disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 6 - 96 | 4.4e-21 | Rx N-terminal domain |
| NB-ARC | PF00931 | 187 - 362 | 3.5e-35 | NB-ARC domain |
| WHD_DRP | PF23559 | 448 - 519 | 6.5e-25 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 571 - 896 | 1.2e-36 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 713 - 835 | 1.6e-26 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1638 |
| AccB1I | GGYRCC | 2 cut(s) | 2372, 2691 |
| AccII | CGCG | 1 cut(s) | 1954 |
| AciI | CCGC | 5 cut(s) | 275, 486, 1219, 1474, 1954 |
| AclWI | GGATC | 7 cut(s) | 737, 750, 789, 802, 1018, 1803, 2402 |
| AcoI | YGGCCR | 3 cut(s) | 487, 553, 2259 |
| AcsI | RAATTY | 9 cut(s) | 574, 822, 916, 1789, 1873, 2338, 2487, 2534, 2574 |
| AcuI | CTGAAG | 2 cut(s) | 27, 2147 |
| AcvI | CACGTG | 1 cut(s) | 848 |
| AfaI | GTAC | 7 cut(s) | 221, 330, 961, 1668, 2045, 2085, 2734 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 641, 2164, 2465 |
| AflIII | ACRYGT | 2 cut(s) | 845, 847 |
| AjiI | CACGTC | 1 cut(s) | 235 |
| AjnI | CCWGG | 2 cut(s) | 135, 2271 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2213, 2245 |
| Alw21I | GWGCWC | 2 cut(s) | 952, 2247 |
| Alw26I | GTCTC | 4 cut(s) | 742, 2388, 2406, 2572 |
| AlwI | GGATC | 7 cut(s) | 737, 750, 789, 802, 1018, 1803, 2402 |
| AoxI | GGCC | 5 cut(s) | 177, 487, 553, 2259, 2634 |
| ApeKI | GCWGC | 3 cut(s) | 117, 1017, 1166 |
| ApoI | RAATTY | 9 cut(s) | 574, 822, 916, 1789, 1873, 2338, 2487, 2534, 2574 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1774, 1806 |
| AspS9I | GGNCC | 4 cut(s) | 622, 891, 2155, 2634 |
| AsuC2I | CCSGG | 1 cut(s) | 1629 |
| AsuHPI | GGTGA | 8 cut(s) | 85, 458, 664, 982, 1139, 1643, 2123, 2312 |
| AsuII | TTCGAA | 1 cut(s) | 2607 |
| AvaII | GGWCC | 3 cut(s) | 622, 891, 2155 |
| AxyI | CCTNAGG | 1 cut(s) | 1778 |
| BaeGI | GKGCMC | 1 cut(s) | 2696 |
| BamHI | GGATCC | 2 cut(s) | 742, 794 |
| BanI | GGYRCC | 2 cut(s) | 2372, 2691 |
| BbrPI | CACGTG | 1 cut(s) | 848 |
| BbsI | GAAGAC | 1 cut(s) | 903 |
| Bbv12I | GWGCWC | 2 cut(s) | 952, 2247 |
| BbvCI | CCTCAGC | 2 cut(s) | 6, 2039 |
| BbvI | GCAGC | 3 cut(s) | 129, 1029, 1153 |
| BccI | CCATC | 8 cut(s) | 220, 605, 640, 649, 785, 2426, 2485, 2608 |
| BceAI | ACGGC | 1 cut(s) | 2246 |
| BciT130I | CCWGG | 2 cut(s) | 137, 2273 |
| BcnI | CCSGG | 1 cut(s) | 1629 |
| BcoDI | GTCTC | 4 cut(s) | 742, 2388, 2406, 2572 |
| BfmI | CTRYAG | 1 cut(s) | 1311 |
| BglII | AGATCT | 1 cut(s) | 2140 |
| BisI | GCNGC | 4 cut(s) | 118, 487, 1018, 1167 |
| BlsI | GCNGC | 4 cut(s) | 119, 488, 1019, 1168 |
| BmcAI | AGTACT | 1 cut(s) | 2085 |
| Bme1390I | CCNGG | 3 cut(s) | 137, 1629, 2273 |
