Rmu_sc0010008.1_g000003

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010008.1
OG0000018
Physical Location & Seq
Reverse (-)
8229 .. 11066
2838 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010008.1_g000003.1.cds

Sequence Viewer

Length: 2838 bp
atggctgaagcactagttaacgttctccttgagcgtttggctacggccgcccttgacaaggttcgaggagagttcaaactggtctctggggttgaggaagaagtcaagagcctcgcccgcaatctagaagctattcaagctgtgctggaggatgcagagcagaggcaagtgacggaggcaaccgtgagacgttggctgagtgaactgactgaagtttcctacgagatagatgacgtgttggatgagtggatcactcatgttcgaaagagacagatggagaaagaagaaaaacatgctcttgctattgctaagaaggtacgttcttctgcctcctctttcttttctggtagcaaggtcaggcggtctattcatcgtcgtgaaatggctgggaggattaaagagctaaatgaaagattagctttgattgataaggaaaaacacagttttaattttcaaaacaccacaagaggccctgaactacttgtgcggcaaaaaactacttctcttcccaatgttaaaacatttggtcgagataatgaaaaaaacctcatagttagcaagctgctaagtgagagtagtgaaggaaatgaggttcctcttatcattcctcttgtagggatggggggaatggggaaaacaactcttgctcaacttgtttataatgatgaaaatgtcaaatctcattttgacaagagaatatgggtttgtgtctcggacccttttgaagagatcaagattgctcaagctatcattgaaggtctagatagatataataccttaaaaaattcaaatcagttgcaaattcttgtggaacgcatatatgaattgcttgagggtaaaaagttcctccttgttttagatgatgtttggagcccaaactctgatcaatgggaagaattgatcaaacctttacgtaatggtgctcttggtagtagagtactggtgaccactcgaaaggaggaggttgctactttaatgaaagcaacaactcaaatgatccatttgaaggcgttggatgatgcattttgtctgtcattgttctattacaatgcagacatggatgagactagtagtgtgtttaaagagttttacgacattgggttagagattgtgaaaaggtgcaatgggttgcctcttgctgcaaagacactaggaagcctcatgcgcaataagaaaaagattcatgaatggcaagctgttttaaagagcaagacatgggaattgaaagagattcaacaagatgtttttcgaccactactactaagttatcatgatttgactccagcaaccaaacgttgtcttttgtattgtgttacatttccaaaagattgtgtatacaataggaatcatttgattgagttgtggatgtcgcaagaatatttgaatgctaaagaaagtaaagaaaagatagtggttggtcaaaattattttgacgacttggcaatgcggtcattctttcaagatattgatgtagatgatgggaatggaaacatagaatgcaaaattcatgatattgtacatgactttctacaatatttgaccaaaaatgaatgtttgattttggatatttttgagttggatgctagtgagggaagggatgtgtcaaaggataaagttcatcatttgaccttagtgcatgcaaccgagggtggttcttggaaatcttttctccctaattataaaaaattacgtaccttgagagctatagaatcatccaaaaattccattggcccaatatttgagttgacggtagaattgaaatgccttagaacattaagcttgtgtggtcggtgtctcaaagaaattccggagacgataggtggattaatacatttgaggtatcttgatttatcccgtaattggcagttgaaagaattacccagcgccctgggcagcttatacaacctgcaaaccttgcgacttgttgactgcgagggtctcaaaaaagtagatgtgcgaaggctgattaacttgaggcatctttatgttgaacgctgtcgttgtctaaatctaattaaagggattgagaaattaacagatctgcaaaggctagatgagtttcgtgtcccatttattggtggtgatgaaggaaacgagttggaagatctgaaagacttgaaccagcttcaagggagtctagtgattcagattgagggaaatcaaaatatggcggagaatgcagcaattatggtgaataaggttcacctcctgcgattgagactaatgttctggatgggtgatgaagtaaaggatagagaaattatgaatggcttagagccgcatccaagtttggaatctttatccatcagtcagtatagaggcgatgccttctcccattggttgtcgtattcacacagcttgagagtgctcacccttgattcctgctggaaatgtggggttttgcctcctttagggaaactggcgtcccttgaatcattagaaatttggggtttctctggagtctcaaaggtaggagttgagtttttgggaatagatgaccggcaaacctcgtcgtcttccattttcatatcattccccaagctcaaacaactcaccatcgaattaatggagtcatgggaagggtgggtaggagtggaaaataataatattacaatcatgccatgcctctctcagttgacaatcgatagatgcgagaagctaaattcactgccggacttcctgtggaagacaccactacagaaattgcacatcaagagatctccaactctccaagtcctttacagacaaggaataggcctgtgggccaagatttctcacatcccaagcatcaagatagaagccatatatcacatcccaagcatcaagatagacgcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

945

Amino Acids

108.25

Weight (kDa)

6.49

Isoelectric Point (pI)

42.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 660, 1680
Acc16I TGCGCA 1 cut(s) 1166
Acc36I ACCTGC 1 cut(s) 1914
AccB7I CCANNNNNTGG 1 cut(s) 2075
AccI GTMKAC 1 cut(s) 1335
AccIII TCCGGA 1 cut(s) 1807
AciI CCGC 7 cut(s) 48, 118, 361, 487, 1447, 2171, 2279
AclI AACGTT 2 cut(s) 21, 1294
AclWI GGATC 2 cut(s) 257, 991
AcoI YGGCCR 1 cut(s) 45
AcsI RAATTY 7 cut(s) 784, 801, 1503, 1720, 1803, 2442, 2662
AcuI CTGAAG 2 cut(s) 27, 231
AcyI GRCGYC 2 cut(s) 2423, 2832
AfaI GTAC 4 cut(s) 318, 939, 1518, 1693
AfiI CCNNNNNNNGG 6 cut(s) 58, 614, 1006, 1860, 2075, 2411
AflIII ACRYGT 1 cut(s) 234
AhlI ACTAGT 2 cut(s) 13, 1067
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 1 cut(s) 1887
AloI GAACNNNNNNTCC 2 cut(s) 576, 608
Alw21I GWGCWC 2 cut(s) 925, 2370
AlwI GGATC 2 cut(s) 257, 991
Aor13HI TCCGGA 1 cut(s) 1807
AoxI GGCC 5 cut(s) 45, 469, 1729, 2755, 2763
ApeKI GCWGC 4 cut(s) 562, 1139, 1893, 2180
ApoI RAATTY 7 cut(s) 784, 801, 1503, 1720, 1803, 2442, 2662
AseI ATTAAT 2 cut(s) 1826, 2564
Asp700I GAANNNNTTC 1 cut(s) 132
AspLEI GCGC 2 cut(s) 1167, 1886
AspS9I GGNCC 4 cut(s) 470, 715, 1730, 2763
AsuHPI GGTGA 7 cut(s) 955, 2093, 2195, 2203, 2249, 2362, 2545
AsuII TTCGAA 1 cut(s) 262
AvaII GGWCC 1 cut(s) 715
BanII GRGCYC 1 cut(s) 875
BbsI GAAGAC 2 cut(s) 2508, 2693
Bbv12I GWGCWC 2 cut(s) 925, 2370
BbvI GCAGC 4 cut(s) 549, 1126, 1905, 2192
