disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 123 - 205 | 3.7e-18 | Rx N-terminal domain |
| NB-ARC | PF00931 | 297 - 469 | 1.1e-30 | NB-ARC domain |
| WHD_DRP | PF23559 | 555 - 626 | 5.1e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 703 - 1015 | 5.6e-20 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 823 - 943 | 3.2e-22 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1017, 3626 |
| Acc36I | ACCTGC | 1 cut(s) | 2277 |
| AccB1I | GGYRCC | 3 cut(s) | 1118, 1246, 2702 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1810 |
| AccBSI | CCGCTC | 2 cut(s) | 3358, 3695 |
| AccI | GTMKAC | 1 cut(s) | 2264 |
| AccII | CGCG | 4 cut(s) | 13, 739, 3265, 3423 |
| AciI | CCGC | 7 cut(s) | 13, 482, 981, 1528, 3246, 3358, 3693 |
| AclWI | GGATC | 8 cut(s) | 135, 524, 534, 1572, 3256, 3411, 3523, 3544 |
| AcsI | RAATTY | 7 cut(s) | 437, 2029, 2095, 2131, 2861, 3213, 3293 |
| AcuI | CTGAAG | 2 cut(s) | 377, 3193 |
| AcyI | GRCGYC | 1 cut(s) | 2703 |
| AfaI | GTAC | 7 cut(s) | 2038, 2184, 2255, 2372, 3289, 3317, 3667 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 111, 513, 971, 1810, 2792, 3375, 3395, 3612, 3699 |
| AflII | CTTAAG | 1 cut(s) | 1972 |
| AflIII | ACRYGT | 1 cut(s) | 406 |
| AhlI | ACTAGT | 1 cut(s) | 1009 |
| AjiI | CACGTC | 1 cut(s) | 562 |
| AjnI | CCWGG | 1 cut(s) | 3531 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 395, 427 |
| AleI | CACNNNNGTG | 1 cut(s) | 1221 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3663, 3695 |
| Alw26I | GTCTC | 6 cut(s) | 586, 1072, 1508, 2386, 2475, 2507 |
| AlwI | GGATC | 8 cut(s) | 135, 524, 534, 1572, 3256, 3411, 3523, 3544 |
| Ama87I | CYCGRG | 1 cut(s) | 2059 |
| AoxI | GGCC | 5 cut(s) | 113, 504, 1623, 2497, 3115 |
| ApeKI | GCWGC | 2 cut(s) | 687, 3598 |
| ApoI | RAATTY | 7 cut(s) | 437, 2029, 2095, 2131, 2861, 3213, 3293 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 530, 562, 2116, 2148 |
| AseI | ATTAAT | 2 cut(s) | 1701, 2595 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1956, 2596 |
| AspLEI | GCGC | 3 cut(s) | 739, 2274, 2705 |
| AspS9I | GGNCC | 6 cut(s) | 113, 1072, 1141, 1624, 2497, 3116 |
| AvaI | CYCGRG | 1 cut(s) | 2059 |
| AvaII | GGWCC | 2 cut(s) | 1072, 1141 |
| BaeGI | GKGCMC | 2 cut(s) | 1123, 1249 |
| BanI | GGYRCC | 3 cut(s) | 1118, 1246, 2702 |
| BanII | GRGCYC | 1 cut(s) | 954 |
| BauI | CACGAG | 1 cut(s) | 3383 |
