Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 511 |
| AccIII | TCCGGA | 1 cut(s) | 62 |
| AciI | CCGC | 3 cut(s) | 345, 385, 511 |
| AclWI | GGATC | 1 cut(s) | 540 |
| AcuI | CTGAAG | 2 cut(s) | 387, 395 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 177, 486, 510 |
| AgsI | TTSAA | 4 cut(s) | 225, 232, 238, 316 |
| AluBI | AGCT | 6 cut(s) | 93, 185, 204, 251, 320, 430 |
| AluI | AGCT | 6 cut(s) | 93, 185, 204, 251, 320, 430 |
| Alw21I | GWGCWC | 1 cut(s) | 415 |
| Alw26I | GTCTC | 1 cut(s) | 353 |
| AlwI | GGATC | 1 cut(s) | 540 |
| Aor13HI | TCCGGA | 1 cut(s) | 62 |
| AoxI | GGCC | 2 cut(s) | 370, 488 |
| ApeKI | GCWGC | 2 cut(s) | 185, 320 |
| AspS9I | GGNCC | 1 cut(s) | 437 |
| AsuHPI | GGTGA | 3 cut(s) | 148, 160, 345 |
| AvaII | GGWCC | 1 cut(s) | 437 |
| BaeGI | GKGCMC | 1 cut(s) | 403 |
| Bbv12I | GWGCWC | 1 cut(s) | 415 |
| BbvI | GCAGC | 2 cut(s) | 172, 307 |
| BccI | CCATC | 3 cut(s) | 129, 239, 293 |
| BcoDI | GTCTC | 1 cut(s) | 353 |
| BfaI | CTAG | 2 cut(s) | 431, 528 |
| BfmI | CTRYAG | 1 cut(s) | 46 |
| BisI | GCNGC | 2 cut(s) | 186, 321 |
| BlsI | GCNGC | 2 cut(s) | 187, 322 |
| Bme18I | GGWCC | 1 cut(s) | 437 |
| BmgT120I | GGNCC | 1 cut(s) | 437 |
| BmrI | ACTGGG | 1 cut(s) | 474 |
| BmsI | GCATC | 1 cut(s) | 156 |
| BmuI | ACTGGG | 1 cut(s) | 474 |
| BpmI | CTGGAG | 1 cut(s) | 98 |
| BpuEI | CTTGAG | 2 cut(s) | 157, 488 |
| BsaI | GGTCTC | 1 cut(s) | 353 |
| BsaJI | CCNNGG | 3 cut(s) | 263, 380, 504 |
| BsaWI | WCCGGW | 2 cut(s) | 62, 493 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 276, 306 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 177, 486, 510 |
| Bse1I | ACTGG | 1 cut(s) | 480 |
| BseAI | TCCGGA | 1 cut(s) | 62 |
| BseDI | CCNNGG | 3 cut(s) | 263, 380, 504 |
| BseGI | GGATG | 1 cut(s) | 304 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 177, 486, 510 |
| BseNI | ACTGG | 1 cut(s) | 480 |
| BseSI | GKGCMC | 1 cut(s) | 403 |
| BseXI | GCAGC | 2 cut(s) | 172, 307 |
| BshFI | GGCC | 2 cut(s) | 372, 490 |
| BsiHKAI | GWGCWC | 1 cut(s) | 415 |
| BsiSI | CCGG | 2 cut(s) | 63, 494 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 177, 486, 510 |
| BsmAI | GTCTC | 1 cut(s) | 353 |
| BsmI | GAATGC | 1 cut(s) | 72 |
| BsnI | GGCC | 2 cut(s) | 372, 490 |
| Bso31I | GGTCTC | 1 cut(s) | 353 |
| Bsp1286I | GDGCHC | 2 cut(s) | 403, 415 |
| Bsp13I | TCCGGA | 1 cut(s) | 62 |
| Bsp143I | GATC | 1 cut(s) | 532 |
| Bsp19I | CCATGG | 1 cut(s) | 263 |
| BspACI | CCGC | 3 cut(s) | 345, 385, 511 |
