MD03G1067800.v1.1

disease resistance protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Reverse (-)
5382615 .. 5385063
2449 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1067800.v1.1.491

Sequence Viewer

Length: 2340 bp
ATGGCTGATGCGATCGTTTCCGTGCTGCTAGAGCGGTTGGCTTCAGCAACTTTTCATTACATAGAAGATAAGGTGAAAAACGTTTTGGACGTTAAGAAATACGTTCAAGAATTCACTAGCAATCTCAAAGCTGTTCAAGCTGTGCTTCAGGACGCTGAGCGAAGGCAAGTGGAGGACGAAAGCGTGAGAAACTGGTTGGATAACCTCAAGGAAATATCATACCAGATGGGGGATGTGCTGGATGAGTGGAACTATGAGATTCTGAGGCAACAGGTTGAGAAGCAAGAAAGAGAAGGTGCAGCTGCTCTTGTTCCTGAAAAGAAGGTCAGATTTTCTGTTTCCTCTGGTTGCTTTTGTTTTGGCCTAGTCAGTCAGGTCTTTCTTCATGATGACATTGCTGCTAGGATAAAAGAGCTGAATGAGAGTTTAACTTTGATTTATAAGCAAAGAAAAATGTATGGGTTTCACATAGAGAAAGGCACTCAACGACTTGAACAACGGATAACTTCGTCTTTCGTCGATGTATCTAACATCTTTGGACGAGAAAACGAAAAAGATGTTTTGATAACAAAGTTGTTGACTGATGGTAGTGAACAAGGGAGGGGGACCTTTATCATCCCTATTGTAGGGATGGGAGGAATGGGCAAAACAACTTTGGCCCAACTAGTATATAATGATCCCAAAGTTAAAACCCATTTTGAAAAGAGAATATGGGTTTGTGTGTCAGATCCTTTCGAGGAGATTAAGATTGCCACAGCTATTATTGGTAATGACCCCCCAAGTTTAAATGAGTTGGACGATGTCTTGCGGCGTGTGTCTAAATTCATTGAGGGCAAAAGGTTTCTCCTTGTCCTTGATGATGTGTGGACCCAAGACCGTGAAAAGTGGGAGCAATTAGAGGTAGCATTGATCCAAAGTGGTGCTAAAGGCAGTAGAATATTGGTGACAACAAGAAAACATGAGGTTGTTGATATGATGAGAGCAACAAGTCACATGATGGGAGAATTGAGTGAACAGTCTTGTTTGTCAATCTTCAATCACATGGCCTTTTATGATAGGGAAGTAGATGAATCCAAGAAGTTTGAAGATATTAGTCATGAAATTGTAAAGAAGTGTAAGGGTTTGCCTCTTGCTGCAAAGACTTTAGGTAGTCTGATGCACAACAAGAGAACACGGAGAGAATGGAAAGATGTTTTGAGCAGTAAAATATGGGATCTAGAAGATGTCGAGCAAAAAGTTTTCCAACCACTGTTACTAAGTTATTATGATTTGACCCCAACAGTTAAATGTTGCCTATTATATTGTGTTGTTTTTCCTAAAGACTATGAGTTTGACAGAGATTGTTTGATTAATCTCTGGATGGCACAAGATTACCTTAATTCGAAAGGGAATAAAGATAAGGGAATGATTGGTCAAACATATTTTGATAACTTAGTAGCACATTCTTTTTTTCAAGATTTTGAGAAAGATCGTGGTAGTGGTAAAGTCGTAAGTTGCAAAATGCATGATATTGTGCATGACTTTCTGCAATTTCTCACCAAGAATGAATGCTTGATTATTGAGGGTGAGGGTGCCACCAATGAAATAGCAGTAGTGGGTGATAAGGTTCGCCATTTGACCTTAGCTTCAGTACCCGAGGGTCCACTTTCACCAGCTATCTCATTTTCCAATTGCAAAAATCTACGCACACTCGCAACTTTTAAATCAAAAATAACTGCAATAAGCTCAGATTTTATTTTGCAATTGAAATGTCTTAGGACATTAATTTTGAGTGGTGACTTGGTGTATGTTTGGAAGAAATTACCGGATGCTATTTGTGAATTGTACAATTTGTGTACCTTGCGCCTTTTTTGTTGTGGCTCACTCGAAGAACTACCTGATAACATGGGAAAATTGATTAGCTTAAAACATCTTTATATTGAAGGATGCTGTTTTCTCGAGTACTTACCAAAAGGGATTGGGAGGTTAACAAGTTTGCAGACACTGGATACGTTTGTTGTGTGTTGCGGTGACAAGGAAGAAGCATTACAATTTGAAGATCTGAGAACGTTGAAACTTCAGGGTAGTCTCGTAGTAAAGGTTTCTGGGGATGTAAAAGATGTGAGCGAGGTTGAGAAAGCTCAATTGTGGGATCAAAAGAAACTTTTTCATCTCGGAATAAATTGTAGAGATATGCACTACAGGCAGACAAAAAGCAGTGTAGAAATATTGAATGTCTTACGACCGCACAAAGATTTGGAAGCTTTGGACATTCTTGCGCATGCTGGGACCGCCTGGCCAATTTGGATGGCGTCGTTAAACCAGTTGAGAATCGTTACCATTGTATGGTGGGAAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

780

Amino Acids

89.13

Weight (kDa)

5.93

Isoelectric Point (pI)

42.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 96 2e-21 Rx N-terminal domain
NB-ARC PF00931 182 - 351 3.3e-32 NB-ARC domain
WHD_DRP PF23559 437 - 508 8.1e-24 Disease resistance protein Winged helix domain
LRR_14 PF23598 552 - 774 3e-16 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 679 - 776 2.8e-13 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 441
Acc16I TGCGCA 1 cut(s) 2259
AccB1I GGYRCC 1 cut(s) 1571
AccB7I CCANNNNNTGG 1 cut(s) 2325
AccBSI CCGCTC 1 cut(s) 34
AciI CCGC 5 cut(s) 34, 808, 2007, 2225, 2271
AclI AACGTT 2 cut(s) 81, 2048
AclWI GGATC 5 cut(s) 671, 722, 904, 1221, 2139
AcoI YGGCCR 1 cut(s) 2276
AcsI RAATTY 2 cut(s) 110, 821
AcuI CTGAAG 4 cut(s) 27, 131, 1611, 2042
AcyI GRCGYC 1 cut(s) 2291
AfaI GTAC 4 cut(s) 1632, 1826, 1837, 1943
AfiI CCNNNNNNNGG 3 cut(s) 229, 626, 2325
AhlI ACTAGT 1 cut(s) 664
AjnI CCWGG 1 cut(s) 2273
AjuI GAANNNNNNNTTGG 2 cut(s) 68, 100
Alw26I GTCTC 1 cut(s) 2072
AlwI GGATC 5 cut(s) 671, 722, 904, 1221, 2139
AlwNI CAGNNNCTG 1 cut(s) 1984
Ama87I CYCGRG 2 cut(s) 1634, 1937
AoxI GGCC 4 cut(s) 361, 657, 1044, 2276
ApeKI GCWGC 5 cut(s) 25, 299, 302, 398, 1133
ApoI RAATTY 2 cut(s) 110, 821
ArsI GACNNNNNNTTYG 4 cut(s) 1313, 1345, 1750, 1782
AseI ATTAAT 2 cut(s) 1350, 1763
AspLEI GCGC 2 cut(s) 1845, 2260
AspS9I GGNCC 5 cut(s) 606, 658, 867, 1640, 2268
AsuHPI GGTGA 8 cut(s) 85, 955, 1528, 1577, 1610, 1641, 1787, 2021
AsuII TTCGAA 1 cut(s) 1382
AvaI CYCGRG 2 cut(s) 1634, 1937
AvaII GGWCC 4 cut(s) 606, 867, 1640, 2268