| BbsI | GAAGAC | 2 cut(s) | 854, 998 |
| BbvI | GCAGC | 2 cut(s) | 674, 3585 |
| BceAI | ACGGC | 3 cut(s) | 857, 2484, 3648 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3601, 3635 |
| BciT130I | CCWGG | 1 cut(s) | 3533 |
| BclI | TGATCA | 1 cut(s) | 1905 |
| BcoDI | GTCTC | 6 cut(s) | 586, 1072, 1508, 2386, 2475, 2507 |
| BcuI | ACTAGT | 1 cut(s) | 1009 |
| BfaI | CTAG | 7 cut(s) | 684, 971, 1001, 1010, 1199, 1538, 1659 |
| BfmI | CTRYAG | 1 cut(s) | 2823 |
| BfoI | RGCGCY | 1 cut(s) | 2706 |
| BfrI | CTTAAG | 1 cut(s) | 1972 |
| BfuAI | ACCTGC | 1 cut(s) | 2277 |
| BglII | AGATCT | 4 cut(s) | 751, 1166, 2473, 3051 |
| BisI | GCNGC | 2 cut(s) | 688, 3599 |
| BlsI | GCNGC | 2 cut(s) | 689, 3600 |
| BmcAI | AGTACT | 1 cut(s) | 2372 |
| Bme1390I | CCNGG | 1 cut(s) | 3533 |
| Bme18I | GGWCC | 2 cut(s) | 1072, 1141 |
| BmeT110I | CYCGRG | 1 cut(s) | 2059 |
| BmgBI | CACGTC | 1 cut(s) | 562 |
| BmgT120I | GGNCC | 6 cut(s) | 113, 1072, 1141, 1624, 2497, 3116 |
| BmrFI | CCNGG | 1 cut(s) | 3533 |
| BmrI | ACTGGG | 1 cut(s) | 2477 |
| BmsI | GCATC | 3 cut(s) | 406, 469, 619 |
| BmuI | ACTGGG | 1 cut(s) | 2477 |
| BpiI | GAAGAC | 2 cut(s) | 854, 998 |
| BpmI | CTGGAG | 1 cut(s) | 2387 |
| BpuEI | CTTGAG | 3 cut(s) | 2513, 2567, 3327 |
| Bsa29I | ATCGAT | 1 cut(s) | 139 |
| BsaAI | YACGTR | 2 cut(s) | 2036, 3287 |
| BsaHI | GRCGYC | 1 cut(s) | 2703 |
| BsaJI | CCNNGG | 4 cut(s) | 3389, 3532, 3611, 3698 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 111, 513, 971, 1810, 2792, 3375, 3395, 3612, 3699 |
| Bse1I | ACTGG | 1 cut(s) | 2472 |
| Bse3DI | GCAATG | 6 cut(s) | 53, 136, 299, 732, 1936, 3248 |
| BseBI | CCWGG | 1 cut(s) | 3533 |
| BseCI | ATCGAT | 1 cut(s) | 139 |
| BseDI | CCNNGG | 4 cut(s) | 3389, 3532, 3611, 3698 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 111, 513, 971, 1810, 2792, 3375, 3395, 3612, 3699 |
| BseMI | GCAATG | 6 cut(s) | 53, 136, 299, 732, 1936, 3248 |
| BseMII | CTCAG | 3 cut(s) | 581, 2518, 3348 |
| BseNI | ACTGG | 1 cut(s) | 2472 |
| BseRI | GAGGAG | 1 cut(s) | 2778 |
| BseSI | GKGCMC | 2 cut(s) | 1123, 1249 |
| BseXI | GCAGC | 2 cut(s) | 674, 3585 |
| BsgI | GTGCAG | 1 cut(s) | 3267 |
| Bsh1236I | CGCG | 4 cut(s) | 13, 739, 3265, 3423 |
| BshFI | GGCC | 5 cut(s) | 115, 506, 1625, 2499, 3117 |
| BshNI | GGYRCC | 3 cut(s) | 1118, 1246, 2702 |
