Rmu_sc0000447.1_g000007

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000447.1
OG0000018
Physical Location & Seq
Forward (+)
41813 .. 49252
7440 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000447.1_g000007.1.cds

Sequence Viewer

Length: 3120 bp
atggctgaagcactcattttcgttctcctagaacaattggcttcaatcacccgtcaacaggtccaactacaagtgaaattggtagttgatgttaagaaagaaattgaaaatctctgccacaatttccaagctatagaagccgtgctcaaagatgcagaggagaggcaagtgaaggaggcttctgttaaattatggctggatgatttaaaggatgtgtccaacaagatggaggacgtgttggatgattggaacactgaaattctgaggctacaaattgagaaacaagataaagcagcgggaaatgctcttgaaatgaccaagaagaaggtatgtttatgcattcctactgctttcttttgttttggccaagttagtagagttatttttcgtcgcgacattgctcaaaagattaaagatctcagtgaaaggttagcaacaattgctaatatgaggcaaaattttaactttcagtacacaaaaagtggtattgaacatattgagcgacaaaagaccacttcttttgtcgatcaaacatttggtcgggtagatgaaaaaaaattcttggtgggcatgttgttgagtgagagtaatcttgaagggcaaagccccattgtcatcccgattgtagggatgggtggaatcgacccatttgatgagctcaacatagccaaaaccatcattggagcccttgatggaaatgtcaattccatttcaaatgacctagaagctttcttccgatgtgtgcacaagtctatcgaggggaaaaaatttctccttgtcttagatgatgtgtggaacctagactataggaagtgggaaaatttgaagctacctttacataatggtgccgtaggtagtaaaataatagtcactacacgaaaagaagaagtagctaggatgatgggagcacccgataacacaatcaatttgaaggtgttgagtgaagaaaattgttggtcactattcactagaattgcctttaccaatagaaaccaagatgagtgtcaaattttggaacctattggtaaggaaattgtaaagaagtgcaaagggttgccacttattgccaagactttaggtggtctcatgcgttgtaagaaaacaaagaaagaatggcaagatgttttgagtagtgagatatgggagttagacatagtggagcaacaagttttccaaccgttgttactaagttattatgatttaacttcaatgatcaagcgttgtctcttatattgtgttaccttcccaaaaaatcatataattgacaaagaaattttgattgagttgtggatgtcacaaggttttcttggttcatttgggaacaaagaaaagacaatgataaacattggagaatcatatttcgatatcttgataatgcgatctttcttccagaatttgaagaaagatgaatttggagatattgaacattgccaaatgcatgatattgtgcacgactttctccaatatttaaccaagaatgaatgtttaatggtcgagaaaaaaggtgttgaggagagaatagaatttccagcagacaataagctccgtcatttgaccataatgtttgcaccaataggacattttcccctttcttttgaccattgccaacgtctgcggaccattacaacatttaattgtaaaattacaagttttacgcgagagtttattttacaattaacatgcgtgaggacgttgaatttgagtgacaactatatcgaagaagttccggacgaggttggcgggttggtgcacttgaggtatttggatttatctcgtaatcggaggctgaagaaattacctgatagtttgtgtaatttagtcaatttgcaaaccttgcgagttgattggtgcattagccttgaaaagttccccgaggccatgggaaagttgactagcttgcagcatcttcatgctaatcttggtttttgcgacattgataaactgctgaagctgcccaaatcaattgcgatgttgaaaagtctacggacgctagatgttgaacctgtgttattaattgaagatgaaggtgaaggtggagatgaagaaggattgaggttaaataatttgagagacatggacgagcttcaggggaaactttggatcgtattaaagggcaaattgaaagatagtgatgcgtgtgatgtggagaaggccatattggtgaataagaaacaccttcttcatttgaaactagggttcgcctgtgcaagcgaaggcaaccagagtaccatcgaggaagcaatattgaaggtcttacaaccaaattcaaatcttgaatccttatggatcagaggttacaatggcagcaccctgttccccaattggacctcctctttaattaacttgaaaagcctaaccttctcttggtgcttggtttgtaactatgtgcctctttcagttttgggcaacttggggtctcttgagagactcagatttgatgacatgccacaagtgaaaaaggttggatttgagtactcacttgatcatcaagttatattgttccccaatctgaaacaactcgagttcgctgaaatgccggagtgggaagaatgggattatcatgagaatgatgctacttcatcgtcaccaacttttttcatgccacgcctttctactttatccattgaatggtgctataagctgaagacattgccagacttccttacaaggaagacgccgctgcttaagaagttgatcatcaacgattgtcccattgtctccaaaagctgcaaagacaggcaaggccagtgctcttccaagtccttcaagtttagaaggcagagtgaaacgcccatgtgcactactcggtttgctggcattgcgccaaccttcggggctatgccatctctcactgttatgccttcatcctgccctgcgctctgtgaatatgcacttctcggggggtggatgctcttccaaagccttcatgctttacgcccaatcattccggataacgcttgcatcctctgtattaccgcggctgctggcacagagttagcagatgcttattccccagatactgtcgttgcttcttctccgaatagagtccaccgatatgcgcaagcaagcgtagcgaatcacatagataagcccctacctgccagcgcagcgcgcggatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

1039

Amino Acids

118.34

Weight (kDa)

6.29

Isoelectric Point (pI)

48.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 3060
Acc36I ACCTGC 1 cut(s) 3106
AccB1I GGYRCC 1 cut(s) 845
AccB7I CCANNNNNTGG 1 cut(s) 2628
AccI GTMKAC 1 cut(s) 1981
AccII CGCG 5 cut(s) 393, 1657, 2978, 3112, 3114
AccIII TCCGGA 2 cut(s) 1726, 2947
AciI CCGC 7 cut(s) 296, 1615, 1740, 2678, 2976, 2978, 3114
AclWI GGATC 2 cut(s) 2108, 2294
AcoI YGGCCR 1 cut(s) 364
AcuI CTGAAG 5 cut(s) 27, 1808, 1967, 2069, 2663
AcyI GRCGYC 1 cut(s) 2675
AfaI GTAC 3 cut(s) 473, 2227, 2474
AfiI CCNNNNNNNGG 5 cut(s) 58, 626, 2364, 2628, 2831
AflII CTTAAG 1 cut(s) 2684
AflIII ACRYGT 1 cut(s) 234
AjiI CACGTC 1 cut(s) 235
AjuI GAANNNNNNNTTGG 2 cut(s) 2141, 2173
Alw21I GWGCWC 8 cut(s) 147, 660, 747, 910, 1452, 1752, 2753, 2801
Alw26I GTCTC 6 cut(s) 1088, 1229, 2064, 2419, 2421, 2722
Alw44I GTGCAC 4 cut(s) 743, 1448, 1748, 2797
AlwI GGATC 2 cut(s) 2108, 2294
AlwNI CAGNNNCTG 1 cut(s) 3020
Ama87I CYCGRG 3 cut(s) 1871, 2519, 2897
Aor13HI TCCGGA 2 cut(s) 1726, 2947
AoxI GGCC 4 cut(s) 364, 1875, 2151, 2743
ApaLI GTGCAC 4 cut(s) 743, 1448, 1748, 2797
ApeKI GCWGC 8 cut(s) 293, 1900, 1951, 2304, 2680, 2727, 2981, 3107
ArsI GACNNNNNNTTYG 4 cut(s) 523, 555, 1681, 1713
AseI ATTAAT 1 cut(s) 2012
