disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 5 - 96 | 5.7e-22 | Rx N-terminal domain |
| NB-ARC | PF00931 | 182 - 357 | 6.3e-35 | NB-ARC domain |
| WHD_DRP | PF23559 | 443 - 514 | 6.3e-25 | Disease resistance protein Winged helix domain |
| LRR_8 | PF13855 | 558 - 598 | 3.3e-06 | Leucine rich repeat |
| LRR_14 | PF23598 | 559 - 643 | 1.3e-10 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 568 - 867 | 4.4e-27 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 704 - 830 | 1.1e-23 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2013 |
| AatII | GACGTC | 1 cut(s) | 237 |
| AccB1I | GGYRCC | 2 cut(s) | 2363, 2694 |
| AccII | CGCG | 2 cut(s) | 23, 964 |
| AciI | CCGC | 6 cut(s) | 21, 71, 330, 1204, 1459, 2746 |
| AclWI | GGATC | 3 cut(s) | 722, 1003, 2393 |
| AcoI | YGGCCR | 3 cut(s) | 349, 497, 538 |
| AcuI | CTGAAG | 3 cut(s) | 27, 1931, 2123 |
| AcyI | GRCGYC | 1 cut(s) | 234 |
| AfaI | GTAC | 4 cut(s) | 221, 946, 1705, 2024 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 598, 626, 2140, 2205, 2456 |
| AflIII | ACRYGT | 1 cut(s) | 832 |
| AgeI | ACCGGT | 1 cut(s) | 913 |
| AhlI | ACTAGT | 1 cut(s) | 998 |
| AjiI | CACGTC | 1 cut(s) | 2763 |
| AjnI | CCWGG | 3 cut(s) | 179, 591, 2244 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1242, 1274 |
| AluBI | AGCT | 8 cut(s) | 140, 205, 487, 1372, 1609, 2017, 2137, 2704 |
| AluI | AGCT | 8 cut(s) | 140, 205, 487, 1372, 1609, 2017, 2137, 2704 |
| Alw21I | GWGCWC | 3 cut(s) | 1545, 1940, 2220 |
| Alw26I | GTCTC | 5 cut(s) | 183, 727, 1863, 2379, 2563 |
| Alw44I | GTGCAC | 1 cut(s) | 1541 |
| AlwI | GGATC | 3 cut(s) | 722, 1003, 2393 |
| AoxI | GGCC | 5 cut(s) | 177, 349, 497, 538, 780 |
| ApaI | GGGCCC | 1 cut(s) | 784 |
| ApaLI | GTGCAC | 1 cut(s) | 1541 |
| ApeKI | GCWGC | 3 cut(s) | 117, 428, 484 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 67, 99, 1753, 1768, 1785, 1800 |
| AsiGI | ACCGGT | 1 cut(s) | 913 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 102, 1833 |
| AspLEI | GCGC | 1 cut(s) | 25 |
| AspS9I | GGNCC | 5 cut(s) | 780, 781, 1658, 1924, 2131 |
| AsuHPI | GGTGA | 8 cut(s) | 85, 196, 296, 967, 1124, 1628, 2303, 2506 |
| AvaII | GGWCC | 3 cut(s) | 1658, 1924, 2131 |
| BaeGI | GKGCMC | 3 cut(s) | 784, 1545, 2699 |
| BalI | TGGCCA | 1 cut(s) | 351 |
| BanI | GGYRCC | 2 cut(s) | 2363, 2694 |
| BanII | GRGCYC | 1 cut(s) | 784 |
| Bbv12I | GWGCWC | 3 cut(s) | 1545, 1940, 2220 |
| BbvCI | CCTCAGC | 2 cut(s) | 93, 2018 |
| BbvI | GCAGC | 3 cut(s) | 129, 415, 496 |
| BceAI | ACGGC | 1 cut(s) | 512 |
| BciT130I | CCWGG | 3 cut(s) | 181, 593, 2246 |
| BcoDI | GTCTC | 5 cut(s) | 183, 727, 1863, 2379, 2563 |
| BcuI | ACTAGT | 1 cut(s) | 998 |
| BfaI | CTAG | 6 cut(s) | 239, 863, 999, 1043, 1451, 2066 |
| BglII | AGATCT | 1 cut(s) | 2116 |
| BisI | GCNGC | 3 cut(s) | 118, 429, 485 |
| BlsI | GCNGC | 3 cut(s) | 119, 430, 486 |
| Bme1390I | CCNGG | 3 cut(s) | 181, 593, 2246 |
| Bme18I | GGWCC | 3 cut(s) | 1658, 1924, 2131 |
| BmgBI | CACGTC | 1 cut(s) | 2763 |
| BmgT120I | GGNCC | 5 cut(s) | 780, 781, 1658, 1924, 2131 |
| BmiI | GGNNCC | 7 cut(s) | 608, 781, 782, 2125, 2147, 2365, 2696 |
| BmrFI | CCNGG | 3 cut(s) | 181, 593, 2246 |
| BmrI | ACTGGG | 2 cut(s) | 2194, 2623 |
| BmsI | GCATC | 7 cut(s) | 142, 1506, 1835, 1879, 1999, 2167, 2263 |
| BmuI | ACTGGG | 2 cut(s) | 2194, 2623 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1922, 1954, 2207, 2239 |
| BpmI | CTGGAG | 3 cut(s) | 50, 167, 296 |
| Bpu10I | CCTNAGC | 2 cut(s) | 93, 2018 |
| BpuEI | CTTGAG | 2 cut(s) | 1949, 2425 |
| BsaAI | YACGTR | 1 cut(s) | 470 |
| BsaHI | GRCGYC | 1 cut(s) | 234 |
| BsaJI | CCNNGG | 5 cut(s) | 180, 1744, 2127, 2359, 2855 |
| BsaWI | WCCGGW | 2 cut(s) | 913, 1885 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 598, 626, 2140, 2205, 2456 |
| Bse118I | RCCGGY | 1 cut(s) | 913 |
| Bse1I | ACTGG | 6 cut(s) | 42, 197, 279, 957, 2200, 2618 |
| Bse3DI | GCAATG | 5 cut(s) | 381, 1059, 1461, 1971, 2312 |
| BseBI | CCWGG | 3 cut(s) | 181, 593, 2246 |
| BseDI | CCNNGG | 5 cut(s) | 180, 1744, 2127, 2359, 2855 |
| BseGI | GGATG | 9 cut(s) | 132, 157, 235, 601, 615, 636, 645, 1383, 1894 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 598, 626, 2140, 2205, 2456 |
| BseMI | GCAATG | 5 cut(s) | 381, 1059, 1461, 1971, 2312 |
| BseMII | CTCAG | 5 cut(s) | 84, 738, 1953, 2009, 2574 |
| BseNI | ACTGG | 6 cut(s) | 42, 197, 279, 957, 2200, 2618 |
| BseRI | GAGGAG | 2 cut(s) | 845, 2442 |
| BseSI | GKGCMC | 3 cut(s) | 784, 1545, 2699 |
| BseXI | GCAGC | 3 cut(s) | 129, 415, 496 |
| BseYI | CCCAGC | 1 cut(s) | 1294 |
| BsgI | GTGCAG | 1 cut(s) | 2300 |
| Bsh1236I | CGCG | 2 cut(s) | 23, 964 |
| BshFI | GGCC | 5 cut(s) | 179, 351, 499, 540, 782 |
| BshNI | GGYRCC | 2 cut(s) | 2363, 2694 |
| BshTI | ACCGGT | 1 cut(s) | 913 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1545, 1940, 2220 |
| BsiSI | CCGG | 2 cut(s) | 914, 1886 |
| BsiWI | CGTACG | 1 cut(s) | 219 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 598, 626, 2140, 2205, 2456 |
| BsmAI | GTCTC | 5 cut(s) | 183, 727, 1863, 2379, 2563 |
| BsmI | GAATGC | 3 cut(s) | 11, 94, 2314 |
| BsnI | GGCC | 5 cut(s) | 179, 351, 499, 540, 782 |