| BshVI | ATCGAT | 1 cut(s) | 139 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2059 |
| BsiSI | CCGG | 1 cut(s) | 2234 |
| BslFI | GGGAC | 1 cut(s) | 2144 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 111, 513, 971, 1810, 2792, 3375, 3395, 3612, 3699 |
| BsmAI | GTCTC | 6 cut(s) | 586, 1072, 1508, 2386, 2475, 2507 |
| BsmBI | CGTCTC | 1 cut(s) | 2507 |
| BsmFI | GGGAC | 1 cut(s) | 2144 |
| BsmI | GAATGC | 4 cut(s) | 822, 2685, 2695, 2777 |
| BsnI | GGCC | 5 cut(s) | 115, 506, 1625, 2499, 3117 |
| BsoBI | CYCGRG | 1 cut(s) | 2059 |
| Bsp1286I | GDGCHC | 3 cut(s) | 954, 1123, 1249 |
| Bsp1407I | TGTACA | 1 cut(s) | 2253 |
| Bsp68I | TCGCGA | 1 cut(s) | 3265 |
| BspACI | CCGC | 7 cut(s) | 13, 482, 981, 1528, 3246, 3358, 3693 |
| BspANI | GGCC | 5 cut(s) | 115, 506, 1625, 2499, 3117 |
| BspCNI | CTCAG | 3 cut(s) | 582, 2517, 3347 |
| BspDI | ATCGAT | 1 cut(s) | 139 |
| BspFNI | CGCG | 4 cut(s) | 13, 739, 3265, 3423 |
| BspHI | TCATGA | 2 cut(s) | 1867, 1908 |
| BspMI | ACCTGC | 1 cut(s) | 2277 |
| BspPI | GGATC | 8 cut(s) | 135, 524, 534, 1572, 3256, 3411, 3523, 3544 |
| BspT107I | GGYRCC | 3 cut(s) | 1118, 1246, 2702 |
| BspTI | CTTAAG | 1 cut(s) | 1972 |
| BsrBI | CCGCTC | 2 cut(s) | 3358, 3695 |
| BsrDI | GCAATG | 6 cut(s) | 53, 136, 299, 732, 1936, 3248 |
| BsrGI | TGTACA | 1 cut(s) | 2253 |
| BsrI | ACTGG | 1 cut(s) | 2472 |
| BssECI | CCNNGG | 4 cut(s) | 3389, 3532, 3611, 3698 |
| BssNAI | GTATAC | 1 cut(s) | 2265 |
| BssNI | GRCGYC | 1 cut(s) | 2703 |
| BssSI | CACGAG | 1 cut(s) | 3383 |
| BssT1I | CCWWGG | 1 cut(s) | 3698 |
| Bst1107I | GTATAC | 1 cut(s) | 2265 |
| Bst2BI | CACGAG | 1 cut(s) | 3383 |
| Bst2UI | CCWGG | 1 cut(s) | 3533 |
| Bst4CI | ACNGT | 5 cut(s) | 343, 1599, 2240, 2635, 3315 |
| Bst6I | CTCTTC | 5 cut(s) | 279, 353, 1566, 2958, 3104 |
| BstACI | GRCGYC | 1 cut(s) | 2703 |
| BstAFI | CTTAAG | 1 cut(s) | 1972 |
| BstAUI | TGTACA | 1 cut(s) | 2253 |
| BstBAI | YACGTR | 2 cut(s) | 2036, 3287 |
| BstC8I | GCNNGC | 2 cut(s) | 508, 3421 |
| BstEII | GGTNACC | 1 cut(s) | 1288 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 969, 3610 |
| BstFNI | CGCG | 4 cut(s) | 13, 739, 3265, 3423 |
| BstH2I | RGCGCY | 1 cut(s) | 2706 |
| BstHHI | GCGC | 3 cut(s) | 739, 2274, 2705 |
| BstMAI | GTCTC | 6 cut(s) | 586, 1072, 1508, 2386, 2475, 2507 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 464, 1490, 1534, 2505, 2572, 2709, 3084 |
