Rmu_sc0001352.1_g000003

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001352.1
OG0000018
Physical Location & Seq
Forward (+)
15358 .. 18443
3086 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001352.1_g000003.1.cds

Sequence Viewer

Length: 2919 bp
atggctgaggcactcatcaacctgcttctggaacaattggttacagtttcttttgaccacacaaaagaagctgtgaatcttattaggaatgctgagacagaggtcaaaaaattcagcagcaatctaaaagcaattcaagctgtgctcgaggatgctgagaagcagcaagtggagaaacctagcgtgagaaactggttggatgggctgaatgatgtctcttacgagatggttgacgtgctagatgagtggaacactgaaattctgaaacaagaggcaaatggagttgctactgagaaaaagaaagcctccaagaaggtatgtttctccattccctcgaattgcttttgttttggtctagtccataaggcaactcatcttcataaaatagctaccgagatgaaagagttgaatgaaaagctaaatctgattactgctcagaaagaaaagtttgagtttcatcaatcctcaactcgtaggaatgatgaacaacttaagcaacagctaaaaacttcatcatttgtcgatatttctaaaatatttggcagagaagaagcaaaagctgatttgttaagcaagttgttgagtgatagtagtgaagaaggtaaaagggtccttgtcatccctatagtgggtatgggagggatgggcaagacaactcttgcccaattagcctacaacaacgaagatgtaaaaacctattttgaaaagagaatatgggtttgtgtctcagatccttttgatgaggtgaagattgccaaagccattattaggggtactggtagtaatgaggaccagaatttaactgagttggacgaagtcttgcagtgtatgtctagatgtattaaggagaaacagtgcttgatttttctagatgatgtgtggaccgaagaccaaagaaaatgggaaagtttaaacttacctttaataatggaaaaaaattgtgctgaaggtagtaaaatagtggtgaccacacgaaaagagagagttgctcagataatgggagcaactactcaaatgatccatttagaaaagctgagtgatgaaaattgtctagcattgtttagtagcattgcatatttggagaggaaaaaagatgaggctaatggatttagagctataggtgagaaaatagcaaaaaagtgtaacggcttgccacttgctgcaaaaactttaggtgctctcatgcggtataagaaggaaaggagagattggcaggaggtcttggatagtaagatatgggatctaaccgtggttcagcaagaagtttttcaaccacttttattaagttattatgagttggcccctgtagttaagcgttgccttttatactgtgctgcatttccaaaagattatcggttcaagaaacacaatttgattgagctgtggatgtcacaggattatcttagtgggaaagactataaagaaaaggaaaaaataggtcaaaatgttttcgataccttagtaatgcgatcattttttcaggatgttgtgaaagaagtagattttgatgacaagagcattactgtattttgcaaaatgcatgatattgtgcatgactttgtgcaattcctcaataagaatgaatgttttacaatggaggctaaagaagtagacggaagaaaaacggtaataagtgaggaggtccgtcatttgacgttaatgtttgcaccatttggttctccactttcggattttatttcaccggtcaatcagaaaaagttacgtactcttgcaacttttgattcaagcatgcgtagcatagatataaaagcaatctcacaactgaaatatctgaggaccttaaatttgagctgcaactacgacattgaagaacttccagaagaggtgggagaattgatacatttgaggtatctcgacttgtctgaaaattatgatttgaagaaactaccggacagtgtgggaaatttatacaatttgcaaaccttgtgtcttactgactgcatgtcgcttacagcactgcctgaaaatatggggaacttgattaatttaagacatcttcataccatggtttgtaacctagagtatttgccgagaggtatggcgagattaacaagtctgcaaacactaaataagtgtcctgttaataacggtgaaggcttgaaattaggagatctgggaagcttcgaccagcttcagggtagtctcgagattcaaatcagggggaatttgaaggatacgagtgaggcgcagaaggctggcttgcggaataaaaagcttcattatttgcggctattatttctaggattggagaagcagagccatgtacaagtcctggaggcgttacggccgcatcaagatctggaaaatttactgatttttgggtatcttggcaccaccgcgcccagttggatgctatccttacagaatttgagatccctttctcttgagtgttggaatgaacgcgaattgttgcctcctcttgggaaattgccgttccttgaagaactatcagtatcccgtatggagaaagtgaagacggttggagatgaatttttaggaataacgggtactcaaacatcatcatcatcatcatcatcctctgttttattcccaaaattgaaacaactcaccttccaaaacatgtgggagtggaaacagtgggaaggagttggagggtggacagaaaatagtggtgatgaaattacaattatgccatgccttgtttccctcagaattcgctactgccgtcagctgatgaacttgccactcttcctgcaaaagacgccggtcaggaatgttgaaatcaggtcctgtcgtcggagtattagaatgcctgtctggcccgagagctgtgaggtcgaaatttttcaagatgaggaggatccggtaataccggatgtttctgagagggttgaaacagagacacagagagatgaggagatcaccaccagcacctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

972

Amino Acids

111.4

Weight (kDa)

5.71

Isoelectric Point (pI)

47.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 30
AccB1I GGYRCC 1 cut(s) 2351
AccI GTMKAC 1 cut(s) 1611
AccII CGCG 2 cut(s) 2360, 2424
AciI CCGC 5 cut(s) 1186, 2224, 2248, 2309, 2358
AclWI GGATC 6 cut(s) 725, 1012, 1248, 2388, 2837, 2850
AcoI YGGCCR 1 cut(s) 2306
AcuI CTGAAG 2 cut(s) 966, 2138
AcyI GRCGYC 1 cut(s) 2744
AfaI GTAC 4 cut(s) 775, 1726, 2286, 2530
AfiI CCNNNNNNNGG 7 cut(s) 28, 628, 629, 768, 2155, 2441, 2778
AflII CTTAAG 1 cut(s) 491
AflIII ACRYGT 1 cut(s) 2601
AgeI ACCGGT 1 cut(s) 1702
AhdI GACNNNNNGTC 1 cut(s) 1963
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 1 cut(s) 2292
Alw21I GWGCWC 2 cut(s) 147, 1180
Alw26I GTCTC 5 cut(s) 89, 220, 730, 2168, 2876
AlwI GGATC 6 cut(s) 725, 1012, 1248, 2388, 2837, 2850
AlwNI CAGNNNCTG 2 cut(s) 2772, 2916
Ama87I CYCGRG 3 cut(s) 146, 2165, 2804
AoxI GGCC 3 cut(s) 1299, 2306, 2801
ApeKI GCWGC 5 cut(s) 117, 163, 1160, 1334, 1812
ArsI GACNNNNNNTTYG 4 cut(s) 1789, 1821, 1933, 1965
AseI ATTAAT 1 cut(s) 2004
AsiGI ACCGGT 1 cut(s) 1702
Asp700I GAANNNNTTC 3 cut(s) 1266, 1833, 2826
AspLEI GCGC 2 cut(s) 2209, 2362
AspS9I GGNCC 8 cut(s) 610, 790, 882, 1300, 1642, 1797, 2769, 2802
AsuHPI GGTGA 8 cut(s) 757, 976, 1133, 1692, 2123, 2581, 2666, 2896
AvaI CYCGRG 3 cut(s) 146, 2165, 2804
AvaII GGWCC 6 cut(s) 610, 790, 882, 1642, 1797, 2769
BaeI ACNNNNGTAYC 2 cut(s) 1446, 1479
BamHI GGATCC 1 cut(s) 2842
BanI GGYRCC 1 cut(s) 2351
BbsI GAAGAC 2 cut(s) 894, 2501