BccI CCATC 6 cut(s) 268, 613, 1472, 2227, 2312, 2564
BceAI ACGGC 1 cut(s) 60
BciT130I CCWGG 1 cut(s) 1889
BclI TGATCA 2 cut(s) 883, 900
BcuI ACTAGT 2 cut(s) 13, 1067
BfaI CTAG 8 cut(s) 14, 125, 761, 1068, 1151, 1584, 2051, 2138
BfmI CTRYAG 2 cut(s) 1704, 2696
BfoI RGCGCY 1 cut(s) 1887
BfuAI ACCTGC 1 cut(s) 1914
BglII AGATCT 3 cut(s) 2038, 2104, 2717
BisI GCNGC 7 cut(s) 48, 488, 563, 1140, 1894, 2181, 2279
BlsI GCNGC 7 cut(s) 49, 489, 564, 1141, 1895, 2182, 2280
BmcAI AGTACT 1 cut(s) 939
Bme1390I CCNGG 1 cut(s) 1889
Bme18I GGWCC 1 cut(s) 715
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 4 cut(s) 470, 715, 1730, 2763
BmiI GGNNCC 3 cut(s) 594, 717, 872
BmrFI CCNGG 1 cut(s) 1889
BmsI GCATC 9 cut(s) 142, 1009, 1570, 1987, 2290, 2314, 2639, 2796, 2829
BpiI GAAGAC 2 cut(s) 2508, 2693
BpmI CTGGAG 3 cut(s) 167, 1266, 2478
Bpu14I TTCGAA 1 cut(s) 262
BpuEI CTTGAG 6 cut(s) 50, 726, 851, 1717, 1993, 2380
Bsa29I ATCGAT 1 cut(s) 2643
BsaAI YACGTR 2 cut(s) 914, 1691
BsaHI GRCGYC 2 cut(s) 2423, 2832
BsaI GGTCTC 2 cut(s) 88, 1943
BsaJI CCNNGG 3 cut(s) 1644, 1887, 1888
BsaWI WCCGGW 1 cut(s) 1807
Bsc4I CCNNNNNNNGG 6 cut(s) 58, 614, 1006, 1860, 2075, 2411
Bse118I RCCGGY 1 cut(s) 2499
Bse1I ACTGG 3 cut(s) 84, 945, 2424
Bse3DI GCAATG 2 cut(s) 1129, 1449
BseAI TCCGGA 1 cut(s) 1807
BseBI CCWGG 1 cut(s) 1889
BseCI ATCGAT 1 cut(s) 2643
BseDI CCNNGG 3 cut(s) 1644, 1887, 1888
BseLI CCNNNNNNNGG 6 cut(s) 58, 614, 1006, 1860, 2075, 2411
BseMI GCAATG 2 cut(s) 1129, 1449
BseMII CTCAG 2 cut(s) 188, 2645
BseNI ACTGG 3 cut(s) 84, 945, 2424
BseRI GAGGAG 3 cut(s) 81, 322, 974
BseX3I CGGCCG 1 cut(s) 45
BseXI GCAGC 4 cut(s) 549, 1126, 1905, 2192
BseYI CCCAGC 2 cut(s) 386, 1880
Bsh1285I CGRYCG 1 cut(s) 48
BshFI GGCC 5 cut(s) 47, 471, 1731, 2757, 2765
BshVI ATCGAT 1 cut(s) 2643
BsiEI CGRYCG 1 cut(s) 48
BsiHKAI GWGCWC 2 cut(s) 925, 2370
BsiSI CCGG 3 cut(s) 1808, 2500, 2672
BslFI GGGAC 2 cut(s) 2051, 2410
BslI CCNNNNNNNGG 6 cut(s) 58, 614, 1006, 1860, 2075, 2411
BsmBI CGTCTC 2 cut(s) 181, 1805
BsmFI GGGAC 2 cut(s) 2051, 2410
BsmI GAATGC 3 cut(s) 1390, 1502, 2182
BsnI GGCC 5 cut(s) 47, 471, 1731, 2757, 2765
Bso31I GGTCTC 2 cut(s) 88, 1943
Bsp119I TTCGAA 1 cut(s) 262
Bsp1286I GDGCHC 3 cut(s) 875, 925, 2370
Bsp13I TCCGGA 1 cut(s) 1807
Bsp1407I TGTACA 1 cut(s) 1516
