Rmu_sc0001626.1_g000016

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001626.1
OG0000018
Physical Location & Seq
Forward (+)
90928 .. 93965
3038 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001626.1_g000016.1.cds

Sequence Viewer

Length: 2871 bp
atggccgaggcactcattgccgtggttctggaacaattggttacagtttcttttgaccacacaaaagaagctgtgaagctgattttgaatgctaagacagaggtcgaaaaattcaagagtaatctagaagcaattcaagctgtgctcgaggatgctgagaagcagcaagtggagaatgctagcgtgagaaagtggttggataagctgaatgatgtctcttacaagatggttgacgtgcttgatgagtggaacactgaaattctgaaacaagaggcaaatggagttgctactgaggaaaagaaaacctccaagaaggtatgtttctccaattgcttttgttttggcccaggcctagtcaataaggcaactcatctttataaattagctaccgagatgaaagagttgaatgaaaagctaactctgattactgctcggacaaatcagtttcagtttcatcaatcctcaactcgtaggagtgatgaacaacttaggcaacagccggaaacttcatcatttgtcgatatttctagaatatttggcagagaagaagagacaggtaatttgttaggcaagttgttgagtgatagtagtgaagaaggggaaagggtccttgtcatccctgtagtgggtatgggagggatgggcaaaacaacccttgcccaattagcctacaacaatgaacgtgtaaaaacctattttgaaaagagaatatgggtttgtgtctcagatccttttgatggggtgaagattgccaaagccattattagcggtagtggtaatgacgccccaaattcaaataggttgcaagaagtcttgctgcgtatgtctgaatgtattaagaagaaaaagtgcttgatttttctagatgatgtgtggactgaagaccaaagagagtgggaaagtttaagcttacctttaataatgaaaacttgtgctaaaggtagtaaaatagtggtgaccacacgaaaagagaaagttgctcagataatgggagcaaccactcaaatgatccatttggagaagctgagtgataaaaattgtttggcattgttcaatagcattgcatatttggggagggaagaagatgaggctaatggatttggagcgataggtgagaaaatagcaaaaaagtgtaacggcttgccacttgctgcaaaaactttagggactctcatgctgtataaggaggaaatgggagagtggcagaaggtcttggatagtgagatatggtctctaaaagcggttgagcaagaagtgtttcgaacactttttttaagttattatgagttggcttctgtagttaagcgttgtcttttatactgtagtacatttccaaaaaattatcggatcaagaaacacaatttgattgagttgtggatgtcacaggattatcttcatgggaaagactataaagaaaaggaagaacaaggtcaaaatgttttcaaaaacttagtaatgctatcattttttcaagatgttgtgaaagaagtagattttgatggtaaggacgttactatattttgcaaaatgcatgatattgtgcatgactttgtaaaattcctcaataagaatgaatgctttacagtaaacggaggaaaaacggtagtaagtgaggagatccgtcatttgacattgtctgcagtctatgattctcgacttttgaattttatctcaccggtcaatcgcaaaaagttacgcactcttgcaacttttgattcaagaatgagtagcatggccatagacggaatctcacagctgagatgtctgaggaccttaaatttgagctgcatctacgacatttgtgaacttccagaagggataggcaaattgatacatctgaggtatctcgacttgtctaaaaatcatagtttgaagaaactaccggacagtgtgggaaatttatacaatttgcaaaccttgtgtcttactgactgcggggagattagaacactgcctgaaaatatggggaacttgattaatttaagacaccttcataacaagggttgttataagctggagtatttgccgagaggtatggcgagattaacaagtctgcaaacactaaattggtatcctgttactaatgatagtggccccggtaacggcttgaaattaggagatctgggaagcttcgaccagcttcagggtagtctcgcgattatcatcaaggggaatgctcacttgtggaagtctcatcattctttggagatagacttttggactttggaggagcagagccatgtacaagtcctggaggcgttacggccgcatcaagatctggaaaatttaaggatttcggggtatcttggcaccaccgcgcccagttggatgatatacttacagaatttgagatccctttctcttaggaactggcgtgtatgcgaatttttgcctcctcttgggaaattgccgttgcttgaagaactatcagtggaatggttgggcaaagtgaagacggttggagatgaatttttaggaataacgggcactcaaacatcatcatcctcctcctctgttttattcccaaaattgaaacaactcaccttctgtgtcatgagtgagtggaaacagtgggaaggagttggagggcggacagaaaacggtggtgatgaaattacaattatgccatgccttgtttccctcacaatcaagggctgccctcagctgatgaacctgccactcttcctgcaaaagacaccggtcaggaatgttgaaatcagcttttgtcgtcggagtattataatacctgtcatgcccgagaactgtcgcgtcgacatttctgatgagagggaggatccggtaataccggatgatactgagagggttgaaacagagactcagacagatgaggagatcaccaccatcacctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

956

Amino Acids

108.5

Weight (kDa)

6.09

Isoelectric Point (pI)

42.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 378, 2010, 2741
Acc36I ACCTGC 1 cut(s) 2682
AccB1I GGYRCC 1 cut(s) 2309
AccI GTMKAC 1 cut(s) 2772
AccII CGCG 3 cut(s) 2156, 2318, 2769
AciI CCGC 6 cut(s) 768, 1241, 1935, 2267, 2316, 2590
AclWI GGATC 7 cut(s) 722, 1003, 1355, 1612, 2346, 2789, 2802
AcoI YGGCCR 3 cut(s) 3, 1734, 2264
AcuI CTGAAG 2 cut(s) 900, 2126
AcyI GRCGYC 1 cut(s) 783
AfaI GTAC 2 cut(s) 1327, 2244
AfiI CCNNNNNNNGG 6 cut(s) 625, 626, 737, 2102, 2143, 2399
AflIII ACRYGT 1 cut(s) 682
AgeI ACCGGT 2 cut(s) 1675, 2698
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 2 cut(s) 346, 2250
Alw21I GWGCWC 1 cut(s) 147
Alw26I GTCTC 7 cut(s) 220, 545, 727, 1236, 2156, 2196, 2828
AlwI GGATC 7 cut(s) 722, 1003, 1355, 1612, 2346, 2789, 2802
Ama87I CYCGRG 2 cut(s) 146, 2756
AoxI GGCC 6 cut(s) 3, 343, 349, 1734, 2092, 2264
ApeKI GCWGC 5 cut(s) 163, 817, 1151, 1785, 2655
ArsI GACNNNNNNTTYG 6 cut(s) 544, 576, 1762, 1794, 1906, 1938
AseI ATTAAT 1 cut(s) 1977
AsiGI ACCGGT 2 cut(s) 1675, 2698
Asp700I GAANNNNTTC 2 cut(s) 132, 1257
AspLEI GCGC 1 cut(s) 2320
AspS9I GGNCC 4 cut(s) 344, 607, 1770, 2093
AsuC2I CCSGG 1 cut(s) 2097
AsuHPI GGTGA 8 cut(s) 754, 967, 1124, 1665, 2533, 2618, 2848, 2857
AsuII TTCGAA 1 cut(s) 1261
AsuNHI GCTAGC 1 cut(s) 179
AvaI CYCGRG 2 cut(s) 146, 2756
AvaII GGWCC 2 cut(s) 607, 1770
BaeGI GKGCMC 1 cut(s) 2489
BalI TGGCCA 1 cut(s) 1736
BamHI GGATCC 1 cut(s) 2794
BanI GGYRCC 1 cut(s) 2309
BbsI GAAGAC 2 cut(s) 888, 2459
Bbv12I GWGCWC 1 cut(s) 147
BbvCI CCTCAGC 1 cut(s) 2661
BbvI GCAGC 5 cut(s) 175, 804, 1138, 1772, 2642
