Rw7G033950

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
50119153 .. 50122008
2856 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G033950.1

Sequence Viewer

Length: 2856 bp
ATGGCTGAGGCACTCATCTCTGTGCTTCTGGAGCAATTAGCTTCAGTAGTATATCAACACACAAATGAAGTGGTGAAACTGGTTTTGAATGCTGACAAAGATGTTAAAAGTTTCAGCAGCAAGCTCAAAGCTATCCAGGCTGTGCTTGAGGATGCCGAGAAGAAACAAGTGACAGAGGCCAGCGTGGGCGACTGGTTGCAGAAGCTCAAAGATGTGTCGTACGAGATGGACGACGTGCTAGATGAGTGGAACACTGAACTTCTCAGACAACAAGCGGAGGAGAAGCAAGAGGTGGAAGGAGATAATGCTCTTGTTACCAAGAAGAAGGTACGTTTCCCCATGTCCTCCGGTTGCTTTTGTTTTGGTCAAGTCAATAAGGTCATTCATCATCATCACATAGCTAGAAGGATAAAGGAACTGAATGAGAAGTTAACTTCGATTGCTGCTGAAAAAGCCATGTATGGCTTTCATCAATCCACAATAGGCGGCCATGATGAGCAGTTTATTCAACGACCGAAGACTACATCTTTGGTCAATAAATCTATGATATTTGGCCGAGAAGAAGAAAAAAAGAACTTGCTGAGCAAGTTGTTGAGAGAGAGTAACCAAGATGGGGGGAGGTTCCTTGTCATCCCTATTGTAGGGATGGGAGGGATGGGGAAAACAACTCTTGCCAAACTAGCCTATAATGATGAAAATGTTACAGCCCATTTTGATAAGAAAGTATGGGTTTGTGTCTCGGAACCTTTTGACGAGATTAAAATTGCCAAAGCGATCATTGAGATTCTAGATAAAAATGAAACCCAAAGAAATTCAGATGAGTTGGAAACCCTACTCTTATGTATACAGACTCATGTTGAGAATAAGAAGTTCCTCCTTGTCCTAGATGACGTGTGGACCGAAGACCGAAGACAGTGGGAAAGTTTGCAACTACCAGAAATATTGCAAAGTTGTGCTGAAGGTAGTAGAATACTGGTGACCACACGAAAAGAATGGGTTGCTAAAATGATGAGAGCAACTAGTAGCATGATCCATTTGGACAAGTTGAGCGATAGGGATTGTCTCACATTGTTCAATAGCTTTGCATTTTTGGATAGGGAAGAAGATAAGGCTAATGAGTTTGGAGCTATTGGTGAGAAAATTGTGAAAAAGTGTAAAGGTTTGCCTCTTGCTGCAAAGACTTTAGGTAGTCTAGTGTGGTATAAGAAAACAAGAAATGAATGGTGGGATGTTCTGAATAGTAAGATATGGGAACTAGAAGAAGTTGAGGAACAAGTTTTCCGACCACTATTACTAAGTTATTATGATTTGCCCCCTGTAGTCAAAATGTGTCTTTTGTATTGTGCAATATTTCCCAAAGATTATGAGTTCCAAAAAGATAATTTGATTCATCTTTGGATGTCACAAAATTATCTTAATTTAAAGGGAACAGGTCAACATTATTTTGAGGGTCTAGTAATGCGGTCTTTCTTTCAAGATTTAAAAAAAGATGAGAAAGGAAATGTTTATGAGTGCAAAATGCATGATATAGTGCATGACTTTGTGCGGGTTCTTACCAGAAATGAATGCACTATTATTGAAGCAGTCAAGGGTGCTAATCAAAGAATTGAGCTACCATGTGATTATAAGGTTCGTCATTTGACCTTAATAAATGTACATGAAGGTCAACTTCCTACTTCATTTGACAAGTGCAAAAATATGCGAACCCTCACACTCCTTGATTCAAGCATTACAACCATAAGCCCCGGTTCAATTATGCAAATGAAATGCCTTAGGACATTGAATTTGAGTGGTGACATGAGATTCGGTCACATGCTCAATGAACTTCCAAAAGAGATTGGTGAATTAATTCATTTGAGATATATGAATTTGTCTTGGGGTGGTAATTTGAAAGAATTACCGGATGCTGTGTGTGATTTATACAATCTACAAACTCTGGACGTTTCGTGGTGTGGTCGACTTGAGAAACTACCCAAGGCAATGGGAAAGTTGATTAACTTGAAGCATCTATATGTTGGCGGCTGTTATAAGCTGAGGTACTTACCGAAAGGGATTGGGAGTTTGAAAAGTCTGCGACTACTAGACAGGTTTAAAGCATGTGAGGGTGATGATGATGAAGCATTGAAATTAGGAGATCTCGGAATCATGGACCAGCTTCAGGGGATCCTTCGGATAGAAATATTGGGGAAAGATGATGCGAGTGAGATTAAGAAAGCACAGTTGGGGAATAAGGAGCACGTCTCTCATTTGGATGTAACTTTCCAGAGAGGAGATGAAGATGAAGAGCAGAGAAAAGGCGATGAAGAAATAGTGAAAGCATTGCAACCACATCAAAATTTGGAATCTTTAGAGATTTGGTTTTGCCAAATTGGCACCACCGAGTCTCTCGATTGGATCAAGTCTTTACGCAATTTGAGAAGACTTGTTCTCCATGACTGGAAATTTTGTGAAGTTCTGCCTCCTCTTGGAAAATTGCCATCGCTTGAAATTCTGGAGATAGGGCAGATGAAGAAAGTGAAAAAGGTGGGAGTTGAATTTCTGGGAATAGAAGAAGAAGAAGTCTCAAGAGATCTATTCCCCAAATTGAAACAACTTCGGTTCAGATCGATGGAGAACTGGGAAGAGTGGGCCTTTCTTTCTGAAATCACAACAATGCCACGCCTTTCTGAGTTGCTAATTGAGAGTTGCCCAAAGCTAAAAGCACTGCCAGAGTTCCTCTACAAGATAACAGCTCTGCGTACTTTGGAGATCGAGGATAGTCCAATTCTGGAAGGAGAATACGAAAAAGACGTGGGGAAGGAGTGGCACAACATTTCTCACATCCCAAACCTCACAATCCAATCTGGAAGGAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

951

Amino Acids

109.55

Weight (kDa)

5.92

Isoelectric Point (pI)

45.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 96 4.7e-21 Rx N-terminal domain
NB-ARC PF00931 187 - 364 1.4e-36 NB-ARC domain
WHD_DRP PF23559 450 - 515 3e-21 Disease resistance protein Winged helix domain
LRR_8 PF13855 558 - 599 5.1e-06 Leucine rich repeat
LRR_14 PF23598 611 - 894 5.3e-31 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 711 - 836 2.4e-23 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1626, 2028
AccB1I GGYRCC 1 cut(s) 2372
AccI GTMKAC 2 cut(s) 844, 1957
AciI CCGC 5 cut(s) 275, 486, 1462, 1546, 2019
AclWI GGATC 4 cut(s) 1024, 2158, 2171, 2402
AcoI YGGCCR 2 cut(s) 487, 553
AcsI RAATTY 7 cut(s) 811, 1783, 1867, 2335, 2441, 2487, 2534
AcuI CTGAAG 3 cut(s) 27, 978, 2141
AfaI GTAC 5 cut(s) 221, 330, 1656, 2039, 2740
AfiI CCNNNNNNNGG 4 cut(s) 613, 641, 2158, 2465
AflIII ACRYGT 1 cut(s) 891
AhlI ACTAGT 1 cut(s) 1019
AjiI CACGTC 4 cut(s) 235, 892, 2239, 2791
AjnI CCWGG 1 cut(s) 135
AjuI GAANNNNNNNTTGG 2 cut(s) 2204, 2236
