RLG00000001537

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
17191911 .. 17195151
3241 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000001537

Sequence Viewer

Length: 2940 bp
ATGGCCGAGGCACTCGTCAACCTGCTTCTGGAAGAATTATTTACAGTTGCTTTTGACCACACAAAAGAAGCTGTGACACTGGTTTTGACTGCTAAGACAGAGGTGGAAAAATTCAGCAGCAATCTCAAAGCAATTCAAGCTGTGCTCGAGGATGCTGAGAAGCAGCAAGTGGAGAAGGCCAGCGTGAGGATCTGGTTGGATCGGCTGAATGATGTCTCTTACGAGATGGTTGACGTGCTAGATGAGTGGAACACTGAAATTCTGAAACGAAAGGCAAAGGGAGTTGCTACTGAGAAAAAGAAAACCTTCAAGAAGGTATGTTTCTCCATTCCCTCGGATTGCTTTTGTTTTGGCCCAGTCAATAAGGCAAGTCATCTTTATAAAATAGCAACTGAGATAAAAGAGTTGAATGAAAAGTTGACTTCGATTGCTGCTCAGAAAAAAGATTTTCAGTTTCATGAATCCTCAATTAGAATTGCTGAACAACTTAATCAACCGCTGAAAACTTCATCAATTGTCGATATTTCTACAATATTTGGTAGAAAAGAAGCAACAGATGATTTGTTAAGCAAGTTGTTGAGTGATGGTAGTGAAGAAGGGAAAAGGGTCCTTGTCATCCCTATAGTGGGTATGGGAGGGATGGGCAAGACAACTCTTGCTCAGTTAGCCTACAACAATGAAAATGTAAAAACCTATCTTGAGAATAGAATATGGGTTTGTGTCTCAGATCCTTTTGATGAGGTGAAGATTGCCAAAGCCATTATTAGTGGTACTGGTCAGGAAGCCCCAAATTCAACTGAGTTAGAAGATGTCTTGCAGTGTATGTCTAAATCTCTTGAGGCGAAGAAGTTCCTCATTGTCTTAGATGATGTGTGGACTGAAGATGAAACAAAGTGGGACAATTTAAAGTTACCAGTGATAATGCAAAGTTGTGCAAAAGGTAGTAGAATATTGGTGACCACGCGAAAGAAGGGGGTTGCTGAAATGATGAAAGCAGACGCTCACATGATCCAAATAGAGAAGTTGAGTGATAAAACCTGTTTTGAACTGTTCAGCAGCATTGCATTTTTGAATAGGGAAGAAGATAAGGCTAATGGATTTGGAGTTATAGGTGAGAAAATTGTAGAAAAGTGTGACGGCTTGCCACTTGCTATCAAATGTTTAGGTAAACTCATGCACAAAAAAAAAACAATAGGAGAGTGGCAAAATGTTTTGGATAGTAAGATATGGGATCTAAGAGCGGTTAAGCAAGAAGTTTTTCGACCACTTCTACTAAGTTATTGTGAGTTGGCCCCTATAGTTAAGCGATGTCTTTTATACTGTGCTACATTTCCAAAAGATTATCGGTTTAACAAACACAATTTGATTGAGTTGTGGATGTCACAAGATTATCTTAGTGGGAAGGAATATAAAGAAAAGGAAGAAATGGGTGAATATGTTTTTGATACCTTAGTGATGCAATCATTTTTCCAGGATGTTGAGGAAGCCGTTGATTTTTGGGATAAGAGCATTACTATATTCTGCAAAATGCATGATATTGTGCATGACTTTATGCAGTTCCTCAATAAGAATGAATGCTTTACAATGGAGGCTAAAGAAGCAAACACAAGAGTGATGGTAATAAGTGAGGAGGTCCGTCATTTGAGCTTAATGTATGCACCCTATAGTTCTCCACTTCTGGATTTTATTCCCCCAGTGAATTGCAAAAAGTTGCGTACTCTAGCAACTTTTGATTCAAGAATGAGTAGCATAGATATAAAAGCAATTTCACAACTGAAATGTCTGAGGACGTTAAATTTGAGCTACAACGGCATTGAAGAACTTCCAGAAGAGATTTGTGAATTGATACACTTGAGGTATCTTGACTCGTCTAAAAATCGTAGGTTGAAGAAACTACCAGACAGTTTGGGCAATTTATACAATTTGCAAACTTTGTGTCTTAATGGCTGCGTGGGTCTTGAAAAACTGCCTGAAAGCATGGGGAAATTGATTAATCTAAGACATCTTCATACCAACCGTTGTGATGAGCTGCGGTATTTGCCGAGAGGTATCGGGAGATTAACAAGCCTGCAAACGCTAAACACGTGTCCTGTTAATCATGATAGTGAAGGCTTGAAATTAGGAGATCTGGGAAGCTTGGACCAGCTTCAGGGTACTCTCTTCATTCAGATCAAGGGGAATCTAGAGGATACGAGTGAGGCGCAGAAGGCTCGCTTGTGGAATAAAAAGCTTTGTACTCTGGTGCTATGGTTTCCAACTTTGGACAAGCAGAGTCATGTACAAGTCCTGGAGGCGTTACGGCCGCATCAAGCTGTGGAAAATTTAGCGATTCTTGGGTATGGTGGCACCACCGCGCCCAGTTGGATGATATCCTTACAGAATTTGAGAATCCTTTCTCTTGCTGCTTGGGATGGATGTGAATTTTTGCCTCCTCTTGGGAAATTGCCGCTCCTTGAAGAACTAGAAGTAGAAGAAATGGAGAAAGTGAAGACGGTTGGAGATGAATTCTTGGGAATAACGGGCACTCAAACATCCTCTGTTTTATTCCCAAAATTGAAAAAACTCAGTTTCGAGGAAATGGGTGAGTGGGAACAGTGGGAAGGAGTTGGAGGGCGGACAGAAAGCAGTGGTGCGCAAATTTCAATTATGCCATGCCTTGTCGAGTTCACAGTTGACAACTGCCCTAAGCTGATGAACCTGCCACTCTTCCTACAAAACACGCCGGTCAGAAAAATTCGCATCACTAGATGTCGTCGGAGTATTATAACACCTGTCTGGCCCGACAACTGTTCTGTCGACATTCGTCGACCGCTCGACGATCCAGAAACACCAAATAGTACTGAGAGCAGAGTTGAAACAGAAATACTGATAGACTCACAAAGAGATGAGGAGATCACCATGTCACCTGTTGAAACAGAGATACAGATACTTACAGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

980

Amino Acids

111.24

Weight (kDa)

5.48

Isoelectric Point (pI)

44.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 98 7.2e-19 Rx N-terminal domain
NB-ARC PF00931 185 - 359 9.8e-34 NB-ARC domain
WHD_DRP PF23559 444 - 517 5.5e-19 Disease resistance protein Winged helix domain
LRR_14 PF23598 566 - 625 4.1e-06 Leucine-rich repeat region
LRR_14 PF23598 570 - 858 1.1e-30 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 707 - 826 1.7e-25 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 381, 2765
Acc16I TGCGCA 1 cut(s) 2634
Acc36I ACCTGC 2 cut(s) 30, 2706
AccB1I GGYRCC 1 cut(s) 2345
AccBSI CCGCTC 3 cut(s) 1241, 2449, 2812
AccI GTMKAC 2 cut(s) 2796, 2806
AccII CGCG 2 cut(s) 964, 2354
AciI CCGC 8 cut(s) 497, 1241, 2032, 2303, 2352, 2447, 2614, 2810
AclWI GGATC 6 cut(s) 197, 207, 722, 1003, 1239, 2813
AcoI YGGCCR 2 cut(s) 3, 2300
AcuI CTGAAG 2 cut(s) 900, 2132
AcvI CACGTG 1 cut(s) 2085
