RchiOBHm_Chr1g0368631

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
58654591 .. 58665629
11039 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59296

Sequence Viewer

Length: 2904 bp
ATGGCTGAAGTACTTGTTAACGTTCTCCTTGAGCGTTTGGCTACGATCACCCTTGACAAGGTCGGAGGAGAGTTCAAACTGGTCACTGGTGTTGAGAAAGAAGTCAAGAGCCTCACCCGCAATCTCGAAGCTATTCAAGCTGTGCTCGAGGATGCAGAGCAGAGACAAGTCACCGAGGCCACCGTGAGACGTTGGCTGAGTGTACTGACTGAAGTTTCCTTCGACATGGATGACGTGTTGGATGAGTGGATAACTGAAGTTCTGAAGCAACAAATGGAGAAACAAGAAAAACAAGGTGAAAATGCTCTTATTGTTACTACTAAGAAGAAGGTATGCTTCCCCTTCCTTTCCTCTTGCTTTTGTTTCGGCCAAGTCAATCAGTTAATGCTTCGTCACGATATCGCTGTGAGAATAAAAGACCTAAATGAAAGAATAGCTTCGATTGCTAAAGAAAAACAAGATTTTAGCTTTCAAAACATCACAAGGGTCTCCGAATTACCTGAACGACCAAAAACTACTTCTCTTCCTAATGTTAAAACATTCGGTCGAGATGAGGAAAAAAGCCTCATAGCCAGCAAGCTGCTGAGTGAGAGTAGTGAGGGAAATGAGGTTCCTCTTATCATCCCTATTGTAGGGATGGGGGGAATGGGCAAAACAACTCTTGCTCAATTTGTTTATAATGATGAAGAGGTCAAATCTCATTTTAACAAGAGAATATGGGTCTGTGTCTCAGACCCTTTTGATGAGATCAAGATTGCTCAAGCTATCATTGAAGAAATAGATAAAGATAATAGTTCAAAAAGCTCAAATGTGTTGCAAACCCTGACGCAATGTATATATAAATTGATTAAGGGTAAAAAGTTTCTCCTGGTTTTAGATGATGTTTGGAGCCCAAACTCTGATCAATGGGAAGAATTGATCAAACCTTTACGTTATGGTGCTACTGGTAGTAGAGTATTGGTGACCACTAGAAAGGAGGAGGTTGCTACTTTAATGAAAGCAACAACGACTCAAATGATCTCTTTGAAGGCATTGAGCGATGCATTTTGTTTGTCATTGTTCTATTACAGTGCAAACATGGACGAGAATAATGTGTCTAAAGAGTATAAAGATATTGGATTGAAGATTGTGAAAAGGTGTAATGGGTTGCCTCTTGCTGCAAAGACATTAGGAAGCCTGATGCGCAATAAGAAAAAGATTCATGAATGGCAAGCTGTTTTACAGAGCAAGACATGGGAATTGAAAGAGATTCAACAAGATGTTTTTCGACCACTACTACTAAGTTATCATGATTTGACTCCAGCAACCAAACGTTGTCTTTTGTATTGTGTTACATTTCCAAAAGATTACGTGTACGATAGGAATTATTTGATTGAGTTATGGATGTCGCAAGATTATTTGAATGACAAAGACAATAAAGAAAAGATAGTAGTTGGTCAAAATTATTTTGATGACTTAGCAATGCGGTCATTTTTTCAAGATATTGAGGTAGATGATGAGAATGGAAACATAAAATGCAAAATTCATGATATTGTACATGACTTTCTACAATATTTGACCAAGCATGAATGTTTGATTTTGGATTTTGAGTTGGATGCTAGTGAGAGAAGGGATGTGTCAAAGGATAACATTCGACATTTGACTTTAGTGCACGCAACAGGGAATGAGTCATTGGCACATTTTCTCCTCAATTGTAAAAAATTACGTACCTTGATGGCTATAGATTCATCCAAAAATTCCATTGGCCCATTGTTTGAGTTGATAGTACAATTGAAATGCCTTAGAACATTAAGCTTGTGTGGTCGGTGGAGGGAGAGTAGTCTCAGAGAAATTCCCGAGACGATAGGTGGATTGATACATTTGAGGTATCTTGATTTATCCGATAATAACGAGTTGGAAGAATTACCCAGCTCCCTGGGCAGCTTATACAACCTGCAAACCTTGCGACTTGTTGAATGCTGGAATCTCAAAGAAATTCCCGAGACGATAGGTGGATTGATACATATTAGGTATCTTGATTTATCCAAAAATAATAAGTTGGAGAAATTACCCAGCGCCCTGGGCAGCTTATACAACCTGCAAACCTTGCGACTTGTTTGTTGCTTGAGACTCAAAAAAGTAGATGTGCGAGGGCTGATTAACTTGAGGCATCTTTATGTTGAAGAATGTGAGAAGCTAGAGTTAATTAAAGGGATTGAGCAATTAACAGATATGCAAAGGCTAGATGAGTTTCATGTCGGAGATGGTGATGAAGAAAACAAGTTGGTAGATCTGAAAGACTTGAACCAGCTTCAAGGGAGTCTTGATATTCGTATTCGAGGAAATCCAAATATGGCGGAGAATGCAGCAGCAATTATGGTGAATAAGGCTCACCTCCTGCAATTGAGGCTAGTTTTCCCTTTGGATTCTGATGAAGGAGAGAGTAGAGAAATTATGAATGGCTTAGAGCCGCATCCAAGTTTGGAATCTTTATCCATCGACAAGTATAGAGGCGGCGCCTTCTCCCATTGGTTGTTGTCTTTAGCCAGCTTGAGAATGCTCAGCCTTGAGACTTGCACGGAATGTGGGGTTTTGCCTCCTTTAGGGAAACTGGCGTCCCTTGAATCGTTGTCCATTTCGAATCTCGCAAGAGTCTCAAAGGTAGGAATTGAGTTTTTGGGAATAGATGATGTGCAAACCTCGTCGTCTTCCATTTTCATATCATTCCCCAAGCTGGAACAACTCCACTTCTTCGAAATGTGGTCATGGGAAGAGTGGGTAGGAGTGGAAAATAATAATATTACAATCATGCCACGCCTCTCTTACATGACAATCCATGGCTGCGACAAGCTAAAAGGACTGCCGGACTTCCTGCGGAAGACACCACTACGGGACTTGGACATCAGAAGCAGCTTTGAGTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

967

Amino Acids

110.49

Weight (kDa)

5.57

Isoelectric Point (pI)

43.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 96 2.1e-23 Rx N-terminal domain
NB-ARC PF00931 191 - 361 8.9e-37 NB-ARC domain
WHD_DRP PF23559 446 - 515 6.2e-21 Disease resistance protein Winged helix domain
LRR_14 PF23598 567 - 666 5.3e-11 Leucine-rich repeat region
LRR_14 PF23598 662 - 935 7.4e-20 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 756 - 874 1.3e-25 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 678
Acc16I TGCGCA 1 cut(s) 1184
Acc36I ACCTGC 2 cut(s) 1941, 2085
AccB1I GGYRCC 1 cut(s) 2495
AciI CCGC 6 cut(s) 118, 1465, 2336, 2450, 2493, 2854
AclI AACGTT 2 cut(s) 21, 1312
AcoI YGGCCR 1 cut(s) 367
AcsI RAATTY 4 cut(s) 1521, 1735, 1830, 1974
AcuI CTGAAG 4 cut(s) 27, 231, 276, 284
AcyI GRCGYC 2 cut(s) 2496, 2594
AfaI GTAC 6 cut(s) 12, 204, 1355, 1536, 1708, 1767
AfiI CCNNNNNNNGG 4 cut(s) 58, 632, 2582, 2713
AflIII ACRYGT 2 cut(s) 234, 1350
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 3 cut(s) 867, 1914, 2058
AjuI GAANNNNNNNTTGG 4 cut(s) 502, 534, 1655, 1687
AloI GAACNNNNNNTCC 2 cut(s) 594, 626
Alw21I GWGCWC 2 cut(s) 147, 1653
Alw44I GTGCAC 1 cut(s) 1649
