MD08G1094800.v1.1

disease resistance protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
7958173 .. 7960873
2701 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1094800.v1.1.491

Sequence Viewer

Length: 2316 bp
ATGGCCGAGGCACTCATTTCCGTGCTTCTCGAACAACTGGCTTCGGTAACGTACCAACAAGTCGGAGAAGAGGTGAAGCTGGTTTTGAATGCTAAAAAAGATGTTGATGCATTTGCTGCCAACCTTGAAGCGATTGGTGCTGTGCTTGAGGGTGCGGAGCAGAGGCAAGTGAAGGAGGCCAGCGTCAGAAATTGGCTGGAGAAGCTGAAAGATGTGTCGTACAAGATGGACAATGTGCTGGATGAGTGGAAGACTGAAATACTGAAACAACAAGTTGAGAAAGAAGAAGAGCACGGTGGAAGTACTTCTCTTGTTAATAAGAAGAAGAAGAAGAAGGCGTTGTTGAACGAGAGTAGTCCAGAAGCGAGCGGTCTCCTTGTCATCCCTATTGTTGGGATGGGAGGAATGGGAAAAACAACTCTGGCTCAATTGGCTTTTAACGATGAAAATGTTAAAGCTTGTTTTGATATCAAAATATGGGTTTGTGTTTCGGACCCTTTTGATGAGATCAAAACTGCCAAAGCCATCATTTCTGGCGCCAAAGGTGTCAGCCCAAATTCAACTACTTTGCAAGATTTGTTTCAGTGTATGTCTGAATCCATTAAGGGAAAGAAGTTTCTCCTTGTCCTAGACGATGTGTGGACTGAAGACCAAAGAAAGTGGGAGAAATTGAAGTTGCCATTAATACAAAGTGGCGCCCGTGGCAGTAGAATATTGGTGACAACTCGAAAACAAGAGGTTGCTGTTATGATGGGAGCTACCACTCACATGATCCATTTGGAGAGGTTGAGTGAACAAAATTGTTTGTCAATATTCAACTGCATGGCATTTTTTAATAGGGAAAATGATAGTGTGTTGAGAGCCATTGGTGAAGAAATTGCAAAAAAGTGCAAGGGTTTGCCTCTTGCTGCAAAGATTCTGGGCAGTCTCATGCGTTATAAGCAAACGAGGAAAGAATGGCAAGAAGTTTTGAACAGTAAGATATGGGAGCTAGAAGAGGTTGAGCAACAAGTTTTCCAACCGCTATTATCGAGTTATTTTGATTTGGCACCTGCGGTCAAACGATGCCTTTTATATTGTGCTATTTTTCCAAAAGATCATCAGATTGATAAAGATCATTTGATTGAGTTATGGATGTCACAAGATTATCTCTATTCAAAAGGAAACATAGAGAAGAAAATAATTGGCCAAAGGCTTTTTGATAATTTAATAATGCGATCTTTCTTCCAAGACTTTGAAGAAGACGACGTTGGAAATATCTGGAAGTGTAAAATGCATGATATTGTGCACGACTTTCTACTGTTTCTTAATCAAAACGAATGCTTTACAATGGAGGTTAAGGGTGGTAACTATACAACAGAGACCTTGAGTGATAAGATTAGCCATTTGACCTTAGTGCTTGCACCTGAAGGTCCACTCTCATGTTTGAAACATCTTAGGACATTGAATTTGAGTGGTAATTGTATTGAAGAGCTTCTGGAAGAGATAGGTGAATTGGTGCATCTGAGGTTCATTGATTTGTCTAAAAATTATGGTTTGAAAAAGCTACCCAAGGCGGTGTGTAATTTATACAATTTGCAGACATTGCGCCTTATTAGGTGTGAGAAACTTGAAAGTCTACCTCAGAGCATGGGAAAGTTGATTAACTTAAAGCATCTTTATGCTTGGGGTTGCTTTAAGCTGAAGTACTTGCCGAAAGGGATTGAGAGATTAACAAATCTAAGAGGATTAGATCAGTGCCCTGTTGGCGGTGGTAAAGACGACGATGAAGCGTTCAAATTAGGAGATTTGAGAAACTTAGACCAACTTTGTGAACTTTGGATAGTAATTCATGGGGATGTGAAAATTGCTGCGGGTGAGGGTGAGAAAGCATCACCCCTGGGGAACAAACATCAACTCTCAAAATTGATTATATCTTTTCATTGGGAAGATGAGGAGAGAAGAAGTGCAGAAATACTGAATTTCTTACAACCGCATCCAAATTTGGAATCTTTAGATATTAGAGGGCATAATGGAAGCAGTGCCCCTAACTGGATCATGTCATTAAACAATTTGAGATATCTTCTACTTTCTGATTGGGAAGAATGTGAAGTTTTACCTCCTTTGGGAAAATTGCCGTCCCTCGTAAAACTGTCGCTTATTGATATGAAAGGAGTAAAAAAGGTTGGAGTTGAGTTTATGGGAATAGAAAAGGAAATGTCATCAGCATCATCATGCATTACTCTATTCCCAAAATTGAAAGCACTCGAATTTTACTCCATGGGAGCGTGGGAAGAGTGGAAAGGAGTGGAAGATTTTGGGGCTGCAGTCAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