AloI GAACNNNNNNTCC 2 cut(s) 1263, 1295
Alw21I GWGCWC 1 cut(s) 2238
Alw26I GTCTC 5 cut(s) 742, 1067, 2245, 2388, 2566
AlwI GGATC 4 cut(s) 1024, 2158, 2171, 2402
AoxI GGCC 4 cut(s) 177, 487, 553, 2628
ApeKI GCWGC 3 cut(s) 117, 443, 1172
ApoI RAATTY 7 cut(s) 811, 1783, 1867, 2335, 2441, 2487, 2534
ArsI GACNNNNNNTTYG 6 cut(s) 511, 543, 1768, 1787, 1800, 1819
AseI ATTAAT 1 cut(s) 1847
Asp700I GAANNNNTTC 1 cut(s) 1848
AspS9I GGNCC 3 cut(s) 897, 2149, 2628
AsuC2I CCSGG 1 cut(s) 1746
AsuHPI GGTGA 6 cut(s) 85, 988, 1145, 1805, 1853, 2117
AvaII GGWCC 2 cut(s) 897, 2149
AxyI CCTNAGG 1 cut(s) 1772
BamHI GGATCC 1 cut(s) 2163
BanI GGYRCC 1 cut(s) 2372
BbsI GAAGAC 4 cut(s) 524, 909, 916, 2425
Bbv12I GWGCWC 1 cut(s) 2238
BbvCI CCTCAGC 2 cut(s) 6, 2033
BbvI GCAGC 3 cut(s) 129, 430, 1159
BccI CCATC 6 cut(s) 220, 605, 640, 649, 2485, 2602
BciT130I CCWGG 1 cut(s) 137
BcnI CCSGG 1 cut(s) 1746
BcoDI GTCTC 5 cut(s) 742, 1067, 2245, 2388, 2566
BcuI ACTAGT 1 cut(s) 1019
BfmI CTRYAG 1 cut(s) 1317
BglI GCCNNNNNGGC 1 cut(s) 2370
BglII AGATCT 2 cut(s) 2134, 2569
BisI GCNGC 5 cut(s) 118, 444, 487, 1173, 2020
BlpI GCTNAGC 1 cut(s) 581
BlsI GCNGC 5 cut(s) 119, 445, 488, 1174, 2021
Bme1390I CCNGG 2 cut(s) 137, 1746
Bme18I GGWCC 2 cut(s) 897, 2149
BmgBI CACGTC 4 cut(s) 235, 892, 2239, 2791
BmgT120I GGNCC 3 cut(s) 897, 2149, 2628
BmiI GGNNCC 4 cut(s) 623, 744, 2165, 2374
BmrFI CCNGG 2 cut(s) 137, 1746
BmrI ACTGGG 1 cut(s) 2626
BmsI GCATC 4 cut(s) 142, 1894, 2014, 2185
BmuI ACTGGG 1 cut(s) 2626
BpiI GAAGAC 4 cut(s) 524, 909, 916, 2425
BplI GAGNNNNNCTC 2 cut(s) 2225, 2257
BpmI CTGGAG 2 cut(s) 50, 2513
Bpu10I CCTNAGC 2 cut(s) 6, 2033
Bpu1102I GCTNAGC 1 cut(s) 581
BpuEI CTTGAG 3 cut(s) 167, 1982, 2548
BpuMI CCSGG 1 cut(s) 1746
Bsa29I ATCGAT 1 cut(s) 2606
BsaJI CCNNGG 2 cut(s) 1744, 1974
BsaWI WCCGGW 2 cut(s) 347, 1900
BsaXI ACNNNNNCTCC 2 cut(s) 2412, 2442
Bsc4I CCNNNNNNNGG 4 cut(s) 613, 641, 2158, 2465
Bse1I ACTGG 5 cut(s) 84, 197, 978, 2441, 2621
Bse21I CCTNAGG 1 cut(s) 1772
Bse3DI GCAATG 2 cut(s) 1986, 2318
BseBI CCWGG 1 cut(s) 137
BseCI ATCGAT 1 cut(s) 2606
BseDI CCNNGG 2 cut(s) 1744, 1974