Bbv12I GWGCWC 2 cut(s) 147, 1180
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 5 cut(s) 129, 175, 1147, 1321, 1799
BccI CCATC 3 cut(s) 194, 220, 637
BceAI ACGGC 4 cut(s) 1162, 2321, 2437, 2691
BciT130I CCWGG 1 cut(s) 2294
BciVI GTATCC 2 cut(s) 2188, 2485
BcoDI GTCTC 5 cut(s) 89, 220, 730, 2168, 2876
BfaI CTAG 8 cut(s) 180, 239, 356, 834, 869, 1052, 2039, 2261
BfmI CTRYAG 3 cut(s) 624, 1116, 1305
BfrI CTTAAG 1 cut(s) 491
BfuAI ACCTGC 1 cut(s) 30
BfuI GTATCC 2 cut(s) 2188, 2485
BglI GCCNNNNNGGC 1 cut(s) 2800
BglII AGATCT 2 cut(s) 2131, 2317
BisI GCNGC 7 cut(s) 118, 164, 1161, 1335, 1813, 2249, 2309
BlsI GCNGC 7 cut(s) 119, 165, 1162, 1336, 1814, 2250, 2310
Bme1390I CCNGG 1 cut(s) 2294
Bme18I GGWCC 6 cut(s) 610, 790, 882, 1642, 1797, 2769
BmeRI GACNNNNNGTC 1 cut(s) 1963
BmeT110I CYCGRG 3 cut(s) 146, 2165, 2804
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 8 cut(s) 610, 790, 882, 1300, 1642, 1797, 2769, 2802
BmiI GGNNCC 4 cut(s) 611, 1302, 2353, 2844
BmrFI CCNGG 1 cut(s) 2294
BmrI ACTGGG 1 cut(s) 2358
BmsI GCATC 3 cut(s) 142, 2320, 2361
BmuI ACTGGG 1 cut(s) 2358
BoxI GACNNNNGTC 2 cut(s) 101, 2747
BpiI GAAGAC 2 cut(s) 894, 2501
BplI GAGNNNNNCTC 2 cut(s) 973, 1005
BpmI CTGGAG 1 cut(s) 2315
Bpu10I CCTNAGC 1 cut(s) 6
BpuEI CTTGAG 1 cut(s) 2426
BsaAI YACGTR 1 cut(s) 1724
BsaBI GATNNNNATC 1 cut(s) 2174
BsaHI GRCGYC 1 cut(s) 2744
BsaJI CCNNGG 2 cut(s) 1248, 2025
BsaWI WCCGGW 4 cut(s) 1702, 1909, 2845, 2854
BsaXI ACNNNNNCTCC 2 cut(s) 839, 869
Bsc4I CCNNNNNNNGG 7 cut(s) 28, 628, 629, 768, 2155, 2441, 2778
Bse118I RCCGGY 2 cut(s) 1702, 2746
Bse1I ACTGG 3 cut(s) 197, 781, 2364
Bse3DI GCAATG 1 cut(s) 1068
Bse8I GATNNNNATC 1 cut(s) 2174
BseBI CCWGG 1 cut(s) 2294
BseDI CCNNGG 2 cut(s) 1248, 2025
BseGI GGATG 9 cut(s) 157, 205, 618, 648, 1392, 1489, 2376, 2555, 2863
BseJI GATNNNNATC 1 cut(s) 2174
BseLI CCNNNNNNNGG 7 cut(s) 28, 628, 629, 768, 2155, 2441, 2778
BseMI GCAATG 1 cut(s) 1068
BseNI ACTGG 3 cut(s) 197, 781, 2364
BseRI GAGGAG 4 cut(s) 1652, 2427, 2852, 2912
BseX3I CGGCCG 1 cut(s) 2306
BseXI GCAGC 5 cut(s) 129, 175, 1147, 1321, 1799
Bsh1236I CGCG 2 cut(s) 2360, 2424
Bsh1285I CGRYCG 1 cut(s) 2309
BshFI GGCC 3 cut(s) 1301, 2308, 2803
BshNI GGYRCC 1 cut(s) 2351
BshTI ACCGGT 1 cut(s) 1702
BsiEI CGRYCG 1 cut(s) 2309
BsiHKAI GWGCWC 2 cut(s) 147, 1180
BsiHKCI CYCGRG 3 cut(s) 146, 2165, 2804
BsiSI CCGG 5 cut(s) 1703, 1910, 2747, 2846, 2855