| Bme18I | GGWCC | 3 cut(s) | 622, 891, 2155 |
| BmgBI | CACGTC | 1 cut(s) | 235 |
| BmgT120I | GGNCC | 4 cut(s) | 622, 891, 2155, 2634 |
| BmiI | GGNNCC | 7 cut(s) | 623, 744, 796, 1308, 2171, 2374, 2693 |
| BmrFI | CCNGG | 3 cut(s) | 137, 1629, 2273 |
| BmrI | ACTGGG | 2 cut(s) | 670, 2632 |
| BmsI | GCATC | 4 cut(s) | 142, 1900, 2020, 2194 |
| BmuI | ACTGGG | 2 cut(s) | 670, 2632 |
| BpiI | GAAGAC | 1 cut(s) | 903 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 934, 966, 1094, 1126, 2234, 2266 |
| BpmI | CTGGAG | 3 cut(s) | 50, 1825, 2513 |
| Bpu10I | CCTNAGC | 3 cut(s) | 6, 951, 2039 |
| Bpu14I | TTCGAA | 1 cut(s) | 2607 |
| BpuEI | CTTGAG | 1 cut(s) | 167 |
| BpuMI | CCSGG | 1 cut(s) | 1629 |
| Bsa29I | ATCGAT | 1 cut(s) | 2612 |
| BsaAI | YACGTR | 2 cut(s) | 848, 1670 |
| BsaJI | CCNNGG | 2 cut(s) | 1980, 2368 |
| BsaWI | WCCGGW | 2 cut(s) | 347, 1906 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1798, 1828, 2431, 2461 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 641, 2164, 2465 |
| Bse1I | ACTGG | 7 cut(s) | 84, 197, 676, 929, 972, 1808, 2627 |
| Bse21I | CCTNAGG | 1 cut(s) | 1778 |
| Bse3DI | GCAATG | 2 cut(s) | 1992, 2321 |
| BseBI | CCWGG | 2 cut(s) | 137, 2273 |
| BseCI | ATCGAT | 1 cut(s) | 2612 |
| BseDI | CCNNGG | 2 cut(s) | 1980, 2368 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 641, 2164, 2465 |
| BseMI | GCAATG | 2 cut(s) | 1992, 2321 |
| BseMII | CTCAG | 5 cut(s) | 277, 965, 2030, 2583, 2664 |
| BseNI | ACTGG | 7 cut(s) | 84, 197, 676, 929, 972, 1808, 2627 |
| BseRI | GAGGAG | 2 cut(s) | 293, 2451 |
| BseSI | GKGCMC | 1 cut(s) | 2696 |
| BseXI | GCAGC | 3 cut(s) | 129, 1029, 1153 |
| BsgI | GTGCAG | 1 cut(s) | 1577 |
| Bsh1236I | CGCG | 1 cut(s) | 1954 |
| BshFI | GGCC | 5 cut(s) | 179, 489, 555, 2261, 2636 |
| BshNI | GGYRCC | 2 cut(s) | 2372, 2691 |
| BshVI | ATCGAT | 1 cut(s) | 2612 |
| BsiHKAI | GWGCWC | 2 cut(s) | 952, 2247 |
| BsiSI | CCGG | 3 cut(s) | 348, 1628, 1907 |
| BsiWI | CGTACG | 1 cut(s) | 219 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 641, 2164, 2465 |
| BsmAI | GTCTC | 4 cut(s) | 742, 2388, 2406, 2572 |
| BsmI | GAATGC | 2 cut(s) | 94, 1583 |
| BsnI | GGCC | 5 cut(s) | 179, 489, 555, 2261, 2636 |
| Bsp119I | TTCGAA | 1 cut(s) | 2607 |
| Bsp1286I | GDGCHC | 3 cut(s) | 952, 2247, 2696 |
| Bsp143I | GATC | 9 cut(s) | 742, 774, 794, 1023, 1384, 1808, 2140, 2394, 2742 |
| Bsp19I | CCATGG | 1 cut(s) | 2368 |
| BspACI | CCGC | 5 cut(s) | 275, 486, 1219, 1474, 1954 |
| BspANI | GGCC | 5 cut(s) | 179, 489, 555, 2261, 2636 |
| BspCNI | CTCAG | 5 cut(s) | 276, 964, 2031, 2582, 2665 |
| BspDI | ATCGAT | 1 cut(s) | 2612 |
| BspFNI | CGCG | 1 cut(s) | 1954 |