BseGI GGATG 9 cut(s) 157, 630, 651, 660, 1234, 1404, 1909, 2257, 2820
BseLI CCNNNNNNNGG 4 cut(s) 613, 641, 2158, 2465
BseMI GCAATG 2 cut(s) 1986, 2318
BseMII CTCAG 4 cut(s) 277, 572, 2024, 2658
BseNI ACTGG 5 cut(s) 84, 197, 978, 2441, 2621
BseRI GAGGAG 3 cut(s) 293, 2283, 2451
BseXI GCAGC 3 cut(s) 129, 430, 1159
Bsh1285I CGRYCG 1 cut(s) 515
BshFI GGCC 4 cut(s) 179, 489, 555, 2630
BshNI GGYRCC 1 cut(s) 2372
BshVI ATCGAT 1 cut(s) 2606
BsiEI CGRYCG 1 cut(s) 515
BsiHKAI GWGCWC 1 cut(s) 2238
BsiSI CCGG 3 cut(s) 348, 1746, 1901
BsiWI CGTACG 1 cut(s) 219
BslI CCNNNNNNNGG 4 cut(s) 613, 641, 2158, 2465
BsmAI GTCTC 5 cut(s) 742, 1067, 2245, 2388, 2566
BsmBI CGTCTC 1 cut(s) 2245
BsmI GAATGC 2 cut(s) 94, 1571
BsnI GGCC 4 cut(s) 179, 489, 555, 2630
Bsp1286I GDGCHC 1 cut(s) 2238
Bsp1407I TGTACA 1 cut(s) 1654
Bsp143I GATC 8 cut(s) 774, 1029, 2134, 2163, 2394, 2569, 2603, 2748
Bsp1720I GCTNAGC 1 cut(s) 581
BspACI CCGC 5 cut(s) 275, 486, 1462, 1546, 2019
BspANI GGCC 4 cut(s) 179, 489, 555, 2630
BspCNI CTCAG 4 cut(s) 276, 573, 2025, 2659
BspDI ATCGAT 1 cut(s) 2606
BspLI GGNNCC 4 cut(s) 623, 744, 2165, 2374
BspPI GGATC 4 cut(s) 1024, 2158, 2171, 2402
BspQI GCTCTTC 1 cut(s) 2277
BspT107I GGYRCC 1 cut(s) 2372
BsrDI GCAATG 2 cut(s) 1986, 2318
BsrGI TGTACA 1 cut(s) 1654
BsrI ACTGG 5 cut(s) 84, 197, 978, 2441, 2621
BssECI CCNNGG 2 cut(s) 1744, 1974
BssMI GATC 8 cut(s) 774, 1029, 2134, 2163, 2394, 2569, 2603, 2748
BssNAI GTATAC 1 cut(s) 845
BssT1I CCWWGG 1 cut(s) 1974
Bst1107I GTATAC 1 cut(s) 845
Bst2UI CCWGG 1 cut(s) 137
Bst4CI ACNGT 2 cut(s) 915, 2220
Bst6I CTCTTC 2 cut(s) 2277, 2616
BstAUI TGTACA 1 cut(s) 1654
BstC8I GCNNGC 2 cut(s) 122, 181
BstDEI CTNAG 7 cut(s) 6, 263, 581, 1295, 1772, 2033, 2667
BstEII GGTNACC 1 cut(s) 976
BstENI CCTNNNNNAGG 1 cut(s) 639
BstF5I GGATG 9 cut(s) 157, 630, 651, 660, 1234, 1404, 1909, 2257, 2820
BstKTI GATC 8 cut(s) 777, 1032, 2137, 2166, 2397, 2572, 2606, 2751
BstMAI GTCTC 5 cut(s) 742, 1067, 2245, 2388, 2566
BstMBI GATC 8 cut(s) 774, 1029, 2134, 2163, 2394, 2569, 2603, 2748
BstMCI CGRYCG 1 cut(s) 515