BslI CCNNNNNNNGG 7 cut(s) 28, 628, 629, 768, 2155, 2441, 2778
BsmAI GTCTC 5 cut(s) 89, 220, 730, 2168, 2876
BsmI GAATGC 2 cut(s) 94, 2796
BsnI GGCC 3 cut(s) 1301, 2308, 2803
BsoBI CYCGRG 3 cut(s) 146, 2165, 2804
Bsp1286I GDGCHC 2 cut(s) 147, 1180
Bsp1407I TGTACA 1 cut(s) 2284
Bsp143I GATC 9 cut(s) 730, 1017, 1240, 1469, 2131, 2317, 2393, 2842, 2901
Bsp19I CCATGG 1 cut(s) 2025
BspACI CCGC 5 cut(s) 1186, 2224, 2248, 2309, 2358
BspANI GGCC 3 cut(s) 1301, 2308, 2803
BspFNI CGCG 2 cut(s) 2360, 2424
BspLI GGNNCC 4 cut(s) 611, 1302, 2353, 2844
BspMI ACCTGC 1 cut(s) 30
BspPI GGATC 6 cut(s) 725, 1012, 1248, 2388, 2837, 2850
BspT107I GGYRCC 1 cut(s) 2351
BspTI CTTAAG 1 cut(s) 491
BsrDI GCAATG 1 cut(s) 1068
BsrFI RCCGGY 2 cut(s) 1702, 2746
BsrGI TGTACA 1 cut(s) 2284
BsrI ACTGG 3 cut(s) 197, 781, 2364
BssAI RCCGGY 2 cut(s) 1702, 2746
BssECI CCNNGG 2 cut(s) 1248, 2025
BssMI GATC 9 cut(s) 730, 1017, 1240, 1469, 2131, 2317, 2393, 2842, 2901
BssNI GRCGYC 1 cut(s) 2744
BssT1I CCWWGG 1 cut(s) 2025
Bst2UI CCWGG 1 cut(s) 2294
Bst6I CTCTTC 2 cut(s) 1836, 2735
BstACI GRCGYC 1 cut(s) 2744
BstAFI CTTAAG 1 cut(s) 491
BstAUI TGTACA 1 cut(s) 2284
BstBAI YACGTR 1 cut(s) 1724
BstC8I GCNNGC 4 cut(s) 1151, 1751, 2218, 2222
BstDSI CCRYGG 2 cut(s) 1248, 2025
BstEII GGTNACC 1 cut(s) 964
BstF5I GGATG 9 cut(s) 157, 205, 618, 648, 1392, 1489, 2376, 2555, 2863
BstFNI CGCG 2 cut(s) 2360, 2424
BstHHI GCGC 2 cut(s) 2209, 2362
BstKTI GATC 9 cut(s) 733, 1020, 1243, 1472, 2134, 2320, 2396, 2845, 2904
BstMAI GTCTC 5 cut(s) 89, 220, 730, 2168, 2876
BstMBI GATC 9 cut(s) 730, 1017, 1240, 1469, 2131, 2317, 2393, 2842, 2901
BstMCI CGRYCG 1 cut(s) 2309
BstMWI GCNNNNNNNGC 6 cut(s) 137, 668, 1755, 2213, 2743, 2800
BstNI CCWGG 1 cut(s) 2294
BstNSI RCATGY 3 cut(s) 1753, 1966, 2605
BstPAI GACNNNNGTC 2 cut(s) 101, 2747
BstPI GGTNACC 1 cut(s) 964
BstSCI CCNGG 1 cut(s) 2292
BstSFI CTRYAG 3 cut(s) 624, 1116, 1305
BstSNI TACGTA 1 cut(s) 1724
BstUI CGCG 2 cut(s) 2360, 2424
BstV1I GCAGC 5 cut(s) 129, 175, 1147, 1321, 1799
BstV2I GAAGAC 2 cut(s) 894, 2501
BstX2I RGATCY 6 cut(s) 730, 1240, 2131, 2317, 2393, 2842
BstYI RGATCY 6 cut(s) 730, 1240, 2131, 2317, 2393, 2842
BstZI CGGCCG 1 cut(s) 2306
BsuI GTATCC 2 cut(s) 2188, 2485
BsuRI GGCC 3 cut(s) 1301, 2308, 2803
BtgI CCRYGG 2 cut(s) 1248, 2025
BtrI CACGTC 1 cut(s) 235
BtsCI GGATG 9 cut(s) 157, 205, 618, 648, 1392, 1489, 2376, 2555, 2863
BtsI GCAGTG 2 cut(s) 830, 1976