Asp700I GAANNNNTTC 1 cut(s) 1722
AspLEI GCGC 6 cut(s) 2824, 2878, 3061, 3107, 3112, 3114
AspS9I GGNCC 3 cut(s) 61, 1617, 2325
AsuHPI GGTGA 4 cut(s) 40, 2039, 2173, 2577
AvaI CYCGRG 3 cut(s) 1871, 2519, 2897
AvaII GGWCC 3 cut(s) 61, 1617, 2325
BaeGI GKGCMC 4 cut(s) 747, 1452, 1752, 2801
BaeI ACNNNNGTAYC 4 cut(s) 2209, 2242, 3009, 3042
BalI TGGCCA 1 cut(s) 366
BanI GGYRCC 1 cut(s) 845
BanII GRGCYC 2 cut(s) 660, 688
BbsI GAAGAC 2 cut(s) 2651, 2678
Bbv12I GWGCWC 8 cut(s) 147, 660, 747, 910, 1452, 1752, 2753, 2801
BbvI GCAGC 7 cut(s) 305, 1912, 1938, 2316, 2667, 2714, 2968
BccI CCATC 7 cut(s) 220, 625, 683, 686, 895, 2237, 2851
BceAI ACGGC 2 cut(s) 125, 833
BclI TGATCA 3 cut(s) 1212, 2482, 2694
BcoDI GTCTC 6 cut(s) 1088, 1229, 2064, 2419, 2421, 2722
BfaI CTAG 8 cut(s) 29, 722, 800, 894, 969, 1893, 1991, 2192
BfmI CTRYAG 2 cut(s) 132, 805
BfrI CTTAAG 1 cut(s) 2684
BfuAI ACCTGC 1 cut(s) 3106
BglII AGATCT 1 cut(s) 415
BmcAI AGTACT 1 cut(s) 2474
Bme18I GGWCC 3 cut(s) 61, 1617, 2325
BmeT110I CYCGRG 3 cut(s) 1871, 2519, 2897
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 3 cut(s) 61, 1617, 2325
BmiI GGNNCC 4 cut(s) 685, 797, 847, 1017
BmsI GCATC 7 cut(s) 142, 1912, 2122, 2560, 2898, 2970, 2992
BpiI GAAGAC 2 cut(s) 2651, 2678
BpuEI CTTGAG 2 cut(s) 1774, 2441
BsaHI GRCGYC 1 cut(s) 2675
BsaI GGTCTC 2 cut(s) 1088, 2421
BsaJI CCNNGG 3 cut(s) 1872, 1878, 2976
BsaWI WCCGGW 2 cut(s) 1726, 2947
BsaXI ACNNNNNCTCC 2 cut(s) 221, 251
Bsc4I CCNNNNNNNGG 5 cut(s) 58, 626, 2364, 2628, 2831
Bse1I ACTGG 1 cut(s) 2746
Bse3DI GCAATG 5 cut(s) 396, 1426, 1600, 2648, 2817
BseAI TCCGGA 2 cut(s) 1726, 2947
BseDI CCNNGG 3 cut(s) 1872, 1878, 2976
BseLI CCNNNNNNNGG 5 cut(s) 58, 626, 2364, 2628, 2831
BseMI GCAATG 5 cut(s) 396, 1426, 1600, 2648, 2817
BseMII CTCAG 3 cut(s) 254, 433, 2443
BseNI ACTGG 1 cut(s) 2746
BsePI GCGCGC 1 cut(s) 3110
BseRI GAGGAG 3 cut(s) 173, 1526, 2320
BseSI GKGCMC 4 cut(s) 747, 1452, 1752, 2801
BseXI GCAGC 7 cut(s) 305, 1912, 1938, 2316, 2667, 2714, 2968
Bsh1236I CGCG 5 cut(s) 393, 1657, 2978, 3112, 3114
BshFI GGCC 4 cut(s) 366, 1877, 2153, 2745
BshNI GGYRCC 1 cut(s) 845
BsiHKAI GWGCWC 8 cut(s) 147, 660, 747, 910, 1452, 1752, 2753, 2801
BsiHKCI CYCGRG 3 cut(s) 1871, 2519, 2897
BsiSI CCGG 3 cut(s) 1727, 2537, 2948
BslFI GGGAC 1 cut(s) 2694
BslI CCNNNNNNNGG 5 cut(s) 58, 626, 2364, 2628, 2831
BsmAI GTCTC 6 cut(s) 1088, 1229, 2064, 2419, 2421, 2722