| BstNI | CCWGG | 1 cut(s) | 3533 |
| BstNSI | RCATGY | 3 cut(s) | 410, 589, 1162 |
| BstPI | GGTNACC | 1 cut(s) | 1288 |
| BstSCI | CCNGG | 1 cut(s) | 3531 |
| BstSFI | CTRYAG | 1 cut(s) | 2823 |
| BstSLI | GKGCMC | 2 cut(s) | 1123, 1249 |
| BstSNI | TACGTA | 1 cut(s) | 2036 |
| BstUI | CGCG | 4 cut(s) | 13, 739, 3265, 3423 |
| BstV1I | GCAGC | 2 cut(s) | 674, 3585 |
| BstV2I | GAAGAC | 2 cut(s) | 854, 998 |
| BstX2I | RGATCY | 6 cut(s) | 516, 751, 1166, 2473, 3051, 3536 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 179 |
| BstYI | RGATCY | 6 cut(s) | 516, 751, 1166, 2473, 3051, 3536 |
| BstZ17I | GTATAC | 1 cut(s) | 2265 |
| Bsu15I | ATCGAT | 1 cut(s) | 139 |
| BsuRI | GGCC | 5 cut(s) | 115, 506, 1625, 2499, 3117 |
| BsuTUI | ATCGAT | 1 cut(s) | 139 |
| BtrI | CACGTC | 1 cut(s) | 562 |
| BtsI | GCAGTG | 3 cut(s) | 1160, 3108, 3629 |
| BtsIMutI | CAGTG | 7 cut(s) | 339, 579, 1160, 2898, 3108, 3456, 3629 |
| BtuMI | TCGCGA | 1 cut(s) | 3265 |
| BveI | ACCTGC | 1 cut(s) | 2277 |
| Cac8I | GCNNGC | 2 cut(s) | 508, 3421 |
| CciI | TCATGA | 2 cut(s) | 1867, 1908 |
| CfoI | GCGC | 3 cut(s) | 739, 2274, 2705 |
| Cfr13I | GGNCC | 6 cut(s) | 113, 1072, 1141, 1624, 2497, 3116 |
| ClaI | ATCGAT | 1 cut(s) | 139 |
| CseI | GACGC | 1 cut(s) | 3084 |
| Csp6I | GTAC | 7 cut(s) | 2037, 2183, 2254, 2371, 3288, 3316, 3666 |
| CviQI | GTAC | 7 cut(s) | 2037, 2183, 2254, 2371, 3288, 3316, 3666 |
| DinI | GGCGCC | 1 cut(s) | 2704 |
| DraI | TTTAAA | 1 cut(s) | 369 |
| Eam1104I | CTCTTC | 5 cut(s) | 279, 353, 1566, 2958, 3104 |
| EarI | CTCTTC | 5 cut(s) | 279, 353, 1566, 2958, 3104 |
| EciI | GGCGGA | 1 cut(s) | 996 |
| Eco105I | TACGTA | 1 cut(s) | 2036 |
| Eco130I | CCWWGG | 1 cut(s) | 3698 |
| Eco24I | GRGCYC | 1 cut(s) | 954 |
| Eco32I | GATATC | 1 cut(s) | 3301 |
| Eco47I | GGWCC | 2 cut(s) | 1072, 1141 |
| Eco57I | CTGAAG | 2 cut(s) | 377, 3193 |
| Eco88I | CYCGRG | 1 cut(s) | 2059 |
| Eco91I | GGTNACC | 1 cut(s) | 1288 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 969, 3610 |
| EcoO109I | RGGNCCY | 1 cut(s) | 113 |
| EcoO65I | GGTNACC | 1 cut(s) | 1288 |
| EcoRI | GAATTC | 2 cut(s) | 3213, 3293 |
| EcoRII | CCWGG | 1 cut(s) | 3531 |
| EcoRV | GATATC | 1 cut(s) | 3301 |
| EcoT14I | CCWWGG | 1 cut(s) | 3698 |
| EcoT22I | ATGCAT | 2 cut(s) | 136, 1857 |
| EcoT38I | GRGCYC | 1 cut(s) | 954 |
| EgeI | GGCGCC | 1 cut(s) | 2704 |
