FvH4_5g33290

disease resistance protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Reverse (-)
24075097 .. 24080515
5419 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g33290.t1

Sequence Viewer

Length: 3003 bp
ATGGCCGAGGGACTTGTCTCCGCGCTTCTGGAACAACTGGTTTCAGTAGTGTTCGAGCACACAAAAGAAGCTGTGACACTGGTTCTGAATGCAAAGAAAGATGTCAAGAAATTCAGTAGACATCTCACAACAATTCAAGCTGCGCTAGAGGATGCCGAGCAGCAGCAGGTTATGAAGGCTAGCGTGAGAGACTGGTTGGATCGGCTCAAAGATGTGTCGTACGAGATGGACAATTTGCTGGATGAGTGGAACACTGAAATTCTGAAACAACAAGTGGAGAAGCAACTTAAGGAAGGTGAAATGAATGCTGTTGTTACTAAGAAGAAGGTACGCTTCTCAGTTGTCTCCAACTTGTGCTGTTTTGGCCAAGTCAACAAGGCAATTTATTATCATAAAATTGCATCTGGGATAAAAGATCTCAATCAAGATTTAGCTTTGATTGTTTCTGAAACAGAAGAGTTTGGCTTTCTTCAATCCTCTGTTTCAACTCAGGAAAATCTAAATCAACCGCTGCAAACTTCATCATTTATCGATAGATCTACGATAATTGGTAGAAAAGAAGTAACCAGTAATCTTTTGAGCAAGTTGTTGGGGGAGAGTGGTCAAGAAGAGAAGGAGCTCCGTCTAATCCCTATTGTAGGGATGGGAGGGATAGGGAAAACAACTCTCGCCCAATTAGCTTATAATAATGAAAATGTTGAAAAACATTTTGGTAAGAGAATATGGGTTTGTGTCTCAGACCCTTTTGAGGAGTTGAAGATTGCCAAGGCCATTATTACTGGCAGTGGCAGTAATAAAACCCCAAACTCAGACGAAATGCAAGACGTCTTGCAATGTATGTCTGATTCTCTTAAGGGAAATAAGGTCCTCATTGTCCTGGATGATGTGTGGACAGAAGACCGAGGAAAGTGGGCAAATCTAAAATTACCAGTAATAATGCAGAGTTGTGCAAAAGGTAGTAGATTATTGGTGACGACGCGGAGTGAGGGAGTTGCTAGGATGATGAGAGCAACCACTCACATGATCCAAGTAAAGAAACTGAGTCATGAAAAGTGTTTGGCGTTGTTCAACAACATTGCATATTTGGGAAGGGAAGAATATGAGGCTGATAGATTTCGAGCTATAGGTGAGAAAATTGTGAGGAAGTGTGATGGCTTGCCGCTTGCTGCAGTATGTTTAGGTGCCCTCATGCAGTATAAAAAGACTATGGGAGAATGGCTAGAGGTTTTGGATAGTAAGATATGGGATGAAGTAGTTGTTGATCAAGTTTTTCGTCCACTTTTACTGAGCTATTATGGTTTGGGTCCAGTAGTCAAGCGTTGCCTTTTATACGGTGCCATATTTCCAAAAGATTATCGGTTTAACAAACACACTCTGATTGAGTTGTGGATGTCACAAGATTATCTTAGTGGAAAAGATTATAAAGAAAAGGAAAAAAGAGGTCAACATGTTTTTGATACCTTAGTAATGCGATCATTTTTTCAGGATGTTGAGGTAGGCGAACGGTCTAGATATGATGAGCAGATTACTACATTCTGTAAAATGCATGATATTGTACATGACCTTGTTCAATTCCTCAATAAAAATGAATGCTTTACAATAGAGCCTGTAAAAACAAATGCAATAATAACGAAACTAACTGAGGAGGTCCGTCATTTGACGTTATTGTTTGCACCCTTTGATTCTCCACTTTCGGATTTGATTTCAGCTGTGAATTGCAAGAAGTTACGTACTCTTGCCACTTTTGATTCAAGTATTAGTTGCATAGAATCAAAGGACATTTCACAGTTGAAATGTGTGAGGACGTTAATTTTGAGCTCTAACGACATTAAAGAGCTCCCAGAGGAGATGGGTGAGCTAGTACATCTGAGGTACGTTGATTTGTCTGAAAATAAGAGTTTGGAGAAACTACCAAACAGTCTATGCAACTTGTACAATTTGCGAACCTTGCGCCTTGTTAGGTGCAAGGAGCTTAAGAAACTGCCAGAAAATATGGGAAGCTTAATTAGTTTAACACATCTTCATCTTGAGGGTTCTGGGGTGAAGTACTTGCCAATAGGTATCGGGAGATTAACAAGTCTGCAAACACTAGACGTGTGTTCTGTTTATGCTAGTGACATTGTTGAAGTTTTTGGAAGATTGGACAGGCTTCAAGGTAGTCTCACCATAAACATTTTGGGAGATCGGGAGAATTCAAGTGATGCGGAGGAGGAGAAGGAGTACATGTGCAATAAAGAAAAGCTTCTTCATTTGACCTTAAACTTTCAGGATGTGGACGAGGAGGACGACAGTGGCCAGAGAAGGAGATCAAGCAATGCAGAAACAGTACTGAGGGGGTTGCGACCACATGAAAATCTGGCAACTCTGAGCATTAGTGGGTGGAAAGGCATCACCTGGCCCAGTTGGTTTAAGCGGCTAGAGAATTTGAGATTCCTCAGTCTGACGAGTTGTGGTGAGTGTGAACATTTGCCTGCTCTTGGGAAATTGCCGATCCTTGAAGAAATAACAATAGAGGGGATGCTGAAAGTGAAGACGGTTGGAGATGAATTTTTGGGAATAGCAGAGACCTCTAGTCAGCAATCTTCATCAACACCATCCTCATCCTCGTGTATTCTTTTCCCAAAACTGGAGAAACTCCACTTTGGAAACATGGACAAGTTGGAGCATTGGGAAGGAGTTGGAGGGTTGGAAGAAAACAGTTCTGAAATTACAATGATGCCGCGCCTTTCATCACTTCAAATTCACTACTGCATGGAGCTCAGGAACTTGCCAGCCTTCTTGCGGAATAGATCAGCGCTAGCTATTGACCTTATAAACTGTGACACATTGAGGTCGGATGATCTCCCTGCGTATTGTGAAATCGTCCGGTTAGGGGATGATATGCATAGGCTTATCAACTCAGTGGAAGCTGAAGTAGATGTTGAGAATCTCAAACTTGTTTTGTCAGACGCCAACATATCACTTCTGTCTGAACTGAGGATCTTGTTTGCATACCTGACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1001

Amino Acids

113.25

Weight (kDa)

5.68

Isoelectric Point (pI)

47.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 96 4.8e-19 Rx N-terminal domain
NB-ARC PF00931 203 - 361 4.2e-32 NB-ARC domain
WHD_DRP PF23559 447 - 523 1.6e-21 Disease resistance protein Winged helix domain
LRR_14 PF23598 575 - 913 1.7e-29 Leucine-rich repeat region
LRR_8 PF13855 600 - 655 6.6e-06 Leucine rich repeat
LRR_R13L1-DRL21 PF25019 712 - 840 9.1e-27 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 684, 1422, 2813
AatII GACGTC 1 cut(s) 828
Acc36I ACCTGC 1 cut(s) 157
AccB1I GGYRCC 2 cut(s) 1181, 1334
AccI GTMKAC 1 cut(s) 118
AccII CGCG 3 cut(s) 23, 979, 2722
AciI CCGC 8 cut(s) 21, 509, 979, 1160, 2204, 2413, 2720, 2782
AclWI GGATC 4 cut(s) 207, 1018, 2485, 2987