BsmFI GGGAC 1 cut(s) 2694
BsmI GAATGC 1 cut(s) 339
BsnI GGCC 4 cut(s) 366, 1877, 2153, 2745
Bso31I GGTCTC 2 cut(s) 1088, 2421
BsoBI CYCGRG 3 cut(s) 1871, 2519, 2897
Bsp1286I GDGCHC 9 cut(s) 147, 660, 688, 747, 910, 1452, 1752, 2753, 2801
Bsp13I TCCGGA 2 cut(s) 1726, 2947
Bsp143I GATC 8 cut(s) 415, 526, 1212, 1379, 2100, 2286, 2482, 2694
Bsp19I CCATGG 1 cut(s) 1878
Bsp68I TCGCGA 1 cut(s) 393
BspACI CCGC 7 cut(s) 296, 1615, 1740, 2678, 2976, 2978, 3114
BspANI GGCC 4 cut(s) 366, 1877, 2153, 2745
BspCNI CTCAG 3 cut(s) 255, 432, 2442
BspEI TCCGGA 2 cut(s) 1726, 2947
BspFNI CGCG 5 cut(s) 393, 1657, 2978, 3112, 3114
BspHI TCATGA 1 cut(s) 2560
BspLI GGNNCC 4 cut(s) 685, 797, 847, 1017
BspMI ACCTGC 1 cut(s) 3106
BspPI GGATC 2 cut(s) 2108, 2294
BspQI GCTCTTC 2 cut(s) 2758, 2918
BspT107I GGYRCC 1 cut(s) 845
BspTI CTTAAG 1 cut(s) 2684
BspTNI GGTCTC 2 cut(s) 1088, 2421
BsrDI GCAATG 5 cut(s) 396, 1426, 1600, 2648, 2817
BsrI ACTGG 1 cut(s) 2746
BssECI CCNNGG 3 cut(s) 1872, 1878, 2976
BssHII GCGCGC 1 cut(s) 3110
BssMI GATC 8 cut(s) 415, 526, 1212, 1379, 2100, 2286, 2482, 2694
BssNI GRCGYC 1 cut(s) 2675
BssT1I CCWWGG 1 cut(s) 1878
Bst4CI ACNGT 3 cut(s) 1179, 2854, 3022
Bst6I CTCTTC 2 cut(s) 2758, 2918
BstACI GRCGYC 1 cut(s) 2675
BstAFI CTTAAG 1 cut(s) 2684
BstAPI GCANNNNNTGC 2 cut(s) 440, 1834
BstC8I GCNNGC 9 cut(s) 1898, 2209, 2815, 2959, 2986, 3063, 3067, 3103, 3112
BstDEI CTNAG 5 cut(s) 263, 419, 781, 1187, 2429
BstDSI CCRYGG 2 cut(s) 1878, 2976
BstFNI CGCG 5 cut(s) 393, 1657, 2978, 3112, 3114
BstHHI GCGC 6 cut(s) 2824, 2878, 3061, 3107, 3112, 3114
BstKTI GATC 8 cut(s) 418, 529, 1215, 1382, 2103, 2289, 2485, 2697
BstMAI GTCTC 6 cut(s) 1088, 1229, 2064, 2419, 2421, 2722
BstMBI GATC 8 cut(s) 415, 526, 1212, 1379, 2100, 2286, 2482, 2694
BstMWI GCNNNNNNNGC 9 cut(s) 137, 302, 440, 1834, 1951, 2819, 3071, 3107, 3111
BstNSI RCATGY 3 cut(s) 574, 1683, 2446
BstSFI CTRYAG 2 cut(s) 132, 805
BstSLI GKGCMC 4 cut(s) 747, 1452, 1752, 2801
BstUI CGCG 5 cut(s) 393, 1657, 2978, 3112, 3114
BstV1I GCAGC 7 cut(s) 305, 1912, 1938, 2316, 2667, 2714, 2968
BstV2I GAAGAC 2 cut(s) 2651, 2678
BstX2I RGATCY 1 cut(s) 415
BstXI CCANNNNNNTGG 1 cut(s) 226
BstYI RGATCY 1 cut(s) 415
BsuRI GGCC 4 cut(s) 366, 1877, 2153, 2745
BtgI CCRYGG 2 cut(s) 1878, 2976
BtgZI GCGATG 1 cut(s) 1982
BtrI CACGTC 1 cut(s) 235
BtsIMutI CAGTG 4 cut(s) 252, 427, 2753, 2850