BtsIMutI CAGTG 6 cut(s) 252, 830, 860, 1921, 1976, 2624
BveI ACCTGC 1 cut(s) 30
Cac8I GCNNGC 4 cut(s) 1151, 1751, 2218, 2222
CaiI CAGNNNCTG 2 cut(s) 2772, 2916
CfoI GCGC 2 cut(s) 2209, 2362
Cfr10I RCCGGY 2 cut(s) 1702, 2746
Cfr13I GGNCC 8 cut(s) 610, 790, 882, 1300, 1642, 1797, 2769, 2802
CseI GACGC 1 cut(s) 2752
Csp6I GTAC 4 cut(s) 774, 1725, 2285, 2529
CspAI ACCGGT 1 cut(s) 1702
CspCI CAANNNNNGTGG 2 cut(s) 2585, 2620
CviAII CATG 9 cut(s) 1183, 1541, 1553, 1750, 1963, 2026, 2282, 2602, 2676
CviQI GTAC 4 cut(s) 774, 1725, 2285, 2529
DpnI GATC 9 cut(s) 732, 1019, 1242, 1471, 2133, 2319, 2395, 2844, 2903
DpnII GATC 9 cut(s) 730, 1017, 1240, 1469, 2131, 2317, 2393, 2842, 2901
DraI TTTAAA 1 cut(s) 912
DriI GACNNNNNGTC 1 cut(s) 1963
EaeI YGGCCR 1 cut(s) 2306
EagI CGGCCG 1 cut(s) 2306
Eam1104I CTCTTC 2 cut(s) 1836, 2735
Eam1105I GACNNNNNGTC 1 cut(s) 1963
EarI CTCTTC 2 cut(s) 1836, 2735
EclXI CGGCCG 1 cut(s) 2306
Eco105I TACGTA 1 cut(s) 1724
Eco130I CCWWGG 1 cut(s) 2025
Eco47I GGWCC 6 cut(s) 610, 790, 882, 1642, 1797, 2769
Eco52I CGGCCG 1 cut(s) 2306
Eco57I CTGAAG 2 cut(s) 966, 2138
Eco88I CYCGRG 3 cut(s) 146, 2165, 2804
Eco91I GGTNACC 1 cut(s) 964
EcoO109I RGGNCCY 3 cut(s) 610, 1797, 2769
EcoO65I GGTNACC 1 cut(s) 964
EcoRI GAATTC 1 cut(s) 2694
EcoRII CCWGG 1 cut(s) 2292
EcoT14I CCWWGG 1 cut(s) 2025
EcoT22I ATGCAT 1 cut(s) 1542
ErhI CCWWGG 1 cut(s) 2025
FaeI CATG 9 cut(s) 1186, 1544, 1556, 1753, 1966, 2029, 2285, 2605, 2679
FalI AAGNNNNNCTT 2 cut(s) 2204, 2236
FatI CATG 9 cut(s) 1182, 1540, 1552, 1749, 1962, 2025, 2281, 2601, 2675
FblI GTMKAC 1 cut(s) 1611
Fnu4HI GCNGC 7 cut(s) 118, 164, 1161, 1335, 1813, 2249, 2309
FokI GGATG 9 cut(s) 164, 212, 605, 655, 1399, 1496, 2383, 2542, 2870
Fsp4HI GCNGC 7 cut(s) 118, 164, 1161, 1335, 1813, 2249, 2309
FspBI CTAG 8 cut(s) 180, 239, 356, 834, 869, 1052, 2039, 2261
GlaI GCGC 2 cut(s) 2208, 2361
GluI GCNGC 7 cut(s) 118, 164, 1161, 1335, 1813, 2249, 2309
GsuI CTGGAG 1 cut(s) 2315
HaeIII GGCC 3 cut(s) 1301, 2308, 2803
HapII CCGG 5 cut(s) 1703, 1910, 2747, 2846, 2855
HgaI GACGC 1 cut(s) 2752
HhaI GCGC 2 cut(s) 2209, 2362
Hin1I GRCGYC 1 cut(s) 2744
Hin1II CATG 9 cut(s) 1186, 1544, 1556, 1753, 1966, 2029, 2285, 2605, 2679
Hin6I GCGC 2 cut(s) 2207, 2360
HinP1I GCGC 2 cut(s) 2207, 2360
HincII GTYRAC 1 cut(s) 232
HindII GTYRAC 1 cut(s) 232
HindIII AAGCTT 2 cut(s) 2140, 2234
HinfI GANTC 3 cut(s) 76, 1742, 2170