BccI CCATC 5 cut(s) 220, 634, 731, 1493, 2870
BceAI ACGGC 5 cut(s) 5, 1153, 2119, 2279, 2395
BciT130I CCWGG 2 cut(s) 348, 2252
BciVI GTATCC 1 cut(s) 2082
BcnI CCSGG 1 cut(s) 2097
BcoDI GTCTC 7 cut(s) 220, 545, 727, 1236, 2156, 2196, 2828
BfaI CTAG 5 cut(s) 125, 180, 353, 528, 863
BfmI CTRYAG 4 cut(s) 621, 1296, 1321, 1638
BfuAI ACCTGC 1 cut(s) 2682
BfuI GTATCC 1 cut(s) 2082
BglII AGATCT 2 cut(s) 2119, 2275
BisI GCNGC 6 cut(s) 164, 818, 1152, 1786, 2267, 2656
BlsI GCNGC 6 cut(s) 165, 819, 1153, 1787, 2268, 2657
Bme1390I CCNGG 3 cut(s) 348, 2097, 2252
Bme18I GGWCC 2 cut(s) 607, 1770
BmeT110I CYCGRG 2 cut(s) 146, 2756
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 4 cut(s) 344, 607, 1770, 2093
BmiI GGNNCC 4 cut(s) 608, 2095, 2311, 2796
BmrFI CCNGG 3 cut(s) 348, 2097, 2252
BmrI ACTGGG 1 cut(s) 2316
BmsI GCATC 3 cut(s) 142, 1797, 2278
BmtI GCTAGC 1 cut(s) 183
BmuI ACTGGG 1 cut(s) 2316
BoxI GACNNNNGTC 2 cut(s) 101, 2699
BpiI GAAGAC 2 cut(s) 888, 2459
BpmI CTGGAG 2 cut(s) 2036, 2273
Bpu10I CCTNAGC 1 cut(s) 2661
Bpu14I TTCGAA 1 cut(s) 1261
BpuMI CCSGG 1 cut(s) 2097
BsaBI GATNNNNATC 1 cut(s) 2162
BsaHI GRCGYC 1 cut(s) 783
BsaI GGTCTC 1 cut(s) 1236
BsaJI CCNNGG 4 cut(s) 6, 21, 346, 2095
BsaWI WCCGGW 5 cut(s) 1675, 1882, 2698, 2797, 2806
Bsc4I CCNNNNNNNGG 6 cut(s) 625, 626, 737, 2102, 2143, 2399
Bse118I RCCGGY 2 cut(s) 1675, 2698
Bse1I ACTGG 2 cut(s) 2322, 2375
Bse3DI GCAATG 2 cut(s) 15, 1059
Bse8I GATNNNNATC 1 cut(s) 2162
BseBI CCWGG 2 cut(s) 348, 2252
BseDI CCNNGG 4 cut(s) 6, 21, 346, 2095
BseGI GGATG 7 cut(s) 157, 615, 645, 1383, 2334, 2501, 2815
BseJI GATNNNNATC 1 cut(s) 2162
BseLI CCNNNNNNNGG 6 cut(s) 625, 626, 737, 2102, 2143, 2399
BseMI GCAATG 2 cut(s) 15, 1059
BseNI ACTGG 2 cut(s) 2322, 2375
BseRI GAGGAG 6 cut(s) 1628, 2243, 2385, 2497, 2500, 2864
BseSI GKGCMC 1 cut(s) 2489
BseX3I CGGCCG 1 cut(s) 2264
BseXI GCAGC 5 cut(s) 175, 804, 1138, 1772, 2642
Bsh1236I CGCG 3 cut(s) 2156, 2318, 2769
Bsh1285I CGRYCG 1 cut(s) 2267
BshFI GGCC 6 cut(s) 5, 345, 351, 1736, 2094, 2266
BshNI GGYRCC 1 cut(s) 2309
BshTI ACCGGT 2 cut(s) 1675, 2698
BsiEI CGRYCG 1 cut(s) 2267
BsiHKAI GWGCWC 1 cut(s) 147
BsiHKCI CYCGRG 2 cut(s) 146, 2756
BsiSI CCGG 7 cut(s) 500, 1676, 1883, 2097, 2699, 2798, 2807
BslFI GGGAC 1 cut(s) 1180
BslI CCNNNNNNNGG 6 cut(s) 625, 626, 737, 2102, 2143, 2399
BsmAI GTCTC 7 cut(s) 220, 545, 727, 1236, 2156, 2196, 2828
BsmFI GGGAC 1 cut(s) 1180
