Rorug02G0300600

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
33531328 .. 33548589
17262 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0300600.1

Sequence Viewer

Length: 3054 bp
ATGTCAGGAACTTCACTAGAACTTTGGGTGCTAGTTTGGGGCAGCTGCAGCTTCATCTTCATCTTTGGTTTTGCTGACATAGCAGAAGCTCAGGCCACCACATATCCTTCTGAAGCGCGAGCTCTGAGTTCAATCTTCCAGCAATGGCAGATTGAGGCCAAATGGAACAAAACCAGAGATCCATGCAGTGGAGCGGCCATTGACGACTCCATCGACTTCGGCAACGAAGCTTACAACCCTTTGGCCAAATGCAACTGTTCAAACTCCGCTTGCCACATTACCCAACTGAAAGTTTCTACATTGGAGGTTGTTGGCGTAATTCCGGAACAGCTATGGACTCTGAAGTTTCTCACTCATCTCGATTTAGGTCACAATCACTTGACAGGACCTCTCTCTGCATCAATTGGAAATCTGAGCAGCTTGCAATATTTGAGCTTAGGCCATAACATGTTGTCAGGCCAGCTACCAAAGGAACTCGGAAATCTCTCTAATTTGACATTCTTGGCTATTGGGACTATGAACTTTTCCGGTGGTCTACCACATGAGCTAGGGAATTTATTAAATTTACAACAGATTTACTTGGATAGTTCTGGAGTTAGCGGTGAGATTCCACCGACGTTTGCTAATCTACGAAACTTGACCATATTCCGGGTGTCAGACACAGAACTCTCTGGCAGGATACCTGACTTCGTAGGATATTGGTCAAAGCTTACTTCCTTGGTATTTCAAGGGAACTCTTTTGAAGGTCCTATACCAGCTACACTGTCCAATCTGACTTCTCTTGAGGAGCTGAGAATTAGTGATATAATATCTACTGCCAGTGGGAACTCTTCTCTTGGATTTATTAAGGATATGAAGTCAAGATCTCTAAAAGTCCTAGTGCTGCGAAATAACAATATTTCTGATTCAATTCCTTCTAATATTGGAGAGTTGCAAAGTTTGTATCACCTGGATTTAAGCTTCAACAATTTAGCAGGAGTAATACCACCTTCCCTGTTTAATTTGCGTTCGCTCAAAGCCCTGTTTCTTGGAAACAACAAGTTGAGTGGTAACCTTCCTGAAAATAAAAGCTCGTCTCTTGTCAATGTAGATCTGTCTTACAATAATCTAGTAGGGTCGAGCTTTCCTTCTTGGGTGAACGAAGACTTACAGCTTAATTTAGTTGCCAACAACTTCAGCACAGAAAATTCAAACAGCAGATCTTTGCCTTCAGGGTTGGAATGCCTCCAAAGGAACTTTCCTTGCAATGTTAACCCTGGAATCCATCCTGACATTGGGATTAAATGTGGTGGTCCTCAGTTCACGTCTTCCAATGGGATTGTGTATGATCAGGAAAATGAGATCCTTGGTCCAGCTACATATTTTGTGACTGGCACAAGCAGATGGGGAGTTAGCAATGTTGGTATTAAAACAGAGTATCAGGATGGATATATCACGGGACACATTCCTGAGTATACAGTTTCCTCGTCATCTCAATTCACGAATACTTCAGATCCTGAGCTATTCCGGACTGCAAGGATCTCTGCTTCATCTCTTAGATACTATGGCTTGGGGCTGCAGAATGGTGTCTACACAGTCAAACTTCAGTTTGCAGAACAAAAAATCCCAGATACTCCAAAAAATCTTGGGAGACGTGTATTTGATATATATATCCAGGGAATTCTAGTTTGGAAGGATTTTGATATACGAAAGGAAGCAGGTGGGAAATCTTTGCAAGCCGTTCAGAAGGAATATAAGGCCCAGGTTTCACAGAACTACCTTGAAATTCATCTCTTTTGGGCTGGAAAGGGGACTTGCTGCGTACCTGAGGTTGGTACTTATGGACCTGTTATTTCAGCCATCAGTGCTACACCAGATTTCCTACCTACTATCGTTCCGAACCATTCAACTAGTAAGAAGAATAGGACGGGGCTGATTGTGGGGATTGTTGTTGGTGGTGGAGTACTTTTGATTCTATTGTTGTTGGTTTTCTGTATAGTTCAAAGAAGTAAAAGGATTAACACCAGTAAAAATGAAGATCTGTTGGGAATAGATATTGGACCACTCACTTTCAGTTTTTCAGAGCTAAAGACAGCTACAGATGACTTTAGTCCAGTGAATAAGATTGGAGAGGGAGGATTTGGACCTGTCTATAAAGGTACTCTTAATGATGGAAGAGTAATTGCCGTGAAGCAATTGTCTGCAGCATCCCAGCAAGGAAAAAATGAGTTTGTAGCTGAAATTGCCACCATATCTGCCGTGCGACACAATAACCTAGTGAATTTGCATGGATTCTGCACTGAGGGAGTTAAACGGCTCCTTGTCTATGAGTATCTGGAAAACAAGAGTCTTGATCATGCATTATTTGGAAAAAGAAGTTTGAATCTTGATTGGTCATCAAGATTTGATATATGCTTGGGCGTGGCTAAAGGTTTGACTTATCTCCATGAGGAATCAAGGGTTCGGATTGTACACAGAGATGTGAAGGCCAGTAATATTCTGCTCGACTCTAATCTCATCCCCAAAATATCAGATTTCGGTTTGGCCAAGCTTTATGATGATAAAAAGACCCACATCAGTACTCGTGTTGCGGGAACAATTGGGTATCTTGCACCGGAATATGCCATGCGTGGACACTTGACACAGAAGACTGATGTGTTTGCCTTTGGTGTTCTTGCTCTAGAAATTGTCAGTGGTAGGCCAAATTCTGATCGGAGCTTGGAAGGCGAGATGATTTATCTTCTCGAATGGGCTTGGCACTTGCATGAAAACAAACGGGAAGTTGAACTAGTGGACTCTAGGTTATCAGAATTCAATGAGGAAGAGGCAAGACGAATAACCAAGATAGGACTTTTGTGCACTCAAACATCACCAATGCAGCGACCACCGATGTCGCGTGTGGTGGGAATGCTTTCAGGAGATATTGAAGTAATGACAGTAACTTCAAAGCCTAGTTACTTGACAGACTGGGAATTTGACGATGCAAGTATTTTGGGGGATCCAGGGCAGCTTTCTACAAATGCCACGGATGCCTTGCTTCATTATGTTGTTGATACCCAATCCCTACCGACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1017

Amino Acids

111.62

Weight (kDa)

5.84

Isoelectric Point (pI)

39.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 105 - 195 3.2e-08 Leucine-rich repeat region
LRR_14 PF23598 182 - 271 1.4e-07 Leucine-rich repeat region
LRR_14 PF23598 288 - 347 6.4e-06 Leucine-rich repeat region
LRR_8 PF13855 288 - 348 1.6e-07 Leucine rich repeat
Malectin PF11721 426 - 614 9.5e-41 Malectin domain
Pkinase PF00069 698 - 898 2.2e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 700 - 962 1.1e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1688
Acc36I ACCTGC 1 cut(s) 1688
AccB7I CCANNNNNTGG 1 cut(s) 188
AccBSI CCGCTC 1 cut(s) 194
AccI GTMKAC 3 cut(s) 535, 1454, 1569
AccII CGCG 2 cut(s) 118, 2875
AccIII TCCGGA 2 cut(s) 322, 1506
AciI CCGC 4 cut(s) 194, 267, 600, 2570
AclWI GGATC 6 cut(s) 173, 1336, 1487, 1526, 2972, 2985
AcoI YGGCCR 3 cut(s) 195, 243, 2523
AcsI RAATTY 9 cut(s) 553, 562, 1186, 1659, 1764, 2260, 2683, 2789, 2951
AcuI CTGAAG 6 cut(s) 132, 362, 1159, 1194, 1473, 1568
AfaI GTAC 6 cut(s) 1803, 1816, 1944, 2140, 2451, 2560
AfiI CCNNNNNNNGG 4 cut(s) 188, 648, 1274, 1811
AflIII ACRYGT 2 cut(s) 447, 1633
AhlI ACTAGT 2 cut(s) 1889, 2767
AjiI CACGTC 2 cut(s) 1305, 1634
AjnI CCWGG 5 cut(s) 948, 1255, 1653, 1740, 2980
AjuI GAANNNNNNNTTGG 4 cut(s) 1221, 1253, 1651, 1683