772

Amino Acids

87.25

Weight (kDa)

5.94

Isoelectric Point (pI)

43.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 97 1.3e-18 Rx N-terminal domain
NB-ARC PF00931 111 - 279 9.1e-33 NB-ARC domain
WHD_DRP PF23559 362 - 432 4.4e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 472 - 752 2.8e-33 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 594 - 716 1.3e-23 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 939
AarI CACCTGC 1 cut(s) 1060
Acc36I ACCTGC 1 cut(s) 1060
AccB1I GGYRCC 3 cut(s) 536, 695, 1048
AccBSI CCGCTC 1 cut(s) 369
AccI GTMKAC 1 cut(s) 1618
AciI CCGC 8 cut(s) 155, 369, 1022, 1055, 1556, 1749, 1853, 1973
AclWI GGATC 2 cut(s) 766, 2042
AcoI YGGCCR 2 cut(s) 3, 1186
AcsI RAATTY 5 cut(s) 556, 1447, 1960, 1981, 2249
AcuI CTGAAG 3 cut(s) 666, 1428, 1703
AcyI GRCGYC 2 cut(s) 537, 696
AfaI GTAC 4 cut(s) 53, 221, 304, 1688
AfiI CCNNNNNNNGG 4 cut(s) 392, 1748, 2031, 2105
AjnI CCWGG 1 cut(s) 1878
AjuI GAANNNNNNNTTGG 2 cut(s) 1233, 1265
AluBI AGCT 9 cut(s) 79, 205, 458, 758, 991, 1474, 1546, 1681, 2313
AluI AGCT 9 cut(s) 79, 205, 458, 758, 991, 1474, 1546, 1681, 2313
Alw21I GWGCWC 2 cut(s) 294, 1290
Alw26I GTCTC 3 cut(s) 377, 932, 1355
Alw44I GTGCAC 1 cut(s) 1286
AlwI GGATC 2 cut(s) 766, 2042
AoxI GGCC 3 cut(s) 3, 177, 1186
ApaLI GTGCAC 1 cut(s) 1286
ApeKI GCWGC 4 cut(s) 116, 908, 1850, 2303
ApoI RAATTY 5 cut(s) 556, 1447, 1960, 1981, 2249
ArsI GACNNNNNNTTYG 2 cut(s) 1432, 1464
AseI ATTAAT 1 cut(s) 683
Asp700I GAANNNNTTC 2 cut(s) 304, 1473
AspLEI GCGC 3 cut(s) 539, 698, 1590
AspS9I GGNCC 2 cut(s) 493, 1412
AsuHPI GGTGA 7 cut(s) 85, 730, 881, 1502, 1866, 1868, 1874
AvaII GGWCC 2 cut(s) 493, 1412
BaeGI GKGCMC 3 cut(s) 1290, 1742, 2026
BalI TGGCCA 1 cut(s) 1188
BanI GGYRCC 3 cut(s) 536, 695, 1048
BbsI GAAGAC 3 cut(s) 257, 654, 1248
Bbv12I GWGCWC 2 cut(s) 294, 1290
BbvI GCAGC 4 cut(s) 103, 895, 1837, 2290
BccI CCATC 4 cut(s) 220, 391, 533, 745
BceAI ACGGC 1 cut(s) 2101
BciT130I CCWGG 1 cut(s) 1880
BcoDI GTCTC 3 cut(s) 377, 932, 1355
BfaI CTAG 2 cut(s) 629, 992