BaeI ACNNNNGTAYC 2 cut(s) 1980, 2013
BalI TGGCCA 1 cut(s) 2278
BanI GGYRCC 1 cut(s) 1571
BarI GAAGNNNNNNTAC 2 cut(s) 2010, 2042
BbvI GCAGC 5 cut(s) 12, 289, 311, 385, 1120
BccI CCATC 6 cut(s) 220, 578, 625, 991, 1354, 2281
BciT130I CCWGG 1 cut(s) 2275
BciVI GTATCC 1 cut(s) 1981
BcoDI GTCTC 1 cut(s) 2072
BcuI ACTAGT 1 cut(s) 664
BfaI CTAG 6 cut(s) 29, 117, 365, 402, 665, 1217
BfmI CTRYAG 1 cut(s) 2179
BfuI GTATCC 1 cut(s) 1981
BglII AGATCT 1 cut(s) 2038
BisI GCNGC 6 cut(s) 26, 300, 303, 399, 809, 1134
BlpI GCTNAGC 1 cut(s) 156
BlsI GCNGC 6 cut(s) 27, 301, 304, 400, 810, 1135
BmcAI AGTACT 1 cut(s) 1943
Bme1390I CCNGG 1 cut(s) 2275
Bme18I GGWCC 4 cut(s) 606, 867, 1640, 2268
BmeT110I CYCGRG 2 cut(s) 1634, 1937
BmgT120I GGNCC 5 cut(s) 606, 658, 867, 1640, 2268
BmiI GGNNCC 5 cut(s) 607, 869, 1573, 1641, 2269
BmrFI CCNGG 1 cut(s) 2275
BmsI GCATC 3 cut(s) 1146, 1798, 1916
Bpu10I CCTNAGC 1 cut(s) 1621
Bpu1102I GCTNAGC 1 cut(s) 156
Bpu14I TTCGAA 1 cut(s) 1382
BpuEI CTTGAG 1 cut(s) 191
BsaHI GRCGYC 1 cut(s) 2291
BsaJI CCNNGG 1 cut(s) 1635
BsaWI WCCGGW 1 cut(s) 1804
Bsc4I CCNNNNNNNGG 3 cut(s) 229, 626, 2325
Bse1I ACTGG 3 cut(s) 197, 1989, 2302
Bse3DI GCAATG 1 cut(s) 393
BseBI CCWGG 1 cut(s) 2275
BseDI CCNNGG 1 cut(s) 1635
BseGI GGATG 9 cut(s) 238, 247, 615, 636, 1365, 1813, 1931, 2095, 2292
BseLI CCNNNNNNNGG 3 cut(s) 229, 626, 2325
BseMI GCAATG 1 cut(s) 393
BseMII CTCAG 4 cut(s) 147, 254, 1740, 2033
BseNI ACTGG 3 cut(s) 197, 1989, 2302
BseRI GAGGAG 1 cut(s) 752
BseXI GCAGC 5 cut(s) 12, 289, 311, 385, 1120
BseYI CCCAGC 1 cut(s) 2264
BsgI GTGCAG 1 cut(s) 318
Bsh1285I CGRYCG 2 cut(s) 15, 2225
BshFI GGCC 4 cut(s) 363, 659, 1046, 2278
BshNI GGYRCC 1 cut(s) 1571
BsiEI CGRYCG 2 cut(s) 15, 2225
BsiHKCI CYCGRG 2 cut(s) 1634, 1937
BsiSI CCGG 1 cut(s) 1805
BslFI GGGAC 2 cut(s) 619, 2281
BslI CCNNNNNNNGG 3 cut(s) 229, 626, 2325
BsmAI GTCTC 1 cut(s) 2072
BsmFI GGGAC 2 cut(s) 619, 2281
BsmI GAATGC 1 cut(s) 1553
BsnI GGCC 4 cut(s) 363, 659, 1046, 2278
BsoBI CYCGRG 2 cut(s) 1634, 1937
Bsp119I TTCGAA 1 cut(s) 1382
Bsp1407I TGTACA 1 cut(s) 1824