AloI GAACNNNNNNTCC 2 cut(s) 1587, 1619
Alw21I GWGCWC 2 cut(s) 124, 2840
Alw26I GTCTC 2 cut(s) 1080, 1624
Alw44I GTGCAC 1 cut(s) 2836
AlwI GGATC 6 cut(s) 173, 1336, 1487, 1526, 2972, 2985
AlwNI CAGNNNCTG 1 cut(s) 1496
Aor13HI TCCGGA 2 cut(s) 322, 1506
ApaLI GTGCAC 1 cut(s) 2836
ApoI RAATTY 9 cut(s) 553, 562, 1186, 1659, 1764, 2260, 2683, 2789, 2951
ArsI GACNNNNNNTTYG 2 cut(s) 2936, 2968
Asp700I GAANNNNTTC 1 cut(s) 2890
AspLEI GCGC 1 cut(s) 118
AspS9I GGNCC 8 cut(s) 386, 746, 1292, 1349, 1738, 1823, 2039, 2123
AsuC2I CCSGG 1 cut(s) 650
AsuHPI GGTGA 4 cut(s) 614, 938, 1147, 2841
AvaII GGWCC 7 cut(s) 386, 746, 1292, 1349, 1823, 2039, 2123
AxyI CCTNAGG 1 cut(s) 1806
BaeGI GKGCMC 1 cut(s) 2840
BalI TGGCCA 2 cut(s) 245, 2525
BamHI GGATCC 1 cut(s) 2977
BanII GRGCYC 1 cut(s) 124
BarI GAAGNNNNNNTAC 2 cut(s) 735, 767
BauI CACGAG 1 cut(s) 2562
BbsI GAAGAC 3 cut(s) 1149, 1299, 2633
Bbv12I GWGCWC 2 cut(s) 124, 2840
BccI CCATC 6 cut(s) 218, 1272, 1377, 1418, 1847, 2144
BceAI ACGGC 4 cut(s) 1703, 2150, 2222, 2309
BciT130I CCWGG 5 cut(s) 950, 1257, 1655, 1742, 2982
BciVI GTATCC 1 cut(s) 672
BclI TGATCA 2 cut(s) 1327, 2332
BcnI CCSGG 1 cut(s) 650
BcoDI GTCTC 2 cut(s) 1080, 1624
BcuI ACTAGT 2 cut(s) 1889, 2767
BfmI CTRYAG 4 cut(s) 46, 1556, 2076, 2181
BfuAI ACCTGC 1 cut(s) 1688
BfuI GTATCC 1 cut(s) 672
BglII AGATCT 4 cut(s) 863, 1090, 1199, 2017
BmcAI AGTACT 2 cut(s) 1944, 2560
Bme1390I CCNGG 6 cut(s) 650, 950, 1257, 1655, 1742, 2982
Bme18I GGWCC 7 cut(s) 386, 746, 1292, 1349, 1823, 2039, 2123
BmgBI CACGTC 2 cut(s) 1305, 1634
BmgT120I GGNCC 8 cut(s) 386, 746, 1292, 1349, 1738, 1823, 2039, 2123
BmiI GGNNCC 2 cut(s) 2297, 2979
BmrFI CCNGG 6 cut(s) 650, 950, 1257, 1655, 1742, 2982
BmrI ACTGGG 1 cut(s) 2956
BmsI GCATC 4 cut(s) 407, 2195, 2950, 2998
BmuI ACTGGG 1 cut(s) 2956
BoxI GACNNNNGTC 1 cut(s) 2088
BpiI GAAGAC 3 cut(s) 1149, 1299, 2633
BpmI CTGGAG 1 cut(s) 612
Bpu10I CCTNAGC 3 cut(s) 90, 436, 1497
BpuEI CTTGAG 1 cut(s) 803
BpuMI CCSGG 1 cut(s) 650
BsaJI CCNNGG 7 cut(s) 717, 1255, 1345, 1654, 1740, 2981, 3003
BsaWI WCCGGW 4 cut(s) 322, 527, 1506, 2593
Bsc4I CCNNNNNNNGG 4 cut(s) 188, 648, 1274, 1811
Bse1I ACTGG 6 cut(s) 819, 1375, 2004, 2093, 2469, 2951
Bse21I CCTNAGG 1 cut(s) 1806
Bse3DI GCAATG 3 cut(s) 149, 1252, 1402
BseAI TCCGGA 2 cut(s) 322, 1506