BfmI CTRYAG 1 cut(s) 2304
BfoI RGCGCY 2 cut(s) 540, 699
BfuAI ACCTGC 1 cut(s) 1060
BglI GCCNNNNNGGC 1 cut(s) 1746
BisI GCNGC 4 cut(s) 117, 909, 1851, 2304
BlsI GCNGC 4 cut(s) 118, 910, 1852, 2305
BmcAI AGTACT 2 cut(s) 304, 1688
Bme1390I CCNGG 1 cut(s) 1880
Bme18I GGWCC 2 cut(s) 493, 1412
BmgT120I GGNCC 2 cut(s) 493, 1412
BmiI GGNNCC 4 cut(s) 495, 538, 697, 1050
BmrFI CCNGG 1 cut(s) 1880
BmsI GCATC 7 cut(s) 97, 1055, 1510, 1663, 1880, 1984, 2216
BpiI GAAGAC 3 cut(s) 257, 654, 1248
BpmI CTGGAG 1 cut(s) 218
BpuEI CTTGAG 2 cut(s) 167, 1387
BsaBI GATNNNNATC 1 cut(s) 1113
BsaHI GRCGYC 2 cut(s) 537, 696
BsaI GGTCTC 2 cut(s) 377, 1355
BsaJI CCNNGG 6 cut(s) 6, 700, 1551, 1878, 1879, 2259
BsaXI ACNNNNNCTCC 2 cut(s) 57, 87
Bsc4I CCNNNNNNNGG 4 cut(s) 392, 1748, 2031, 2105
Bse1I ACTGG 2 cut(s) 42, 2036
Bse3DI GCAATG 1 cut(s) 1583
Bse8I GATNNNNATC 1 cut(s) 1113
BseBI CCWGG 1 cut(s) 1880
BseDI CCNNGG 6 cut(s) 6, 700, 1551, 1878, 1879, 2259
BseGI GGATG 6 cut(s) 247, 381, 402, 1140, 1843, 1975
BseJI GATNNNNATC 1 cut(s) 1113
BseLI CCNNNNNNNGG 4 cut(s) 392, 1748, 2031, 2105
BseMI GCAATG 1 cut(s) 1583
BseMII CTCAG 2 cut(s) 1496, 1637
BseNI ACTGG 2 cut(s) 42, 2036
BseRI GAGGAG 1 cut(s) 1949
BseSI GKGCMC 3 cut(s) 1290, 1742, 2026
BseXI GCAGC 4 cut(s) 103, 895, 1837, 2290
BsgI GTGCAG 1 cut(s) 1968
BshFI GGCC 3 cut(s) 5, 179, 1188
BshNI GGYRCC 3 cut(s) 536, 695, 1048
BsiHKAI GWGCWC 2 cut(s) 294, 1290
BslFI GGGAC 1 cut(s) 2104
BslI CCNNNNNNNGG 4 cut(s) 392, 1748, 2031, 2105
BsmAI GTCTC 3 cut(s) 377, 932, 1355
BsmFI GGGAC 1 cut(s) 2104
BsmI GAATGC 2 cut(s) 94, 1325
BsnI GGCC 3 cut(s) 5, 179, 1188
Bso31I GGTCTC 2 cut(s) 377, 1355
Bsp1286I GDGCHC 4 cut(s) 294, 1290, 1742, 2026
Bsp143I GATC 7 cut(s) 507, 771, 1096, 1114, 1217, 1732, 2034
Bsp19I CCATGG 1 cut(s) 2259
BspACI CCGC 8 cut(s) 155, 369, 1022, 1055, 1556, 1749, 1853, 1973
BspANI GGCC 3 cut(s) 5, 179, 1188
BspCNI CTCAG 2 cut(s) 1497, 1636
BspLI GGNNCC 4 cut(s) 495, 538, 697, 1050
BspMAI CTGCAG 1 cut(s) 2308
BspMI ACCTGC 1 cut(s) 1060
BspPI GGATC 2 cut(s) 766, 2042
BspQI GCTCTTC 2 cut(s) 282, 1464
BspT107I GGYRCC 3 cut(s) 536, 695, 1048
BspTNI GGTCTC 2 cut(s) 377, 1355
BsrBI CCGCTC 1 cut(s) 369
BsrDI GCAATG 1 cut(s) 1583
BsrI ACTGG 2 cut(s) 42, 2036
BssECI CCNNGG 6 cut(s) 6, 700, 1551, 1878, 1879, 2259
BssMI GATC 7 cut(s) 507, 771, 1096, 1114, 1217, 1732, 2034
BssNI GRCGYC 2 cut(s) 537, 696
BssT1I CCWWGG 2 cut(s) 1551, 2259
Bst2UI CCWGG 1 cut(s) 1880
Bst4CI ACNGT 4 cut(s) 296, 977, 1302, 2133
Bst6I CTCTTC 6 cut(s) 63, 282, 990, 1464, 1476, 2268
BstACI GRCGYC 2 cut(s) 537, 696
BstAPI GCANNNNNTGC 2 cut(s) 116, 1585
BstC8I GCNNGC 3 cut(s) 181, 367, 1401
BstDEI CTNAG 6 cut(s) 1393, 1436, 1505, 1623, 1721, 1798
BstDSI CCRYGG 2 cut(s) 700, 2259
BstF5I GGATG 6 cut(s) 247, 381, 402, 1140, 1843, 1975
BstH2I RGCGCY 2 cut(s) 540, 699
BstHHI GCGC 3 cut(s) 539, 698, 1590
BstKTI GATC 7 cut(s) 510, 774, 1099, 1117, 1220, 1735, 2037
BstMAI GTCTC 3 cut(s) 377, 932, 1355
BstMBI GATC 7 cut(s) 507, 771, 1096, 1114, 1217, 1732, 2034
BstMWI GCNNNNNNNGC 8 cut(s) 116, 137, 202, 431, 702, 940, 1585, 1746
BstNI CCWGG 1 cut(s) 1880
BstSCI CCNGG 1 cut(s) 1878
BstSFI CTRYAG 1 cut(s) 2304
BstSLI GKGCMC 3 cut(s) 1290, 1742, 2026
BstV1I GCAGC 4 cut(s) 103, 895, 1837, 2290
BstV2I GAAGAC 3 cut(s) 257, 654, 1248
BsuRI GGCC 3 cut(s) 5, 179, 1188
BtgI CCRYGG 2 cut(s) 700, 2259
BtsCI GGATG 6 cut(s) 247, 381, 402, 1140, 1843, 1975
BtsI GCAGTG 1 cut(s) 2026
BtsIMutI CAGTG 3 cut(s) 590, 1742, 2026
BveI ACCTGC 1 cut(s) 1060
Cac8I GCNNGC 3 cut(s) 181, 367, 1401
CfoI GCGC 3 cut(s) 539, 698, 1590
Cfr13I GGNCC 2 cut(s) 493, 1412
CseI GACGC 1 cut(s) 172
Csp6I GTAC 4 cut(s) 52, 220, 303, 1687
CspCI CAANNNNNGTGG 2 cut(s) 641, 676
CviQI GTAC 4 cut(s) 52, 220, 303, 1687
DdeI CTNAG 6 cut(s) 1393, 1436, 1505, 1623, 1721, 1798
DinI GGCGCC 2 cut(s) 538, 697
DpnI GATC 7 cut(s) 509, 773, 1098, 1116, 1219, 1734, 2036
DpnII GATC 7 cut(s) 507, 771, 1096, 1114, 1217, 1732, 2034
EaeI YGGCCR 2 cut(s) 3, 1186
Eam1104I CTCTTC 6 cut(s) 63, 282, 990, 1464, 1476, 2268
EarI CTCTTC 6 cut(s) 63, 282, 990, 1464, 1476, 2268
Eco130I CCWWGG 2 cut(s) 1551, 2259
Eco31I GGTCTC 2 cut(s) 377, 1355
Eco32I GATATC 2 cut(s) 469, 2060
Eco47I GGWCC 2 cut(s) 493, 1412
Eco57I CTGAAG 3 cut(s) 666, 1428, 1703
EcoRII CCWGG 1 cut(s) 1878
EcoRV GATATC 2 cut(s) 469, 2060
EcoT14I CCWWGG 2 cut(s) 1551, 2259
EcoT22I ATGCAT 3 cut(s) 112, 1278, 2219
EgeI GGCGCC 2 cut(s) 538, 697
EheI GGCGCC 2 cut(s) 538, 697
ErhI CCWWGG 2 cut(s) 1551, 2259
FaqI GGGAC 1 cut(s) 2104
FauI CCCGC 1 cut(s) 1846
FblI GTMKAC 1 cut(s) 1618
Fnu4HI GCNGC 4 cut(s) 117, 909, 1851, 2304
FokI GGATG 6 cut(s) 254, 368, 409, 1147, 1850, 1962