Bsp143I GATC 8 cut(s) 12, 676, 727, 909, 1213, 1468, 2038, 2131
Bsp1720I GCTNAGC 1 cut(s) 156
BspACI CCGC 5 cut(s) 34, 808, 2007, 2225, 2271
BspANI GGCC 4 cut(s) 363, 659, 1046, 2278
BspCNI CTCAG 4 cut(s) 148, 255, 1739, 2034
BspHI TCATGA 2 cut(s) 385, 1096
BspLI GGNNCC 5 cut(s) 607, 869, 1573, 1641, 2269
BspPI GGATC 5 cut(s) 671, 722, 904, 1221, 2139
BspT104I TTCGAA 1 cut(s) 1382
BspT107I GGYRCC 1 cut(s) 1571
BsrBI CCGCTC 1 cut(s) 34
BsrDI GCAATG 1 cut(s) 393
BsrGI TGTACA 1 cut(s) 1824
BsrI ACTGG 3 cut(s) 197, 1989, 2302
BssECI CCNNGG 1 cut(s) 1635
BssMI GATC 8 cut(s) 12, 676, 727, 909, 1213, 1468, 2038, 2131
BssNI GRCGYC 1 cut(s) 2291
Bst2UI CCWGG 1 cut(s) 2275
Bst4CI ACNGT 4 cut(s) 878, 1017, 1251, 1282
Bst6I CTCTTC 1 cut(s) 2328
BstACI GRCGYC 1 cut(s) 2291
BstAUI TGTACA 1 cut(s) 1824
BstBI TTCGAA 1 cut(s) 1382
BstC8I GCNNGC 1 cut(s) 2262
BstDEI CTNAG 8 cut(s) 156, 263, 1256, 1432, 1621, 1726, 1754, 2042
BstENI CCTNNNNNAGG 1 cut(s) 624
BstF5I GGATG 9 cut(s) 238, 247, 615, 636, 1365, 1813, 1931, 2095, 2292
BstHHI GCGC 2 cut(s) 1845, 2260
BstKTI GATC 8 cut(s) 15, 679, 730, 912, 1216, 1471, 2041, 2134
BstMAI GTCTC 1 cut(s) 2072
BstMBI GATC 8 cut(s) 12, 676, 727, 909, 1213, 1468, 2038, 2131
BstMCI CGRYCG 2 cut(s) 15, 2225
BstMWI GCNNNNNNNGC 4 cut(s) 31, 137, 2182, 2270
BstNI CCWGG 1 cut(s) 2275
BstNSI RCATGY 1 cut(s) 2264
BstSCI CCNGG 1 cut(s) 2273
BstSFI CTRYAG 1 cut(s) 2179
BstV1I GCAGC 5 cut(s) 12, 289, 311, 385, 1120
BstX2I RGATCY 3 cut(s) 727, 1213, 2038
BstYI RGATCY 3 cut(s) 727, 1213, 2038
BsuI GTATCC 1 cut(s) 1981
BsuRI GGCC 4 cut(s) 363, 659, 1046, 2278
BtsCI GGATG 9 cut(s) 238, 247, 615, 636, 1365, 1813, 1931, 2095, 2292
BtsI GCAGTG 1 cut(s) 2203
BtsIMutI CAGTG 3 cut(s) 1247, 1982, 2203
Cac8I GCNNGC 1 cut(s) 2262
CaiI CAGNNNCTG 1 cut(s) 1984
CciI TCATGA 2 cut(s) 385, 1096
CfoI GCGC 2 cut(s) 1845, 2260
Cfr13I GGNCC 5 cut(s) 606, 658, 867, 1640, 2268
CseI GACGC 2 cut(s) 161, 2280
Csp6I GTAC 4 cut(s) 1631, 1825, 1836, 1942
CviAII CATG 9 cut(s) 386, 959, 994, 1042, 1097, 1505, 1517, 1885, 2261
CviQI GTAC 4 cut(s) 1631, 1825, 1836, 1942
DdeI CTNAG 8 cut(s) 156, 263, 1256, 1432, 1621, 1726, 1754, 2042