BtuMI TCGCGA 1 cut(s) 393
BveI ACCTGC 1 cut(s) 3106
Cac8I GCNNGC 9 cut(s) 1898, 2209, 2815, 2959, 2986, 3063, 3067, 3103, 3112
CaiI CAGNNNCTG 1 cut(s) 3020
CciI TCATGA 1 cut(s) 2560
CfoI GCGC 6 cut(s) 2824, 2878, 3061, 3107, 3112, 3114
Cfr13I GGNCC 3 cut(s) 61, 1617, 2325
Cfr42I CCGCGG 1 cut(s) 2979
CseI GACGC 2 cut(s) 1996, 2683
Csp6I GTAC 3 cut(s) 472, 2226, 2473
CspCI CAANNNNNGTGG 2 cut(s) 502, 537
CviQI GTAC 3 cut(s) 472, 2226, 2473
DdeI CTNAG 5 cut(s) 263, 419, 781, 1187, 2429
DpnI GATC 8 cut(s) 417, 528, 1214, 1381, 2102, 2288, 2484, 2696
DpnII GATC 8 cut(s) 415, 526, 1212, 1379, 2100, 2286, 2482, 2694
DraI TTTAAA 1 cut(s) 207
EaeI YGGCCR 1 cut(s) 364
Eam1104I CTCTTC 2 cut(s) 2758, 2918
EarI CTCTTC 2 cut(s) 2758, 2918
Ecl136II GAGCTC 1 cut(s) 658
Eco130I CCWWGG 1 cut(s) 1878
Eco24I GRGCYC 2 cut(s) 660, 688
Eco31I GGTCTC 2 cut(s) 1088, 2421
Eco32I GATATC 1 cut(s) 1366
Eco47I GGWCC 3 cut(s) 61, 1617, 2325
Eco53kI GAGCTC 1 cut(s) 658
Eco57I CTGAAG 5 cut(s) 27, 1808, 1967, 2069, 2663
Eco88I CYCGRG 3 cut(s) 1871, 2519, 2897
EcoICRI GAGCTC 1 cut(s) 658
EcoRV GATATC 1 cut(s) 1366
EcoT14I CCWWGG 1 cut(s) 1878
EcoT22I ATGCAT 2 cut(s) 341, 1440
EcoT38I GRGCYC 2 cut(s) 660, 688
ErhI CCWWGG 1 cut(s) 1878
FalI AAGNNNNNCTT 2 cut(s) 1290, 1322
FaqI GGGAC 1 cut(s) 2694
FauI CCCGC 2 cut(s) 289, 1733
FbaI TGATCA 3 cut(s) 1212, 2482, 2694
FblI GTMKAC 1 cut(s) 1981
FriOI GRGCYC 2 cut(s) 660, 688
FspBI CTAG 8 cut(s) 29, 722, 800, 894, 969, 1893, 1991, 2192
FspI TGCGCA 1 cut(s) 3060
GlaI GCGC 6 cut(s) 2823, 2877, 3060, 3106, 3111, 3113
HaeIII GGCC 4 cut(s) 366, 1877, 2153, 2745
HapII CCGG 3 cut(s) 1727, 2537, 2948
HgaI GACGC 2 cut(s) 1996, 2683
HhaI GCGC 6 cut(s) 2824, 2878, 3061, 3107, 3112, 3114
Hin1I GRCGYC 1 cut(s) 2675
Hin6I GCGC 6 cut(s) 2822, 2876, 3059, 3105, 3110, 3112
HinP1I GCGC 6 cut(s) 2822, 2876, 3059, 3105, 3110, 3112
HincII GTYRAC 2 cut(s) 56, 1890
HindII GTYRAC 2 cut(s) 56, 1890
HindIII AAGCTT 1 cut(s) 726
HinfI GANTC 6 cut(s) 639, 1352, 2276, 2427, 3045, 3076
HpaII CCGG 3 cut(s) 1727, 2537, 2948
HphI GGTGA 4 cut(s) 40, 2039, 2173, 2577
Hpy166II GTNNAC 9 cut(s) 56, 474, 745, 1450, 1750, 1890, 1982, 2799, 3049
Hpy188I TCNGA 7 cut(s) 264, 737, 1782, 2291, 2432, 2511, 3039
Hpy8I GTNNAC 9 cut(s) 56, 474, 745, 1450, 1750, 1890, 1982, 2799, 3049
Hpy99I CGWCG 1 cut(s) 393
HpyCH4III ACNGT 3 cut(s) 1179, 2854, 3022