AfaI GTAC 6 cut(s) 772, 1717, 2155, 2236, 2280, 2839
AfiI CCNNNNNNNGG 6 cut(s) 28, 186, 625, 626, 2149, 2435
AflIII ACRYGT 2 cut(s) 2082, 2084
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 2 cut(s) 1470, 2286
AleI CACNNNNGTG 1 cut(s) 1610
Alw21I GWGCWC 1 cut(s) 147
Alw26I GTCTC 2 cut(s) 220, 727
AlwI GGATC 6 cut(s) 197, 207, 722, 1003, 1239, 2813
Ama87I CYCGRG 1 cut(s) 146
AoxI GGCC 6 cut(s) 3, 177, 352, 1290, 2300, 2777
ApeKI GCWGC 7 cut(s) 117, 163, 431, 1056, 1947, 2029, 2402
ArsI GACNNNNNNTTYG 6 cut(s) 67, 99, 1780, 1812, 1921, 1953
AseI ATTAAT 1 cut(s) 1992
Asp700I GAANNNNTTC 5 cut(s) 305, 848, 1257, 1821, 2392
AspLEI GCGC 3 cut(s) 2203, 2356, 2635
AspS9I GGNCC 6 cut(s) 353, 607, 1291, 1633, 2140, 2778
AsuHPI GGTGA 7 cut(s) 754, 967, 1124, 1442, 2594, 2887, 2895
AvaI CYCGRG 1 cut(s) 146
AvaII GGWCC 3 cut(s) 607, 1633, 2140
BaeGI GKGCMC 1 cut(s) 2525
BaeI ACNNNNGTAYC 2 cut(s) 1437, 1470
BanI GGYRCC 1 cut(s) 2345
BbrPI CACGTG 1 cut(s) 2085
BbsI GAAGAC 1 cut(s) 2495
Bbv12I GWGCWC 1 cut(s) 147
BbvI GCAGC 7 cut(s) 129, 175, 418, 1068, 1934, 2016, 2389
BccI CCATC 5 cut(s) 220, 578, 634, 1609, 2405
BceAI ACGGC 4 cut(s) 1153, 1472, 1825, 2315
BcgI CGANNNNNNTGC 2 cut(s) 2192, 2226
BciT130I CCWGG 2 cut(s) 1472, 2288
BciVI GTATCC 1 cut(s) 2182
BcoDI GTCTC 2 cut(s) 220, 727
BfaI CTAG 5 cut(s) 239, 1721, 2183, 2462, 2745
BfmI CTRYAG 3 cut(s) 621, 1296, 1663
BfuAI ACCTGC 2 cut(s) 30, 2706
BfuI GTATCC 1 cut(s) 2182
BglII AGATCT 1 cut(s) 2125
BisI GCNGC 9 cut(s) 118, 164, 432, 1057, 1948, 2030, 2303, 2403, 2447
BlsI GCNGC 9 cut(s) 119, 165, 433, 1058, 1949, 2031, 2304, 2404, 2448
BmcAI AGTACT 1 cut(s) 2839
Bme1390I CCNGG 2 cut(s) 1472, 2288
Bme18I GGWCC 3 cut(s) 607, 1633, 2140
BmeT110I CYCGRG 1 cut(s) 146
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 6 cut(s) 353, 607, 1291, 1633, 2140, 2778
BmiI GGNNCC 3 cut(s) 608, 1293, 2347
BmrFI CCNGG 2 cut(s) 1472, 2288
BmrI ACTGGG 3 cut(s) 350, 1688, 2352
BmsI GCATC 4 cut(s) 142, 1446, 2314, 2748
BmuI ACTGGG 3 cut(s) 350, 1688, 2352
BoxI GACNNNNGTC 1 cut(s) 2802
BpiI GAAGAC 1 cut(s) 2495