Ama87I CYCGRG 3 cut(s) 146, 1835, 1979
AoxI GGCC 3 cut(s) 177, 367, 1744
ApaLI GTGCAC 1 cut(s) 1649
ApeKI GCWGC 8 cut(s) 580, 1157, 1920, 2064, 2345, 2348, 2820, 2889
ApoI RAATTY 4 cut(s) 1521, 1735, 1830, 1974
Asp700I GAANNNNTTC 2 cut(s) 132, 436
AspLEI GCGC 3 cut(s) 1185, 2057, 2498
AspS9I GGNCC 1 cut(s) 1745
AsuHPI GGTGA 8 cut(s) 40, 106, 163, 308, 973, 2258, 2363, 2371
AsuII TTCGAA 2 cut(s) 2618, 2733
AvaI CYCGRG 3 cut(s) 146, 1835, 1979
BaeGI GKGCMC 1 cut(s) 1653
BanI GGYRCC 1 cut(s) 2495
BanII GRGCYC 1 cut(s) 893
BbsI GAAGAC 2 cut(s) 2679, 2864
Bbv12I GWGCWC 2 cut(s) 147, 1653
BbvI GCAGC 7 cut(s) 567, 1144, 1932, 2076, 2357, 2360, 2807
BccI CCATC 4 cut(s) 631, 1708, 2237, 2483
BciT130I CCWGG 3 cut(s) 869, 1916, 2060
BclI TGATCA 2 cut(s) 901, 918
BfaI CTAG 5 cut(s) 969, 1599, 2177, 2222, 2390
BfmI CTRYAG 1 cut(s) 1719
BfoI RGCGCY 2 cut(s) 2058, 2499
BfuAI ACCTGC 2 cut(s) 1941, 2085
BglII AGATCT 1 cut(s) 2269
BlpI GCTNAGC 1 cut(s) 2540
BmcAI AGTACT 1 cut(s) 12
Bme1390I CCNGG 3 cut(s) 869, 1916, 2060
BmeT110I CYCGRG 3 cut(s) 146, 1835, 1979
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 1 cut(s) 1745
BmiI GGNNCC 3 cut(s) 612, 890, 2497
BmrFI CCNGG 3 cut(s) 869, 1916, 2060
BmsI GCATC 6 cut(s) 142, 1030, 1170, 1585, 2158, 2461
BpiI GAAGAC 2 cut(s) 2679, 2864
BpmI CTGGAG 1 cut(s) 1284
Bpu1102I GCTNAGC 1 cut(s) 2540
Bpu14I TTCGAA 2 cut(s) 2618, 2733
BpuEI CTTGAG 6 cut(s) 50, 744, 2125, 2164, 2551, 2567
BsaAI YACGTR 2 cut(s) 1351, 1706
BsaHI GRCGYC 2 cut(s) 2496, 2594
BsaI GGTCTC 1 cut(s) 493
BsaJI CCNNGG 6 cut(s) 174, 1914, 1915, 2058, 2059, 2815
BsaXI ACNNNNNCTCC 4 cut(s) 1668, 1698, 1801, 1831
Bsc4I CCNNNNNNNGG 4 cut(s) 58, 632, 2582, 2713
Bse1I ACTGG 4 cut(s) 84, 91, 949, 2595
Bse3DI GCAATG 2 cut(s) 836, 1467
BseBI CCWGG 3 cut(s) 869, 1916, 2060
BseDI CCNNGG 6 cut(s) 174, 1914, 1915, 2058, 2059, 2815
BseLI CCNNNNNNNGG 4 cut(s) 58, 632, 2582, 2713
BseMI GCAATG 2 cut(s) 836, 1467
BseMII CTCAG 5 cut(s) 188, 575, 744, 1837, 2554
BseNI ACTGG 4 cut(s) 84, 91, 949, 2595
BseRI GAGGAG 3 cut(s) 81, 992, 1676
BseSI GKGCMC 1 cut(s) 1653
BseXI GCAGC 7 cut(s) 567, 1144, 1932, 2076, 2357, 2360, 2807
BseYI CCCAGC 2 cut(s) 1907, 2051
Bsh1285I CGRYCG 1 cut(s) 547
