FvH4_6g01191

disease resistance protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
648144 .. 650936
2793 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g01191.t1

Sequence Viewer

Length: 2793 bp
ATGTCTGAAGCACTTGTTTCCTTCCTTGTAGAGCAGTTGGGTTCCATCTTTCTCCAACAGGTGGAACAAAACGTGAGACTTGTTGTGAATGTCAAAAAAGAAGTACTAAATCTTACCCTCAACCTCGAGACTATTCAAGATGTGCTCGCCGATGCAGAGAGGAGGCAAGTGAAGGAGGCCAACGTCAGACGCTGGCTCAACAATCTCAAAGAAGTGTCGTTCGAGATAGACGATGTGGTGGACGAGTGGAGCACTGAAATCCTGAAACAACAAATCGAGAAACAAGGTGAAAATGCTGTTGTTCCCAAGAAGAAGGTGTGTTTCTCTATTCCCTTCCGTTGTTTTTGCAATGGCCAAGTCCATCAGATCATTTTTCGTCGTGATATTGCTGTGAGGATAAAAGAGCTGAATGAGAAGTTAGCTTTGATTCACGAACAACGAAAATTTTACAATTTCCATCGCAATGAAACAGAAATTGAGCAACCTGCTCGATTGAAAAGTTTTTCTATTGTCGATAAATCTGGGACATTTGGTAGGGACTATGAAAGGAATAAACTAGTGAGCCAGTTGGTGAGTGAGAATAGTGAAGGAAGGAAGAAGCCTCTGGTCATATCTATTGTTGGTTTAGGGGGGATAGGAAAAACCACTCTTGCCCAACTAGCCTATAATGATGACAAGGTAAAGGGTTGTTTTCAAAAAAGAATATGGGTCTGTGTCTCAGAACCCCTTGTACAAATTGCGGTTGCAAAAGCCATCCTTGAGGGTCTTGATGAAAGTGTCCCGAACTCAAATGAGTTAGAAACATATGTTCAACGTATATCTAACTCTATTGAGGGCAGGAAGTTCCTTCTCGTCCTAGACGACGTTTGGGACTCAGATCATAGAAAGTGGGAGCCCTTCTTGACAACATTACTCTGTGGTGCCTCAGGGAGTAGGATTTTAGTTACAACGCGTATAGCGCAAGTTGCTAGTGCAATGGGAACGACTAGCGGTAACACTATCCATTTACAGGAGTTGAGTGAAGAAACTTGTCGGTCATTGTTCTATCATATTGCATTTTTTGATGGTGCAAGAAAAGAGTCTGAAAAGTTTGAAGATATTGGTAATAAAATTGTAAAGAGGTGCAAAGGCTTGCCTCTTGCTGCAAAGACTTTGGGTAGTCTAATGCGGTATAAGAATACAATAGAGCAATGGGTAGATGTTTTGAATAGTAAGATCTGGGAATTACAAGAGTTTGAGCAGCAGGTTTTCCAACCTTTACTACTAAGTTACTATGATTTAGAATCATTGTCCAAACGTTGTGTCTTGTATTGTGCCACGTTTCCTAAAGATTATGAAATTGATAAAGATGAGTTGATTGAGTTGTGGATATCACAAGATTATCTTGAAGTCAAAGGAGGAAACAAAGAGAGAAAAATAGTCGGTCAAAGGTGTTTTGAAAACTTAGTAATGCTGTCTTTCTTTCAAGATTTCAAGGAAGATGTGCTGGGAAATATTACTAGATGTAAGATGCACGATATTGTGCATGACTTTGTGCAATACCTGACCAAGGATGAGTGCTTTAGTATGGTGGTTAAGGGTGCTAATGAGAGAATGGAGTTACCGGGTGATGAGGTCCGTCATTTATCTTTGATGTTTGCACCAGAGGGTCCTTTTCCGGTTTCTTTTCTCAACTGTAAGAGTCTTCGCACTCTCACATGTTTTGAATCGAAACTTACTAGCATCGGGGTAGAGTTGATTTCGCAATTAAAAAGTCTTAGGAGTTTGAATTTGAGTGAGAACTCGATTTTAGAAGTTCCAAAGGAGATTGGTGGATTGATTCATCTGAGATATCTGGACTTGTCGTGGAACTCTGAATTGAAGGAATTGCCTGACAGTTTATGTGATCTATACAATCTGCAAACCTTGCGACTTGTATTCTGCGGTGAACTTGTCAAATTACCAGATGAAGAGGCGATGAGGAAGCTGACCAAGCTAAAGCATCTTTATGTCTGGAGGTGCTGTCGTCTAAAATCAAAAGGGATAAGGGGGTTAACCGGTTTGCAGAAGCTGGATGCGTTTCATATAAATGGTTATAAAGGTGCCGACAATGAAGGGACGTCGAAGTTGGAAGATTTAAAAGACTTGCACCAACTTGAAGGGAGTCTCTACATTTCACACTTGCAGTCGGTGGAAGATGCGAGCGAGGCTGTAGCGGCATGTTTGGGTGAGAAACGTCTTTTTGACCTGGTACTAGATTTTGCATGTGTCCAGTGTCGTGGGCGAGAAGGTGGGGGCCACATAGATATGGAAATACTGAATGGGTTGCAACCACATAGAGATTTGGAATCGTTGAGTATCTGGAGGTGTGAGGCCAGCATTCTCTTGCCTAATTGGATCTTGTCCTTACATAAGTTGAAAACGCTTCGTCTCGGTGTATTCGGTAACTGTGAGCTGCTTTCGGGTCCATTGGGCAAACTGCCGTCGCTTGAGTCTCTCGTATTTTCTGGGATCAACAAAGTGAAAAAGGTGGGAGTCGAGTTGTTGTTGGGAGTTGATGATGATGGCTCCTCGTCTTTATTCCCCAAATTGAAAACCCTCGAGTTCGGTGCTATGGAAGAGTGGGAAGAGTGGGAAGGGGATTTTCAGAATAATAATATTATAATAATGCCCTGCCTGTCTTCGTTAGAAATTCATCGTTGCCCGAAACTTGGTACGCTGCCCGACTTCCTGCGCAACACACCACTACAGACTGTGGACATCTCCGGTTCAGAGATTCTCAGTGATATTCTCCGGGACAAAACAAGTGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

931

Amino Acids

105.83

Weight (kDa)

5.67

Isoelectric Point (pI)

42.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 95 3.9e-21 Rx N-terminal domain
NB-ARC PF00931 183 - 353 1.6e-32 NB-ARC domain
WHD_DRP PF23559 441 - 512 1.2e-21 Disease resistance protein Winged helix domain
LRR_14 PF23598 546 - 638 1.7e-10 Leucine-rich repeat region
LRR_8 PF13855 561 - 617 3.9e-08 Leucine rich repeat
LRR_14 PF23598 562 - 892 1.1e-28 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 703 - 829 3.3e-22 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 2076, 2642
AatII GACGTC 1 cut(s) 2102
Acc16I TGCGCA 1 cut(s) 2714
Acc36I ACCTGC 2 cut(s) 493, 1234
AccB1I GGYRCC 2 cut(s) 920, 2081
AccB7I CCANNNNNTGG 1 cut(s) 61
AccII CGCG 1 cut(s) 952
AciI CCGC 5 cut(s) 740, 990, 1168, 1923, 2195
AclI AACGTT 1 cut(s) 1297
AclWI GGATC 2 cut(s) 2384, 2498
AcoI YGGCCR 1 cut(s) 352
AcsI RAATTY 3 cut(s) 443, 1768, 2670
AcuI CTGAAG 1 cut(s) 27
AcyI GRCGYC 1 cut(s) 2099
AfaI GTAC 4 cut(s) 105, 732, 2232, 2695
AfiI CCNNNNNNNGG 4 cut(s) 61, 1009, 1549, 2690