Bsp143I GATC 8 cut(s) 249, 729, 883, 900, 996, 2038, 2104, 2717
BspACI CCGC 7 cut(s) 48, 118, 361, 487, 1447, 2171, 2279
BspANI GGCC 5 cut(s) 47, 471, 1731, 2757, 2765
BspCNI CTCAG 2 cut(s) 189, 2644
BspDI ATCGAT 1 cut(s) 2643
BspEI TCCGGA 1 cut(s) 1807
BspHI TCATGA 3 cut(s) 1183, 1270, 1507
BspLI GGNNCC 3 cut(s) 594, 717, 872
BspMI ACCTGC 1 cut(s) 1914
BspPI GGATC 2 cut(s) 257, 991
BspT104I TTCGAA 1 cut(s) 262
BspTNI GGTCTC 2 cut(s) 88, 1943
BsrDI GCAATG 2 cut(s) 1129, 1449
BsrFI RCCGGY 1 cut(s) 2499
BsrGI TGTACA 1 cut(s) 1516
BsrI ACTGG 3 cut(s) 84, 945, 2424
BssAI RCCGGY 1 cut(s) 2499
BssECI CCNNGG 3 cut(s) 1644, 1887, 1888
BssMI GATC 8 cut(s) 249, 729, 883, 900, 996, 2038, 2104, 2717
BssNAI GTATAC 1 cut(s) 1336
BssNI GRCGYC 2 cut(s) 2423, 2832
Bst1107I GTATAC 1 cut(s) 1336
Bst2UI CCWGG 1 cut(s) 1889
Bst4CI ACNGT 3 cut(s) 184, 443, 1750
Bst6I CTCTTC 2 cut(s) 510, 720
BstACI GRCGYC 2 cut(s) 2423, 2832
BstAPI GCANNNNNTGC 1 cut(s) 1915
BstAUI TGTACA 1 cut(s) 1516
BstBAI YACGTR 2 cut(s) 914, 1691
BstBI TTCGAA 1 cut(s) 262
BstC8I GCNNGC 4 cut(s) 118, 560, 1194, 1638
BstDEI CTNAG 8 cut(s) 197, 309, 566, 1262, 1630, 1766, 2272, 2631
BstEII GGTNACC 1 cut(s) 943
BstENI CCTNNNNNAGG 3 cut(s) 56, 612, 2409
BstH2I RGCGCY 1 cut(s) 1887
BstHHI GCGC 2 cut(s) 1167, 1886
BstKTI GATC 8 cut(s) 252, 732, 886, 903, 999, 2041, 2107, 2720
BstMBI GATC 8 cut(s) 249, 729, 883, 900, 996, 2038, 2104, 2717
BstMCI CGRYCG 1 cut(s) 48
BstMWI GCNNNNNNNGC 7 cut(s) 47, 117, 137, 1164, 1890, 1915, 2177
BstNI CCWGG 1 cut(s) 1889
BstNSI RCATGY 2 cut(s) 296, 1640
BstPI GGTNACC 1 cut(s) 943
BstSCI CCNGG 1 cut(s) 1887
BstSFI CTRYAG 2 cut(s) 1704, 2696
BstSNI TACGTA 2 cut(s) 914, 1691
BstV1I GCAGC 4 cut(s) 549, 1126, 1905, 2192
BstV2I GAAGAC 2 cut(s) 2508, 2693
BstX2I RGATCY 3 cut(s) 2038, 2104, 2717
BstXI CCANNNNNNTGG 1 cut(s) 1888
BstYI RGATCY 3 cut(s) 2038, 2104, 2717
BstZ17I GTATAC 1 cut(s) 1336
BstZI CGGCCG 1 cut(s) 45
Bsu15I ATCGAT 1 cut(s) 2643
BsuRI GGCC 5 cut(s) 47, 471, 1731, 2757, 2765
BsuTUI ATCGAT 1 cut(s) 2643
BtgZI GCGATG 1 cut(s) 2337
BtrI CACGTC 1 cut(s) 235
BtsI GCAGTG 1 cut(s) 2666
BtsIMutI CAGTG 1 cut(s) 2666
BveI ACCTGC 1 cut(s) 1914
Cac8I GCNNGC 4 cut(s) 118, 560, 1194, 1638
CciI TCATGA 3 cut(s) 1183, 1270, 1507
CfoI GCGC 2 cut(s) 1167, 1886
Cfr10I RCCGGY 1 cut(s) 2499