DpnI GATC 8 cut(s) 14, 678, 729, 911, 1215, 1470, 2040, 2133
DpnII GATC 8 cut(s) 12, 676, 727, 909, 1213, 1468, 2038, 2131
DraI TTTAAA 2 cut(s) 786, 1702
EaeI YGGCCR 1 cut(s) 2276
Eam1104I CTCTTC 1 cut(s) 2328
EarI CTCTTC 1 cut(s) 2328
Eco47I GGWCC 4 cut(s) 606, 867, 1640, 2268
Eco57I CTGAAG 4 cut(s) 27, 131, 1611, 2042
Eco88I CYCGRG 2 cut(s) 1634, 1937
EcoNI CCTNNNNNAGG 1 cut(s) 624
EcoO109I RGGNCCY 1 cut(s) 606
EcoRI GAATTC 1 cut(s) 110
EcoRII CCWGG 1 cut(s) 2273
EcoT22I ATGCAT 1 cut(s) 1506
FaeI CATG 9 cut(s) 389, 962, 997, 1045, 1100, 1508, 1520, 1888, 2264
FalI AAGNNNNNCTT 4 cut(s) 129, 161, 1359, 1391
FaqI GGGAC 2 cut(s) 619, 2281
FatI CATG 9 cut(s) 385, 958, 993, 1041, 1096, 1504, 1516, 1884, 2260
Fnu4HI GCNGC 6 cut(s) 26, 300, 303, 399, 809, 1134
FokI GGATG 9 cut(s) 245, 254, 602, 643, 1372, 1820, 1938, 2102, 2299
Fsp4HI GCNGC 6 cut(s) 26, 300, 303, 399, 809, 1134
FspBI CTAG 6 cut(s) 29, 117, 365, 402, 665, 1217
FspI TGCGCA 1 cut(s) 2259
GlaI GCGC 2 cut(s) 1844, 2259
GluI GCNGC 6 cut(s) 26, 300, 303, 399, 809, 1134
GsaI CCCAGC 1 cut(s) 2268
HaeIII GGCC 4 cut(s) 363, 659, 1046, 2278
HapII CCGG 1 cut(s) 1805
HgaI GACGC 2 cut(s) 161, 2280
HhaI GCGC 2 cut(s) 1845, 2260
Hin1I GRCGYC 1 cut(s) 2291
Hin1II CATG 9 cut(s) 389, 962, 997, 1045, 1100, 1508, 1520, 1888, 2264
Hin6I GCGC 2 cut(s) 1843, 2258
HinP1I GCGC 2 cut(s) 1843, 2258
HincII GTYRAC 2 cut(s) 579, 1968
HindII GTYRAC 2 cut(s) 579, 1968
HindIII AAGCTT 1 cut(s) 2241
HinfI GANTC 3 cut(s) 259, 1070, 2310
HpaI GTTAAC 1 cut(s) 1968
HpaII CCGG 1 cut(s) 1805
HphI GGTGA 8 cut(s) 85, 955, 1528, 1577, 1610, 1641, 1787, 2021
Hpy166II GTNNAC 7 cut(s) 579, 593, 867, 1013, 1643, 1836, 1968
Hpy188I TCNGA 7 cut(s) 264, 329, 727, 1155, 1729, 2043, 2156
Hpy188III TCNNGA 9 cut(s) 107, 149, 314, 386, 1097, 1217, 1357, 1454, 1937
Hpy8I GTNNAC 7 cut(s) 579, 593, 867, 1013, 1643, 1836, 1968
Hpy99I CGWCG 2 cut(s) 521, 2296
HpyAV CCTTC 4 cut(s) 156, 287, 316, 1916
HpyCH4III ACNGT 4 cut(s) 878, 1017, 1251, 1282
HpyCH4IV ACGT 5 cut(s) 81, 90, 102, 1991, 2048
HpyF10VI GCNNNNNNNGC 4 cut(s) 31, 137, 2182, 2270