BpmI CTGGAG 1 cut(s) 2309
Bpu10I CCTNAGC 1 cut(s) 2685
BpuEI CTTGAG 3 cut(s) 719, 857, 1873
BsaAI YACGTR 1 cut(s) 2085
BsaJI CCNNGG 2 cut(s) 6, 333
Bsc4I CCNNNNNNNGG 6 cut(s) 28, 186, 625, 626, 2149, 2435
Bse118I RCCGGY 1 cut(s) 2722
Bse1I ACTGG 6 cut(s) 84, 356, 778, 914, 1694, 2358
Bse3DI GCAATG 1 cut(s) 1059
BseBI CCWGG 2 cut(s) 1472, 2288
BseDI CCNNGG 2 cut(s) 6, 333
BseGI GGATG 9 cut(s) 157, 615, 645, 1383, 1480, 2370, 2416, 2420, 2531
BseLI CCNNNNNNNGG 6 cut(s) 28, 186, 625, 626, 2149, 2435
BseMI GCAATG 1 cut(s) 1059
BseNI ACTGG 6 cut(s) 84, 356, 778, 914, 1694, 2358
BseRI GAGGAG 3 cut(s) 1643, 2421, 2903
BseSI GKGCMC 1 cut(s) 2525
BseX3I CGGCCG 1 cut(s) 2300
BseXI GCAGC 7 cut(s) 129, 175, 418, 1068, 1934, 2016, 2389
Bsh1236I CGCG 2 cut(s) 964, 2354
Bsh1285I CGRYCG 2 cut(s) 2303, 2810
BshFI GGCC 6 cut(s) 5, 179, 354, 1292, 2302, 2779
BshNI GGYRCC 1 cut(s) 2345
BsiEI CGRYCG 2 cut(s) 2303, 2810
BsiHKAI GWGCWC 1 cut(s) 147
BsiHKCI CYCGRG 1 cut(s) 146
BsiSI CCGG 1 cut(s) 2723
BslFI GGGAC 1 cut(s) 911
BslI CCNNNNNNNGG 6 cut(s) 28, 186, 625, 626, 2149, 2435
BsmAI GTCTC 2 cut(s) 220, 727
BsmFI GGGAC 1 cut(s) 911
BsmI GAATGC 1 cut(s) 1580
BsnI GGCC 6 cut(s) 5, 179, 354, 1292, 2302, 2779
BsoBI CYCGRG 1 cut(s) 146
Bsp1286I GDGCHC 2 cut(s) 147, 2525
Bsp1407I TGTACA 1 cut(s) 2278
Bsp143I GATC 9 cut(s) 189, 199, 727, 1008, 1231, 2125, 2169, 2818, 2892
BspACI CCGC 8 cut(s) 497, 1241, 2032, 2303, 2352, 2447, 2614, 2810
BspANI GGCC 6 cut(s) 5, 179, 354, 1292, 2302, 2779
BspFNI CGCG 2 cut(s) 964, 2354
BspHI TCATGA 2 cut(s) 457, 2098
BspLI GGNNCC 3 cut(s) 608, 1293, 2347
BspMI ACCTGC 2 cut(s) 30, 2706
BspPI GGATC 6 cut(s) 197, 207, 722, 1003, 1239, 2813
BspT107I GGYRCC 1 cut(s) 2345
BsrBI CCGCTC 3 cut(s) 1241, 2449, 2812
BsrDI GCAATG 1 cut(s) 1059
BsrFI RCCGGY 1 cut(s) 2722
BsrGI TGTACA 1 cut(s) 2278
BsrI ACTGG 6 cut(s) 84, 356, 778, 914, 1694, 2358
BssAI RCCGGY 1 cut(s) 2722
BssECI CCNNGG 2 cut(s) 6, 333
BssMI GATC 9 cut(s) 189, 199, 727, 1008, 1231, 2125, 2169, 2818, 2892
Bst2UI CCWGG 2 cut(s) 1472, 2288