AflIII ACRYGT 2 cut(s) 950, 1697
AgeI ACCGGT 1 cut(s) 2036
AhlI ACTAGT 1 cut(s) 556
AjnI CCWGG 1 cut(s) 2226
AluBI AGCT 6 cut(s) 406, 422, 1966, 1975, 2050, 2434
AluI AGCT 6 cut(s) 406, 422, 1966, 1975, 2050, 2434
Alw21I GWGCWC 2 cut(s) 147, 254
Alw26I GTCTC 6 cut(s) 70, 122, 721, 2150, 2414, 2478
AlwI GGATC 2 cut(s) 2384, 2498
AlwNI CAGNNNCTG 2 cut(s) 192, 2050
Ama87I CYCGRG 2 cut(s) 125, 2579
AoxI GGCC 4 cut(s) 177, 352, 2275, 2352
ApeKI GCWGC 4 cut(s) 1142, 1240, 2434, 2698
ApoI RAATTY 3 cut(s) 443, 1768, 2670
ArsI GACNNNNNNTTYG 2 cut(s) 1287, 1319
AsiGI ACCGGT 1 cut(s) 2036
AspLEI GCGC 2 cut(s) 961, 2715
AspS9I GGNCC 4 cut(s) 1615, 1649, 2275, 2444
AsuC2I CCSGG 2 cut(s) 1605, 2774
AsuHPI GGTGA 5 cut(s) 299, 583, 1619, 1937, 2219
AvaI CYCGRG 2 cut(s) 125, 2579
AvaII GGWCC 3 cut(s) 1615, 1649, 2444
AxyI CCTNAGG 1 cut(s) 925
BalI TGGCCA 1 cut(s) 354
BanI GGYRCC 2 cut(s) 920, 2081
BanII GRGCYC 1 cut(s) 897
BbsI GAAGAC 2 cut(s) 1676, 2652
Bbv12I GWGCWC 2 cut(s) 147, 254
BbvI GCAGC 4 cut(s) 1129, 1252, 2421, 2685
BccI CCATC 6 cut(s) 53, 369, 465, 761, 1058, 2537
BceAI ACGGC 1 cut(s) 2446
BcgI CGANNNNNNTGC 4 cut(s) 470, 504, 2570, 2604
BciT130I CCWGG 1 cut(s) 2228
BcnI CCSGG 2 cut(s) 1605, 2774
BcoDI GTCTC 6 cut(s) 70, 122, 721, 2150, 2414, 2478
BcuI ACTAGT 1 cut(s) 556
BfaI CTAG 8 cut(s) 557, 659, 857, 969, 987, 1500, 1719, 2234
BfmI CTRYAG 2 cut(s) 2190, 2726
BfuAI ACCTGC 2 cut(s) 493, 1234
BglII AGATCT 1 cut(s) 1215
BisI GCNGC 5 cut(s) 1143, 1241, 2196, 2435, 2699
BlsI GCNGC 5 cut(s) 1144, 1242, 2197, 2436, 2700
BmcAI AGTACT 1 cut(s) 105
Bme1390I CCNGG 3 cut(s) 1605, 2228, 2774
Bme18I GGWCC 3 cut(s) 1615, 1649, 2444
BmeT110I CYCGRG 2 cut(s) 125, 2579
BmgT120I GGNCC 4 cut(s) 1615, 1649, 2275, 2444
BmiI GGNNCC 8 cut(s) 43, 894, 922, 1650, 2083, 2276, 2445, 2548
BmrFI CCNGG 3 cut(s) 1605, 2228, 2774
BmsI GCATC 6 cut(s) 142, 1500, 1731, 1990, 2044, 2167
BpiI GAAGAC 2 cut(s) 1676, 2652
BpmI CTGGAG 2 cut(s) 2014, 2362
BpuEI CTTGAG 2 cut(s) 779, 2489
BpuMI CCSGG 2 cut(s) 1605, 2774
BsaHI GRCGYC 1 cut(s) 2099