BstMWI GCNNNNNNNGC 5 cut(s) 31, 137, 452, 680, 2370
BstNI CCWGG 1 cut(s) 137
BstNSI RCATGY 2 cut(s) 1816, 2100
BstPI GGTNACC 1 cut(s) 976
BstSCI CCNGG 2 cut(s) 135, 1744
BstSFI CTRYAG 1 cut(s) 1317
BstV1I GCAGC 3 cut(s) 129, 430, 1159
BstV2I GAAGAC 4 cut(s) 524, 909, 916, 2425
BstX2I RGATCY 3 cut(s) 2134, 2163, 2569
BstXI CCANNNNNNTGG 1 cut(s) 1981
BstYI RGATCY 3 cut(s) 2134, 2163, 2569
BstZ17I GTATAC 1 cut(s) 845
Bsu15I ATCGAT 1 cut(s) 2606
Bsu36I CCTNAGG 1 cut(s) 1772
BsuRI GGCC 4 cut(s) 179, 489, 555, 2630
BsuTUI ATCGAT 1 cut(s) 2606
BtgZI GCGATG 2 cut(s) 2313, 2463
BtrI CACGTC 4 cut(s) 235, 892, 2239, 2791
BtsCI GGATG 9 cut(s) 157, 630, 651, 660, 1234, 1404, 1909, 2257, 2820
BtsI GCAGTG 1 cut(s) 2702
BtsIMutI CAGTG 3 cut(s) 252, 920, 2702
Cac8I GCNNGC 2 cut(s) 122, 181
Cfr13I GGNCC 3 cut(s) 897, 2149, 2628
ClaI ATCGAT 1 cut(s) 2606
Csp6I GTAC 5 cut(s) 220, 329, 1655, 2038, 2739
CspCI CAANNNNNGTGG 2 cut(s) 51, 86
CviQI GTAC 5 cut(s) 220, 329, 1655, 2038, 2739
DdeI CTNAG 7 cut(s) 6, 263, 581, 1295, 1772, 2033, 2667
DpnI GATC 8 cut(s) 776, 1031, 2136, 2165, 2396, 2571, 2605, 2750
DpnII GATC 8 cut(s) 774, 1029, 2134, 2163, 2394, 2569, 2603, 2748
DraI TTTAAA 3 cut(s) 1422, 1482, 2092
EaeI YGGCCR 2 cut(s) 487, 553
Eam1104I CTCTTC 2 cut(s) 2277, 2616
EarI CTCTTC 2 cut(s) 2277, 2616
Eco130I CCWWGG 1 cut(s) 1974
Eco47I GGWCC 2 cut(s) 897, 2149
Eco57I CTGAAG 3 cut(s) 27, 978, 2141
Eco81I CCTNAGG 1 cut(s) 1772
Eco91I GGTNACC 1 cut(s) 976
EcoNI CCTNNNNNAGG 1 cut(s) 639
EcoO65I GGTNACC 1 cut(s) 976
EcoRII CCWGG 1 cut(s) 135
EcoT14I CCWWGG 1 cut(s) 1974
EcoT22I ATGCAT 1 cut(s) 1524
ErhI CCWWGG 1 cut(s) 1974
Esp3I CGTCTC 1 cut(s) 2245
FalI AAGNNNNNCTT 2 cut(s) 1653, 1685
FauI CCCGC 1 cut(s) 1539
FblI GTMKAC 2 cut(s) 844, 1957
Fnu4HI GCNGC 5 cut(s) 118, 444, 487, 1173, 2020
FokI GGATG 9 cut(s) 164, 617, 658, 667, 1241, 1411, 1916, 2264, 2807
Fsp4HI GCNGC 5 cut(s) 118, 444, 487, 1173, 2020
GluI GCNGC 5 cut(s) 118, 444, 487, 1173, 2020
GsuI CTGGAG 2 cut(s) 50, 2513
HaeIII GGCC 4 cut(s) 179, 489, 555, 2630
HapII CCGG 3 cut(s) 348, 1746, 1901
HincII GTYRAC 4 cut(s) 432, 1436, 1667, 1958