| BspLI | GGNNCC | 7 cut(s) | 623, 744, 796, 1308, 2171, 2374, 2693 |
| BspMAI | CTGCAG | 1 cut(s) | 1315 |
| BspPI | GGATC | 7 cut(s) | 737, 750, 789, 802, 1018, 1803, 2402 |
| BspQI | GCTCTTC | 1 cut(s) | 2280 |
| BspT104I | TTCGAA | 1 cut(s) | 2607 |
| BspT107I | GGYRCC | 2 cut(s) | 2372, 2691 |
| BsrDI | GCAATG | 2 cut(s) | 1992, 2321 |
| BsrI | ACTGG | 7 cut(s) | 84, 197, 676, 929, 972, 1808, 2627 |
| BssECI | CCNNGG | 2 cut(s) | 1980, 2368 |
| BssMI | GATC | 9 cut(s) | 742, 774, 794, 1023, 1384, 1808, 2140, 2394, 2742 |
| BssT1I | CCWWGG | 2 cut(s) | 1980, 2368 |
| Bst2UI | CCWGG | 2 cut(s) | 137, 2273 |
| Bst4CI | ACNGT | 2 cut(s) | 1463, 2229 |
| Bst6I | CTCTTC | 2 cut(s) | 2280, 2622 |
| BstBAI | YACGTR | 2 cut(s) | 848, 1670 |
| BstBI | TTCGAA | 1 cut(s) | 2607 |
| BstC8I | GCNNGC | 3 cut(s) | 122, 181, 1820 |
| BstDEI | CTNAG | 8 cut(s) | 6, 263, 951, 1289, 1778, 2039, 2569, 2673 |
| BstDSI | CCRYGG | 1 cut(s) | 2368 |
| BstEII | GGTNACC | 1 cut(s) | 970 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 639 |
| BstFNI | CGCG | 1 cut(s) | 1954 |
| BstKTI | GATC | 9 cut(s) | 745, 777, 797, 1026, 1387, 1811, 2143, 2397, 2745 |
| BstMAI | GTCTC | 4 cut(s) | 742, 2388, 2406, 2572 |
| BstMBI | GATC | 9 cut(s) | 742, 774, 794, 1023, 1384, 1808, 2140, 2394, 2742 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 31, 137 |
| BstNI | CCWGG | 2 cut(s) | 137, 2273 |
| BstNSI | RCATGY | 1 cut(s) | 1822 |
| BstPI | GGTNACC | 1 cut(s) | 970 |
| BstSCI | CCNGG | 3 cut(s) | 135, 1627, 2271 |
| BstSFI | CTRYAG | 1 cut(s) | 1311 |
| BstSLI | GKGCMC | 1 cut(s) | 2696 |
| BstUI | CGCG | 1 cut(s) | 1954 |
| BstV1I | GCAGC | 3 cut(s) | 129, 1029, 1153 |
| BstV2I | GAAGAC | 1 cut(s) | 903 |
| BstX2I | RGATCY | 4 cut(s) | 742, 794, 1808, 2140 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 817, 1987 |
| BstYI | RGATCY | 4 cut(s) | 742, 794, 1808, 2140 |
| Bsu15I | ATCGAT | 1 cut(s) | 2612 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1778 |
| BsuRI | GGCC | 5 cut(s) | 179, 489, 555, 2261, 2636 |
| BsuTUI | ATCGAT | 1 cut(s) | 2612 |
| BtgI | CCRYGG | 1 cut(s) | 2368 |
| BtgZI | GCGATG | 1 cut(s) | 2463 |
| BtrI | CACGTC | 1 cut(s) | 235 |
| BtsI | GCAGTG | 2 cut(s) | 2708, 2726 |
| BtsIMutI | CAGTG | 3 cut(s) | 252, 2708, 2726 |
| Cac8I | GCNNGC | 3 cut(s) | 122, 181, 1820 |
| Cfr13I | GGNCC | 4 cut(s) | 622, 891, 2155, 2634 |
| ClaI | ATCGAT | 1 cut(s) | 2612 |
| Csp6I | GTAC | 7 cut(s) | 220, 329, 960, 1667, 2044, 2084, 2733 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 51, 86 |
| CviAII | CATG | 9 cut(s) | 340, 491, 692, 1021, 1535, 1547, 1819, 2152, 2369 |
| CviQI | GTAC | 7 cut(s) | 220, 329, 960, 1667, 2044, 2084, 2733 |