AcoI YGGCCR 3 cut(s) 3, 364, 2293
AcsI RAATTY 6 cut(s) 110, 258, 2191, 2422, 2546, 2739
AcuI CTGAAG 1 cut(s) 2931
AcyI GRCGYC 2 cut(s) 825, 2949
AfeI AGCGCT 1 cut(s) 2796
AfiI CCNNNNNNNGG 6 cut(s) 638, 748, 2477, 2626, 2781, 2872
AflII CTTAAG 3 cut(s) 287, 851, 1973
AflIII ACRYGT 3 cut(s) 1447, 2094, 2223
AhdI GACNNNNNGTC 1 cut(s) 2571
AjiI CACGTC 1 cut(s) 2095
AjnI CCWGG 2 cut(s) 876, 2393
AjuI GAANNNNNNNTTGG 2 cut(s) 693, 725
Alw21I GWGCWC 5 cut(s) 60, 621, 1820, 1839, 2760
Alw26I GTCTC 6 cut(s) 22, 183, 349, 739, 2165, 2558
AlwI GGATC 4 cut(s) 207, 1018, 2485, 2987
Aor51HI AGCGCT 1 cut(s) 2796
AoxI GGCC 5 cut(s) 3, 364, 768, 2293, 2396
ApeKI GCWGC 5 cut(s) 140, 160, 163, 511, 1166
ApoI RAATTY 6 cut(s) 110, 258, 2191, 2422, 2546, 2739
ArsI GACNNNNNNTTYG 2 cut(s) 1795, 1827
Asp700I GAANNNNTTC 1 cut(s) 2241
AspLEI GCGC 5 cut(s) 25, 145, 1953, 2724, 2797
AspS9I GGNCC 4 cut(s) 865, 1304, 1648, 2397
AsuHPI GGTGA 8 cut(s) 308, 982, 1139, 1865, 2053, 2155, 2383, 2465
AsuNHI GCTAGC 2 cut(s) 179, 2797
AvaII GGWCC 3 cut(s) 865, 1304, 1648
BaeGI GKGCMC 1 cut(s) 1186
BaeI ACNNNNGTAYC 2 cut(s) 1449, 1482
BalI TGGCCA 2 cut(s) 366, 2295
BanI GGYRCC 2 cut(s) 1181, 1334
BanII GRGCYC 4 cut(s) 621, 1820, 1839, 2760
BauI CACGAG 1 cut(s) 2605
BbsI GAAGAC 2 cut(s) 903, 2537
Bbv12I GWGCWC 5 cut(s) 60, 621, 1820, 1839, 2760
BbvI GCAGC 5 cut(s) 127, 172, 175, 498, 1153
BccI CCATC 5 cut(s) 220, 637, 1145, 1843, 2602
BciT130I CCWGG 2 cut(s) 878, 2395
BclI TGATCA 1 cut(s) 1261
BcoDI GTCTC 6 cut(s) 22, 183, 349, 739, 2165, 2558
BfmI CTRYAG 2 cut(s) 1122, 1167
BfoI RGCGCY 1 cut(s) 2798
BfrI CTTAAG 3 cut(s) 287, 851, 1973
BfuAI ACCTGC 1 cut(s) 157
BglII AGATCT 2 cut(s) 415, 536
BisI GCNGC 8 cut(s) 141, 161, 164, 512, 1160, 1167, 2414, 2720
BlsI GCNGC 8 cut(s) 142, 162, 165, 513, 1161, 1168, 2415, 2721
BmcAI AGTACT 2 cut(s) 2048, 2328
Bme1390I CCNGG 2 cut(s) 878, 2395
Bme18I GGWCC 3 cut(s) 865, 1304, 1648
BmeRI GACNNNNNGTC 1 cut(s) 2571
BmgBI CACGTC 1 cut(s) 2095
BmgT120I GGNCC 4 cut(s) 865, 1304, 1648, 2397