HindII GTYRAC 4 cut(s) 432, 1436, 1667, 1958
HinfI GANTC 8 cut(s) 784, 850, 1387, 1721, 1803, 2142, 2342, 2381
HpaI GTTAAC 1 cut(s) 432
HpaII CCGG 3 cut(s) 348, 1746, 1901
HphI GGTGA 6 cut(s) 85, 988, 1145, 1805, 1853, 2117
Hpy166II GTNNAC 6 cut(s) 432, 845, 897, 1436, 1667, 1958
Hpy8I GTNNAC 6 cut(s) 432, 845, 897, 1436, 1667, 1958
Hpy99I CGWCG 1 cut(s) 236
HpyAV CCTTC 9 cut(s) 290, 319, 399, 953, 1655, 2177, 2765, 2791, 2841
HpyCH4III ACNGT 2 cut(s) 915, 2220
HpyCH4IV ACGT 6 cut(s) 234, 331, 891, 1941, 2238, 2790
HpyF10VI GCNNNNNNNGC 5 cut(s) 31, 137, 452, 680, 2370
HpyF3I CTNAG 7 cut(s) 6, 263, 581, 1295, 1772, 2033, 2667
HpySE526I ACGT 6 cut(s) 234, 331, 891, 1941, 2238, 2790
KspAI GTTAAC 1 cut(s) 432
Kzo9I GATC 8 cut(s) 774, 1029, 2134, 2163, 2394, 2569, 2603, 2748
LguI GCTCTTC 1 cut(s) 2277
LmnI GCTCC 3 cut(s) 31, 1124, 2233
Lsp1109I GCAGC 3 cut(s) 129, 430, 1159
LweI GCATC 4 cut(s) 142, 1894, 2014, 2185
MaeII ACGT 6 cut(s) 234, 331, 891, 1941, 2238, 2790
MaeIII GTNAC 9 cut(s) 169, 313, 602, 700, 976, 1401, 1793, 1808, 2254
MalI GATC 8 cut(s) 776, 1031, 2136, 2165, 2396, 2571, 2605, 2750
MboI GATC 8 cut(s) 774, 1029, 2134, 2163, 2394, 2569, 2603, 2748
MflI RGATCY 3 cut(s) 2134, 2163, 2569
MhlI GDGCHC 1 cut(s) 2238
MlyI GAGTC 2 cut(s) 844, 2390
MmeI TCCRAC 2 cut(s) 804, 1306
Mph1103I ATGCAT 1 cut(s) 1524
MroXI GAANNNNTTC 1 cut(s) 1848
MslI CAYNNNNRTG 5 cut(s) 20, 63, 2010, 2250, 2651
MspI CCGG 3 cut(s) 348, 1746, 1901
MspR9I CCNGG 2 cut(s) 137, 1746
Mva1269I GAATGC 2 cut(s) 94, 1571
MvaI CCWGG 1 cut(s) 137
MwoI GCNNNNNNNGC 5 cut(s) 31, 137, 452, 680, 2370
NciI CCSGG 1 cut(s) 1746
NdeII GATC 8 cut(s) 774, 1029, 2134, 2163, 2394, 2569, 2603, 2748
NlaIV GGNNCC 4 cut(s) 623, 744, 2165, 2374
NmeAIII GCCGAG 2 cut(s) 181, 581
NmuCI GTSAC 5 cut(s) 169, 976, 1401, 1793, 1808
NsiI ATGCAT 1 cut(s) 1524
NspI RCATGY 2 cut(s) 1816, 2100
PciSI GCTCTTC 1 cut(s) 2277
PcsI WCGNNNNNNNCGW 3 cut(s) 228, 897, 2787
PctI GAATGC 2 cut(s) 94, 1571
PdmI GAANNNNTTC 1 cut(s) 1848
PfeI GAWTC 6 cut(s) 784, 1387, 1721, 1803, 2142, 2342