| BspANI | GGCC | 2 cut(s) | 372, 490 |
| BspEI | TCCGGA | 1 cut(s) | 62 |
| BspPI | GGATC | 1 cut(s) | 540 |
| BspTNI | GGTCTC | 1 cut(s) | 353 |
| BsrBI | CCGCTC | 1 cut(s) | 511 |
| BsrI | ACTGG | 1 cut(s) | 480 |
| BssECI | CCNNGG | 3 cut(s) | 263, 380, 504 |
| BssMI | GATC | 1 cut(s) | 532 |
| BssT1I | CCWWGG | 2 cut(s) | 263, 380 |
| Bst6I | CTCTTC | 1 cut(s) | 265 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 549 |
| BstC8I | GCNNGC | 1 cut(s) | 541 |
| BstDSI | CCRYGG | 1 cut(s) | 263 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 175 |
| BstF5I | GGATG | 1 cut(s) | 304 |
| BstKTI | GATC | 1 cut(s) | 535 |
| BstMAI | GTCTC | 1 cut(s) | 353 |
| BstMBI | GATC | 1 cut(s) | 532 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 549 |
| BstNSI | RCATGY | 1 cut(s) | 523 |
| BstSFI | CTRYAG | 1 cut(s) | 46 |
| BstSLI | GKGCMC | 1 cut(s) | 403 |
| BstV1I | GCAGC | 2 cut(s) | 172, 307 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 204 |
| BsuRI | GGCC | 2 cut(s) | 372, 490 |
| BtgI | CCRYGG | 1 cut(s) | 263 |
| BtsCI | GGATG | 1 cut(s) | 304 |
| BtsI | GCAGTG | 1 cut(s) | 191 |
| BtsIMutI | CAGTG | 2 cut(s) | 191, 487 |
| Cac8I | GCNNGC | 1 cut(s) | 541 |
| Cfr13I | GGNCC | 1 cut(s) | 437 |
| CviAII | CATG | 3 cut(s) | 264, 359, 520 |
| DpnI | GATC | 1 cut(s) | 534 |
| DpnII | GATC | 1 cut(s) | 532 |
| Eam1104I | CTCTTC | 1 cut(s) | 265 |
| EarI | CTCTTC | 1 cut(s) | 265 |
| Eco130I | CCWWGG | 2 cut(s) | 263, 380 |
| Eco147I | AGGCCT | 1 cut(s) | 372 |
| Eco31I | GGTCTC | 1 cut(s) | 353 |
| Eco47I | GGWCC | 1 cut(s) | 437 |
| Eco57I | CTGAAG | 2 cut(s) | 387, 395 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 175 |
| EcoT14I | CCWWGG | 2 cut(s) | 263, 380 |
| ErhI | CCWWGG | 2 cut(s) | 263, 380 |
| FaeI | CATG | 3 cut(s) | 267, 362, 523 |
| FaiI | YATR | 7 cut(s) | 27, 58, 265, 281, 331, 360, 521 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 450, 482 |
| FatI | CATG | 3 cut(s) | 263, 358, 519 |
| Fnu4HI | GCNGC | 2 cut(s) | 186, 321 |
| FokI | GGATG | 1 cut(s) | 311 |
| Fsp4HI | GCNGC | 2 cut(s) | 186, 321 |
| FspBI | CTAG | 2 cut(s) | 431, 528 |
| GluI | GCNGC | 2 cut(s) | 186, 321 |
| GsuI | CTGGAG | 1 cut(s) | 98 |
| HaeIII | GGCC | 2 cut(s) | 372, 490 |
| HapII | CCGG | 2 cut(s) | 63, 494 |
| Hin1II | CATG | 3 cut(s) | 267, 362, 523 |
| HinfI | GANTC | 2 cut(s) | 208, 217 |
| HpaII | CCGG | 2 cut(s) | 63, 494 |
| HphI | GGTGA | 3 cut(s) | 148, 160, 345 |
| Hpy166II | GTNNAC | 1 cut(s) | 88 |