| DdeI | CTNAG | 8 cut(s) | 6, 263, 951, 1289, 1778, 2039, 2569, 2673 |
| DpnI | GATC | 9 cut(s) | 744, 776, 796, 1025, 1386, 1810, 2142, 2396, 2744 |
| DpnII | GATC | 9 cut(s) | 742, 774, 794, 1023, 1384, 1808, 2140, 2394, 2742 |
| DraI | TTTAAA | 1 cut(s) | 1495 |
| EaeI | YGGCCR | 3 cut(s) | 487, 553, 2259 |
| Eam1104I | CTCTTC | 2 cut(s) | 2280, 2622 |
| EarI | CTCTTC | 2 cut(s) | 2280, 2622 |
| Eco130I | CCWWGG | 2 cut(s) | 1980, 2368 |
| Eco32I | GATATC | 1 cut(s) | 2181 |
| Eco47I | GGWCC | 3 cut(s) | 622, 891, 2155 |
| Eco57I | CTGAAG | 2 cut(s) | 27, 2147 |
| Eco72I | CACGTG | 1 cut(s) | 848 |
| Eco81I | CCTNAGG | 1 cut(s) | 1778 |
| Eco91I | GGTNACC | 1 cut(s) | 970 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 639 |
| EcoO109I | RGGNCCY | 1 cut(s) | 622 |
| EcoO65I | GGTNACC | 1 cut(s) | 970 |
| EcoRI | GAATTC | 1 cut(s) | 2574 |
| EcoRII | CCWGG | 2 cut(s) | 135, 2271 |
| EcoRV | GATATC | 1 cut(s) | 2181 |
| EcoT14I | CCWWGG | 2 cut(s) | 1980, 2368 |
| EcoT22I | ATGCAT | 1 cut(s) | 1536 |
| ErhI | CCWWGG | 2 cut(s) | 1980, 2368 |
| FaeI | CATG | 9 cut(s) | 343, 494, 695, 1024, 1538, 1550, 1822, 2155, 2372 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1392, 1424, 1665, 1697 |
| FatI | CATG | 9 cut(s) | 339, 490, 691, 1020, 1534, 1546, 1818, 2151, 2368 |
| FauI | CCCGC | 1 cut(s) | 1212 |
| Fnu4HI | GCNGC | 4 cut(s) | 118, 487, 1018, 1167 |
| Fsp4HI | GCNGC | 4 cut(s) | 118, 487, 1018, 1167 |
| GluI | GCNGC | 4 cut(s) | 118, 487, 1018, 1167 |
| GsuI | CTGGAG | 3 cut(s) | 50, 1825, 2513 |
| HaeIII | GGCC | 5 cut(s) | 179, 489, 555, 2261, 2636 |
| HapII | CCGG | 3 cut(s) | 348, 1628, 1907 |
| Hin1II | CATG | 9 cut(s) | 343, 494, 695, 1024, 1538, 1550, 1822, 2155, 2372 |
| HincII | GTYRAC | 2 cut(s) | 432, 1679 |
| HindII | GTYRAC | 2 cut(s) | 432, 1679 |
| HinfI | GANTC | 9 cut(s) | 1733, 1754, 1855, 1885, 2148, 2303, 2345, 2381, 2609 |
| HpaI | GTTAAC | 1 cut(s) | 432 |
| HpaII | CCGG | 3 cut(s) | 348, 1628, 1907 |
| HphI | GGTGA | 8 cut(s) | 85, 458, 664, 982, 1139, 1643, 2123, 2312 |
| Hpy166II | GTNNAC | 5 cut(s) | 432, 504, 891, 1679, 1964 |
| Hpy188I | TCNGA | 9 cut(s) | 266, 742, 1230, 1277, 2147, 2254, 2308, 2647, 2674 |
| Hpy8I | GTNNAC | 5 cut(s) | 432, 504, 891, 1679, 1964 |
| Hpy99I | CGWCG | 1 cut(s) | 236 |
| HpyAV | CCTTC | 8 cut(s) | 290, 319, 399, 980, 1667, 2270, 2759, 2785 |
| HpyCH4III | ACNGT | 2 cut(s) | 1463, 2229 |
| HpyCH4IV | ACGT | 6 cut(s) | 234, 331, 847, 1669, 1947, 2596 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 31, 137 |
| HpyF3I | CTNAG | 8 cut(s) | 6, 263, 951, 1289, 1778, 2039, 2569, 2673 |
| HpySE526I | ACGT | 6 cut(s) | 234, 331, 847, 1669, 1947, 2596 |