BmiI GGNNCC 3 cut(s) 1183, 1305, 1336
BmrFI CCNGG 2 cut(s) 878, 2395
BmrI ACTGGG 1 cut(s) 2394
BmsI GCATC 6 cut(s) 142, 410, 2191, 2397, 2508, 2706
BmtI GCTAGC 2 cut(s) 183, 2801
BmuI ACTGGG 1 cut(s) 2394
BpiI GAAGAC 2 cut(s) 903, 2537
BpmI CTGGAG 1 cut(s) 2648
Bpu10I CCTNAGC 1 cut(s) 2759
BpuEI CTTGAG 1 cut(s) 2048
Bsa29I ATCGAT 1 cut(s) 531
BsaAI YACGTR 1 cut(s) 1730
BsaBI GATNNNNATC 1 cut(s) 420
BsaHI GRCGYC 2 cut(s) 825, 2949
BsaI GGTCTC 1 cut(s) 2558
BsaJI CCNNGG 3 cut(s) 6, 765, 901
BsaWI WCCGGW 1 cut(s) 2865
BsaXI ACNNNNNCTCC 4 cut(s) 2204, 2210, 2234, 2240
Bsc4I CCNNNNNNNGG 6 cut(s) 638, 748, 2477, 2626, 2781, 2872
Bse1I ACTGG 9 cut(s) 42, 84, 197, 567, 784, 929, 1307, 2400, 2631
Bse3DI GCAATG 3 cut(s) 839, 1074, 2320
Bse8I GATNNNNATC 1 cut(s) 420
BseBI CCWGG 2 cut(s) 878, 2395
BseCI ATCGAT 1 cut(s) 531
BseDI CCNNGG 3 cut(s) 6, 765, 901
BseJI GATNNNNATC 1 cut(s) 420
BseLI CCNNNNNNNGG 6 cut(s) 638, 748, 2477, 2626, 2781, 2872
BseMI GCAATG 3 cut(s) 839, 1074, 2320
BseNI ACTGG 9 cut(s) 42, 84, 197, 567, 784, 929, 1307, 2400, 2631
BseRI GAGGAG 6 cut(s) 764, 1658, 1859, 2222, 2225, 2294
BseSI GKGCMC 1 cut(s) 1186
BseXI GCAGC 5 cut(s) 127, 172, 175, 498, 1153
Bsh1236I CGCG 3 cut(s) 23, 979, 2722
BshFI GGCC 5 cut(s) 5, 366, 770, 2295, 2398
BshNI GGYRCC 2 cut(s) 1181, 1334
BshVI ATCGAT 1 cut(s) 531
BsiHKAI GWGCWC 5 cut(s) 60, 621, 1820, 1839, 2760
BsiSI CCGG 1 cut(s) 2866
BsiWI CGTACG 1 cut(s) 219
BslFI GGGAC 1 cut(s) 24
BslI CCNNNNNNNGG 6 cut(s) 638, 748, 2477, 2626, 2781, 2872
BsmAI GTCTC 6 cut(s) 22, 183, 349, 739, 2165, 2558
BsmFI GGGAC 1 cut(s) 24
BsmI GAATGC 3 cut(s) 94, 310, 1595
BsnI GGCC 5 cut(s) 5, 366, 770, 2295, 2398
Bso31I GGTCTC 1 cut(s) 2558
Bsp1286I GDGCHC 6 cut(s) 60, 621, 1186, 1820, 1839, 2760
Bsp1407I TGTACA 2 cut(s) 1555, 1932
BspACI CCGC 8 cut(s) 21, 509, 979, 1160, 2204, 2413, 2720, 2782
BspANI GGCC 5 cut(s) 5, 366, 770, 2295, 2398
BspDI ATCGAT 1 cut(s) 531
BspFNI CGCG 3 cut(s) 23, 979, 2722
BspHI TCATGA 1 cut(s) 1045
BspLI GGNNCC 3 cut(s) 1183, 1305, 1336
BspMAI CTGCAG 1 cut(s) 1171