HpyF3I CTNAG 8 cut(s) 156, 263, 1256, 1432, 1621, 1726, 1754, 2042
HpySE526I ACGT 5 cut(s) 81, 90, 102, 1991, 2048
Hsp92I GRCGYC 1 cut(s) 2291
Hsp92II CATG 9 cut(s) 389, 962, 997, 1045, 1100, 1508, 1520, 1888, 2264
HspAI GCGC 2 cut(s) 1843, 2258
KspAI GTTAAC 1 cut(s) 1968
Kzo9I GATC 8 cut(s) 12, 676, 727, 909, 1213, 1468, 2038, 2131
LmnI GCTCC 1 cut(s) 889
Lsp1109I GCAGC 5 cut(s) 12, 289, 311, 385, 1120
LweI GCATC 3 cut(s) 1146, 1798, 1916
MaeI CTAG 6 cut(s) 29, 117, 365, 402, 665, 1217
MaeII ACGT 5 cut(s) 81, 90, 102, 1991, 2048
MaeIII GTNAC 6 cut(s) 943, 989, 1251, 1775, 2009, 2314
MalI GATC 8 cut(s) 14, 678, 729, 911, 1215, 1470, 2040, 2133
MbiI CCGCTC 1 cut(s) 34
MboI GATC 8 cut(s) 12, 676, 727, 909, 1213, 1468, 2038, 2131
MboII GAAGA 9 cut(s) 77, 374, 1024, 1097, 1232, 1807, 1880, 2030, 2048
MfeI CAATTG 3 cut(s) 1669, 1742, 2123
MflI RGATCY 3 cut(s) 727, 1213, 2038
MlsI TGGCCA 1 cut(s) 2278
MluNI TGGCCA 1 cut(s) 2278
MmeI TCCRAC 3 cut(s) 177, 774, 1267
Mox20I TGGCCA 1 cut(s) 2278
Mph1103I ATGCAT 1 cut(s) 1506
MscI TGGCCA 1 cut(s) 2278
Msp20I TGGCCA 1 cut(s) 2278
MspA1I CMGCKG 1 cut(s) 302
MspI CCGG 1 cut(s) 1805
MspR9I CCNGG 1 cut(s) 2275
MunI CAATTG 3 cut(s) 1669, 1742, 2123
Mva1269I GAATGC 1 cut(s) 1553
MvaI CCWGG 1 cut(s) 2275
MwoI GCNNNNNNNGC 4 cut(s) 31, 137, 2182, 2270
NdeII GATC 8 cut(s) 12, 676, 727, 909, 1213, 1468, 2038, 2131
NlaIII CATG 9 cut(s) 389, 962, 997, 1045, 1100, 1508, 1520, 1888, 2264
NlaIV GGNNCC 5 cut(s) 607, 869, 1573, 1641, 2269
NmuCI GTSAC 4 cut(s) 943, 989, 1775, 2009
NsbI TGCGCA 1 cut(s) 2259
NsiI ATGCAT 1 cut(s) 1506
NspI RCATGY 1 cut(s) 2264
NspV TTCGAA 1 cut(s) 1382
PaeI GCATGC 1 cut(s) 2264
PaeR7I CTCGAG 1 cut(s) 1937
PagI TCATGA 2 cut(s) 385, 1096
PcsI WCGNNNNNNNCGW 1 cut(s) 87
PctI GAATGC 1 cut(s) 1553
PfeI GAWTC 3 cut(s) 259, 1070, 2310
PflFI GACNNNGTC 1 cut(s) 800
PflMI CCANNNNNTGG 1 cut(s) 2325
PkrI GCNGC 6 cut(s) 27, 301, 304, 400, 810, 1135
Ple19I CGATCG 1 cut(s) 15
PpuMI RGGWCCY 1 cut(s) 606
PshBI ATTAAT 2 cut(s) 1350, 1763
PsiI TTATAA 1 cut(s) 441
Psp1406I AACGTT 2 cut(s) 81, 2048