| EheI | GGCGCC | 1 cut(s) | 2704 |
| ErhI | CCWWGG | 1 cut(s) | 3698 |
| Esp3I | CGTCTC | 1 cut(s) | 2507 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 618, 650, 2564, 2596 |
| FaqI | GGGAC | 1 cut(s) | 2144 |
| FauI | CCCGC | 1 cut(s) | 1521 |
| FauNDI | CATATG | 1 cut(s) | 3219 |
| FbaI | TGATCA | 1 cut(s) | 1905 |
| FblI | GTMKAC | 1 cut(s) | 2264 |
| Fnu4HI | GCNGC | 2 cut(s) | 688, 3599 |
| FriOI | GRGCYC | 1 cut(s) | 954 |
| Fsp4HI | GCNGC | 2 cut(s) | 688, 3599 |
| FspBI | CTAG | 7 cut(s) | 684, 971, 1001, 1010, 1199, 1538, 1659 |
| GlaI | GCGC | 3 cut(s) | 738, 2273, 2704 |
| GluI | GCNGC | 2 cut(s) | 688, 3599 |
| GsuI | CTGGAG | 1 cut(s) | 2387 |
| HaeII | RGCGCY | 1 cut(s) | 2706 |
| HaeIII | GGCC | 5 cut(s) | 115, 506, 1625, 2499, 3117 |
| HapII | CCGG | 1 cut(s) | 2234 |
| HgaI | GACGC | 1 cut(s) | 3084 |
| HhaI | GCGC | 3 cut(s) | 739, 2274, 2705 |
| Hin1I | GRCGYC | 1 cut(s) | 2703 |
| Hin6I | GCGC | 3 cut(s) | 737, 2272, 2703 |
| HinP1I | GCGC | 3 cut(s) | 737, 2272, 2703 |
| HincII | GTYRAC | 2 cut(s) | 346, 2875 |
| HindII | GTYRAC | 2 cut(s) | 346, 2875 |
| HindIII | AAGCTT | 1 cut(s) | 1491 |
| HpaII | CCGG | 1 cut(s) | 2234 |
| Hpy166II | GTNNAC | 9 cut(s) | 346, 391, 559, 2039, 2265, 2875, 3094, 3318, 3497 |
| Hpy8I | GTNNAC | 9 cut(s) | 346, 391, 559, 2039, 2265, 2875, 3094, 3318, 3497 |
| Hpy99I | CGWCG | 3 cut(s) | 729, 866, 3078 |
| HpyCH4III | ACNGT | 5 cut(s) | 343, 1599, 2240, 2635, 3315 |
| HpyCH4IV | ACGT | 5 cut(s) | 561, 1984, 2035, 2888, 3286 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 464, 1490, 1534, 2505, 2572, 2709, 3084 |
| HpySE526I | ACGT | 5 cut(s) | 561, 1984, 2035, 2888, 3286 |
| Hsp92I | GRCGYC | 1 cut(s) | 2703 |
| HspAI | GCGC | 3 cut(s) | 737, 2272, 2703 |
| KasI | GGCGCC | 1 cut(s) | 2702 |
| Ksp22I | TGATCA | 1 cut(s) | 1905 |
| LmnI | GCTCC | 8 cut(s) | 107, 484, 957, 1212, 1579, 3365, 3378, 3700 |
| Lsp1109I | GCAGC | 2 cut(s) | 674, 3585 |
| LweI | GCATC | 3 cut(s) | 406, 469, 619 |
| MaeI | CTAG | 7 cut(s) | 684, 971, 1001, 1010, 1199, 1538, 1659 |
| MaeII | ACGT | 5 cut(s) | 561, 1984, 2035, 2888, 3286 |
| MaeIII | GTNAC | 9 cut(s) | 3, 36, 664, 728, 1288, 1334, 2289, 3257, 3514 |
| MbiI | CCGCTC | 2 cut(s) | 3358, 3695 |
| MfeI | CAATTG | 4 cut(s) | 256, 2020, 2412, 2716 |
| MflI | RGATCY | 6 cut(s) | 516, 751, 1166, 2473, 3051, 3536 |