Fsp4HI GCNGC 4 cut(s) 117, 909, 1851, 2304
FspBI CTAG 2 cut(s) 629, 992
GlaI GCGC 3 cut(s) 538, 697, 1589
GluI GCNGC 4 cut(s) 117, 909, 1851, 2304
GsuI CTGGAG 1 cut(s) 218
HaeII RGCGCY 2 cut(s) 540, 699
HaeIII GGCC 3 cut(s) 5, 179, 1188
HgaI GACGC 1 cut(s) 172
HhaI GCGC 3 cut(s) 539, 698, 1590
Hin1I GRCGYC 2 cut(s) 537, 696
Hin6I GCGC 3 cut(s) 537, 696, 1588
HinP1I GCGC 3 cut(s) 537, 696, 1588
HindIII AAGCTT 1 cut(s) 456
HinfI GANTC 3 cut(s) 596, 916, 1988
HphI GGTGA 7 cut(s) 85, 730, 881, 1502, 1866, 1868, 1874
Hpy166II GTNNAC 6 cut(s) 642, 794, 1288, 1415, 1619, 1814
Hpy188I TCNGA 8 cut(s) 65, 188, 493, 595, 1104, 1506, 1626, 2074
Hpy188III TCNNGA 4 cut(s) 29, 359, 1261, 1478
Hpy8I GTNNAC 6 cut(s) 642, 794, 1288, 1415, 1619, 1814
Hpy99I CGWCG 2 cut(s) 1250, 1766
HpyAV CCTTC 3 cut(s) 166, 328, 1403
HpyCH4III ACNGT 4 cut(s) 296, 977, 1302, 2133
HpyCH4IV ACGT 2 cut(s) 50, 1248
HpyF10VI GCNNNNNNNGC 8 cut(s) 116, 137, 202, 431, 702, 940, 1585, 1746
HpyF3I CTNAG 6 cut(s) 1393, 1436, 1505, 1623, 1721, 1798
HpySE526I ACGT 2 cut(s) 50, 1248
Hsp92I GRCGYC 2 cut(s) 537, 696
HspAI GCGC 3 cut(s) 537, 696, 1588
KasI GGCGCC 2 cut(s) 536, 695
Kzo9I GATC 7 cut(s) 507, 771, 1096, 1114, 1217, 1732, 2034
LguI GCTCTTC 2 cut(s) 282, 1464
LmnI GCTCC 4 cut(s) 157, 755, 988, 2264
Lsp1109I GCAGC 4 cut(s) 103, 895, 1837, 2290
LweI GCATC 7 cut(s) 97, 1055, 1510, 1663, 1880, 1984, 2216
MaeI CTAG 2 cut(s) 629, 992
MaeII ACGT 2 cut(s) 50, 1248
MaeIII GTNAC 4 cut(s) 46, 718, 1137, 1346
MalI GATC 7 cut(s) 509, 773, 1098, 1116, 1219, 1734, 2036
MbiI CCGCTC 1 cut(s) 369
MboI GATC 7 cut(s) 507, 771, 1096, 1114, 1217, 1732, 2034
MfeI CAATTG 1 cut(s) 428
MhlI GDGCHC 4 cut(s) 294, 1290, 1742, 2026
MlsI TGGCCA 1 cut(s) 1188
MluNI TGGCCA 1 cut(s) 1188
Mly113I GGCGCC 2 cut(s) 537, 696
MmeI TCCRAC 4 cut(s) 43, 1042, 1231, 2146
Mox20I TGGCCA 1 cut(s) 1188
Mph1103I ATGCAT 3 cut(s) 112, 1278, 2219
MroXI GAANNNNTTC 2 cut(s) 304, 1473
MscI TGGCCA 1 cut(s) 1188
MslI CAYNNNNRTG 6 cut(s) 20, 767, 1420, 1659, 1836, 2212
Msp20I TGGCCA 1 cut(s) 1188
MspR9I CCNGG 1 cut(s) 1880
MunI CAATTG 1 cut(s) 428
Mva1269I GAATGC 2 cut(s) 94, 1325
MvaI CCWGG 1 cut(s) 1880
MwoI GCNNNNNNNGC 8 cut(s) 116, 137, 202, 431, 702, 940, 1585, 1746
NarI GGCGCC 2 cut(s) 537, 696
NcoI CCATGG 1 cut(s) 2259