BsaJI CCNNGG 1 cut(s) 1548
BsaWI WCCGGW 3 cut(s) 1657, 2036, 2744
BsaXI ACNNNNNCTCC 2 cut(s) 1987, 2017
Bsc4I CCNNNNNNNGG 4 cut(s) 61, 1009, 1549, 2690
Bse118I RCCGGY 1 cut(s) 2036
Bse1I ACTGG 2 cut(s) 565, 2251
Bse21I CCTNAGG 1 cut(s) 925
Bse3DI GCAATG 4 cut(s) 355, 469, 981, 1196
BseBI CCWGG 1 cut(s) 2228
BseDI CCNNGG 1 cut(s) 1548
BseGI GGATG 3 cut(s) 753, 1558, 2059
BseLI CCNNNNNNNGG 4 cut(s) 61, 1009, 1549, 2690
BseMI GCAATG 4 cut(s) 355, 469, 981, 1196
BseMII CTCAG 5 cut(s) 732, 888, 939, 1817, 2773
BseNI ACTGG 2 cut(s) 565, 2251
BseRI GAGGAG 2 cut(s) 175, 2539
BseXI GCAGC 4 cut(s) 1129, 1252, 2421, 2685
BseYI CCCAGC 1 cut(s) 1486
Bsh1236I CGCG 1 cut(s) 952
BshFI GGCC 4 cut(s) 179, 354, 2277, 2354
BshNI GGYRCC 2 cut(s) 920, 2081
BshTI ACCGGT 1 cut(s) 2036
BsiHKAI GWGCWC 2 cut(s) 147, 254
BsiHKCI CYCGRG 2 cut(s) 125, 2579
BsiSI CCGG 5 cut(s) 1604, 1658, 2037, 2745, 2773
BslFI GGGAC 6 cut(s) 538, 551, 764, 884, 2110, 2789
BslI CCNNNNNNNGG 4 cut(s) 61, 1009, 1549, 2690
BsmAI GTCTC 6 cut(s) 70, 122, 721, 2150, 2414, 2478
BsmBI CGTCTC 1 cut(s) 2414
BsmFI GGGAC 6 cut(s) 538, 551, 764, 884, 2110, 2789
BsmI GAATGC 1 cut(s) 2358
BsnI GGCC 4 cut(s) 179, 354, 2277, 2354
BsoBI CYCGRG 2 cut(s) 125, 2579
Bsp1286I GDGCHC 3 cut(s) 147, 254, 897
Bsp1407I TGTACA 1 cut(s) 730
Bsp143I GATC 6 cut(s) 366, 877, 1215, 1885, 2376, 2490
BspACI CCGC 5 cut(s) 740, 990, 1168, 1923, 2195
BspANI GGCC 4 cut(s) 179, 354, 2277, 2354
BspCNI CTCAG 5 cut(s) 731, 887, 938, 1818, 2772
BspFNI CGCG 1 cut(s) 952
BspLI GGNNCC 8 cut(s) 43, 894, 922, 1650, 2083, 2276, 2445, 2548
BspMI ACCTGC 2 cut(s) 493, 1234
BspPI GGATC 2 cut(s) 2384, 2498
BspT107I GGYRCC 2 cut(s) 920, 2081
BsrDI GCAATG 4 cut(s) 355, 469, 981, 1196
BsrFI RCCGGY 1 cut(s) 2036
BsrGI TGTACA 1 cut(s) 730
BsrI ACTGG 2 cut(s) 565, 2251
BssAI RCCGGY 1 cut(s) 2036
BssECI CCNNGG 1 cut(s) 1548
BssMI GATC 6 cut(s) 366, 877, 1215, 1885, 2376, 2490
BssNI GRCGYC 1 cut(s) 2099
BssT1I CCWWGG 1 cut(s) 1548
Bst2UI CCWGG 1 cut(s) 2228
Bst4CI ACNGT 4 cut(s) 1676, 1877, 2429, 2734