| Hsp92II | CATG | 9 cut(s) | 343, 494, 695, 1024, 1538, 1550, 1822, 2155, 2372 |
| KspAI | GTTAAC | 1 cut(s) | 432 |
| Kzo9I | GATC | 9 cut(s) | 742, 774, 794, 1023, 1384, 1808, 2140, 2394, 2742 |
| LguI | GCTCTTC | 1 cut(s) | 2280 |
| LmnI | GCTCC | 6 cut(s) | 31, 1118, 1312, 1621, 2169, 2242 |
| Lsp1109I | GCAGC | 3 cut(s) | 129, 1029, 1153 |
| LweI | GCATC | 4 cut(s) | 142, 1900, 2020, 2194 |
| MaeII | ACGT | 6 cut(s) | 234, 331, 847, 1669, 1947, 2596 |
| MaeIII | GTNAC | 8 cut(s) | 169, 313, 602, 700, 864, 970, 1395, 1799 |
| MalI | GATC | 9 cut(s) | 744, 776, 796, 1025, 1386, 1810, 2142, 2396, 2744 |
| MboI | GATC | 9 cut(s) | 742, 774, 794, 1023, 1384, 1808, 2140, 2394, 2742 |
| MfeI | CAATTG | 1 cut(s) | 2829 |
| MflI | RGATCY | 4 cut(s) | 742, 794, 1808, 2140 |
| MhlI | GDGCHC | 3 cut(s) | 952, 2247, 2696 |
| MlyI | GAGTC | 2 cut(s) | 1894, 2390 |
| MmeI | TCCRAC | 2 cut(s) | 798, 1300 |
| Mph1103I | ATGCAT | 1 cut(s) | 1536 |
| MseI | TTAA | 8 cut(s) | 105, 431, 759, 1410, 1494, 1658, 1890, 2001 |
| MslI | CAYNNNNRTG | 6 cut(s) | 20, 63, 696, 2016, 2430, 2657 |
| MspI | CCGG | 3 cut(s) | 348, 1628, 1907 |
| MspR9I | CCNGG | 3 cut(s) | 137, 1629, 2273 |
| MunI | CAATTG | 1 cut(s) | 2829 |
| Mva1269I | GAATGC | 2 cut(s) | 94, 1583 |
| MvaI | CCWGG | 2 cut(s) | 137, 2273 |
| MvnI | CGCG | 1 cut(s) | 1954 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 31, 137 |
| NciI | CCSGG | 1 cut(s) | 1629 |
| NcoI | CCATGG | 1 cut(s) | 2368 |
| NdeII | GATC | 9 cut(s) | 742, 774, 794, 1023, 1384, 1808, 2140, 2394, 2742 |
| NlaIII | CATG | 9 cut(s) | 343, 494, 695, 1024, 1538, 1550, 1822, 2155, 2372 |
| NlaIV | GGNNCC | 7 cut(s) | 623, 744, 796, 1308, 2171, 2374, 2693 |
| NmeAIII | GCCGAG | 2 cut(s) | 181, 581 |
| NmuCI | GTSAC | 3 cut(s) | 169, 970, 1395 |
| NsiI | ATGCAT | 1 cut(s) | 1536 |
| NspI | RCATGY | 1 cut(s) | 1822 |
| NspV | TTCGAA | 1 cut(s) | 2607 |
| PaeI | GCATGC | 1 cut(s) | 1822 |
| PciSI | GCTCTTC | 1 cut(s) | 2280 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 228, 2609, 2781 |
| PctI | GAATGC | 2 cut(s) | 94, 1583 |
| PfeI | GAWTC | 7 cut(s) | 1733, 1754, 1855, 2148, 2303, 2345, 2609 |
| Pfl23II | CGTACG | 1 cut(s) | 219 |
| PfoI | TCCNGGA | 1 cut(s) | 2271 |
| PkrI | GCNGC | 4 cut(s) | 119, 488, 1019, 1168 |
| PleI | GAGTC | 2 cut(s) | 1893, 2389 |
| PmaCI | CACGTG | 1 cut(s) | 848 |
| PmlI | CACGTG | 1 cut(s) | 848 |
| PpsI | GAGTC | 2 cut(s) | 1893, 2389 |
| Ppu21I | YACGTR | 2 cut(s) | 848, 1670 |
| PpuMI | RGGWCCY | 1 cut(s) | 622 |
| PsiI | TTATAA | 1 cut(s) | 1638 |
| Psp5II | RGGWCCY | 1 cut(s) | 622 |
| Psp6I | CCWGG | 2 cut(s) | 135, 2271 |