BsmI GAATGC 4 cut(s) 94, 181, 1580, 2179
BsnI GGCC 6 cut(s) 5, 345, 351, 1736, 2094, 2266
Bso31I GGTCTC 1 cut(s) 1236
BsoBI CYCGRG 2 cut(s) 146, 2756
Bsp119I TTCGAA 1 cut(s) 1261
Bsp1286I GDGCHC 2 cut(s) 147, 2489
Bsp1407I TGTACA 1 cut(s) 2242
Bsp143I GATC 9 cut(s) 727, 1008, 1347, 1617, 2119, 2275, 2351, 2794, 2853
Bsp68I TCGCGA 1 cut(s) 2156
BspACI CCGC 6 cut(s) 768, 1241, 1935, 2267, 2316, 2590
BspANI GGCC 6 cut(s) 5, 345, 351, 1736, 2094, 2266
BspFNI CGCG 3 cut(s) 2156, 2318, 2769
BspHI TCATGA 1 cut(s) 2553
BspLI GGNNCC 4 cut(s) 608, 2095, 2311, 2796
BspMAI CTGCAG 1 cut(s) 1642
BspMI ACCTGC 1 cut(s) 2682
BspOI GCTAGC 1 cut(s) 183
BspPI GGATC 7 cut(s) 722, 1003, 1355, 1612, 2346, 2789, 2802
BspT104I TTCGAA 1 cut(s) 1261
BspT107I GGYRCC 1 cut(s) 2309
BspTNI GGTCTC 1 cut(s) 1236
BsrDI GCAATG 2 cut(s) 15, 1059
BsrFI RCCGGY 2 cut(s) 1675, 2698
BsrGI TGTACA 1 cut(s) 2242
BsrI ACTGG 2 cut(s) 2322, 2375
BssAI RCCGGY 2 cut(s) 1675, 2698
BssECI CCNNGG 4 cut(s) 6, 21, 346, 2095
BssMI GATC 9 cut(s) 727, 1008, 1347, 1617, 2119, 2275, 2351, 2794, 2853
BssNI GRCGYC 1 cut(s) 783
Bst2UI CCWGG 2 cut(s) 348, 2252
Bst4CI ACNGT 9 cut(s) 46, 1322, 1585, 1603, 1889, 2458, 2571, 2603, 2765
Bst6I CTCTTC 2 cut(s) 543, 2687
BstACI GRCGYC 1 cut(s) 783
BstAPI GCANNNNNTGC 1 cut(s) 17
BstAUI TGTACA 1 cut(s) 2242
BstBI TTCGAA 1 cut(s) 1261
BstC8I GCNNGC 2 cut(s) 181, 1142
BstDSI CCRYGG 1 cut(s) 21
BstEII GGTNACC 1 cut(s) 955
BstF5I GGATG 7 cut(s) 157, 615, 645, 1383, 2334, 2501, 2815
BstFNI CGCG 3 cut(s) 2156, 2318, 2769
BstHHI GCGC 1 cut(s) 2320
BstKTI GATC 9 cut(s) 730, 1011, 1350, 1620, 2122, 2278, 2354, 2797, 2856
BstMAI GTCTC 7 cut(s) 220, 545, 727, 1236, 2156, 2196, 2828
BstMBI GATC 9 cut(s) 727, 1008, 1347, 1617, 2119, 2275, 2351, 2794, 2853
BstMCI CGRYCG 1 cut(s) 2267
BstMWI GCNNNNNNNGC 3 cut(s) 17, 137, 665
BstNI CCWGG 2 cut(s) 348, 2252
BstPAI GACNNNNGTC 2 cut(s) 101, 2699
BstPI GGTNACC 1 cut(s) 955
BstSCI CCNGG 3 cut(s) 346, 2095, 2250
BstSFI CTRYAG 4 cut(s) 621, 1296, 1321, 1638
BstSLI GKGCMC 1 cut(s) 2489
BstUI CGCG 3 cut(s) 2156, 2318, 2769
BstV1I GCAGC 5 cut(s) 175, 804, 1138, 1772, 2642
BstV2I GAAGAC 2 cut(s) 888, 2459
BstX2I RGATCY 6 cut(s) 727, 1617, 2119, 2275, 2351, 2794
BstYI RGATCY 6 cut(s) 727, 1617, 2119, 2275, 2351, 2794
BstZI CGGCCG 1 cut(s) 2264
BsuI GTATCC 1 cut(s) 2082
BsuRI GGCC 6 cut(s) 5, 345, 351, 1736, 2094, 2266
BtgI CCRYGG 1 cut(s) 21
BtrI CACGTC 1 cut(s) 235