BseBI CCWGG 5 cut(s) 950, 1257, 1655, 1742, 2982
BseDI CCNNGG 7 cut(s) 717, 1255, 1345, 1654, 1740, 2981, 3003
BseGI GGATG 5 cut(s) 1264, 1429, 2186, 2496, 3013
BseLI CCNNNNNNNGG 4 cut(s) 188, 648, 1274, 1811
BseMI GCAATG 3 cut(s) 149, 1252, 1402
BseMII CTCAG 9 cut(s) 104, 116, 404, 782, 1310, 1440, 1488, 1797, 2271
BseNI ACTGG 6 cut(s) 819, 1375, 2004, 2093, 2469, 2951
BseRI GAGGAG 1 cut(s) 800
BseSI GKGCMC 1 cut(s) 2840
BseYI CCCAGC 1 cut(s) 2190
BsgI GTGCAG 1 cut(s) 2260
Bsh1236I CGCG 2 cut(s) 118, 2875
BsiHKAI GWGCWC 2 cut(s) 124, 2840
BsiSI CCGG 5 cut(s) 323, 528, 649, 1507, 2594
BslFI GGGAC 3 cut(s) 526, 1452, 1804
BslI CCNNNNNNNGG 4 cut(s) 188, 648, 1274, 1811
BsmAI GTCTC 2 cut(s) 1080, 1624
BsmBI CGTCTC 2 cut(s) 1080, 1624
BsmFI GGGAC 3 cut(s) 526, 1452, 1804
BsmI GAATGC 2 cut(s) 1226, 2892
Bsp1286I GDGCHC 2 cut(s) 124, 2840
Bsp13I TCCGGA 2 cut(s) 322, 1506
Bsp1407I TGTACA 1 cut(s) 2449
BspACI CCGC 4 cut(s) 194, 267, 600, 2570
BspCNI CTCAG 9 cut(s) 103, 117, 405, 783, 1309, 1441, 1489, 1798, 2272
BspEI TCCGGA 2 cut(s) 322, 1506
BspFNI CGCG 2 cut(s) 118, 2875
BspLI GGNNCC 2 cut(s) 2297, 2979
BspMAI CTGCAG 3 cut(s) 50, 1560, 2185
BspMI ACCTGC 1 cut(s) 1688
BspPI GGATC 6 cut(s) 173, 1336, 1487, 1526, 2972, 2985
BsrBI CCGCTC 1 cut(s) 194
BsrDI GCAATG 3 cut(s) 149, 1252, 1402
BsrGI TGTACA 1 cut(s) 2449
BsrI ACTGG 6 cut(s) 819, 1375, 2004, 2093, 2469, 2951
BssECI CCNNGG 7 cut(s) 717, 1255, 1345, 1654, 1740, 2981, 3003
BssNAI GTATAC 1 cut(s) 1455
BssSI CACGAG 1 cut(s) 2562
BssT1I CCWWGG 2 cut(s) 717, 1345
Bst1107I GTATAC 1 cut(s) 1455
Bst2BI CACGAG 1 cut(s) 2562
Bst2UI CCWGG 5 cut(s) 950, 1257, 1655, 1742, 2982
Bst4CI ACNGT 5 cut(s) 257, 765, 1459, 1576, 2917
Bst6I CTCTTC 3 cut(s) 835, 2149, 2796
BstAUI TGTACA 1 cut(s) 2449
BstC8I GCNNGC 5 cut(s) 120, 271, 422, 461, 1716
BstDSI CCRYGG 1 cut(s) 3003
BstEII GGTNACC 1 cut(s) 1049
BstF5I GGATG 5 cut(s) 1264, 1429, 2186, 2496, 3013
BstFNI CGCG 2 cut(s) 118, 2875
BstHHI GCGC 1 cut(s) 118
BstMAI GTCTC 2 cut(s) 1080, 1624
BstMWI GCNNNNNNNGC 6 cut(s) 48, 80, 1844, 2222, 2703, 3008
BstNI CCWGG 5 cut(s) 950, 1257, 1655, 1742, 2982
BstNSI RCATGY 1 cut(s) 451
BstPAI GACNNNNGTC 1 cut(s) 2088
BstPI GGTNACC 1 cut(s) 1049
BstSCI CCNGG 6 cut(s) 648, 948, 1255, 1653, 1740, 2980
BstSFI CTRYAG 4 cut(s) 46, 1556, 2076, 2181
BstSLI GKGCMC 1 cut(s) 2840