Bst6I CTCTTC 3 cut(s) 1944, 2592, 2601
BstACI GRCGYC 1 cut(s) 2099
BstAPI GCANNNNNTGC 1 cut(s) 1906
BstAUI TGTACA 1 cut(s) 730
BstC8I GCNNGC 5 cut(s) 147, 194, 1133, 2182, 2356
BstDEI CTNAG 8 cut(s) 718, 874, 925, 1265, 1444, 1757, 1826, 2759
BstENI CCTNNNNNAGG 1 cut(s) 1547
BstF5I GGATG 3 cut(s) 753, 1558, 2059
BstFNI CGCG 1 cut(s) 952
BstHHI GCGC 2 cut(s) 961, 2715
BstKTI GATC 6 cut(s) 369, 880, 1218, 1888, 2379, 2493
BstMAI GTCTC 6 cut(s) 70, 122, 721, 2150, 2414, 2478
BstMBI GATC 6 cut(s) 366, 877, 1215, 1885, 2376, 2490
BstMWI GCNNNNNNNGC 7 cut(s) 659, 958, 965, 1906, 1972, 2186, 2195
BstNI CCWGG 1 cut(s) 2228
BstNSI RCATGY 3 cut(s) 1701, 2202, 2247
BstSCI CCNGG 3 cut(s) 1603, 2226, 2772
BstSFI CTRYAG 2 cut(s) 2190, 2726
BstUI CGCG 1 cut(s) 952
BstV1I GCAGC 4 cut(s) 1129, 1252, 2421, 2685
BstV2I GAAGAC 2 cut(s) 1676, 2652
BstX2I RGATCY 2 cut(s) 1215, 2376
BstXI CCANNNNNNTGG 1 cut(s) 2258
BstYI RGATCY 2 cut(s) 1215, 2376
Bsu36I CCTNAGG 1 cut(s) 925
BsuRI GGCC 4 cut(s) 179, 354, 2277, 2354
BtgZI GCGATG 2 cut(s) 443, 1970
BtsCI GGATG 3 cut(s) 753, 1558, 2059
BtsIMutI CAGTG 3 cut(s) 252, 2258, 2767
BveI ACCTGC 2 cut(s) 493, 1234
Cac8I GCNNGC 5 cut(s) 147, 194, 1133, 2182, 2356
CaiI CAGNNNCTG 2 cut(s) 192, 2050
CfoI GCGC 2 cut(s) 961, 2715
Cfr10I RCCGGY 1 cut(s) 2036
Cfr13I GGNCC 4 cut(s) 1615, 1649, 2275, 2444
CseI GACGC 1 cut(s) 198
CsiI ACCWGGT 1 cut(s) 2226
Csp6I GTAC 4 cut(s) 104, 731, 2231, 2694
CspAI ACCGGT 1 cut(s) 2036
CviAII CATG 4 cut(s) 1526, 1698, 2199, 2244
CviQI GTAC 4 cut(s) 104, 731, 2231, 2694
DdeI CTNAG 8 cut(s) 718, 874, 925, 1265, 1444, 1757, 1826, 2759
DpnI GATC 6 cut(s) 368, 879, 1217, 1887, 2378, 2492
DpnII GATC 6 cut(s) 366, 877, 1215, 1885, 2376, 2490
DraI TTTAAA 1 cut(s) 2118
EaeI YGGCCR 1 cut(s) 352
Eam1104I CTCTTC 3 cut(s) 1944, 2592, 2601
EarI CTCTTC 3 cut(s) 1944, 2592, 2601
Eco130I CCWWGG 1 cut(s) 1548
Eco24I GRGCYC 1 cut(s) 897
Eco32I GATATC 2 cut(s) 1371, 1832
Eco47I GGWCC 3 cut(s) 1615, 1649, 2444
Eco57I CTGAAG 1 cut(s) 27
Eco81I CCTNAGG 1 cut(s) 925
Eco88I CYCGRG 2 cut(s) 125, 2579