BspMI ACCTGC 1 cut(s) 157
BspOI GCTAGC 2 cut(s) 183, 2801
BspPI GGATC 4 cut(s) 207, 1018, 2485, 2987
BspT107I GGYRCC 2 cut(s) 1181, 1334
BspTI CTTAAG 3 cut(s) 287, 851, 1973
BspTNI GGTCTC 1 cut(s) 2558
BsrDI GCAATG 3 cut(s) 839, 1074, 2320
BsrGI TGTACA 2 cut(s) 1555, 1932
BsrI ACTGG 9 cut(s) 42, 84, 197, 567, 784, 929, 1307, 2400, 2631
BssECI CCNNGG 3 cut(s) 6, 765, 901
BssNI GRCGYC 2 cut(s) 825, 2949
BssSI CACGAG 1 cut(s) 2605
BssT1I CCWWGG 1 cut(s) 765
Bst2BI CACGAG 1 cut(s) 2605
Bst2UI CCWGG 2 cut(s) 878, 2395
Bst4CI ACNGT 9 cut(s) 1334, 1506, 1788, 1919, 2291, 2326, 2536, 2699, 2819
Bst6I CTCTTC 2 cut(s) 450, 603
BstACI GRCGYC 2 cut(s) 825, 2949
BstAFI CTTAAG 3 cut(s) 287, 851, 1973
BstAUI TGTACA 2 cut(s) 1555, 1932
BstBAI YACGTR 1 cut(s) 1730
BstC8I GCNNGC 6 cut(s) 181, 1157, 1164, 2472, 2772, 2799
BstENI CCTNNNNNAGG 1 cut(s) 636
BstFNI CGCG 3 cut(s) 23, 979, 2722
BstH2I RGCGCY 1 cut(s) 2798
BstHHI GCGC 5 cut(s) 25, 145, 1953, 2724, 2797
BstMAI GTCTC 6 cut(s) 22, 183, 349, 739, 2165, 2558
BstMWI GCNNNNNNNGC 3 cut(s) 363, 677, 1948
BstNI CCWGG 2 cut(s) 878, 2395
BstNSI RCATGY 2 cut(s) 1451, 2227
BstSCI CCNGG 2 cut(s) 876, 2393
BstSFI CTRYAG 2 cut(s) 1122, 1167
BstSLI GKGCMC 1 cut(s) 1186
BstSNI TACGTA 1 cut(s) 1730
BstUI CGCG 3 cut(s) 23, 979, 2722
BstV1I GCAGC 5 cut(s) 127, 172, 175, 498, 1153
BstV2I GAAGAC 2 cut(s) 903, 2537
BstX2I RGATCY 3 cut(s) 415, 536, 2979
BstYI RGATCY 3 cut(s) 415, 536, 2979
Bsu15I ATCGAT 1 cut(s) 531
BsuRI GGCC 5 cut(s) 5, 366, 770, 2295, 2398
BsuTUI ATCGAT 1 cut(s) 531
BtrI CACGTC 1 cut(s) 2095
BtsI GCAGTG 1 cut(s) 790
BtsIMutI CAGTG 5 cut(s) 77, 252, 790, 2296, 2907
BveI ACCTGC 1 cut(s) 157
Cac8I GCNNGC 6 cut(s) 181, 1157, 1164, 2472, 2772, 2799
CciI TCATGA 1 cut(s) 1045
CfoI GCGC 5 cut(s) 25, 145, 1953, 2724, 2797
Cfr13I GGNCC 4 cut(s) 865, 1304, 1648, 2397
ClaI ATCGAT 1 cut(s) 531
CseI GACGC 2 cut(s) 985, 2957
DriI GACNNNNNGTC 1 cut(s) 2571
EaeI YGGCCR 3 cut(s) 3, 364, 2293
Eam1104I CTCTTC 2 cut(s) 450, 603
Eam1105I GACNNNNNGTC 1 cut(s) 2571