BstUI CGCG 2 cut(s) 118, 2875
BstV2I GAAGAC 3 cut(s) 1149, 1299, 2633
BstX2I RGATCY 9 cut(s) 178, 863, 1090, 1199, 1341, 1492, 1518, 2017, 2977
BstYI RGATCY 9 cut(s) 178, 863, 1090, 1199, 1341, 1492, 1518, 2017, 2977
BstZ17I GTATAC 1 cut(s) 1455
Bsu36I CCTNAGG 1 cut(s) 1806
BsuI GTATCC 1 cut(s) 672
BtgI CCRYGG 1 cut(s) 3003
BtrI CACGTC 2 cut(s) 1305, 1634
BtsCI GGATG 5 cut(s) 1264, 1429, 2186, 2496, 3013
BtsI GCAGTG 1 cut(s) 193
BtsIMutI CAGTG 7 cut(s) 193, 761, 826, 1849, 2100, 2277, 2677
BveI ACCTGC 1 cut(s) 1688
Cac8I GCNNGC 5 cut(s) 120, 271, 422, 461, 1716
CaiI CAGNNNCTG 1 cut(s) 1496
CfoI GCGC 1 cut(s) 118
Cfr13I GGNCC 8 cut(s) 386, 746, 1292, 1349, 1738, 1823, 2039, 2123
Csp6I GTAC 6 cut(s) 1802, 1815, 1943, 2139, 2450, 2559
CspCI CAANNNNNGTGG 2 cut(s) 1027, 1062
CviAII CATG 8 cut(s) 183, 448, 542, 2267, 2336, 2426, 2605, 2744
CviQI GTAC 6 cut(s) 1802, 1815, 1943, 2139, 2450, 2559
EaeI YGGCCR 3 cut(s) 195, 243, 2523
Eam1104I CTCTTC 3 cut(s) 835, 2149, 2796
EarI CTCTTC 3 cut(s) 835, 2149, 2796
Ecl136II GAGCTC 1 cut(s) 122
Eco130I CCWWGG 2 cut(s) 717, 1345
Eco24I GRGCYC 1 cut(s) 124
Eco47I GGWCC 7 cut(s) 386, 746, 1292, 1349, 1823, 2039, 2123
Eco53kI GAGCTC 1 cut(s) 122
Eco57I CTGAAG 6 cut(s) 132, 362, 1159, 1194, 1473, 1568
Eco81I CCTNAGG 1 cut(s) 1806
Eco91I GGTNACC 1 cut(s) 1049
EcoICRI GAGCTC 1 cut(s) 122
EcoO109I RGGNCCY 2 cut(s) 386, 746
EcoO65I GGTNACC 1 cut(s) 1049
EcoRI GAATTC 2 cut(s) 1659, 2789
EcoRII CCWGG 5 cut(s) 948, 1255, 1653, 1740, 2980
EcoT14I CCWWGG 2 cut(s) 717, 1345
EcoT22I ATGCAT 1 cut(s) 2341
EcoT38I GRGCYC 1 cut(s) 124
ErhI CCWWGG 2 cut(s) 717, 1345
Esp3I CGTCTC 2 cut(s) 1080, 1624
FaeI CATG 8 cut(s) 186, 451, 545, 2270, 2339, 2429, 2608, 2747
FalI AAGNNNNNCTT 2 cut(s) 2127, 2159
FaqI GGGAC 3 cut(s) 526, 1452, 1804
FatI CATG 8 cut(s) 182, 447, 541, 2266, 2335, 2425, 2604, 2743
FauI CCCGC 1 cut(s) 2563
FbaI TGATCA 2 cut(s) 1327, 2332
FblI GTMKAC 3 cut(s) 535, 1454, 1569
FokI GGATG 5 cut(s) 1251, 1436, 2173, 2483, 3020
FriOI GRGCYC 1 cut(s) 124
GlaI GCGC 1 cut(s) 117
GsaI CCCAGC 1 cut(s) 2194
GsuI CTGGAG 1 cut(s) 612
HapII CCGG 5 cut(s) 323, 528, 649, 1507, 2594
HhaI GCGC 1 cut(s) 118
Hin1II CATG 8 cut(s) 186, 451, 545, 2270, 2339, 2429, 2608, 2747
Hin6I GCGC 1 cut(s) 116
HinP1I GCGC 1 cut(s) 116
HincII GTYRAC 1 cut(s) 1252