EcoNI CCTNNNNNAGG 1 cut(s) 1547
EcoO109I RGGNCCY 1 cut(s) 1649
EcoRII CCWGG 1 cut(s) 2226
EcoRV GATATC 2 cut(s) 1371, 1832
EcoT14I CCWWGG 1 cut(s) 1548
EcoT38I GRGCYC 1 cut(s) 897
ErhI CCWWGG 1 cut(s) 1548
Esp3I CGTCTC 1 cut(s) 2414
FaeI CATG 4 cut(s) 1529, 1701, 2202, 2247
FalI AAGNNNNNCTT 4 cut(s) 741, 773, 1368, 1400
FaqI GGGAC 6 cut(s) 538, 551, 764, 884, 2110, 2789
FatI CATG 4 cut(s) 1525, 1697, 2198, 2243
FauNDI CATATG 1 cut(s) 805
Fnu4HI GCNGC 5 cut(s) 1143, 1241, 2196, 2435, 2699
FokI GGATG 3 cut(s) 740, 1565, 2066
FriOI GRGCYC 1 cut(s) 897
Fsp4HI GCNGC 5 cut(s) 1143, 1241, 2196, 2435, 2699
FspBI CTAG 8 cut(s) 557, 659, 857, 969, 987, 1500, 1719, 2234
FspI TGCGCA 1 cut(s) 2714
GlaI GCGC 2 cut(s) 960, 2714
GluI GCNGC 5 cut(s) 1143, 1241, 2196, 2435, 2699
GsaI CCCAGC 1 cut(s) 1490
GsuI CTGGAG 2 cut(s) 2014, 2362
HaeIII GGCC 4 cut(s) 179, 354, 2277, 2354
HapII CCGG 5 cut(s) 1604, 1658, 2037, 2745, 2773
HgaI GACGC 1 cut(s) 198
HhaI GCGC 2 cut(s) 961, 2715
Hin1I GRCGYC 1 cut(s) 2099
Hin1II CATG 4 cut(s) 1529, 1701, 2202, 2247
Hin6I GCGC 2 cut(s) 959, 2713
HinP1I GCGC 2 cut(s) 959, 2713
HincII GTYRAC 1 cut(s) 2034
HindII GTYRAC 1 cut(s) 2034
HpaI GTTAAC 1 cut(s) 2034
HpaII CCGG 5 cut(s) 1604, 1658, 2037, 2745, 2773
HphI GGTGA 5 cut(s) 299, 583, 1619, 1937, 2219
Hpy166II GTNNAC 4 cut(s) 241, 1928, 2034, 2737
Hpy8I GTNNAC 4 cut(s) 241, 1928, 2034, 2737
Hpy99I CGWCG 4 cut(s) 381, 866, 2104, 2467
HpyCH4III ACNGT 4 cut(s) 1676, 1877, 2429, 2734
HpyCH4IV ACGT 8 cut(s) 72, 183, 814, 864, 1297, 1319, 2099, 2215
HpyF10VI GCNNNNNNNGC 7 cut(s) 659, 958, 965, 1906, 1972, 2186, 2195
HpyF3I CTNAG 8 cut(s) 718, 874, 925, 1265, 1444, 1757, 1826, 2759
HpySE526I ACGT 8 cut(s) 72, 183, 814, 864, 1297, 1319, 2099, 2215
Hsp92I GRCGYC 1 cut(s) 2099
Hsp92II CATG 4 cut(s) 1529, 1701, 2202, 2247
HspAI GCGC 2 cut(s) 959, 2713
KspAI GTTAAC 1 cut(s) 2034
Kzo9I GATC 6 cut(s) 366, 877, 1215, 1885, 2376, 2490
LmnI GCTCC 3 cut(s) 249, 892, 2552
Lsp1109I GCAGC 4 cut(s) 1129, 1252, 2421, 2685
LweI GCATC 6 cut(s) 142, 1500, 1731, 1990, 2044, 2167