Cfr13I GGNCC 4 cut(s) 470, 715, 1730, 2763
ClaI ATCGAT 1 cut(s) 2643
CseI GACGC 1 cut(s) 2412
Csp6I GTAC 4 cut(s) 317, 938, 1517, 1692
CviQI GTAC 4 cut(s) 317, 938, 1517, 1692
DdeI CTNAG 8 cut(s) 197, 309, 566, 1262, 1630, 1766, 2272, 2631
DpnI GATC 8 cut(s) 251, 731, 885, 902, 998, 2040, 2106, 2719
DpnII GATC 8 cut(s) 249, 729, 883, 900, 996, 2038, 2104, 2717
DraI TTTAAA 2 cut(s) 1081, 1203
EaeI YGGCCR 1 cut(s) 45
EagI CGGCCG 1 cut(s) 45
Eam1104I CTCTTC 2 cut(s) 510, 720
EarI CTCTTC 2 cut(s) 510, 720
EciI GGCGGA 1 cut(s) 2186
EclXI CGGCCG 1 cut(s) 45
Eco105I TACGTA 2 cut(s) 914, 1691
Eco147I AGGCCT 1 cut(s) 2757
Eco24I GRGCYC 1 cut(s) 875
Eco31I GGTCTC 2 cut(s) 88, 1943
Eco47I GGWCC 1 cut(s) 715
Eco52I CGGCCG 1 cut(s) 45
Eco57I CTGAAG 2 cut(s) 27, 231
Eco91I GGTNACC 1 cut(s) 943
EcoNI CCTNNNNNAGG 3 cut(s) 56, 612, 2409
EcoO109I RGGNCCY 1 cut(s) 470
EcoO65I GGTNACC 1 cut(s) 943
EcoRII CCWGG 1 cut(s) 1887
EcoT22I ATGCAT 1 cut(s) 1024
EcoT38I GRGCYC 1 cut(s) 875
Esp3I CGTCTC 2 cut(s) 181, 1805
FalI AAGNNNNNCTT 2 cut(s) 403, 435
FaqI GGGAC 2 cut(s) 2051, 2410
FauI CCCGC 1 cut(s) 125
FbaI TGATCA 2 cut(s) 883, 900
FblI GTMKAC 1 cut(s) 1335
Fnu4HI GCNGC 7 cut(s) 48, 488, 563, 1140, 1894, 2181, 2279
FriOI GRGCYC 1 cut(s) 875
Fsp4HI GCNGC 7 cut(s) 48, 488, 563, 1140, 1894, 2181, 2279
FspBI CTAG 8 cut(s) 14, 125, 761, 1068, 1151, 1584, 2051, 2138
FspI TGCGCA 1 cut(s) 1166
GlaI GCGC 2 cut(s) 1166, 1885
GluI GCNGC 7 cut(s) 48, 488, 563, 1140, 1894, 2181, 2279
GsaI CCCAGC 2 cut(s) 390, 1884
GsuI CTGGAG 3 cut(s) 167, 1266, 2478
HaeII RGCGCY 1 cut(s) 1887
HaeIII GGCC 5 cut(s) 47, 471, 1731, 2757, 2765
HapII CCGG 3 cut(s) 1808, 2500, 2672
HgaI GACGC 1 cut(s) 2412
HhaI GCGC 2 cut(s) 1167, 1886
Hin1I GRCGYC 2 cut(s) 2423, 2832
Hin6I GCGC 2 cut(s) 1165, 1884
HinP1I GCGC 2 cut(s) 1165, 1884
HincII GTYRAC 4 cut(s) 19, 1746, 1927, 2637
HindII GTYRAC 4 cut(s) 19, 1746, 1927, 2637
HindIII AAGCTT 1 cut(s) 1777
HpaI GTTAAC 1 cut(s) 19
HpaII CCGG 3 cut(s) 1808, 2500, 2672
HphI GGTGA 7 cut(s) 955, 2093, 2195, 2203, 2249, 2362, 2545
Hpy166II GTNNAC 7 cut(s) 19, 203, 1336, 1746, 1927, 2203, 2637
Hpy188I TCNGA 4 cut(s) 715, 883, 2109, 2148
Hpy8I GTNNAC 7 cut(s) 19, 203, 1336, 1746, 1927, 2203, 2637
Hpy99I CGWCG 2 cut(s) 378, 2515