HindII GTYRAC 1 cut(s) 1252
HindIII AAGCTT 4 cut(s) 228, 707, 958, 2528
HpaI GTTAAC 1 cut(s) 1252
HpaII CCGG 5 cut(s) 323, 528, 649, 1507, 2594
HphI GGTGA 4 cut(s) 614, 938, 1147, 2841
Hpy99I CGWCG 1 cut(s) 619
HpyCH4III ACNGT 5 cut(s) 257, 765, 1459, 1576, 2917
HpyCH4IV ACGT 3 cut(s) 617, 1304, 1633
HpyF10VI GCNNNNNNNGC 6 cut(s) 48, 80, 1844, 2222, 2703, 3008
HpySE526I ACGT 3 cut(s) 617, 1304, 1633
Hsp92II CATG 8 cut(s) 186, 451, 545, 2270, 2339, 2429, 2608, 2747
HspAI GCGC 1 cut(s) 116
Kpn2I TCCGGA 2 cut(s) 322, 1506
Ksp22I TGATCA 2 cut(s) 1327, 2332
KspAI GTTAAC 1 cut(s) 1252
LmnI GCTCC 4 cut(s) 191, 787, 2301, 2694
LweI GCATC 4 cut(s) 407, 2195, 2950, 2998
MaeII ACGT 3 cut(s) 617, 1304, 1633
MaeIII GTNAC 5 cut(s) 368, 1049, 1366, 2917, 2933
MbiI CCGCTC 1 cut(s) 194
MfeI CAATTG 3 cut(s) 402, 2174, 2577
MflI RGATCY 9 cut(s) 178, 863, 1090, 1199, 1341, 1492, 1518, 2017, 2977
MhlI GDGCHC 2 cut(s) 124, 2840
MlsI TGGCCA 2 cut(s) 245, 2525
MluNI TGGCCA 2 cut(s) 245, 2525
MlyI GAGTC 5 cut(s) 200, 331, 2335, 2480, 2768
MmeI TCCRAC 1 cut(s) 1197
Mox20I TGGCCA 2 cut(s) 245, 2525
Mph1103I ATGCAT 1 cut(s) 2341
MroI TCCGGA 2 cut(s) 322, 1506
MroXI GAANNNNTTC 1 cut(s) 2890
MscI TGGCCA 2 cut(s) 245, 2525
MslI CAYNNNNRTG 2 cut(s) 2457, 2742
Msp20I TGGCCA 2 cut(s) 245, 2525
MspA1I CMGCKG 1 cut(s) 45
MspI CCGG 5 cut(s) 323, 528, 649, 1507, 2594
MspR9I CCNGG 6 cut(s) 650, 950, 1257, 1655, 1742, 2982
MunI CAATTG 3 cut(s) 402, 2174, 2577
Mva1269I GAATGC 2 cut(s) 1226, 2892
MvaI CCWGG 5 cut(s) 950, 1257, 1655, 1742, 2982
MvnI CGCG 2 cut(s) 118, 2875
MwoI GCNNNNNNNGC 6 cut(s) 48, 80, 1844, 2222, 2703, 3008
NciI CCSGG 1 cut(s) 650
NlaIII CATG 8 cut(s) 186, 451, 545, 2270, 2339, 2429, 2608, 2747
NlaIV GGNNCC 2 cut(s) 2297, 2979
NmuCI GTSAC 2 cut(s) 368, 1366
NsiI ATGCAT 1 cut(s) 2341
NspI RCATGY 1 cut(s) 451
PaqCI CACCTGC 1 cut(s) 1688
PciI ACATGT 1 cut(s) 447
PcsI WCGNNNNNNNCGW 1 cut(s) 210
PctI GAATGC 2 cut(s) 1226, 2892
PdmI GAANNNNTTC 1 cut(s) 2890
PfeI GAWTC 7 cut(s) 607, 905, 1260, 1951, 2271, 2362, 2432
PflMI CCANNNNNTGG 1 cut(s) 188
PleI GAGTC 5 cut(s) 200, 331, 2334, 2480, 2768
PpsI GAGTC 5 cut(s) 200, 331, 2334, 2480, 2768
PpuMI RGGWCCY 2 cut(s) 386, 746
PscI ACATGT 1 cut(s) 447
PshAI GACNNNNGTC 1 cut(s) 2088
Psp124BI GAGCTC 1 cut(s) 124
Psp5II RGGWCCY 2 cut(s) 386, 746