HpaII CCGG 5 cut(s) 1703, 1910, 2747, 2846, 2855
HphI GGTGA 8 cut(s) 757, 976, 1133, 1692, 2123, 2581, 2666, 2896
Hpy166II GTNNAC 4 cut(s) 232, 882, 1612, 2640
Hpy8I GTNNAC 4 cut(s) 232, 882, 1612, 2640
Hpy99I CGWCG 1 cut(s) 2781
HpyAV CCTTC 9 cut(s) 307, 593, 941, 1189, 2108, 2185, 2206, 2602, 2618
HpyCH4IV ACGT 3 cut(s) 234, 1655, 1723
HpyF10VI GCNNNNNNNGC 6 cut(s) 137, 668, 1755, 2213, 2743, 2800
HpySE526I ACGT 3 cut(s) 234, 1655, 1723
Hsp92I GRCGYC 1 cut(s) 2744
Hsp92II CATG 9 cut(s) 1186, 1544, 1556, 1753, 1966, 2029, 2285, 2605, 2679
HspAI GCGC 2 cut(s) 2207, 2360
Kzo9I GATC 9 cut(s) 730, 1017, 1240, 1469, 2131, 2317, 2393, 2842, 2901
LmnI GCTCC 1 cut(s) 1001
Lsp1109I GCAGC 5 cut(s) 129, 175, 1147, 1321, 1799
LweI GCATC 3 cut(s) 142, 2320, 2361
MaeI CTAG 8 cut(s) 180, 239, 356, 834, 869, 1052, 2039, 2261
MaeII ACGT 3 cut(s) 234, 1655, 1723
MaeIII GTNAC 7 cut(s) 40, 964, 1142, 1389, 1719, 2033, 2301
MalI GATC 9 cut(s) 732, 1019, 1242, 1471, 2133, 2319, 2395, 2844, 2903
MboI GATC 9 cut(s) 730, 1017, 1240, 1469, 2131, 2317, 2393, 2842, 2901
MfeI CAATTG 1 cut(s) 35
MflI RGATCY 6 cut(s) 730, 1240, 2131, 2317, 2393, 2842
MhlI GDGCHC 2 cut(s) 147, 1180
MmeI TCCRAC 7 cut(s) 177, 789, 2348, 2393, 2482, 2611, 2759
Mph1103I ATGCAT 1 cut(s) 1542
MroXI GAANNNNTTC 3 cut(s) 1266, 1833, 2826
MspA1I CMGCKG 1 cut(s) 2713
MspCI CTTAAG 1 cut(s) 491
MspI CCGG 5 cut(s) 1703, 1910, 2747, 2846, 2855
MspR9I CCNGG 1 cut(s) 2294
MssI GTTTAAAC 1 cut(s) 912
MunI CAATTG 1 cut(s) 35
Mva1269I GAATGC 2 cut(s) 94, 2796
MvaI CCWGG 1 cut(s) 2294
MvnI CGCG 2 cut(s) 2360, 2424
MwoI GCNNNNNNNGC 6 cut(s) 137, 668, 1755, 2213, 2743, 2800
NcoI CCATGG 1 cut(s) 2025
NdeII GATC 9 cut(s) 730, 1017, 1240, 1469, 2131, 2317, 2393, 2842, 2901
NlaIII CATG 9 cut(s) 1186, 1544, 1556, 1753, 1966, 2029, 2285, 2605, 2679
NlaIV GGNNCC 4 cut(s) 611, 1302, 2353, 2844
NmeAIII GCCGAG 1 cut(s) 2076
NmuCI GTSAC 2 cut(s) 964, 1389
NsiI ATGCAT 1 cut(s) 1542
NspI RCATGY 3 cut(s) 1753, 1966, 2605
PaeI GCATGC 1 cut(s) 1753
PaeR7I CTCGAG 2 cut(s) 146, 2165
PciI ACATGT 1 cut(s) 2601
PcsI WCGNNNNNNNCGW 1 cut(s) 2704
PctI GAATGC 2 cut(s) 94, 2796
PdmI GAANNNNTTC 3 cut(s) 1266, 1833, 2826
PfeI GAWTC 3 cut(s) 76, 1742, 2170
PflFI GACNNNGTC 1 cut(s) 815
PfoI TCCNGGA 1 cut(s) 2292
PinAI ACCGGT 1 cut(s) 1702
PkrI GCNGC 7 cut(s) 119, 165, 1162, 1336, 1814, 2250, 2310
PmeI GTTTAAAC 1 cut(s) 912