MabI ACCWGGT 1 cut(s) 2226
MaeI CTAG 8 cut(s) 557, 659, 857, 969, 987, 1500, 1719, 2234
MaeII ACGT 8 cut(s) 72, 183, 814, 864, 1297, 1319, 2099, 2215
MaeIII GTNAC 5 cut(s) 943, 992, 1268, 1599, 2423
MalI GATC 6 cut(s) 368, 879, 1217, 1887, 2378, 2492
MboI GATC 6 cut(s) 366, 877, 1215, 1885, 2376, 2490
MflI RGATCY 2 cut(s) 1215, 2376
MhlI GDGCHC 3 cut(s) 147, 254, 897
MlsI TGGCCA 1 cut(s) 354
MluI ACGCGT 1 cut(s) 950
MluNI TGGCCA 1 cut(s) 354
MlyI GAGTC 6 cut(s) 866, 1088, 1690, 2152, 2480, 2523
MmeI TCCRAC 3 cut(s) 79, 1276, 2088
Mox20I TGGCCA 1 cut(s) 354
MscI TGGCCA 1 cut(s) 354
MseI TTAA 4 cut(s) 1575, 1748, 2033, 2117
MslI CAYNNNNRTG 4 cut(s) 462, 1986, 2067, 2285
Msp20I TGGCCA 1 cut(s) 354
MspI CCGG 5 cut(s) 1604, 1658, 2037, 2745, 2773
MspR9I CCNGG 3 cut(s) 1605, 2228, 2774
Mva1269I GAATGC 1 cut(s) 2358
MvaI CCWGG 1 cut(s) 2228
MvnI CGCG 1 cut(s) 952
MwoI GCNNNNNNNGC 7 cut(s) 659, 958, 965, 1906, 1972, 2186, 2195
NciI CCSGG 2 cut(s) 1605, 2774
NdeI CATATG 1 cut(s) 805
NdeII GATC 6 cut(s) 366, 877, 1215, 1885, 2376, 2490
NlaIII CATG 4 cut(s) 1529, 1701, 2202, 2247
NlaIV GGNNCC 8 cut(s) 43, 894, 922, 1650, 2083, 2276, 2445, 2548
NsbI TGCGCA 1 cut(s) 2714
NspI RCATGY 3 cut(s) 1701, 2202, 2247
PaeR7I CTCGAG 2 cut(s) 125, 2579
PciI ACATGT 1 cut(s) 1697
PcsI WCGNNNNNNNCGW 2 cut(s) 228, 858
PctI GAATGC 1 cut(s) 2358
PfeI GAWTC 6 cut(s) 427, 1283, 1706, 1819, 2327, 2755
PflMI CCANNNNNTGG 1 cut(s) 61
PfoI TCCNGGA 1 cut(s) 2772
PinAI ACCGGT 1 cut(s) 2036
PkrI GCNGC 5 cut(s) 1144, 1242, 2197, 2436, 2700
PleI GAGTC 6 cut(s) 866, 1087, 1689, 2151, 2479, 2522
PpsI GAGTC 6 cut(s) 866, 1087, 1689, 2151, 2479, 2522
PpuMI RGGWCCY 1 cut(s) 1649
PscI ACATGT 1 cut(s) 1697
PsiI TTATAA 2 cut(s) 2076, 2642
Psp1406I AACGTT 1 cut(s) 1297
Psp5II RGGWCCY 1 cut(s) 1649
Psp6I CCWGG 1 cut(s) 2226
PspFI CCCAGC 1 cut(s) 1486
PspGI CCWGG 1 cut(s) 2226
PspN4I GGNNCC 8 cut(s) 43, 894, 922, 1650, 2083, 2276, 2445, 2548
PspPI GGNCC 4 cut(s) 1615, 1649, 2275, 2444
PspPPI RGGWCCY 1 cut(s) 1649
PspXI VCTCGAGB 1 cut(s) 2579
PsrI GAACNNNNNNTAC 2 cut(s) 714, 746