BshFI GGCC 3 cut(s) 179, 369, 1746
BshNI GGYRCC 1 cut(s) 2495
BsiEI CGRYCG 1 cut(s) 547
BsiHKAI GWGCWC 2 cut(s) 147, 1653
BsiHKCI CYCGRG 3 cut(s) 146, 1835, 1979
BsiSI CCGG 1 cut(s) 2843
BslFI GGGAC 2 cut(s) 2581, 2885
BslI CCNNNNNNNGG 4 cut(s) 58, 632, 2582, 2713
BsmBI CGTCTC 3 cut(s) 181, 1832, 1976
BsmFI GGGAC 2 cut(s) 2581, 2885
BsmI GAATGC 3 cut(s) 1961, 2347, 2541
BsnI GGCC 3 cut(s) 179, 369, 1746
Bso31I GGTCTC 1 cut(s) 493
BsoBI CYCGRG 3 cut(s) 146, 1835, 1979
Bsp119I TTCGAA 2 cut(s) 2618, 2733
Bsp1286I GDGCHC 3 cut(s) 147, 893, 1653
Bsp1407I TGTACA 1 cut(s) 1534
Bsp143I GATC 6 cut(s) 45, 747, 901, 918, 1017, 2269
Bsp1720I GCTNAGC 1 cut(s) 2540
Bsp19I CCATGG 1 cut(s) 2815
BspACI CCGC 6 cut(s) 118, 1465, 2336, 2450, 2493, 2854
BspANI GGCC 3 cut(s) 179, 369, 1746
BspCNI CTCAG 5 cut(s) 189, 576, 743, 1836, 2553
BspHI TCATGA 3 cut(s) 1201, 1288, 1525
BspLI GGNNCC 3 cut(s) 612, 890, 2497
BspMI ACCTGC 2 cut(s) 1941, 2085
BspT104I TTCGAA 2 cut(s) 2618, 2733
BspT107I GGYRCC 1 cut(s) 2495
BspTNI GGTCTC 1 cut(s) 493
BsrDI GCAATG 2 cut(s) 836, 1467
BsrGI TGTACA 1 cut(s) 1534
BsrI ACTGG 4 cut(s) 84, 91, 949, 2595
BssECI CCNNGG 6 cut(s) 174, 1914, 1915, 2058, 2059, 2815
BssMI GATC 6 cut(s) 45, 747, 901, 918, 1017, 2269
BssNI GRCGYC 2 cut(s) 2496, 2594
BssT1I CCWWGG 1 cut(s) 2815
Bst2UI CCWGG 3 cut(s) 869, 1916, 2060
Bst4CI ACNGT 2 cut(s) 184, 1070
Bst6I CTCTTC 3 cut(s) 528, 681, 2745
BstACI GRCGYC 2 cut(s) 2496, 2594
BstAPI GCANNNNNTGC 2 cut(s) 1942, 2086
BstAUI TGTACA 1 cut(s) 1534
BstBAI YACGTR 2 cut(s) 1351, 1706
BstBI TTCGAA 2 cut(s) 2618, 2733
BstC8I GCNNGC 5 cut(s) 574, 578, 1212, 1653, 2527
BstDSI CCRYGG 1 cut(s) 2815
BstEII GGTNACC 1 cut(s) 961
BstENI CCTNNNNNAGG 3 cut(s) 56, 630, 2580
BstH2I RGCGCY 2 cut(s) 2058, 2499
BstHHI GCGC 3 cut(s) 1185, 2057, 2498
BstKTI GATC 6 cut(s) 48, 750, 904, 921, 1020, 2272
BstMBI GATC 6 cut(s) 45, 747, 901, 918, 1017, 2269
BstMCI CGRYCG 1 cut(s) 547
BstNI CCWGG 3 cut(s) 869, 1916, 2060
BstPI GGTNACC 1 cut(s) 961
BstSCI CCNGG 3 cut(s) 867, 1914, 2058
BstSFI CTRYAG 1 cut(s) 1719
BstSLI GKGCMC 1 cut(s) 1653
BstSNI TACGTA 1 cut(s) 1706
BstV1I GCAGC 7 cut(s) 567, 1144, 1932, 2076, 2357, 2360, 2807