Psp5II RGGWCCY 1 cut(s) 606
Psp6I CCWGG 1 cut(s) 2273
PspFI CCCAGC 1 cut(s) 2264
PspGI CCWGG 1 cut(s) 2273
PspN4I GGNNCC 5 cut(s) 607, 869, 1573, 1641, 2269
PspPI GGNCC 5 cut(s) 606, 658, 867, 1640, 2268
PspPPI RGGWCCY 1 cut(s) 606
PstNI CAGNNNCTG 1 cut(s) 1984
PsuI RGATCY 3 cut(s) 727, 1213, 2038
PsyI GACNNNGTC 1 cut(s) 800
PvuI CGATCG 1 cut(s) 15
PvuII CAGCTG 1 cut(s) 302
RsaI GTAC 4 cut(s) 1632, 1826, 1837, 1943
RsaNI GTAC 4 cut(s) 1631, 1825, 1836, 1942
SatI GCNGC 6 cut(s) 26, 300, 303, 399, 809, 1134
Sau3AI GATC 8 cut(s) 12, 676, 727, 909, 1213, 1468, 2038, 2131
Sau96I GGNCC 5 cut(s) 606, 658, 867, 1640, 2268
ScaI AGTACT 1 cut(s) 1943
ScrFI CCNGG 1 cut(s) 2275
SfaNI GCATC 3 cut(s) 1146, 1798, 1916
SfcI CTRYAG 1 cut(s) 2179
Sfr274I CTCGAG 1 cut(s) 1937
SfuI TTCGAA 1 cut(s) 1382
SinI GGWCC 4 cut(s) 606, 867, 1640, 2268
SlaI CTCGAG 1 cut(s) 1937
SmlI CTYRAG 2 cut(s) 206, 1937
SmoI CTYRAG 2 cut(s) 206, 1937
SpeI ACTAGT 1 cut(s) 664
SphI GCATGC 1 cut(s) 2264
SsiI CCGC 5 cut(s) 34, 808, 2007, 2225, 2271
SspI AATATT 2 cut(s) 939, 2208
SspMI CTAG 6 cut(s) 29, 117, 365, 402, 665, 1217
StyD4I CCNGG 1 cut(s) 2273
TaaI ACNGT 4 cut(s) 878, 1017, 1251, 1282
TaiI ACGT 5 cut(s) 84, 93, 105, 1994, 2051
TaqI TCGA 6 cut(s) 519, 735, 1227, 1382, 1866, 1938
TatI WGTACW 2 cut(s) 1824, 1941
TauI GCSGC 1 cut(s) 811
TfiI GAWTC 3 cut(s) 259, 1070, 2310
TscAI CASTG 3 cut(s) 1254, 1989, 2203
TseFI GTSAC 4 cut(s) 943, 989, 1775, 2009
TseI GCWGC 5 cut(s) 25, 299, 302, 398, 1133
Tsp45I GTSAC 4 cut(s) 943, 989, 1775, 2009
TspDTI ATGAA 8 cut(s) 44, 374, 814, 1083, 1113, 1560, 1596, 2138
TspGWI ACGGA 3 cut(s) 10, 514, 1189
TspRI CASTG 3 cut(s) 1254, 1989, 2203
Tth111I GACNNNGTC 1 cut(s) 800
Van91I CCANNNNNTGG 1 cut(s) 2325
VpaK11BI GGWCC 4 cut(s) 606, 867, 1640, 2268
VspI ATTAAT 2 cut(s) 1350, 1763
XagI CCTNNNNNAGG 1 cut(s) 624
XapI RAATTY 2 cut(s) 110, 821
XbaI TCTAGA 1 cut(s) 1216
XceI RCATGY 1 cut(s) 2264
XhoI CTCGAG 1 cut(s) 1937
XspI CTAG 6 cut(s) 29, 117, 365, 402, 665, 1217
ZrmI AGTACT 1 cut(s) 1943
Zsp2I ATGCAT 1 cut(s) 1506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.