HpyAV CCTTC 9 cut(s) 307, 575, 749, 1000, 1587, 1953, 2081, 2338, 2573
HpyCH4III ACNGT 3 cut(s) 184, 443, 1750
HpyCH4IV ACGT 7 cut(s) 21, 190, 234, 319, 913, 1294, 1690
HpyF10VI GCNNNNNNNGC 7 cut(s) 47, 117, 137, 1164, 1890, 1915, 2177
HpyF3I CTNAG 8 cut(s) 197, 309, 566, 1262, 1630, 1766, 2272, 2631
HpySE526I ACGT 7 cut(s) 21, 190, 234, 319, 913, 1294, 1690
Hsp92I GRCGYC 2 cut(s) 2423, 2832
HspAI GCGC 2 cut(s) 1165, 1884
Kpn2I TCCGGA 1 cut(s) 1807
Ksp22I TGATCA 2 cut(s) 883, 900
KspAI GTTAAC 1 cut(s) 19
Kzo9I GATC 8 cut(s) 249, 729, 883, 900, 996, 2038, 2104, 2717
LmnI GCTCC 1 cut(s) 870
Lsp1109I GCAGC 4 cut(s) 549, 1126, 1905, 2192
LweI GCATC 9 cut(s) 142, 1009, 1570, 1987, 2290, 2314, 2639, 2796, 2829
MaeI CTAG 8 cut(s) 14, 125, 761, 1068, 1151, 1584, 2051, 2138
MaeII ACGT 7 cut(s) 21, 190, 234, 319, 913, 1294, 1690
MaeIII GTNAC 3 cut(s) 169, 943, 1312
MalI GATC 8 cut(s) 251, 731, 885, 902, 998, 2040, 2106, 2719
MboI GATC 8 cut(s) 249, 729, 883, 900, 996, 2038, 2104, 2717
MboII GAAGA 9 cut(s) 110, 296, 315, 497, 737, 905, 2114, 2508, 2698
MflI RGATCY 3 cut(s) 2038, 2104, 2717
MhlI GDGCHC 3 cut(s) 875, 925, 2370
MlyI GAGTC 4 cut(s) 1273, 2143, 2469, 2579
MmeI TCCRAC 5 cut(s) 219, 993, 1557, 2079, 2747
Mph1103I ATGCAT 1 cut(s) 1024
MroI TCCGGA 1 cut(s) 1807
MroXI GAANNNNTTC 1 cut(s) 132
MslI CAYNNNNRTG 2 cut(s) 375, 1983
MspI CCGG 3 cut(s) 1808, 2500, 2672
MspR9I CCNGG 1 cut(s) 1889
Mva1269I GAATGC 3 cut(s) 1390, 1502, 2182
MvaI CCWGG 1 cut(s) 1889
MwoI GCNNNNNNNGC 7 cut(s) 47, 117, 137, 1164, 1890, 1915, 2177
NdeII GATC 8 cut(s) 249, 729, 883, 900, 996, 2038, 2104, 2717
NlaIV GGNNCC 3 cut(s) 594, 717, 872
NmuCI GTSAC 2 cut(s) 169, 943
NsbI TGCGCA 1 cut(s) 1166
NsiI ATGCAT 1 cut(s) 1024
NspI RCATGY 2 cut(s) 296, 1640
NspV TTCGAA 1 cut(s) 262
PaeI GCATGC 1 cut(s) 1640
PagI TCATGA 3 cut(s) 1183, 1270, 1507
PasI CCCWGGG 1 cut(s) 1888
PceI AGGCCT 1 cut(s) 2757
PcsI WCGNNNNNNNCGW 1 cut(s) 2649
PctI GAATGC 3 cut(s) 1390, 1502, 2182
PdmI GAANNNNTTC 1 cut(s) 132
PfeI GAWTC 8 cut(s) 1180, 1231, 1345, 1709, 2143, 2294, 2378, 2432
PflMI CCANNNNNTGG 1 cut(s) 2075
PkrI GCNGC 7 cut(s) 49, 489, 564, 1141, 1895, 2182, 2280
PleI GAGTC 4 cut(s) 1273, 2142, 2468, 2578
PpsI GAGTC 4 cut(s) 1273, 2142, 2468, 2578
Ppu21I YACGTR 2 cut(s) 914, 1691
PshBI ATTAAT 2 cut(s) 1826, 2564