BstV2I GAAGAC 2 cut(s) 2679, 2864
BstX2I RGATCY 1 cut(s) 2269
BstXI CCANNNNNNTGG 2 cut(s) 1915, 2059
BstYI RGATCY 1 cut(s) 2269
BsuRI GGCC 3 cut(s) 179, 369, 1746
BtgI CCRYGG 1 cut(s) 2815
BtgZI GCGATG 1 cut(s) 1053
BtrI CACGTC 1 cut(s) 235
BtsIMutI CAGTG 2 cut(s) 84, 1075
BveI ACCTGC 2 cut(s) 1941, 2085
Cac8I GCNNGC 5 cut(s) 574, 578, 1212, 1653, 2527
CciI TCATGA 3 cut(s) 1201, 1288, 1525
CfoI GCGC 3 cut(s) 1185, 2057, 2498
Cfr13I GGNCC 1 cut(s) 1745
CseI GACGC 2 cut(s) 835, 2583
Csp6I GTAC 6 cut(s) 11, 203, 1354, 1535, 1707, 1766
CviQI GTAC 6 cut(s) 11, 203, 1354, 1535, 1707, 1766
DinI GGCGCC 1 cut(s) 2497
DpnI GATC 6 cut(s) 47, 749, 903, 920, 1019, 2271
DpnII GATC 6 cut(s) 45, 747, 901, 918, 1017, 2269
EaeI YGGCCR 1 cut(s) 367
Eam1104I CTCTTC 3 cut(s) 528, 681, 2745
EarI CTCTTC 3 cut(s) 528, 681, 2745
EciI GGCGGA 1 cut(s) 2351
Eco105I TACGTA 1 cut(s) 1706
Eco130I CCWWGG 1 cut(s) 2815
Eco24I GRGCYC 1 cut(s) 893
Eco31I GGTCTC 1 cut(s) 493
Eco32I GATATC 1 cut(s) 400
Eco57I CTGAAG 4 cut(s) 27, 231, 276, 284
Eco88I CYCGRG 3 cut(s) 146, 1835, 1979
Eco91I GGTNACC 1 cut(s) 961
EcoNI CCTNNNNNAGG 3 cut(s) 56, 630, 2580
EcoO65I GGTNACC 1 cut(s) 961
EcoRII CCWGG 3 cut(s) 867, 1914, 2058
EcoRV GATATC 1 cut(s) 400
EcoT14I CCWWGG 1 cut(s) 2815
EcoT22I ATGCAT 1 cut(s) 1045
EcoT38I GRGCYC 1 cut(s) 893
EgeI GGCGCC 1 cut(s) 2497
EheI GGCGCC 1 cut(s) 2497
ErhI CCWWGG 1 cut(s) 2815
Esp3I CGTCTC 3 cut(s) 181, 1832, 1976
FalI AAGNNNNNCTT 6 cut(s) 320, 352, 421, 453, 2286, 2318
FaqI GGGAC 2 cut(s) 2581, 2885
FauI CCCGC 1 cut(s) 125
FbaI TGATCA 2 cut(s) 901, 918
FriOI GRGCYC 1 cut(s) 893
FspBI CTAG 5 cut(s) 969, 1599, 2177, 2222, 2390
FspI TGCGCA 1 cut(s) 1184
GlaI GCGC 3 cut(s) 1184, 2056, 2497
GsaI CCCAGC 2 cut(s) 1911, 2055
GsuI CTGGAG 1 cut(s) 1284
HaeII RGCGCY 2 cut(s) 2058, 2499
HaeIII GGCC 3 cut(s) 179, 369, 1746
HapII CCGG 1 cut(s) 2843
HgaI GACGC 2 cut(s) 835, 2583
HhaI GCGC 3 cut(s) 1185, 2057, 2498
Hin1I GRCGYC 2 cut(s) 2496, 2594
Hin6I GCGC 3 cut(s) 1183, 2055, 2496
HinP1I GCGC 3 cut(s) 1183, 2055, 2496
HincII GTYRAC 1 cut(s) 19
HindII GTYRAC 1 cut(s) 19
HindIII AAGCTT 1 cut(s) 1792
HpaI GTTAAC 1 cut(s) 19
HpaII CCGG 1 cut(s) 2843