BtsCI GGATG 7 cut(s) 157, 615, 645, 1383, 2334, 2501, 2815
BtsI GCAGTG 1 cut(s) 1949
BtsIMutI CAGTG 5 cut(s) 252, 1894, 1949, 2436, 2576
BtuMI TCGCGA 1 cut(s) 2156
BveI ACCTGC 1 cut(s) 2682
Cac8I GCNNGC 2 cut(s) 181, 1142
CciI TCATGA 1 cut(s) 2553
CfoI GCGC 1 cut(s) 2320
Cfr10I RCCGGY 2 cut(s) 1675, 2698
Cfr13I GGNCC 4 cut(s) 344, 607, 1770, 2093
CseI GACGC 2 cut(s) 791, 2758
Csp6I GTAC 2 cut(s) 1326, 2243
CspAI ACCGGT 2 cut(s) 1675, 2698
CspCI CAANNNNNGTGG 2 cut(s) 875, 910
CviAII CATG 9 cut(s) 1174, 1397, 1532, 1544, 1732, 2240, 2554, 2628, 2752
CviQI GTAC 2 cut(s) 1326, 2243
DpnI GATC 9 cut(s) 729, 1010, 1349, 1619, 2121, 2277, 2353, 2796, 2855
DpnII GATC 9 cut(s) 727, 1008, 1347, 1617, 2119, 2275, 2351, 2794, 2853
EaeI YGGCCR 3 cut(s) 3, 1734, 2264
EagI CGGCCG 1 cut(s) 2264
Eam1104I CTCTTC 2 cut(s) 543, 2687
EarI CTCTTC 2 cut(s) 543, 2687
EciI GGCGGA 1 cut(s) 2605
EclXI CGGCCG 1 cut(s) 2264
Eco147I AGGCCT 1 cut(s) 351
Eco31I GGTCTC 1 cut(s) 1236
Eco47I GGWCC 2 cut(s) 607, 1770
Eco52I CGGCCG 1 cut(s) 2264
Eco57I CTGAAG 2 cut(s) 900, 2126
Eco88I CYCGRG 2 cut(s) 146, 2756
Eco91I GGTNACC 1 cut(s) 955
EcoO109I RGGNCCY 2 cut(s) 607, 1770
EcoO65I GGTNACC 1 cut(s) 955
EcoRII CCWGG 2 cut(s) 346, 2250
EcoT22I ATGCAT 1 cut(s) 1533
FaeI CATG 9 cut(s) 1177, 1400, 1535, 1547, 1735, 2243, 2557, 2631, 2755
FalI AAGNNNNNCTT 2 cut(s) 898, 930
FaqI GGGAC 1 cut(s) 1180
FatI CATG 9 cut(s) 1173, 1396, 1531, 1543, 1731, 2239, 2553, 2627, 2751
FauI CCCGC 1 cut(s) 1928
FblI GTMKAC 1 cut(s) 2772
Fnu4HI GCNGC 6 cut(s) 164, 818, 1152, 1786, 2267, 2656
FokI GGATG 7 cut(s) 164, 602, 652, 1390, 2341, 2488, 2822
Fsp4HI GCNGC 6 cut(s) 164, 818, 1152, 1786, 2267, 2656
FspBI CTAG 5 cut(s) 125, 180, 353, 528, 863
GlaI GCGC 1 cut(s) 2319
GluI GCNGC 6 cut(s) 164, 818, 1152, 1786, 2267, 2656
GsuI CTGGAG 2 cut(s) 2036, 2273
HaeIII GGCC 6 cut(s) 5, 345, 351, 1736, 2094, 2266
HapII CCGG 7 cut(s) 500, 1676, 1883, 2097, 2699, 2798, 2807
HgaI GACGC 2 cut(s) 791, 2758
HhaI GCGC 1 cut(s) 2320
Hin1I GRCGYC 1 cut(s) 783
Hin1II CATG 9 cut(s) 1177, 1400, 1535, 1547, 1735, 2243, 2557, 2631, 2755
Hin6I GCGC 1 cut(s) 2318
HinP1I GCGC 1 cut(s) 2318
HincII GTYRAC 2 cut(s) 232, 2773
HindII GTYRAC 2 cut(s) 232, 2773
HindIII AAGCTT 2 cut(s) 907, 2128
HinfI GANTC 5 cut(s) 1168, 1649, 1715, 1746, 2836
HpaII CCGG 7 cut(s) 500, 1676, 1883, 2097, 2699, 2798, 2807
HphI GGTGA 8 cut(s) 754, 967, 1124, 1665, 2533, 2618, 2848, 2857