Psp6I CCWGG 5 cut(s) 948, 1255, 1653, 1740, 2980
PspEI GGTNACC 1 cut(s) 1049
PspFI CCCAGC 1 cut(s) 2190
PspGI CCWGG 5 cut(s) 948, 1255, 1653, 1740, 2980
PspN4I GGNNCC 2 cut(s) 2297, 2979
PspPI GGNCC 8 cut(s) 386, 746, 1292, 1349, 1738, 1823, 2039, 2123
PspPPI RGGWCCY 2 cut(s) 386, 746
PstI CTGCAG 3 cut(s) 50, 1560, 2185
PstNI CAGNNNCTG 1 cut(s) 1496
PsuI RGATCY 9 cut(s) 178, 863, 1090, 1199, 1341, 1492, 1518, 2017, 2977
PvuII CAGCTG 1 cut(s) 45
RsaI GTAC 6 cut(s) 1803, 1816, 1944, 2140, 2451, 2560
RsaNI GTAC 6 cut(s) 1802, 1815, 1943, 2139, 2450, 2559
RseI CAYNNNNRTG 2 cut(s) 2457, 2742
SacI GAGCTC 1 cut(s) 124
Sau96I GGNCC 8 cut(s) 386, 746, 1292, 1349, 1738, 1823, 2039, 2123
ScaI AGTACT 2 cut(s) 1944, 2560
SchI GAGTC 5 cut(s) 200, 331, 2335, 2480, 2768
ScrFI CCNGG 6 cut(s) 650, 950, 1257, 1655, 1742, 2982
SduI GDGCHC 2 cut(s) 124, 2840
SfaNI GCATC 4 cut(s) 407, 2195, 2950, 2998
SfcI CTRYAG 4 cut(s) 46, 1556, 2076, 2181
SinI GGWCC 7 cut(s) 386, 746, 1292, 1349, 1823, 2039, 2123
SmiMI CAYNNNNRTG 2 cut(s) 2457, 2742
SmlI CTYRAG 1 cut(s) 782
SmoI CTYRAG 1 cut(s) 782
SpeI ACTAGT 2 cut(s) 1889, 2767
SsiI CCGC 4 cut(s) 194, 267, 600, 2570
SspI AATATT 4 cut(s) 428, 898, 922, 2476
SstI GAGCTC 1 cut(s) 124
StyD4I CCNGG 6 cut(s) 648, 948, 1255, 1653, 1740, 2980
StyI CCWWGG 2 cut(s) 717, 1345
TaaI ACNGT 5 cut(s) 257, 765, 1459, 1576, 2917
TaiI ACGT 3 cut(s) 620, 1307, 1636
TaqI TCGA 5 cut(s) 213, 360, 1118, 2484, 2724
TatI WGTACW 3 cut(s) 1942, 2449, 2558
TauI GCSGC 1 cut(s) 197
TfiI GAWTC 7 cut(s) 607, 905, 1260, 1951, 2271, 2362, 2432
TscAI CASTG 7 cut(s) 193, 768, 826, 1849, 2100, 2284, 2677
TseFI GTSAC 2 cut(s) 368, 1366
Tsp45I GTSAC 2 cut(s) 368, 1366
TspDTI ATGAA 9 cut(s) 43, 49, 533, 869, 1518, 1757, 2028, 2760, 3008
TspGWI ACGGA 1 cut(s) 3020
TspRI CASTG 7 cut(s) 193, 768, 826, 1849, 2100, 2284, 2677
Van91I CCANNNNNTGG 1 cut(s) 188
VneI GTGCAC 1 cut(s) 2836
VpaK11BI GGWCC 7 cut(s) 386, 746, 1292, 1349, 1823, 2039, 2123
XapI RAATTY 9 cut(s) 553, 562, 1186, 1659, 1764, 2260, 2683, 2789, 2951
XbaI TCTAGA 1 cut(s) 2659
XceI RCATGY 1 cut(s) 451
XcmI CCANNNNNNNNNTGG 1 cut(s) 1271
XmiI GTMKAC 3 cut(s) 535, 1454, 1569
XmnI GAANNNNTTC 1 cut(s) 2890
ZrmI AGTACT 2 cut(s) 1944, 2560
Zsp2I ATGCAT 1 cut(s) 2341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.