Ppu21I YACGTR 1 cut(s) 1724
PpuMI RGGWCCY 3 cut(s) 610, 1797, 2769
PscI ACATGT 1 cut(s) 2601
PshAI GACNNNNGTC 2 cut(s) 101, 2747
PshBI ATTAAT 1 cut(s) 2004
Psp5II RGGWCCY 3 cut(s) 610, 1797, 2769
Psp6I CCWGG 1 cut(s) 2292
PspEI GGTNACC 1 cut(s) 964
PspGI CCWGG 1 cut(s) 2292
PspN4I GGNNCC 4 cut(s) 611, 1302, 2353, 2844
PspPI GGNCC 8 cut(s) 610, 790, 882, 1300, 1642, 1797, 2769, 2802
PspPPI RGGWCCY 3 cut(s) 610, 1797, 2769
PspXI VCTCGAGB 1 cut(s) 146
PstNI CAGNNNCTG 2 cut(s) 2772, 2916
PsuI RGATCY 6 cut(s) 730, 1240, 2131, 2317, 2393, 2842
PsyI GACNNNGTC 1 cut(s) 815
PvuII CAGCTG 1 cut(s) 2713
RsaI GTAC 4 cut(s) 775, 1726, 2286, 2530
RsaNI GTAC 4 cut(s) 774, 1725, 2285, 2529
SatI GCNGC 7 cut(s) 118, 164, 1161, 1335, 1813, 2249, 2309
Sau3AI GATC 9 cut(s) 730, 1017, 1240, 1469, 2131, 2317, 2393, 2842, 2901
Sau96I GGNCC 8 cut(s) 610, 790, 882, 1300, 1642, 1797, 2769, 2802
ScrFI CCNGG 1 cut(s) 2294
SduI GDGCHC 2 cut(s) 147, 1180
SfaNI GCATC 3 cut(s) 142, 2320, 2361
SfcI CTRYAG 3 cut(s) 624, 1116, 1305
Sfr274I CTCGAG 2 cut(s) 146, 2165
SinI GGWCC 6 cut(s) 610, 790, 882, 1642, 1797, 2769
SlaI CTCGAG 2 cut(s) 146, 2165
SmlI CTYRAG 4 cut(s) 146, 491, 2165, 2405
SmoI CTYRAG 4 cut(s) 146, 491, 2165, 2405
SnaBI TACGTA 1 cut(s) 1724
SphI GCATGC 1 cut(s) 1753
SsiI CCGC 5 cut(s) 1186, 2224, 2248, 2309, 2358
SspI AATATT 1 cut(s) 537
SspMI CTAG 8 cut(s) 180, 239, 356, 834, 869, 1052, 2039, 2261
StyD4I CCNGG 1 cut(s) 2292
StyI CCWWGG 1 cut(s) 2025
TaiI ACGT 3 cut(s) 237, 1658, 1726
TaqI TCGA 8 cut(s) 147, 335, 522, 1452, 1875, 2145, 2166, 2820
TaqII GACCGA 1 cut(s) 899
TatI WGTACW 1 cut(s) 2284
TauI GCSGC 2 cut(s) 2251, 2311
TfiI GAWTC 3 cut(s) 76, 1742, 2170
TscAI CASTG 6 cut(s) 259, 830, 860, 1921, 1983, 2624
TseFI GTSAC 2 cut(s) 964, 1389
TseI GCWGC 5 cut(s) 117, 163, 1160, 1334, 1812
Tsp45I GTSAC 2 cut(s) 964, 1389
TspGWI ACGGA 2 cut(s) 1629, 1634
TspRI CASTG 6 cut(s) 259, 830, 860, 1921, 1983, 2624
Tth111I GACNNNGTC 1 cut(s) 815
Vha464I CTTAAG 1 cut(s) 491
VpaK11BI GGWCC 6 cut(s) 610, 790, 882, 1642, 1797, 2769
VspI ATTAAT 1 cut(s) 2004
XbaI TCTAGA 2 cut(s) 833, 868
XceI RCATGY 3 cut(s) 1753, 1966, 2605
XhoI CTCGAG 2 cut(s) 146, 2165
XmiI GTMKAC 1 cut(s) 1611
XmnI GAANNNNTTC 3 cut(s) 1266, 1833, 2826
XspI CTAG 8 cut(s) 180, 239, 356, 834, 869, 1052, 2039, 2261
Zsp2I ATGCAT 1 cut(s) 1542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.