EarI CTCTTC 2 cut(s) 450, 603
Ecl136II GAGCTC 4 cut(s) 619, 1818, 1837, 2758
Eco105I TACGTA 1 cut(s) 1730
Eco130I CCWWGG 1 cut(s) 765
Eco24I GRGCYC 4 cut(s) 621, 1820, 1839, 2760
Eco31I GGTCTC 1 cut(s) 2558
Eco47I GGWCC 3 cut(s) 865, 1304, 1648
Eco47III AGCGCT 1 cut(s) 2796
Eco53kI GAGCTC 4 cut(s) 619, 1818, 1837, 2758
Eco57I CTGAAG 1 cut(s) 2931
EcoICRI GAGCTC 4 cut(s) 619, 1818, 1837, 2758
EcoNI CCTNNNNNAGG 1 cut(s) 636
EcoO109I RGGNCCY 1 cut(s) 865
EcoRI GAATTC 1 cut(s) 2191
EcoRII CCWGG 2 cut(s) 876, 2393
EcoT14I CCWWGG 1 cut(s) 765
EcoT22I ATGCAT 2 cut(s) 1548, 2886
EcoT38I GRGCYC 4 cut(s) 621, 1820, 1839, 2760
ErhI CCWWGG 1 cut(s) 765
FalI AAGNNNNNCTT 6 cut(s) 317, 349, 1389, 1421, 2226, 2258
FaqI GGGAC 1 cut(s) 24
FbaI TGATCA 1 cut(s) 1261
FblI GTMKAC 1 cut(s) 118
Fnu4HI GCNGC 8 cut(s) 141, 161, 164, 512, 1160, 1167, 2414, 2720
FriOI GRGCYC 4 cut(s) 621, 1820, 1839, 2760
Fsp4HI GCNGC 8 cut(s) 141, 161, 164, 512, 1160, 1167, 2414, 2720
GlaI GCGC 5 cut(s) 24, 144, 1952, 2723, 2796
GluI GCNGC 8 cut(s) 141, 161, 164, 512, 1160, 1167, 2414, 2720
GsuI CTGGAG 1 cut(s) 2648
HaeII RGCGCY 1 cut(s) 2798
HaeIII GGCC 5 cut(s) 5, 366, 770, 2295, 2398
HapII CCGG 1 cut(s) 2866
HgaI GACGC 2 cut(s) 985, 2957
HhaI GCGC 5 cut(s) 25, 145, 1953, 2724, 2797
Hin1I GRCGYC 2 cut(s) 825, 2949
Hin6I GCGC 5 cut(s) 23, 143, 1951, 2722, 2795
HinP1I GCGC 5 cut(s) 23, 143, 1951, 2722, 2795
HincII GTYRAC 2 cut(s) 373, 1445
HindII GTYRAC 2 cut(s) 373, 1445
HindIII AAGCTT 2 cut(s) 1999, 2240
HinfI GANTC 7 cut(s) 845, 1042, 1682, 1748, 1769, 2430, 2926
HpaII CCGG 1 cut(s) 2866
HphI GGTGA 8 cut(s) 308, 982, 1139, 1865, 2053, 2155, 2383, 2465
Hpy166II GTNNAC 7 cut(s) 119, 373, 891, 1277, 1445, 2275, 2462
Hpy8I GTNNAC 7 cut(s) 119, 373, 891, 1277, 1445, 2275, 2462
Hpy99I CGWCG 1 cut(s) 979
HpyAV CCTTC 9 cut(s) 169, 287, 319, 607, 1083, 2209, 2295, 2666, 2785
HpyCH4III ACNGT 9 cut(s) 1334, 1506, 1788, 1919, 2291, 2326, 2536, 2699, 2819
HpyCH4IV ACGT 6 cut(s) 825, 1661, 1729, 1805, 1875, 2094
HpyF10VI GCNNNNNNNGC 3 cut(s) 363, 677, 1948