| Hpy188I | TCNGA | 2 cut(s) | 108, 508 |
| Hpy188III | TCNNGA | 2 cut(s) | 63, 77 |
| Hpy8I | GTNNAC | 1 cut(s) | 88 |
| HpyAV | CCTTC | 4 cut(s) | 60, 299, 362, 428 |
| HpyCH4V | TGCA | 3 cut(s) | 72, 323, 523 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 549 |
| Hsp92II | CATG | 3 cut(s) | 267, 362, 523 |
| Kpn2I | TCCGGA | 1 cut(s) | 62 |
| Kzo9I | GATC | 1 cut(s) | 532 |
| LmnI | GCTCC | 4 cut(s) | 65, 248, 284, 508 |
| LpnPI | CCDG | 9 cut(s) | 3, 62, 76, 163, 190, 386, 493, 507, 525 |
| Lsp1109I | GCAGC | 2 cut(s) | 172, 307 |
| LweI | GCATC | 1 cut(s) | 156 |
| MaeI | CTAG | 2 cut(s) | 431, 528 |
| MalI | GATC | 1 cut(s) | 534 |
| MbiI | CCGCTC | 1 cut(s) | 511 |
| MboI | GATC | 1 cut(s) | 532 |
| MboII | GAAGA | 3 cut(s) | 254, 282, 327 |
| MhlI | GDGCHC | 2 cut(s) | 403, 415 |
| MluCI | AATT | 2 cut(s) | 198, 233 |
| MlyI | GAGTC | 1 cut(s) | 211 |
| MnlI | CCTC | 7 cut(s) | 73, 169, 288, 366, 463, 480, 514 |
| MroI | TCCGGA | 1 cut(s) | 62 |
| MspI | CCGG | 2 cut(s) | 63, 494 |
| Mva1269I | GAATGC | 1 cut(s) | 72 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 549 |
| NcoI | CCATGG | 1 cut(s) | 263 |
| NdeII | GATC | 1 cut(s) | 532 |
| NlaIII | CATG | 3 cut(s) | 267, 362, 523 |
| NspI | RCATGY | 1 cut(s) | 523 |
| PceI | AGGCCT | 1 cut(s) | 372 |
| PctI | GAATGC | 1 cut(s) | 72 |
| PfeI | GAWTC | 1 cut(s) | 208 |
| PkrI | GCNGC | 2 cut(s) | 187, 322 |
| PleI | GAGTC | 1 cut(s) | 211 |
| PpsI | GAGTC | 1 cut(s) | 211 |
| PspPI | GGNCC | 1 cut(s) | 437 |
| SatI | GCNGC | 2 cut(s) | 186, 321 |
| Sau3AI | GATC | 1 cut(s) | 532 |
| Sau96I | GGNCC | 1 cut(s) | 437 |
| SchI | GAGTC | 1 cut(s) | 211 |
| SduI | GDGCHC | 2 cut(s) | 403, 415 |
| SfaNI | GCATC | 1 cut(s) | 156 |
| SfcI | CTRYAG | 1 cut(s) | 46 |
| SinI | GGWCC | 1 cut(s) | 437 |
| SmlI | CTYRAG | 2 cut(s) | 136, 467 |
| SmoI | CTYRAG | 2 cut(s) | 136, 467 |
| Sse9I | AATT | 2 cut(s) | 198, 233 |
| SseBI | AGGCCT | 1 cut(s) | 372 |
| SsiI | CCGC | 3 cut(s) | 345, 385, 511 |
| SspMI | CTAG | 2 cut(s) | 431, 528 |
| StuI | AGGCCT | 1 cut(s) | 372 |
| StyI | CCWWGG | 2 cut(s) | 263, 380 |
| TasI | AATT | 2 cut(s) | 198, 233 |
| TfiI | GAWTC | 1 cut(s) | 208 |
| TscAI | CASTG | 2 cut(s) | 198, 487 |
| TseI | GCWGC | 2 cut(s) | 185, 320 |
| TspDTI | ATGAA | 4 cut(s) | 42, 105, 255, 440 |
| TspRI | CASTG | 2 cut(s) | 198, 487 |
| VpaK11BI | GGWCC | 1 cut(s) | 437 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 175 |
| XceI | RCATGY | 1 cut(s) | 523 |
| XspI | CTAG | 2 cut(s) | 431, 528 |