PsiI TTATAA 2 cut(s) 660, 1680
Psp1406I AACGTT 2 cut(s) 21, 1294
Psp6I CCWGG 1 cut(s) 1887
PspEI GGTNACC 1 cut(s) 943
PspFI CCCAGC 2 cut(s) 386, 1880
PspGI CCWGG 1 cut(s) 1887
PspN4I GGNNCC 3 cut(s) 594, 717, 872
PspPI GGNCC 4 cut(s) 470, 715, 1730, 2763
PsuI RGATCY 3 cut(s) 2038, 2104, 2717
RsaI GTAC 4 cut(s) 318, 939, 1518, 1693
RsaNI GTAC 4 cut(s) 317, 938, 1517, 1692
RseI CAYNNNNRTG 2 cut(s) 375, 1983
SatI GCNGC 7 cut(s) 48, 488, 563, 1140, 1894, 2181, 2279
Sau3AI GATC 8 cut(s) 249, 729, 883, 900, 996, 2038, 2104, 2717
Sau96I GGNCC 4 cut(s) 470, 715, 1730, 2763
ScaI AGTACT 1 cut(s) 939
SchI GAGTC 4 cut(s) 1273, 2143, 2469, 2579
ScrFI CCNGG 1 cut(s) 1889
SduI GDGCHC 3 cut(s) 875, 925, 2370
SfaNI GCATC 9 cut(s) 142, 1009, 1570, 1987, 2290, 2314, 2639, 2796, 2829
SfcI CTRYAG 2 cut(s) 1704, 2696
SfuI TTCGAA 1 cut(s) 262
SinI GGWCC 1 cut(s) 715
SmiMI CAYNNNNRTG 2 cut(s) 375, 1983
SmlI CTYRAG 6 cut(s) 29, 741, 830, 1696, 1972, 2359
SmoI CTYRAG 6 cut(s) 29, 741, 830, 1696, 1972, 2359
SnaBI TACGTA 2 cut(s) 914, 1691
SpeI ACTAGT 2 cut(s) 13, 1067
SphI GCATGC 1 cut(s) 1640
SseBI AGGCCT 1 cut(s) 2757
SsiI CCGC 7 cut(s) 48, 118, 361, 487, 1447, 2171, 2279
SspI AATATT 4 cut(s) 1379, 1535, 1737, 2608
SspMI CTAG 8 cut(s) 14, 125, 761, 1068, 1151, 1584, 2051, 2138
StuI AGGCCT 1 cut(s) 2757
StyD4I CCNGG 1 cut(s) 1887
TaaI ACNGT 3 cut(s) 184, 443, 1750
TaiI ACGT 7 cut(s) 24, 193, 237, 322, 916, 1297, 1693
TaqI TCGA 7 cut(s) 64, 262, 529, 952, 1249, 2559, 2643
TatI WGTACW 2 cut(s) 937, 1516
TauI GCSGC 3 cut(s) 50, 490, 2281
TfiI GAWTC 8 cut(s) 1180, 1231, 1345, 1709, 2143, 2294, 2378, 2432
TscAI CASTG 1 cut(s) 2673
TseFI GTSAC 2 cut(s) 169, 943
TseI GCWGC 4 cut(s) 562, 1139, 1893, 2180
Tsp45I GTSAC 2 cut(s) 169, 943
TspGWI ACGGA 1 cut(s) 188
TspRI CASTG 1 cut(s) 2673
Van91I CCANNNNNTGG 1 cut(s) 2075
VpaK11BI GGWCC 1 cut(s) 715
VspI ATTAAT 2 cut(s) 1826, 2564
XagI CCTNNNNNAGG 3 cut(s) 56, 612, 2409
XapI RAATTY 7 cut(s) 784, 801, 1503, 1720, 1803, 2442, 2662
XbaI TCTAGA 2 cut(s) 124, 760
XceI RCATGY 2 cut(s) 296, 1640
XcmI CCANNNNNNNNNTGG 1 cut(s) 2563
XmiI GTMKAC 1 cut(s) 1335
XmnI GAANNNNTTC 1 cut(s) 132
XspI CTAG 8 cut(s) 14, 125, 761, 1068, 1151, 1584, 2051, 2138
ZrmI AGTACT 1 cut(s) 939
Zsp2I ATGCAT 1 cut(s) 1024
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.