HpySE526I ACGT 6 cut(s) 825, 1661, 1729, 1805, 1875, 2094
Hsp92I GRCGYC 2 cut(s) 825, 2949
HspAI GCGC 5 cut(s) 23, 143, 1951, 2722, 2795
Ksp22I TGATCA 1 cut(s) 1261
LmnI GCTCC 6 cut(s) 616, 624, 1842, 1969, 2662, 2755
Lsp1109I GCAGC 5 cut(s) 127, 172, 175, 498, 1153
LweI GCATC 6 cut(s) 142, 410, 2191, 2397, 2508, 2706
MaeII ACGT 6 cut(s) 825, 1661, 1729, 1805, 1875, 2094
MaeIII GTNAC 8 cut(s) 73, 313, 562, 970, 1392, 1725, 2114, 2819
MflI RGATCY 3 cut(s) 415, 536, 2979
MhlI GDGCHC 6 cut(s) 60, 621, 1186, 1820, 1839, 2760
MlsI TGGCCA 2 cut(s) 366, 2295
MluNI TGGCCA 2 cut(s) 366, 2295
MlyI GAGTC 1 cut(s) 1051
MmeI TCCRAC 7 cut(s) 177, 372, 2518, 2640, 2659, 2667, 2814
Mox20I TGGCCA 2 cut(s) 366, 2295
Mph1103I ATGCAT 2 cut(s) 1548, 2886
MroXI GAANNNNTTC 1 cut(s) 2241
MscI TGGCCA 2 cut(s) 366, 2295
MslI CAYNNNNRTG 2 cut(s) 1019, 2605
Msp20I TGGCCA 2 cut(s) 366, 2295
MspA1I CMGCKG 2 cut(s) 511, 1709
MspCI CTTAAG 3 cut(s) 287, 851, 1973
MspI CCGG 1 cut(s) 2866
MspR9I CCNGG 2 cut(s) 878, 2395
Mva1269I GAATGC 3 cut(s) 94, 310, 1595
MvaI CCWGG 2 cut(s) 878, 2395
MvnI CGCG 3 cut(s) 23, 979, 2722
MwoI GCNNNNNNNGC 3 cut(s) 363, 677, 1948
NheI GCTAGC 2 cut(s) 179, 2797
NlaIV GGNNCC 3 cut(s) 1183, 1305, 1336
NmeAIII GCCGAG 2 cut(s) 31, 181
NmuCI GTSAC 5 cut(s) 73, 970, 1392, 2114, 2819
NsiI ATGCAT 2 cut(s) 1548, 2886
NspI RCATGY 2 cut(s) 1451, 2227
PagI TCATGA 1 cut(s) 1045
PciI ACATGT 2 cut(s) 1447, 2223
PcsI WCGNNNNNNNCGW 1 cut(s) 2283
PctI GAATGC 3 cut(s) 94, 310, 1595
PdmI GAANNNNTTC 1 cut(s) 2241
PfeI GAWTC 6 cut(s) 845, 1682, 1748, 1769, 2430, 2926
Pfl23II CGTACG 1 cut(s) 219
PfoI TCCNGGA 1 cut(s) 876
PkrI GCNGC 8 cut(s) 142, 162, 165, 513, 1161, 1168, 2415, 2721
PleI GAGTC 1 cut(s) 1050
PpsI GAGTC 1 cut(s) 1050
Ppu21I YACGTR 1 cut(s) 1730
PpuMI RGGWCCY 1 cut(s) 865
PscI ACATGT 2 cut(s) 1447, 2223
PsiI TTATAA 3 cut(s) 684, 1422, 2813
Psp124BI GAGCTC 4 cut(s) 621, 1820, 1839, 2760
Psp5II RGGWCCY 1 cut(s) 865
Psp6I CCWGG 2 cut(s) 876, 2393
PspGI CCWGG 2 cut(s) 876, 2393
PspLI CGTACG 1 cut(s) 219