HpyCH4IV ACGT 3 cut(s) 234, 1609, 1691
HpyF10VI GCNNNNNNNGC 9 cut(s) 137, 302, 440, 1834, 1951, 2819, 3071, 3107, 3111
HpyF3I CTNAG 5 cut(s) 263, 419, 781, 1187, 2429
HpySE526I ACGT 3 cut(s) 234, 1609, 1691
Hsp92I GRCGYC 1 cut(s) 2675
HspAI GCGC 6 cut(s) 2822, 2876, 3059, 3105, 3110, 3112
Kpn2I TCCGGA 2 cut(s) 1726, 2947
Ksp22I TGATCA 3 cut(s) 1212, 2482, 2694
KspI CCGCGG 1 cut(s) 2979
Kzo9I GATC 8 cut(s) 415, 526, 1212, 1379, 2100, 2286, 2482, 2694
LguI GCTCTTC 2 cut(s) 2758, 2918
LmnI GCTCC 4 cut(s) 683, 905, 1159, 1548
Lsp1109I GCAGC 7 cut(s) 305, 1912, 1938, 2316, 2667, 2714, 2968
LweI GCATC 7 cut(s) 142, 1912, 2122, 2560, 2898, 2970, 2992
MaeI CTAG 8 cut(s) 29, 722, 800, 894, 969, 1893, 1991, 2192
MaeII ACGT 3 cut(s) 234, 1609, 1691
MaeIII GTNAC 9 cut(s) 868, 957, 1182, 1237, 1293, 1703, 2294, 2378, 2583
MalI GATC 8 cut(s) 417, 528, 1214, 1381, 2102, 2288, 2484, 2696
MboI GATC 8 cut(s) 415, 526, 1212, 1379, 2100, 2286, 2482, 2694
MfeI CAATTG 4 cut(s) 35, 438, 1962, 2320
MflI RGATCY 1 cut(s) 415
MhlI GDGCHC 9 cut(s) 147, 660, 688, 747, 910, 1452, 1752, 2753, 2801
MlsI TGGCCA 1 cut(s) 366
MluNI TGGCCA 1 cut(s) 366
MlyI GAGTC 2 cut(s) 2421, 3054
MmeI TCCRAC 5 cut(s) 88, 219, 243, 1198, 2443
Mox20I TGGCCA 1 cut(s) 366
Mph1103I ATGCAT 2 cut(s) 341, 1440
MroI TCCGGA 2 cut(s) 1726, 2947
MroXI GAANNNNTTC 1 cut(s) 1722
MscI TGGCCA 1 cut(s) 366
MslI CAYNNNNRTG 6 cut(s) 843, 1908, 2159, 2565, 2855, 3054
Msp20I TGGCCA 1 cut(s) 366
MspA1I CMGCKG 3 cut(s) 296, 2680, 2978
MspCI CTTAAG 1 cut(s) 2684
MspI CCGG 3 cut(s) 1727, 2537, 2948
MteI GCGCNGCGC 1 cut(s) 3108
MunI CAATTG 4 cut(s) 35, 438, 1962, 2320
Mva1269I GAATGC 1 cut(s) 339
MvnI CGCG 5 cut(s) 393, 1657, 2978, 3112, 3114
MwoI GCNNNNNNNGC 9 cut(s) 137, 302, 440, 1834, 1951, 2819, 3071, 3107, 3111
NcoI CCATGG 1 cut(s) 1878
NdeII GATC 8 cut(s) 415, 526, 1212, 1379, 2100, 2286, 2482, 2694
NlaIV GGNNCC 4 cut(s) 685, 797, 847, 1017
NmuCI GTSAC 5 cut(s) 868, 957, 1293, 1703, 2583
NruI TCGCGA 1 cut(s) 393
NsbI TGCGCA 1 cut(s) 3060
NsiI ATGCAT 2 cut(s) 341, 1440
NspI RCATGY 3 cut(s) 574, 1683, 2446
PacI TTAATTAA 1 cut(s) 2340
PaeR7I CTCGAG 1 cut(s) 2519
PagI TCATGA 1 cut(s) 2560
PauI GCGCGC 1 cut(s) 3110
PciSI GCTCTTC 2 cut(s) 2758, 2918
PctI GAATGC 1 cut(s) 339
PdmI GAANNNNTTC 1 cut(s) 1722
PfeI GAWTC 4 cut(s) 639, 1352, 2276, 3076
PflMI CCANNNNNTGG 1 cut(s) 2628