Bst4CI ACNGT 9 cut(s) 46, 1050, 1322, 1904, 2018, 2494, 2595, 2671, 2789
Bst6I CTCTTC 3 cut(s) 1824, 2165, 2711
BstAUI TGTACA 1 cut(s) 2278
BstBAI YACGTR 1 cut(s) 2085
BstC8I GCNNGC 4 cut(s) 181, 1142, 2069, 2212
BstEII GGTNACC 1 cut(s) 955
BstF5I GGATG 9 cut(s) 157, 615, 645, 1383, 1480, 2370, 2416, 2420, 2531
BstFNI CGCG 2 cut(s) 964, 2354
BstHHI GCGC 3 cut(s) 2203, 2356, 2635
BstKTI GATC 9 cut(s) 192, 202, 730, 1011, 1234, 2128, 2172, 2821, 2895
BstMAI GTCTC 2 cut(s) 220, 727
BstMBI GATC 9 cut(s) 189, 199, 727, 1008, 1231, 2125, 2169, 2818, 2892
BstMCI CGRYCG 2 cut(s) 2303, 2810
BstMWI GCNNNNNNNGC 6 cut(s) 137, 665, 1598, 1809, 2038, 2207
BstNI CCWGG 2 cut(s) 1472, 2288
BstPAI GACNNNNGTC 1 cut(s) 2802
BstPI GGTNACC 1 cut(s) 955
BstSCI CCNGG 2 cut(s) 1470, 2286
BstSFI CTRYAG 3 cut(s) 621, 1296, 1663
BstSLI GKGCMC 1 cut(s) 2525
BstUI CGCG 2 cut(s) 964, 2354
BstV1I GCAGC 7 cut(s) 129, 175, 418, 1068, 1934, 2016, 2389
BstV2I GAAGAC 1 cut(s) 2495
BstX2I RGATCY 4 cut(s) 189, 727, 1231, 2125
BstYI RGATCY 4 cut(s) 189, 727, 1231, 2125
BstZI CGGCCG 1 cut(s) 2300
BsuI GTATCC 1 cut(s) 2182
BsuRI GGCC 6 cut(s) 5, 179, 354, 1292, 2302, 2779
BtgZI GCGATG 1 cut(s) 1321
BtrI CACGTC 1 cut(s) 235
BtsCI GGATG 9 cut(s) 157, 615, 645, 1383, 1480, 2370, 2416, 2420, 2531
BtsI GCAGTG 2 cut(s) 824, 2632
BtsIMutI CAGTG 7 cut(s) 77, 252, 824, 921, 1701, 2600, 2632
BveI ACCTGC 2 cut(s) 30, 2706
Cac8I GCNNGC 4 cut(s) 181, 1142, 2069, 2212
CciI TCATGA 2 cut(s) 457, 2098
CfoI GCGC 3 cut(s) 2203, 2356, 2635
Cfr10I RCCGGY 1 cut(s) 2722
Cfr13I GGNCC 6 cut(s) 353, 607, 1291, 1633, 2140, 2778
CseI GACGC 1 cut(s) 1007
Csp6I GTAC 6 cut(s) 771, 1716, 2154, 2235, 2279, 2838
CviQI GTAC 6 cut(s) 771, 1716, 2154, 2235, 2279, 2838
DpnI GATC 9 cut(s) 191, 201, 729, 1010, 1233, 2127, 2171, 2820, 2894
DpnII GATC 9 cut(s) 189, 199, 727, 1008, 1231, 2125, 2169, 2818, 2892
DraI TTTAAA 1 cut(s) 906
EaeI YGGCCR 2 cut(s) 3, 2300
EagI CGGCCG 1 cut(s) 2300
Eam1104I CTCTTC 3 cut(s) 1824, 2165, 2711
EarI CTCTTC 3 cut(s) 1824, 2165, 2711
EciI GGCGGA 1 cut(s) 2629
EclXI CGGCCG 1 cut(s) 2300