Pfl23II CGTACG 1 cut(s) 219
PkrI GCNGC 5 cut(s) 119, 445, 488, 1174, 2021
PleI GAGTC 2 cut(s) 844, 2389
PpsI GAGTC 2 cut(s) 844, 2389
PshBI ATTAAT 1 cut(s) 1847
PsiI TTATAA 2 cut(s) 1626, 2028
Psp6I CCWGG 1 cut(s) 135
PspEI GGTNACC 1 cut(s) 976
PspGI CCWGG 1 cut(s) 135
PspLI CGTACG 1 cut(s) 219
PspN4I GGNNCC 4 cut(s) 623, 744, 2165, 2374
PspPI GGNCC 3 cut(s) 897, 2149, 2628
PsuI RGATCY 3 cut(s) 2134, 2163, 2569
RsaI GTAC 5 cut(s) 221, 330, 1656, 2039, 2740
RsaNI GTAC 5 cut(s) 220, 329, 1655, 2038, 2739
RseI CAYNNNNRTG 5 cut(s) 20, 63, 2010, 2250, 2651
SalI GTCGAC 1 cut(s) 1956
SapI GCTCTTC 1 cut(s) 2277
SatI GCNGC 5 cut(s) 118, 444, 487, 1173, 2020
Sau3AI GATC 8 cut(s) 774, 1029, 2134, 2163, 2394, 2569, 2603, 2748
Sau96I GGNCC 3 cut(s) 897, 2149, 2628
SchI GAGTC 2 cut(s) 844, 2390
ScrFI CCNGG 2 cut(s) 137, 1746
SduI GDGCHC 1 cut(s) 2238
SfaNI GCATC 4 cut(s) 142, 1894, 2014, 2185
SfcI CTRYAG 1 cut(s) 1317
SinI GGWCC 2 cut(s) 897, 2149
SmiMI CAYNNNNRTG 5 cut(s) 20, 63, 2010, 2250, 2651
SmlI CTYRAG 3 cut(s) 146, 1961, 2563
SmoI CTYRAG 3 cut(s) 146, 1961, 2563
SpeI ACTAGT 1 cut(s) 1019
SsiI CCGC 5 cut(s) 275, 486, 1462, 1546, 2019
SspI AATATT 3 cut(s) 942, 1350, 2181
StyD4I CCNGG 2 cut(s) 135, 1744
StyI CCWWGG 1 cut(s) 1974
TaaI ACNGT 2 cut(s) 915, 2220
TaiI ACGT 6 cut(s) 237, 334, 894, 1944, 2241, 2793
TaqI TCGA 5 cut(s) 437, 1957, 2388, 2606, 2751
TaqII GACCGA 4 cut(s) 529, 914, 921, 1796
TatI WGTACW 1 cut(s) 1654
TauI GCSGC 2 cut(s) 489, 2022
TfiI GAWTC 6 cut(s) 784, 1387, 1721, 1803, 2142, 2342
TscAI CASTG 3 cut(s) 259, 920, 2709
TseFI GTSAC 5 cut(s) 169, 976, 1401, 1793, 1808
TseI GCWGC 3 cut(s) 117, 443, 1172
Tsp45I GTSAC 5 cut(s) 169, 976, 1401, 1793, 1808
TspRI CASTG 3 cut(s) 259, 920, 2709
VpaK11BI GGWCC 2 cut(s) 897, 2149
VspI ATTAAT 1 cut(s) 1847
XagI CCTNNNNNAGG 1 cut(s) 639
XapI RAATTY 7 cut(s) 811, 1783, 1867, 2335, 2441, 2487, 2534
XbaI TCTAGA 1 cut(s) 787
XceI RCATGY 2 cut(s) 1816, 2100
XmiI GTMKAC 2 cut(s) 844, 1957
XmnI GAANNNNTTC 1 cut(s) 1848
Zsp2I ATGCAT 1 cut(s) 1524
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.