PleI GAGTC 2 cut(s) 2421, 3053
PpsI GAGTC 2 cut(s) 2421, 3053
PshBI ATTAAT 1 cut(s) 2012
Psp124BI GAGCTC 1 cut(s) 660
PspN4I GGNNCC 4 cut(s) 685, 797, 847, 1017
PspPI GGNCC 3 cut(s) 61, 1617, 2325
PspXI VCTCGAGB 1 cut(s) 2519
PstNI CAGNNNCTG 1 cut(s) 3020
PsuI RGATCY 1 cut(s) 415
PteI GCGCGC 1 cut(s) 3110
RruI TCGCGA 1 cut(s) 393
RsaI GTAC 3 cut(s) 473, 2227, 2474
RsaNI GTAC 3 cut(s) 472, 2226, 2473
RseI CAYNNNNRTG 6 cut(s) 843, 1908, 2159, 2565, 2855, 3054
SacI GAGCTC 1 cut(s) 660
SacII CCGCGG 1 cut(s) 2979
SapI GCTCTTC 2 cut(s) 2758, 2918
Sau3AI GATC 8 cut(s) 415, 526, 1212, 1379, 2100, 2286, 2482, 2694
Sau96I GGNCC 3 cut(s) 61, 1617, 2325
ScaI AGTACT 1 cut(s) 2474
SchI GAGTC 2 cut(s) 2421, 3054
SduI GDGCHC 9 cut(s) 147, 660, 688, 747, 910, 1452, 1752, 2753, 2801
SfaNI GCATC 7 cut(s) 142, 1912, 2122, 2560, 2898, 2970, 2992
SfcI CTRYAG 2 cut(s) 132, 805
Sfr274I CTCGAG 1 cut(s) 2519
Sfr303I CCGCGG 1 cut(s) 2979
SgrBI CCGCGG 1 cut(s) 2979
SinI GGWCC 3 cut(s) 61, 1617, 2325
SlaI CTCGAG 1 cut(s) 2519
SmiMI CAYNNNNRTG 6 cut(s) 843, 1908, 2159, 2565, 2855, 3054
SmlI CTYRAG 4 cut(s) 1753, 2420, 2519, 2684
SmoI CTYRAG 4 cut(s) 1753, 2420, 2519, 2684
SsiI CCGC 7 cut(s) 296, 1615, 1740, 2678, 2976, 2978, 3114
SspI AATATT 2 cut(s) 1466, 2244
SspMI CTAG 8 cut(s) 29, 722, 800, 894, 969, 1893, 1991, 2192
SstI GAGCTC 1 cut(s) 660
StyI CCWWGG 1 cut(s) 1878
TaaI ACNGT 3 cut(s) 1179, 2854, 3022
TaiI ACGT 3 cut(s) 237, 1612, 1694
TaqI TCGA 8 cut(s) 525, 642, 756, 1362, 1494, 1716, 2232, 2520
TatI WGTACW 2 cut(s) 471, 2472
TauI GCSGC 2 cut(s) 2680, 2981
TfiI GAWTC 4 cut(s) 639, 1352, 2276, 3076
TscAI CASTG 4 cut(s) 259, 427, 2753, 2857
TseFI GTSAC 5 cut(s) 868, 957, 1293, 1703, 2583
TseI GCWGC 8 cut(s) 293, 1900, 1951, 2304, 2680, 2727, 2981, 3107
Tsp45I GTSAC 5 cut(s) 868, 957, 1293, 1703, 2583
TspGWI ACGGA 2 cut(s) 1535, 1999
TspRI CASTG 4 cut(s) 259, 427, 2753, 2857
Van91I CCANNNNNTGG 1 cut(s) 2628
Vha464I CTTAAG 1 cut(s) 2684
VneI GTGCAC 4 cut(s) 743, 1448, 1748, 2797
VpaK11BI GGWCC 3 cut(s) 61, 1617, 2325
VspI ATTAAT 1 cut(s) 2012
XceI RCATGY 3 cut(s) 574, 1683, 2446
XhoI CTCGAG 1 cut(s) 2519
XmiI GTMKAC 1 cut(s) 1981
XmnI GAANNNNTTC 1 cut(s) 1722
XspI CTAG 8 cut(s) 29, 722, 800, 894, 969, 1893, 1991, 2192
ZrmI AGTACT 1 cut(s) 2474
Zsp2I ATGCAT 2 cut(s) 341, 1440
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.