Eco32I GATATC 1 cut(s) 2370
Eco47I GGWCC 3 cut(s) 607, 1633, 2140
Eco52I CGGCCG 1 cut(s) 2300
Eco57I CTGAAG 2 cut(s) 900, 2132
Eco72I CACGTG 1 cut(s) 2085
Eco88I CYCGRG 1 cut(s) 146
Eco91I GGTNACC 1 cut(s) 955
EcoO109I RGGNCCY 1 cut(s) 607
EcoO65I GGTNACC 1 cut(s) 955
EcoRI GAATTC 1 cut(s) 2504
EcoRII CCWGG 2 cut(s) 1470, 2286
EcoRV GATATC 1 cut(s) 2370
EcoT22I ATGCAT 1 cut(s) 1533
FalI AAGNNNNNCTT 6 cut(s) 290, 322, 1377, 1409, 2198, 2230
FaqI GGGAC 1 cut(s) 911
FblI GTMKAC 2 cut(s) 2796, 2806
Fnu4HI GCNGC 9 cut(s) 118, 164, 432, 1057, 1948, 2030, 2303, 2403, 2447
FokI GGATG 9 cut(s) 164, 602, 652, 1390, 1487, 2377, 2423, 2427, 2518
Fsp4HI GCNGC 9 cut(s) 118, 164, 432, 1057, 1948, 2030, 2303, 2403, 2447
FspBI CTAG 5 cut(s) 239, 1721, 2183, 2462, 2745
FspI TGCGCA 1 cut(s) 2634
GlaI GCGC 3 cut(s) 2202, 2355, 2634
GluI GCNGC 9 cut(s) 118, 164, 432, 1057, 1948, 2030, 2303, 2403, 2447
GsuI CTGGAG 1 cut(s) 2309
HaeIII GGCC 6 cut(s) 5, 179, 354, 1292, 2302, 2779
HapII CCGG 1 cut(s) 2723
HgaI GACGC 1 cut(s) 1007
HhaI GCGC 3 cut(s) 2203, 2356, 2635
Hin6I GCGC 3 cut(s) 2201, 2354, 2633
HinP1I GCGC 3 cut(s) 2201, 2354, 2633
HincII GTYRAC 6 cut(s) 19, 232, 420, 2674, 2797, 2807
HindII GTYRAC 6 cut(s) 19, 232, 420, 2674, 2797, 2807
HindIII AAGCTT 2 cut(s) 2134, 2228
HinfI GANTC 8 cut(s) 461, 1733, 1865, 2179, 2272, 2329, 2388, 2873
HpaII CCGG 1 cut(s) 2723
HphI GGTGA 7 cut(s) 754, 967, 1124, 1442, 2594, 2887, 2895
Hpy166II GTNNAC 9 cut(s) 19, 232, 420, 876, 1169, 2667, 2674, 2797, 2807
Hpy188I TCNGA 8 cut(s) 264, 337, 438, 727, 1785, 2169, 2729, 2757
Hpy8I GTNNAC 9 cut(s) 19, 232, 420, 876, 1169, 2667, 2674, 2797, 2807
Hpy99I CGWCG 3 cut(s) 2757, 2808, 2819
HpyAV CCTTC 9 cut(s) 169, 307, 316, 590, 964, 1396, 2102, 2200, 2594
HpyCH4III ACNGT 9 cut(s) 46, 1050, 1322, 1904, 2018, 2494, 2595, 2671, 2789
HpyCH4IV ACGT 3 cut(s) 234, 1790, 2084
HpyF10VI GCNNNNNNNGC 6 cut(s) 137, 665, 1598, 1809, 2038, 2207
HpySE526I ACGT 3 cut(s) 234, 1790, 2084
HspAI GCGC 3 cut(s) 2201, 2354, 2633
Kzo9I GATC 9 cut(s) 189, 199, 727, 1008, 1231, 2125, 2169, 2818, 2892