HphI GGTGA 8 cut(s) 40, 106, 163, 308, 973, 2258, 2363, 2371
Hpy166II GTNNAC 4 cut(s) 19, 203, 1354, 1651
Hpy8I GTNNAC 4 cut(s) 19, 203, 1354, 1651
Hpy99I CGWCG 1 cut(s) 2686
HpyAV CCTTC 7 cut(s) 229, 322, 352, 1021, 1602, 2408, 2509
HpyCH4III ACNGT 2 cut(s) 184, 1070
HpyCH4IV ACGT 7 cut(s) 21, 190, 234, 931, 1312, 1350, 1705
HpySE526I ACGT 7 cut(s) 21, 190, 234, 931, 1312, 1350, 1705
Hsp92I GRCGYC 2 cut(s) 2496, 2594
HspAI GCGC 3 cut(s) 1183, 2055, 2496
KasI GGCGCC 1 cut(s) 2495
Ksp22I TGATCA 2 cut(s) 901, 918
KspAI GTTAAC 1 cut(s) 19
Kzo9I GATC 6 cut(s) 45, 747, 901, 918, 1017, 2269
LmnI GCTCC 2 cut(s) 888, 1916
Lsp1109I GCAGC 7 cut(s) 567, 1144, 1932, 2076, 2357, 2360, 2807
LweI GCATC 6 cut(s) 142, 1030, 1170, 1585, 2158, 2461
MaeI CTAG 5 cut(s) 969, 1599, 2177, 2222, 2390
MaeII ACGT 7 cut(s) 21, 190, 234, 931, 1312, 1350, 1705
MaeIII GTNAC 6 cut(s) 82, 169, 313, 392, 961, 1330
MalI GATC 6 cut(s) 47, 749, 903, 920, 1019, 2271
MboI GATC 6 cut(s) 45, 747, 901, 918, 1017, 2269
MfeI CAATTG 3 cut(s) 1690, 1769, 2381
MflI RGATCY 1 cut(s) 2269
MhlI GDGCHC 3 cut(s) 147, 893, 1653
Mly113I GGCGCC 1 cut(s) 2496
MlyI GAGTC 6 cut(s) 1003, 1291, 1676, 2103, 2308, 2640
MmeI TCCRAC 6 cut(s) 43, 219, 1572, 1875, 2019, 2218
Mph1103I ATGCAT 1 cut(s) 1045
MroXI GAANNNNTTC 2 cut(s) 132, 436
MslI CAYNNNNRTG 1 cut(s) 2154
MspI CCGG 1 cut(s) 2843
MspR9I CCNGG 3 cut(s) 869, 1916, 2060
MunI CAATTG 3 cut(s) 1690, 1769, 2381
Mva1269I GAATGC 3 cut(s) 1961, 2347, 2541
MvaI CCWGG 3 cut(s) 869, 1916, 2060
NarI GGCGCC 1 cut(s) 2496
NcoI CCATGG 1 cut(s) 2815
NdeII GATC 6 cut(s) 45, 747, 901, 918, 1017, 2269
NlaIV GGNNCC 3 cut(s) 612, 890, 2497
NmuCI GTSAC 4 cut(s) 82, 169, 392, 961
NsbI TGCGCA 1 cut(s) 1184
NsiI ATGCAT 1 cut(s) 1045
NspV TTCGAA 2 cut(s) 2618, 2733
PacI TTAATTAA 1 cut(s) 2187
PaeR7I CTCGAG 1 cut(s) 146
PagI TCATGA 3 cut(s) 1201, 1288, 1525
PasI CCCWGGG 2 cut(s) 1915, 2059
PctI GAATGC 3 cut(s) 1961, 2347, 2541
PdmI GAANNNNTTC 2 cut(s) 132, 436
PfeI GAWTC 8 cut(s) 1198, 1249, 1724, 1963, 2405, 2465, 2603, 2620
PflFI GACNNNGTC 1 cut(s) 59
PleI GAGTC 6 cut(s) 1003, 1291, 1675, 2103, 2307, 2639
PluTI GGCGCC 1 cut(s) 2499
PpsI GAGTC 6 cut(s) 1003, 1291, 1675, 2103, 2307, 2639