Hpy166II GTNNAC 5 cut(s) 232, 876, 1588, 1805, 2773
Hpy8I GTNNAC 5 cut(s) 232, 876, 1588, 1805, 2773
Hpy99I CGWCG 2 cut(s) 2733, 2774
HpyAV CCTTC 7 cut(s) 307, 590, 1201, 1808, 2000, 2554, 2570
HpyCH4III ACNGT 9 cut(s) 46, 1322, 1585, 1603, 1889, 2458, 2571, 2603, 2765
HpyCH4IV ACGT 3 cut(s) 234, 682, 1509
HpyF10VI GCNNNNNNNGC 3 cut(s) 17, 137, 665
HpySE526I ACGT 3 cut(s) 234, 682, 1509
Hsp92I GRCGYC 1 cut(s) 783
Hsp92II CATG 9 cut(s) 1177, 1400, 1535, 1547, 1735, 2243, 2557, 2631, 2755
HspAI GCGC 1 cut(s) 2318
Kzo9I GATC 9 cut(s) 727, 1008, 1347, 1617, 2119, 2275, 2351, 2794, 2853
LmnI GCTCC 3 cut(s) 992, 1103, 2230
Lsp1109I GCAGC 5 cut(s) 175, 804, 1138, 1772, 2642
LweI GCATC 3 cut(s) 142, 1797, 2278
MaeI CTAG 5 cut(s) 125, 180, 353, 528, 863
MaeII ACGT 3 cut(s) 234, 682, 1509
MaeIII GTNAC 9 cut(s) 40, 955, 1133, 1380, 1510, 1692, 2077, 2099, 2259
MalI GATC 9 cut(s) 729, 1010, 1349, 1619, 2121, 2277, 2353, 2796, 2855
MboI GATC 9 cut(s) 727, 1008, 1347, 1617, 2119, 2275, 2351, 2794, 2853
MfeI CAATTG 2 cut(s) 35, 328
MflI RGATCY 6 cut(s) 727, 1617, 2119, 2275, 2351, 2794
MhlI GDGCHC 2 cut(s) 147, 2489
MlsI TGGCCA 1 cut(s) 1736
MluNI TGGCCA 1 cut(s) 1736
MlyI GAGTC 2 cut(s) 1162, 2830
MmeI TCCRAC 5 cut(s) 177, 2306, 2440, 2563, 2711
Mox20I TGGCCA 1 cut(s) 1736
Mph1103I ATGCAT 1 cut(s) 1533
MroXI GAANNNNTTC 2 cut(s) 132, 1257
MscI TGGCCA 1 cut(s) 1736
MslI CAYNNNNRTG 2 cut(s) 20, 1004
Msp20I TGGCCA 1 cut(s) 1736
MspA1I CMGCKG 2 cut(s) 1756, 2665
MspI CCGG 7 cut(s) 500, 1676, 1883, 2097, 2699, 2798, 2807
MspR9I CCNGG 3 cut(s) 348, 2097, 2252
MunI CAATTG 2 cut(s) 35, 328
Mva1269I GAATGC 4 cut(s) 94, 181, 1580, 2179
MvaI CCWGG 2 cut(s) 348, 2252
MvnI CGCG 3 cut(s) 2156, 2318, 2769
MwoI GCNNNNNNNGC 3 cut(s) 17, 137, 665
NciI CCSGG 1 cut(s) 2097
NdeII GATC 9 cut(s) 727, 1008, 1347, 1617, 2119, 2275, 2351, 2794, 2853
NheI GCTAGC 1 cut(s) 179
NlaIII CATG 9 cut(s) 1177, 1400, 1535, 1547, 1735, 2243, 2557, 2631, 2755
NlaIV GGNNCC 4 cut(s) 608, 2095, 2311, 2796
NmeAIII GCCGAG 2 cut(s) 31, 2052
NmuCI GTSAC 2 cut(s) 955, 1380
NruI TCGCGA 1 cut(s) 2156
NsiI ATGCAT 1 cut(s) 1533
NspV TTCGAA 1 cut(s) 1261
PaeR7I CTCGAG 1 cut(s) 146
PagI TCATGA 1 cut(s) 2553
PceI AGGCCT 1 cut(s) 351
PctI GAATGC 4 cut(s) 94, 181, 1580, 2179
PdmI GAANNNNTTC 2 cut(s) 132, 1257
PfeI GAWTC 3 cut(s) 1649, 1715, 1746
PflFI GACNNNGTC 1 cut(s) 1633
PfoI TCCNGGA 1 cut(s) 2250
PinAI ACCGGT 2 cut(s) 1675, 2698