PspN4I GGNNCC 3 cut(s) 1183, 1305, 1336
PspPI GGNCC 4 cut(s) 865, 1304, 1648, 2397
PspPPI RGGWCCY 1 cut(s) 865
PstI CTGCAG 1 cut(s) 1171
PsuI RGATCY 3 cut(s) 415, 536, 2979
PvuII CAGCTG 1 cut(s) 1709
RseI CAYNNNNRTG 2 cut(s) 1019, 2605
SacI GAGCTC 4 cut(s) 621, 1820, 1839, 2760
SatI GCNGC 8 cut(s) 141, 161, 164, 512, 1160, 1167, 2414, 2720
Sau96I GGNCC 4 cut(s) 865, 1304, 1648, 2397
ScaI AGTACT 2 cut(s) 2048, 2328
SchI GAGTC 1 cut(s) 1051
ScrFI CCNGG 2 cut(s) 878, 2395
SduI GDGCHC 6 cut(s) 60, 621, 1186, 1820, 1839, 2760
SfaNI GCATC 6 cut(s) 142, 410, 2191, 2397, 2508, 2706
SfcI CTRYAG 2 cut(s) 1122, 1167
SinI GGWCC 3 cut(s) 865, 1304, 1648
SmiMI CAYNNNNRTG 2 cut(s) 1019, 2605
SmlI CTYRAG 4 cut(s) 287, 851, 1973, 2027
SmoI CTYRAG 4 cut(s) 287, 851, 1973, 2027
SnaBI TACGTA 1 cut(s) 1730
SsiI CCGC 8 cut(s) 21, 509, 979, 1160, 2204, 2413, 2720, 2782
SstI GAGCTC 4 cut(s) 621, 1820, 1839, 2760
StyD4I CCNGG 2 cut(s) 876, 2393
StyI CCWWGG 1 cut(s) 765
TaaI ACNGT 9 cut(s) 1334, 1506, 1788, 1919, 2291, 2326, 2536, 2699, 2819
TaiI ACGT 6 cut(s) 828, 1664, 1732, 1808, 1878, 2097
TaqI TCGA 3 cut(s) 54, 531, 1117
TaqII GACCGA 1 cut(s) 915
TatI WGTACW 6 cut(s) 1555, 1861, 1932, 2046, 2220, 2326
TauI GCSGC 3 cut(s) 1162, 2416, 2722
TfiI GAWTC 6 cut(s) 845, 1682, 1748, 1769, 2430, 2926
TscAI CASTG 5 cut(s) 84, 259, 790, 2296, 2907
TseFI GTSAC 5 cut(s) 73, 970, 1392, 2114, 2819
TseI GCWGC 5 cut(s) 140, 160, 163, 511, 1166
Tsp45I GTSAC 5 cut(s) 73, 970, 1392, 2114, 2819
TspGWI ACGGA 2 cut(s) 611, 1640
TspRI CASTG 5 cut(s) 84, 259, 790, 2296, 2907
Vha464I CTTAAG 3 cut(s) 287, 851, 1973
VpaK11BI GGWCC 3 cut(s) 865, 1304, 1648
XagI CCTNNNNNAGG 1 cut(s) 636
XapI RAATTY 6 cut(s) 110, 258, 2191, 2422, 2546, 2739
XbaI TCTAGA 1 cut(s) 1508
XceI RCATGY 2 cut(s) 1451, 2227
XcmI CCANNNNNNNNNTGG 1 cut(s) 2173
XmiI GTMKAC 1 cut(s) 118
XmnI GAANNNNTTC 1 cut(s) 2241
ZraI GACGTC 1 cut(s) 826
ZrmI AGTACT 2 cut(s) 2048, 2328
Zsp2I ATGCAT 2 cut(s) 1548, 2886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.