Ppu21I YACGTR 2 cut(s) 1351, 1706
PsiI TTATAA 1 cut(s) 678
Psp1406I AACGTT 2 cut(s) 21, 1312
Psp6I CCWGG 3 cut(s) 867, 1914, 2058
PspEI GGTNACC 1 cut(s) 961
PspFI CCCAGC 2 cut(s) 1907, 2051
PspGI CCWGG 3 cut(s) 867, 1914, 2058
PspN4I GGNNCC 3 cut(s) 612, 890, 2497
PspPI GGNCC 1 cut(s) 1745
PspXI VCTCGAGB 1 cut(s) 146
PsuI RGATCY 1 cut(s) 2269
PsyI GACNNNGTC 1 cut(s) 59
RsaI GTAC 6 cut(s) 12, 204, 1355, 1536, 1708, 1767
RsaNI GTAC 6 cut(s) 11, 203, 1354, 1535, 1707, 1766
RseI CAYNNNNRTG 1 cut(s) 2154
Sau3AI GATC 6 cut(s) 45, 747, 901, 918, 1017, 2269
Sau96I GGNCC 1 cut(s) 1745
ScaI AGTACT 1 cut(s) 12
SchI GAGTC 6 cut(s) 1003, 1291, 1676, 2103, 2308, 2640
ScrFI CCNGG 3 cut(s) 869, 1916, 2060
SduI GDGCHC 3 cut(s) 147, 893, 1653
SfaNI GCATC 6 cut(s) 142, 1030, 1170, 1585, 2158, 2461
SfcI CTRYAG 1 cut(s) 1719
SfoI GGCGCC 1 cut(s) 2497
Sfr274I CTCGAG 1 cut(s) 146
SfuI TTCGAA 2 cut(s) 2618, 2733
SlaI CTCGAG 1 cut(s) 146
SmiMI CAYNNNNRTG 1 cut(s) 2154
SmlI CTYRAG 7 cut(s) 29, 146, 759, 2104, 2143, 2530, 2546
SmoI CTYRAG 7 cut(s) 29, 146, 759, 2104, 2143, 2530, 2546
SnaBI TACGTA 1 cut(s) 1706
SsiI CCGC 6 cut(s) 118, 1465, 2336, 2450, 2493, 2854
SspDI GGCGCC 1 cut(s) 2495
SspI AATATT 2 cut(s) 1553, 2779
SspMI CTAG 5 cut(s) 969, 1599, 2177, 2222, 2390
StyD4I CCNGG 3 cut(s) 867, 1914, 2058
StyI CCWWGG 1 cut(s) 2815
TaaI ACNGT 2 cut(s) 184, 1070
TaiI ACGT 7 cut(s) 24, 193, 237, 934, 1315, 1353, 1708
TaqII GACCGA 1 cut(s) 533
TatI WGTACW 4 cut(s) 10, 202, 1534, 1765
TauI GCSGC 2 cut(s) 2452, 2496
TfiI GAWTC 8 cut(s) 1198, 1249, 1724, 1963, 2405, 2465, 2603, 2620
TscAI CASTG 2 cut(s) 91, 1075
TseFI GTSAC 4 cut(s) 82, 169, 392, 961
TseI GCWGC 8 cut(s) 580, 1157, 1920, 2064, 2345, 2348, 2820, 2889
Tsp45I GTSAC 4 cut(s) 82, 169, 392, 961
TspGWI ACGGA 1 cut(s) 2573
TspRI CASTG 2 cut(s) 91, 1075
Tth111I GACNNNGTC 1 cut(s) 59
VneI GTGCAC 1 cut(s) 1649
XagI CCTNNNNNAGG 3 cut(s) 56, 630, 2580
XapI RAATTY 4 cut(s) 1521, 1735, 1830, 1974
XhoI CTCGAG 1 cut(s) 146
XmnI GAANNNNTTC 2 cut(s) 132, 436
XspI CTAG 5 cut(s) 969, 1599, 2177, 2222, 2390
ZrmI AGTACT 1 cut(s) 12
Zsp2I ATGCAT 1 cut(s) 1045
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.