PkrI GCNGC 6 cut(s) 165, 819, 1153, 1787, 2268, 2657
PleI GAGTC 2 cut(s) 1162, 2830
PpsI GAGTC 2 cut(s) 1162, 2830
PpuMI RGGWCCY 2 cut(s) 607, 1770
PshAI GACNNNNGTC 2 cut(s) 101, 2699
PshBI ATTAAT 1 cut(s) 1977
PsiI TTATAA 3 cut(s) 378, 2010, 2741
Psp5II RGGWCCY 2 cut(s) 607, 1770
Psp6I CCWGG 2 cut(s) 346, 2250
PspEI GGTNACC 1 cut(s) 955
PspGI CCWGG 2 cut(s) 346, 2250
PspN4I GGNNCC 4 cut(s) 608, 2095, 2311, 2796
PspPI GGNCC 4 cut(s) 344, 607, 1770, 2093
PspPPI RGGWCCY 2 cut(s) 607, 1770
PspXI VCTCGAGB 1 cut(s) 146
PstI CTGCAG 1 cut(s) 1642
PsuI RGATCY 6 cut(s) 727, 1617, 2119, 2275, 2351, 2794
PsyI GACNNNGTC 1 cut(s) 1633
PvuII CAGCTG 2 cut(s) 1756, 2665
RruI TCGCGA 1 cut(s) 2156
RsaI GTAC 2 cut(s) 1327, 2244
RsaNI GTAC 2 cut(s) 1326, 2243
RseI CAYNNNNRTG 2 cut(s) 20, 1004
SalI GTCGAC 1 cut(s) 2771
SatI GCNGC 6 cut(s) 164, 818, 1152, 1786, 2267, 2656
Sau3AI GATC 9 cut(s) 727, 1008, 1347, 1617, 2119, 2275, 2351, 2794, 2853
Sau96I GGNCC 4 cut(s) 344, 607, 1770, 2093
SchI GAGTC 2 cut(s) 1162, 2830
ScrFI CCNGG 3 cut(s) 348, 2097, 2252
SduI GDGCHC 2 cut(s) 147, 2489
SfaNI GCATC 3 cut(s) 142, 1797, 2278
SfcI CTRYAG 4 cut(s) 621, 1296, 1321, 1638
Sfr274I CTCGAG 1 cut(s) 146
SfuI TTCGAA 1 cut(s) 1261
SinI GGWCC 2 cut(s) 607, 1770
SlaI CTCGAG 1 cut(s) 146
SmiMI CAYNNNNRTG 2 cut(s) 20, 1004
SmlI CTYRAG 1 cut(s) 146
SmoI CTYRAG 1 cut(s) 146
SseBI AGGCCT 1 cut(s) 351
SsiI CCGC 6 cut(s) 768, 1241, 1935, 2267, 2316, 2590
SspI AATATT 1 cut(s) 534
SspMI CTAG 5 cut(s) 125, 180, 353, 528, 863
StuI AGGCCT 1 cut(s) 351
StyD4I CCNGG 3 cut(s) 346, 2095, 2250
TaaI ACNGT 9 cut(s) 46, 1322, 1585, 1603, 1889, 2458, 2571, 2603, 2765
TaiI ACGT 3 cut(s) 237, 685, 1512
TaqI TCGA 8 cut(s) 105, 147, 519, 1261, 1654, 1848, 2133, 2772
TatI WGTACW 2 cut(s) 1325, 2242
TauI GCSGC 1 cut(s) 2269
TfiI GAWTC 3 cut(s) 1649, 1715, 1746
TscAI CASTG 5 cut(s) 259, 1894, 1956, 2436, 2576
TseFI GTSAC 2 cut(s) 955, 1380
TseI GCWGC 5 cut(s) 163, 817, 1151, 1785, 2655
Tsp45I GTSAC 2 cut(s) 955, 1380
TspGWI ACGGA 3 cut(s) 1605, 1610, 1758
TspRI CASTG 5 cut(s) 259, 1894, 1956, 2436, 2576
Tth111I GACNNNGTC 1 cut(s) 1633
VpaK11BI GGWCC 2 cut(s) 607, 1770
VspI ATTAAT 1 cut(s) 1977
XbaI TCTAGA 3 cut(s) 124, 527, 862
XhoI CTCGAG 1 cut(s) 146
XmiI GTMKAC 1 cut(s) 2772
XmnI GAANNNNTTC 2 cut(s) 132, 1257
XspI CTAG 5 cut(s) 125, 180, 353, 528, 863
Zsp2I ATGCAT 1 cut(s) 1533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.