LmnI GCTCC 1 cut(s) 2454
Lsp1109I GCAGC 7 cut(s) 129, 175, 418, 1068, 1934, 2016, 2389
LweI GCATC 4 cut(s) 142, 1446, 2314, 2748
MaeI CTAG 5 cut(s) 239, 1721, 2183, 2462, 2745
MaeII ACGT 3 cut(s) 234, 1790, 2084
MaeIII GTNAC 7 cut(s) 73, 909, 955, 1133, 1380, 2295, 2901
MalI GATC 9 cut(s) 191, 201, 729, 1010, 1233, 2127, 2171, 2820, 2894
MbiI CCGCTC 3 cut(s) 1241, 2449, 2812
MboI GATC 9 cut(s) 189, 199, 727, 1008, 1231, 2125, 2169, 2818, 2892
MfeI CAATTG 1 cut(s) 513
MflI RGATCY 4 cut(s) 189, 727, 1231, 2125
MhlI GDGCHC 2 cut(s) 147, 2525
MlyI GAGTC 3 cut(s) 1859, 2281, 2867
MmeI TCCRAC 6 cut(s) 177, 2279, 2342, 2476, 2587, 2735
Mph1103I ATGCAT 1 cut(s) 1533
MroXI GAANNNNTTC 5 cut(s) 305, 848, 1257, 1821, 2392
MslI CAYNNNNRTG 2 cut(s) 1610, 2103
MspA1I CMGCKG 1 cut(s) 499
MspI CCGG 1 cut(s) 2723
MspR9I CCNGG 2 cut(s) 1472, 2288
MunI CAATTG 1 cut(s) 513
Mva1269I GAATGC 1 cut(s) 1580
MvaI CCWGG 2 cut(s) 1472, 2288
MvnI CGCG 2 cut(s) 964, 2354
MwoI GCNNNNNNNGC 6 cut(s) 137, 665, 1598, 1809, 2038, 2207
NdeII GATC 9 cut(s) 189, 199, 727, 1008, 1231, 2125, 2169, 2818, 2892
NlaIV GGNNCC 3 cut(s) 608, 1293, 2347
NmeAIII GCCGAG 2 cut(s) 31, 2067
NmuCI GTSAC 5 cut(s) 73, 955, 1133, 1380, 2901
NsbI TGCGCA 1 cut(s) 2634
NsiI ATGCAT 1 cut(s) 1533
OliI CACNNNNGTG 1 cut(s) 1610
PaeR7I CTCGAG 1 cut(s) 146
PagI TCATGA 2 cut(s) 457, 2098
PcsI WCGNNNNNNNCGW 1 cut(s) 2081
PctI GAATGC 1 cut(s) 1580
PdmI GAANNNNTTC 5 cut(s) 305, 848, 1257, 1821, 2392
PfeI GAWTC 5 cut(s) 461, 1733, 2179, 2329, 2388
PfoI TCCNGGA 2 cut(s) 1470, 2286
PkrI GCNGC 9 cut(s) 119, 165, 433, 1058, 1949, 2031, 2304, 2404, 2448
PleI GAGTC 3 cut(s) 1859, 2280, 2867
PmaCI CACGTG 1 cut(s) 2085
PmlI CACGTG 1 cut(s) 2085
PpsI GAGTC 3 cut(s) 1859, 2280, 2867
Ppu21I YACGTR 1 cut(s) 2085
PpuMI RGGWCCY 1 cut(s) 607
PshAI GACNNNNGTC 1 cut(s) 2802
PshBI ATTAAT 1 cut(s) 1992
PsiI TTATAA 2 cut(s) 381, 2765
Psp5II RGGWCCY 1 cut(s) 607
Psp6I CCWGG 2 cut(s) 1470, 2286
PspCI CACGTG 1 cut(s) 2085
PspEI GGTNACC 1 cut(s) 955
PspGI CCWGG 2 cut(s) 1470, 2286
PspN4I GGNNCC 3 cut(s) 608, 1293, 2347
