 |
| Hpy99I | CGWCG | 4 cut(s) | 236, 390, 548, 2392 |
| HpyCH4III | ACNGT | 4 cut(s) | 36, 1254, 1882, 2357 |
| HpyCH4IV | ACGT | 4 cut(s) | 183, 234, 1197, 2387 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 296, 662, 1145, 2201, 2826 |
| HpySE526I | ACGT | 4 cut(s) | 183, 234, 1197, 2387 |
| Hsp92I | GRCGYC | 1 cut(s) | 2387 |
| HspAI | GCGC | 1 cut(s) | 2204 |
| KspAI | GTTAAC | 1 cut(s) | 2034 |
| Kzo9I | GATC | 5 cut(s) | 724, 738, 1648, 2002, 2173 |
| LmnI | GCTCC | 5 cut(s) | 30, 175, 873, 983, 1645 |
| Lsp1109I | GCAGC | 1 cut(s) | 1987 |
| LweI | GCATC | 3 cut(s) | 142, 1491, 1987 |
| MaeII | ACGT | 4 cut(s) | 183, 234, 1197, 2387 |
| MaeIII | GTNAC | 7 cut(s) | 73, 389, 946, 1254, 1365, 1438, 1781 |
| MalI | GATC | 5 cut(s) | 726, 740, 1650, 2004, 2175 |
| MboI | GATC | 5 cut(s) | 724, 738, 1648, 2002, 2173 |
| MfeI | CAATTG | 1 cut(s) | 1386 |
| MflI | RGATCY | 3 cut(s) | 724, 1648, 2173 |
| MhlI | GDGCHC | 3 cut(s) | 27, 147, 1933 |
| MlsI | TGGCCA | 2 cut(s) | 363, 3009 |
| MluNI | TGGCCA | 2 cut(s) | 363, 3009 |
| MlyI | GAGTC | 9 cut(s) | 549, 836, 1085, 1687, 1786, 1908, 2177, 2474, 2603 |
| MmeI | TCCRAC | 3 cut(s) | 219, 1270, 1792 |
| Mox20I | TGGCCA | 2 cut(s) | 363, 3009 |
| Mph1103I | ATGCAT | 1 cut(s) | 1506 |
| MroXI | GAANNNNTTC | 1 cut(s) | 681 |
| MscI | TGGCCA | 2 cut(s) | 363, 3009 |
| MslI | CAYNNNNRTG | 7 cut(s) | 20, 398, 761, 792, 1983, 2067, 2073 |
| Msp20I | TGGCCA | 2 cut(s) | 363, 3009 |
| MspI | CCGG | 2 cut(s) | 1280, 2196 |
| MspR9I | CCNGG | 4 cut(s) | 1280, 2197, 2291, 3006 |
| MunI | CAATTG | 1 cut(s) | 1386 |
| Mva1269I | GAATGC | 4 cut(s) | 336, 1553, 2052, 2311 |
| MvaI | CCWGG | 2 cut(s) | 2291, 3006 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 296, 662, 1145, 2201, 2826 |
| NciI | CCSGG | 2 cut(s) | 1280, 2197 |
| NcoI | CCATGG | 1 cut(s) | 2068 |
| NdeI | CATATG | 1 cut(s) | 993 |
| NdeII | GATC | 5 cut(s) | 724, 738, 1648, 2002, 2173 |
| NlaIV | GGNNCC | 4 cut(s) | 177, 875, 1278, 1617 |
| NmuCI | GTSAC | 4 cut(s) | 73, 389, 946, 1365 |
| NsiI | ATGCAT | 1 cut(s) | 1506 |
| NspI | RCATGY | 1 cut(s) | 2431 |
| NspV | TTCGAA | 1 cut(s) | 2880 |
| PaeI | GCATGC | 1 cut(s) | 2431 |
| PaeR7I | CTCGAG | 2 cut(s) | 146, 2185 |
| PagI | TCATGA | 1 cut(s) | 1855 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 228, 240 |
| PctI | GAATGC | 4 cut(s) | 336, 1553, 2052, 2311 |
| PdmI | GAANNNNTTC | 1 cut(s) | 681 |
| PfeI | GAWTC | 5 cut(s) | 1709, 1771, 2272, 2333, 2666 |
| PkrI | GCNGC | 1 cut(s) | 1977 |
| PleI | GAGTC | 9 cut(s) | 548, 835, 1084, 1687, 1785, 1908, 2177, 2473, 2603 |
| PpsI | GAGTC | 9 cut(s) | 548, 835, 1084, 1687, 1785, 1908, 2177, 2473, 2603 |
| PshBI | ATTAAT | 1 cut(s) | 1631 |
| PsiI | TTATAA | 1 cut(s) | 2159 |
| Psp6I | CCWGG | 2 cut(s) | 2289, 3004 |