NdeII GATC 7 cut(s) 507, 771, 1096, 1114, 1217, 1732, 2034
NlaIV GGNNCC 4 cut(s) 495, 538, 697, 1050
NmeAIII GCCGAG 1 cut(s) 31
NmuCI GTSAC 2 cut(s) 718, 1137
NsiI ATGCAT 3 cut(s) 112, 1278, 2219
PaqCI CACCTGC 1 cut(s) 1060
PasI CCCWGGG 1 cut(s) 1879
PciSI GCTCTTC 2 cut(s) 282, 1464
PctI GAATGC 2 cut(s) 94, 1325
PdmI GAANNNNTTC 2 cut(s) 304, 1473
PfeI GAWTC 3 cut(s) 596, 916, 1988
PkrI GCNGC 4 cut(s) 118, 910, 1852, 2305
PluTI GGCGCC 2 cut(s) 540, 699
PshBI ATTAAT 1 cut(s) 683
PsiI TTATAA 1 cut(s) 939
Psp6I CCWGG 1 cut(s) 1878
PspGI CCWGG 1 cut(s) 1878
PspN4I GGNNCC 4 cut(s) 495, 538, 697, 1050
PspPI GGNCC 2 cut(s) 493, 1412
PstI CTGCAG 1 cut(s) 2308
RsaI GTAC 4 cut(s) 53, 221, 304, 1688
RsaNI GTAC 4 cut(s) 52, 220, 303, 1687
RseI CAYNNNNRTG 6 cut(s) 20, 767, 1420, 1659, 1836, 2212
SapI GCTCTTC 2 cut(s) 282, 1464
SatI GCNGC 4 cut(s) 117, 909, 1851, 2304
Sau3AI GATC 7 cut(s) 507, 771, 1096, 1114, 1217, 1732, 2034
Sau96I GGNCC 2 cut(s) 493, 1412
ScaI AGTACT 2 cut(s) 304, 1688
ScrFI CCNGG 1 cut(s) 1880
SduI GDGCHC 4 cut(s) 294, 1290, 1742, 2026
SfaNI GCATC 7 cut(s) 97, 1055, 1510, 1663, 1880, 1984, 2216
SfcI CTRYAG 1 cut(s) 2304
SfoI GGCGCC 2 cut(s) 538, 697
SinI GGWCC 2 cut(s) 493, 1412
SmiMI CAYNNNNRTG 6 cut(s) 20, 767, 1420, 1659, 1836, 2212
SmlI CTYRAG 2 cut(s) 146, 1366
SmoI CTYRAG 2 cut(s) 146, 1366
SsiI CCGC 8 cut(s) 155, 369, 1022, 1055, 1556, 1749, 1853, 1973
SspDI GGCGCC 2 cut(s) 536, 695
SspI AATATT 2 cut(s) 714, 813
SspMI CTAG 2 cut(s) 629, 992
StyD4I CCNGG 1 cut(s) 1878
StyI CCWWGG 2 cut(s) 1551, 2259
TaaI ACNGT 4 cut(s) 296, 977, 1302, 2133
TaiI ACGT 2 cut(s) 53, 1251
TaqI TCGA 4 cut(s) 30, 727, 1031, 2247
TatI WGTACW 2 cut(s) 302, 1686
TfiI GAWTC 3 cut(s) 596, 916, 1988
TscAI CASTG 3 cut(s) 590, 1742, 2026
TseFI GTSAC 2 cut(s) 718, 1137
TseI GCWGC 4 cut(s) 116, 908, 1850, 2303
Tsp45I GTSAC 2 cut(s) 718, 1137
TspDTI ATGAA 6 cut(s) 459, 1501, 1782, 1820, 1910, 2162
TspGWI ACGGA 1 cut(s) 10
TspRI CASTG 3 cut(s) 590, 1742, 2026
VneI GTGCAC 1 cut(s) 1286
VpaK11BI GGWCC 2 cut(s) 493, 1412
VspI ATTAAT 1 cut(s) 683
XapI RAATTY 5 cut(s) 556, 1447, 1960, 1981, 2249
XmiI GTMKAC 1 cut(s) 1618
XmnI GAANNNNTTC 2 cut(s) 304, 1473
XspI CTAG 2 cut(s) 629, 992
ZrmI AGTACT 2 cut(s) 304, 1688
Zsp2I ATGCAT 3 cut(s) 112, 1278, 2219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.