| PspCI | CACGTG | 1 cut(s) | 848 |
| PspEI | GGTNACC | 1 cut(s) | 970 |
| PspGI | CCWGG | 2 cut(s) | 135, 2271 |
| PspLI | CGTACG | 1 cut(s) | 219 |
| PspN4I | GGNNCC | 7 cut(s) | 623, 744, 796, 1308, 2171, 2374, 2693 |
| PspPI | GGNCC | 4 cut(s) | 622, 891, 2155, 2634 |
| PspPPI | RGGWCCY | 1 cut(s) | 622 |
| PstI | CTGCAG | 1 cut(s) | 1315 |
| PsuI | RGATCY | 4 cut(s) | 742, 794, 1808, 2140 |
| RsaI | GTAC | 7 cut(s) | 221, 330, 961, 1668, 2045, 2085, 2734 |
| RsaNI | GTAC | 7 cut(s) | 220, 329, 960, 1667, 2044, 2084, 2733 |
| RseI | CAYNNNNRTG | 6 cut(s) | 20, 63, 696, 2016, 2430, 2657 |
| SapI | GCTCTTC | 1 cut(s) | 2280 |
| SaqAI | TTAA | 8 cut(s) | 105, 431, 759, 1410, 1494, 1658, 1890, 2001 |
| SatI | GCNGC | 4 cut(s) | 118, 487, 1018, 1167 |
| Sau3AI | GATC | 9 cut(s) | 742, 774, 794, 1023, 1384, 1808, 2140, 2394, 2742 |
| Sau96I | GGNCC | 4 cut(s) | 622, 891, 2155, 2634 |
| ScaI | AGTACT | 1 cut(s) | 2085 |
| SchI | GAGTC | 2 cut(s) | 1894, 2390 |
| ScrFI | CCNGG | 3 cut(s) | 137, 1629, 2273 |
| SduI | GDGCHC | 3 cut(s) | 952, 2247, 2696 |
| SfaNI | GCATC | 4 cut(s) | 142, 1900, 2020, 2194 |
| SfcI | CTRYAG | 1 cut(s) | 1311 |
| SfuI | TTCGAA | 1 cut(s) | 2607 |
| SinI | GGWCC | 3 cut(s) | 622, 891, 2155 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 20, 63, 696, 2016, 2430, 2657 |
| SmlI | CTYRAG | 1 cut(s) | 146 |
| SmoI | CTYRAG | 1 cut(s) | 146 |
| SphI | GCATGC | 1 cut(s) | 1822 |
| SsiI | CCGC | 5 cut(s) | 275, 486, 1219, 1474, 1954 |
| SspI | AATATT | 1 cut(s) | 1344 |
| StyD4I | CCNGG | 3 cut(s) | 135, 1627, 2271 |
| StyI | CCWWGG | 2 cut(s) | 1980, 2368 |
| TaaI | ACNGT | 2 cut(s) | 1463, 2229 |
| TaiI | ACGT | 6 cut(s) | 237, 334, 850, 1672, 1950, 2599 |
| TaqI | TCGA | 5 cut(s) | 437, 534, 2430, 2607, 2612 |
| TaqII | GACCGA | 1 cut(s) | 908 |
| TatI | WGTACW | 2 cut(s) | 959, 2083 |
| TauI | GCSGC | 1 cut(s) | 489 |
| TfiI | GAWTC | 7 cut(s) | 1733, 1754, 1855, 2148, 2303, 2345, 2609 |
| Tru1I | TTAA | 8 cut(s) | 105, 431, 759, 1410, 1494, 1658, 1890, 2001 |
| Tru9I | TTAA | 8 cut(s) | 105, 431, 759, 1410, 1494, 1658, 1890, 2001 |
| TscAI | CASTG | 3 cut(s) | 259, 2715, 2733 |
| TseFI | GTSAC | 3 cut(s) | 169, 970, 1395 |
| TseI | GCWGC | 3 cut(s) | 117, 1017, 1166 |
| Tsp45I | GTSAC | 3 cut(s) | 169, 970, 1395 |
| TspRI | CASTG | 3 cut(s) | 259, 2715, 2733 |
| VpaK11BI | GGWCC | 3 cut(s) | 622, 891, 2155 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 639 |
| XapI | RAATTY | 9 cut(s) | 574, 822, 916, 1789, 1873, 2338, 2487, 2534, 2574 |
| XbaI | TCTAGA | 3 cut(s) | 787, 877, 2183 |
| XceI | RCATGY | 1 cut(s) | 1822 |
| ZrmI | AGTACT | 1 cut(s) | 2085 |
| Zsp2I | ATGCAT | 1 cut(s) | 1536 |