| MhlI | GDGCHC | 3 cut(s) | 954, 1123, 1249 |
| Mly113I | GGCGCC | 1 cut(s) | 2703 |
| MlyI | GAGTC | 3 cut(s) | 1430, 2084, 3254 |
| MmeI | TCCRAC | 3 cut(s) | 504, 1119, 2940 |
| Mph1103I | ATGCAT | 2 cut(s) | 136, 1857 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1956, 2596 |
| MslI | CAYNNNNRTG | 4 cut(s) | 584, 1221, 2343, 2690 |
| MspCI | CTTAAG | 1 cut(s) | 1972 |
| MspI | CCGG | 1 cut(s) | 2234 |
| MspR9I | CCNGG | 1 cut(s) | 3533 |
| MunI | CAATTG | 4 cut(s) | 256, 2020, 2412, 2716 |
| Mva1269I | GAATGC | 4 cut(s) | 822, 2685, 2695, 2777 |
| MvaI | CCWGG | 1 cut(s) | 3533 |
| MvnI | CGCG | 4 cut(s) | 13, 739, 3265, 3423 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 464, 1490, 1534, 2505, 2572, 2709, 3084 |
| NarI | GGCGCC | 1 cut(s) | 2703 |
| NdeI | CATATG | 1 cut(s) | 3219 |
| NmuCI | GTSAC | 8 cut(s) | 3, 36, 728, 1288, 1334, 2289, 3257, 3514 |
| NruI | TCGCGA | 1 cut(s) | 3265 |
| NsiI | ATGCAT | 2 cut(s) | 136, 1857 |
| NspI | RCATGY | 3 cut(s) | 410, 589, 1162 |
| OliI | CACNNNNGTG | 1 cut(s) | 1221 |
| PaeR7I | CTCGAG | 1 cut(s) | 2059 |
| PagI | TCATGA | 2 cut(s) | 1867, 1908 |
| PciI | ACATGT | 1 cut(s) | 406 |
| PctI | GAATGC | 4 cut(s) | 822, 2685, 2695, 2777 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1956, 2596 |
| PfeI | GAWTC | 7 cut(s) | 262, 2049, 2386, 2675, 3002, 3427, 3436 |
| PflFI | GACNNNGTC | 2 cut(s) | 853, 1145 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1810 |
| PkrI | GCNGC | 2 cut(s) | 689, 3600 |
| PleI | GAGTC | 3 cut(s) | 1429, 2084, 3254 |
| PluTI | GGCGCC | 1 cut(s) | 2706 |
| PpsI | GAGTC | 3 cut(s) | 1429, 2084, 3254 |
| Ppu21I | YACGTR | 2 cut(s) | 2036, 3287 |
| PscI | ACATGT | 1 cut(s) | 406 |
| PshBI | ATTAAT | 2 cut(s) | 1701, 2595 |
| PsiI | TTATAA | 2 cut(s) | 1017, 3626 |
| Psp6I | CCWGG | 1 cut(s) | 3531 |
| PspEI | GGTNACC | 1 cut(s) | 1288 |
| PspGI | CCWGG | 1 cut(s) | 3531 |
| PspPI | GGNCC | 6 cut(s) | 113, 1072, 1141, 1624, 2497, 3116 |
| PspXI | VCTCGAGB | 1 cut(s) | 2059 |
| PsuI | RGATCY | 6 cut(s) | 516, 751, 1166, 2473, 3051, 3536 |
| PsyI | GACNNNGTC | 2 cut(s) | 853, 1145 |
| RruI | TCGCGA | 1 cut(s) | 3265 |
| RsaI | GTAC | 7 cut(s) | 2038, 2184, 2255, 2372, 3289, 3317, 3667 |
| RsaNI | GTAC | 7 cut(s) | 2037, 2183, 2254, 2371, 3288, 3316, 3666 |
| RseI | CAYNNNNRTG | 4 cut(s) | 584, 1221, 2343, 2690 |
| SatI | GCNGC | 2 cut(s) | 688, 3599 |