| PspEI | GGTNACC | 1 cut(s) | 946 |
| PspFI | CCCAGC | 1 cut(s) | 1926 |
| PspGI | CCWGG | 2 cut(s) | 2289, 3004 |
| PspN4I | GGNNCC | 4 cut(s) | 177, 875, 1278, 1617 |
| PspPI | GGNCC | 4 cut(s) | 1276, 2134, 2360, 2841 |
| PspXI | VCTCGAGB | 2 cut(s) | 146, 2185 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 173, 205 |
| PsuI | RGATCY | 3 cut(s) | 724, 1648, 2173 |
| RsaI | GTAC | 5 cut(s) | 253, 307, 313, 2478, 2889 |
| RsaNI | GTAC | 5 cut(s) | 252, 306, 312, 2477, 2888 |
| RseI | CAYNNNNRTG | 7 cut(s) | 20, 398, 761, 792, 1983, 2067, 2073 |
| SalI | GTCGAC | 1 cut(s) | 542 |
| SatI | GCNGC | 1 cut(s) | 1976 |
| Sau3AI | GATC | 5 cut(s) | 724, 738, 1648, 2002, 2173 |
| Sau96I | GGNCC | 4 cut(s) | 1276, 2134, 2360, 2841 |
| ScaI | AGTACT | 4 cut(s) | 253, 307, 313, 2478 |
| SchI | GAGTC | 9 cut(s) | 549, 836, 1085, 1687, 1786, 1908, 2177, 2474, 2603 |
| ScrFI | CCNGG | 4 cut(s) | 1280, 2197, 2291, 3006 |
| SduI | GDGCHC | 3 cut(s) | 27, 147, 1933 |
| SfaNI | GCATC | 3 cut(s) | 142, 1491, 1987 |
| Sfr274I | CTCGAG | 2 cut(s) | 146, 2185 |
| SfuI | TTCGAA | 1 cut(s) | 2880 |
| SinI | GGWCC | 1 cut(s) | 2134 |
| SlaI | CTCGAG | 2 cut(s) | 146, 2185 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 20, 398, 761, 792, 1983, 2067, 2073 |
| SmlI | CTYRAG | 4 cut(s) | 146, 1909, 2185, 2279 |
| SmoI | CTYRAG | 4 cut(s) | 146, 1909, 2185, 2279 |
| SpeI | ACTAGT | 4 cut(s) | 308, 1721, 2036, 2479 |
| SphI | GCATGC | 1 cut(s) | 2431 |
| SsiI | CCGC | 3 cut(s) | 785, 1409, 2695 |
| SspI | AATATT | 1 cut(s) | 942 |
| StyD4I | CCNGG | 4 cut(s) | 1278, 2195, 2289, 3004 |
| StyI | CCWWGG | 2 cut(s) | 2016, 2068 |
| TaaI | ACNGT | 4 cut(s) | 36, 1254, 1882, 2357 |
| TaiI | ACGT | 4 cut(s) | 186, 237, 1200, 2390 |
| TaqI | TCGA | 8 cut(s) | 147, 538, 543, 2186, 2419, 2607, 2784, 2880 |
| TatI | WGTACW | 5 cut(s) | 251, 305, 311, 2476, 2887 |
| TfiI | GAWTC | 5 cut(s) | 1709, 1771, 2272, 2333, 2666 |
| TscAI | CASTG | 5 cut(s) | 589, 1059, 1257, 2745, 2772 |
| TseFI | GTSAC | 4 cut(s) | 73, 389, 946, 1365 |
| TseI | GCWGC | 1 cut(s) | 1975 |
| Tsp45I | GTSAC | 4 cut(s) | 73, 389, 946, 1365 |
| TspDTI | ATGAA | 8 cut(s) | 690, 1488, 1560, 1880, 1973, 2070, 2132, 2729 |
| TspGWI | ACGGA | 2 cut(s) | 1705, 2913 |
| TspRI | CASTG | 5 cut(s) | 589, 1059, 1257, 2745, 2772 |
| VpaK11BI | GGWCC | 1 cut(s) | 2134 |
| VspI | ATTAAT | 1 cut(s) | 1631 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 621 |
| XapI | RAATTY | 9 cut(s) | 273, 804, 1091, 1460, 1684, 2587, 2603, 2882, 2966 |
| XceI | RCATGY | 1 cut(s) | 2431 |
| XhoI | CTCGAG | 2 cut(s) | 146, 2185 |
| XmiI | GTMKAC | 3 cut(s) | 543, 2041, 2793 |
| XmnI | GAANNNNTTC | 1 cut(s) | 681 |
| ZraI | GACGTC | 1 cut(s) | 2388 |
| ZrmI | AGTACT | 4 cut(s) | 253, 307, 313, 2478 |
| Zsp2I | ATGCAT | 1 cut(s) | 1506 |