PstNI CAGNNNCTG 2 cut(s) 192, 2050
PsuI RGATCY 2 cut(s) 1215, 2376
RsaI GTAC 4 cut(s) 105, 732, 2232, 2695
RsaNI GTAC 4 cut(s) 104, 731, 2231, 2694
RseI CAYNNNNRTG 4 cut(s) 462, 1986, 2067, 2285
SaqAI TTAA 4 cut(s) 1575, 1748, 2033, 2117
SatI GCNGC 5 cut(s) 1143, 1241, 2196, 2435, 2699
Sau3AI GATC 6 cut(s) 366, 877, 1215, 1885, 2376, 2490
Sau96I GGNCC 4 cut(s) 1615, 1649, 2275, 2444
ScaI AGTACT 1 cut(s) 105
SchI GAGTC 6 cut(s) 866, 1088, 1690, 2152, 2480, 2523
ScrFI CCNGG 3 cut(s) 1605, 2228, 2774
SduI GDGCHC 3 cut(s) 147, 254, 897
SexAI ACCWGGT 1 cut(s) 2226
SfaNI GCATC 6 cut(s) 142, 1500, 1731, 1990, 2044, 2167
SfcI CTRYAG 2 cut(s) 2190, 2726
Sfr274I CTCGAG 2 cut(s) 125, 2579
SinI GGWCC 3 cut(s) 1615, 1649, 2444
SlaI CTCGAG 2 cut(s) 125, 2579
SmiMI CAYNNNNRTG 4 cut(s) 462, 1986, 2067, 2285
SmlI CTYRAG 4 cut(s) 125, 758, 2468, 2579
SmoI CTYRAG 4 cut(s) 125, 758, 2468, 2579
SpeI ACTAGT 1 cut(s) 556
SsiI CCGC 5 cut(s) 740, 990, 1168, 1923, 2195
SspI AATATT 2 cut(s) 1495, 2638
SspMI CTAG 8 cut(s) 557, 659, 857, 969, 987, 1500, 1719, 2234
StyD4I CCNGG 3 cut(s) 1603, 2226, 2772
StyI CCWWGG 1 cut(s) 1548
TaaI ACNGT 4 cut(s) 1676, 1877, 2429, 2734
TaiI ACGT 8 cut(s) 75, 186, 817, 867, 1300, 1322, 2102, 2218
TaqII GACCGA 2 cut(s) 1023, 1412
TatI WGTACW 2 cut(s) 103, 730
TauI GCSGC 1 cut(s) 2198
TfiI GAWTC 6 cut(s) 427, 1283, 1706, 1819, 2327, 2755
Tru1I TTAA 4 cut(s) 1575, 1748, 2033, 2117
Tru9I TTAA 4 cut(s) 1575, 1748, 2033, 2117
TscAI CASTG 3 cut(s) 259, 2258, 2767
TseI GCWGC 4 cut(s) 1142, 1240, 2434, 2698
TspDTI ATGAA 9 cut(s) 480, 558, 786, 1350, 1811, 1962, 2051, 2106, 2663
TspGWI ACGGA 2 cut(s) 326, 1607
TspRI CASTG 3 cut(s) 259, 2258, 2767
Van91I CCANNNNNTGG 1 cut(s) 61
VpaK11BI GGWCC 3 cut(s) 1615, 1649, 2444
XagI CCTNNNNNAGG 1 cut(s) 1547
XapI RAATTY 3 cut(s) 443, 1768, 2670
XceI RCATGY 3 cut(s) 1701, 2202, 2247
XhoI CTCGAG 2 cut(s) 125, 2579
XspI CTAG 8 cut(s) 557, 659, 857, 969, 987, 1500, 1719, 2234
ZraI GACGTC 1 cut(s) 2100
ZrmI AGTACT 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.