PspPI GGNCC 6 cut(s) 353, 607, 1291, 1633, 2140, 2778
PspPPI RGGWCCY 1 cut(s) 607
PspXI VCTCGAGB 1 cut(s) 146
PsuI RGATCY 4 cut(s) 189, 727, 1231, 2125
RsaI GTAC 6 cut(s) 772, 1717, 2155, 2236, 2280, 2839
RsaNI GTAC 6 cut(s) 771, 1716, 2154, 2235, 2279, 2838
RseI CAYNNNNRTG 2 cut(s) 1610, 2103
SalI GTCGAC 2 cut(s) 2795, 2805
SatI GCNGC 9 cut(s) 118, 164, 432, 1057, 1948, 2030, 2303, 2403, 2447
Sau3AI GATC 9 cut(s) 189, 199, 727, 1008, 1231, 2125, 2169, 2818, 2892
Sau96I GGNCC 6 cut(s) 353, 607, 1291, 1633, 2140, 2778
ScaI AGTACT 1 cut(s) 2839
SchI GAGTC 3 cut(s) 1859, 2281, 2867
ScrFI CCNGG 2 cut(s) 1472, 2288
SduI GDGCHC 2 cut(s) 147, 2525
SfaNI GCATC 4 cut(s) 142, 1446, 2314, 2748
SfcI CTRYAG 3 cut(s) 621, 1296, 1663
Sfr274I CTCGAG 1 cut(s) 146
SinI GGWCC 3 cut(s) 607, 1633, 2140
SlaI CTCGAG 1 cut(s) 146
SmiMI CAYNNNNRTG 2 cut(s) 1610, 2103
SmlI CTYRAG 4 cut(s) 146, 698, 836, 1852
SmoI CTYRAG 4 cut(s) 146, 698, 836, 1852
SsiI CCGC 8 cut(s) 497, 1241, 2032, 2303, 2352, 2447, 2614, 2810
SspI AATATT 2 cut(s) 534, 951
SspMI CTAG 5 cut(s) 239, 1721, 2183, 2462, 2745
StyD4I CCNGG 2 cut(s) 1470, 2286
TaaI ACNGT 9 cut(s) 46, 1050, 1322, 1904, 2018, 2494, 2595, 2671, 2789
TaiI ACGT 3 cut(s) 237, 1793, 2087
TaqI TCGA 9 cut(s) 147, 425, 519, 1261, 2571, 2661, 2796, 2806, 2814
TatI WGTACW 3 cut(s) 2234, 2278, 2837
TauI GCSGC 2 cut(s) 2305, 2449
TfiI GAWTC 5 cut(s) 461, 1733, 2179, 2329, 2388
TscAI CASTG 7 cut(s) 84, 259, 824, 921, 1701, 2600, 2632
TseFI GTSAC 5 cut(s) 73, 955, 1133, 1380, 2901
TseI GCWGC 7 cut(s) 117, 163, 431, 1056, 1947, 2029, 2402
Tsp45I GTSAC 5 cut(s) 73, 955, 1133, 1380, 2901
TspGWI ACGGA 1 cut(s) 1625
TspRI CASTG 7 cut(s) 84, 259, 824, 921, 1701, 2600, 2632
VpaK11BI GGWCC 3 cut(s) 607, 1633, 2140
VspI ATTAAT 1 cut(s) 1992
XbaI TCTAGA 1 cut(s) 2182
XhoI CTCGAG 1 cut(s) 146
XmiI GTMKAC 2 cut(s) 2796, 2806
XmnI GAANNNNTTC 5 cut(s) 305, 848, 1257, 1821, 2392
XspI CTAG 5 cut(s) 239, 1721, 2183, 2462, 2745
ZrmI AGTACT 1 cut(s) 2839
Zsp2I ATGCAT 1 cut(s) 1533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.