| Sau96I | GGNCC | 6 cut(s) | 113, 1072, 1141, 1624, 2497, 3116 |
| ScaI | AGTACT | 1 cut(s) | 2372 |
| SchI | GAGTC | 3 cut(s) | 1430, 2084, 3254 |
| ScrFI | CCNGG | 1 cut(s) | 3533 |
| SduI | GDGCHC | 3 cut(s) | 954, 1123, 1249 |
| SfaNI | GCATC | 3 cut(s) | 406, 469, 619 |
| SfcI | CTRYAG | 1 cut(s) | 2823 |
| SfoI | GGCGCC | 1 cut(s) | 2704 |
| Sfr274I | CTCGAG | 1 cut(s) | 2059 |
| SinI | GGWCC | 2 cut(s) | 1072, 1141 |
| SlaI | CTCGAG | 1 cut(s) | 2059 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 584, 1221, 2343, 2690 |
| SmlI | CTYRAG | 5 cut(s) | 1972, 2059, 2492, 2546, 3342 |
| SmoI | CTYRAG | 5 cut(s) | 1972, 2059, 2492, 2546, 3342 |
| SnaBI | TACGTA | 1 cut(s) | 2036 |
| SpeI | ACTAGT | 1 cut(s) | 1009 |
| SsiI | CCGC | 7 cut(s) | 13, 482, 981, 1528, 3246, 3358, 3693 |
| SspDI | GGCGCC | 1 cut(s) | 2702 |
| SspI | AATATT | 3 cut(s) | 1284, 1694, 2514 |
| SspMI | CTAG | 7 cut(s) | 684, 971, 1001, 1010, 1199, 1538, 1659 |
| StyD4I | CCNGG | 1 cut(s) | 3531 |
| StyI | CCWWGG | 1 cut(s) | 3698 |
| TaaI | ACNGT | 5 cut(s) | 343, 1599, 2240, 2635, 3315 |
| TaiI | ACGT | 5 cut(s) | 564, 1987, 2038, 2891, 3289 |
| TaqII | GACCGA | 1 cut(s) | 237 |
| TatI | WGTACW | 2 cut(s) | 2253, 2370 |
| TfiI | GAWTC | 7 cut(s) | 262, 2049, 2386, 2675, 3002, 3427, 3436 |
| TscAI | CASTG | 7 cut(s) | 346, 586, 1160, 2898, 3108, 3456, 3636 |
| TseFI | GTSAC | 8 cut(s) | 3, 36, 728, 1288, 1334, 2289, 3257, 3514 |
| TseI | GCWGC | 2 cut(s) | 687, 3598 |
| Tsp45I | GTSAC | 8 cut(s) | 3, 36, 728, 1288, 1334, 2289, 3257, 3514 |
| TspGWI | ACGGA | 3 cut(s) | 408, 713, 3335 |
| TspRI | CASTG | 7 cut(s) | 346, 586, 1160, 2898, 3108, 3456, 3636 |
| Tth111I | GACNNNGTC | 2 cut(s) | 853, 1145 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1810 |
| Vha464I | CTTAAG | 1 cut(s) | 1972 |
| VpaK11BI | GGWCC | 2 cut(s) | 1072, 1141 |
| VspI | ATTAAT | 2 cut(s) | 1701, 2595 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 969, 3610 |
| XapI | RAATTY | 7 cut(s) | 437, 2029, 2095, 2131, 2861, 3213, 3293 |
| XceI | RCATGY | 3 cut(s) | 410, 589, 1162 |
| XhoI | CTCGAG | 1 cut(s) | 2059 |
| XmiI | GTMKAC | 1 cut(s) | 2264 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1956, 2596 |
| XspI | CTAG | 7 cut(s) | 684, 971, 1001, 1010, 1199, 1538, 1659 |
| ZrmI | AGTACT | 1 cut(s) | 2372 |
| Zsp2I | ATGCAT | 2 cut(s) | 136, 1857 |