| Bsp120I | GGGCCC | 1 cut(s) | 780 |
| Bsp1286I | GDGCHC | 5 cut(s) | 784, 1545, 1940, 2220, 2699 |
| Bsp143I | GATC | 8 cut(s) | 727, 759, 1008, 1821, 2116, 2385, 2416, 2757 |
| Bsp19I | CCATGG | 3 cut(s) | 2127, 2359, 2855 |
| BspACI | CCGC | 6 cut(s) | 21, 71, 330, 1204, 1459, 2746 |
| BspANI | GGCC | 5 cut(s) | 179, 351, 499, 540, 782 |
| BspCNI | CTCAG | 5 cut(s) | 85, 737, 1952, 2010, 2573 |
| BspFNI | CGCG | 2 cut(s) | 23, 964 |
| BspLI | GGNNCC | 7 cut(s) | 608, 781, 782, 2125, 2147, 2365, 2696 |
| BspPI | GGATC | 3 cut(s) | 722, 1003, 2393 |
| BspT107I | GGYRCC | 2 cut(s) | 2363, 2694 |
| BsrDI | GCAATG | 5 cut(s) | 381, 1059, 1461, 1971, 2312 |
| BsrFI | RCCGGY | 1 cut(s) | 913 |
| BsrI | ACTGG | 6 cut(s) | 42, 197, 279, 957, 2200, 2618 |
| BssAI | RCCGGY | 1 cut(s) | 913 |
| BssECI | CCNNGG | 5 cut(s) | 180, 1744, 2127, 2359, 2855 |
| BssMI | GATC | 8 cut(s) | 727, 759, 1008, 1821, 2116, 2385, 2416, 2757 |
| BssNI | GRCGYC | 1 cut(s) | 234 |
| BssT1I | CCWWGG | 3 cut(s) | 2127, 2359, 2855 |
| Bst2UI | CCWGG | 3 cut(s) | 181, 593, 2246 |
| Bst4CI | ACNGT | 4 cut(s) | 421, 444, 1220, 1865 |
| Bst6I | CTCTTC | 1 cut(s) | 153 |
| BstACI | GRCGYC | 1 cut(s) | 234 |
| BstBAI | YACGTR | 1 cut(s) | 470 |
| BstC8I | GCNNGC | 1 cut(s) | 2606 |
| BstDEI | CTNAG | 7 cut(s) | 93, 724, 1274, 1772, 1939, 2018, 2560 |
| BstDSI | CCRYGG | 3 cut(s) | 2127, 2359, 2855 |
| BstEII | GGTNACC | 1 cut(s) | 955 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 624 |
| BstF5I | GGATG | 9 cut(s) | 132, 157, 235, 601, 615, 636, 645, 1383, 1894 |
| BstFNI | CGCG | 2 cut(s) | 23, 964 |
| BstHHI | GCGC | 1 cut(s) | 25 |
| BstKTI | GATC | 8 cut(s) | 730, 762, 1011, 1824, 2119, 2388, 2419, 2760 |
| BstMAI | GTCTC | 5 cut(s) | 183, 727, 1863, 2379, 2563 |
| BstMBI | GATC | 8 cut(s) | 727, 759, 1008, 1821, 2116, 2385, 2416, 2757 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 31, 137, 665, 2722 |
| BstNI | CCWGG | 3 cut(s) | 181, 593, 2246 |
| BstNSI | RCATGY | 1 cut(s) | 2608 |
| BstPI | GGTNACC | 1 cut(s) | 955 |
| BstSCI | CCNGG | 3 cut(s) | 179, 591, 2244 |
| BstSLI | GKGCMC | 3 cut(s) | 784, 1545, 2699 |
| BstUI | CGCG | 2 cut(s) | 23, 964 |
| BstV1I | GCAGC | 3 cut(s) | 129, 415, 496 |
| BstX2I | RGATCY | 2 cut(s) | 727, 2116 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1966 |
| BstYI | RGATCY | 2 cut(s) | 727, 2116 |
| BsuRI | GGCC | 5 cut(s) | 179, 351, 499, 540, 782 |
| BtgI | CCRYGG | 3 cut(s) | 2127, 2359, 2855 |
| BtgZI | GCGATG | 1 cut(s) | 2454 |
| BtrI | CACGTC | 1 cut(s) | 2763 |
| BtsCI | GGATG | 9 cut(s) | 132, 157, 235, 601, 615, 636, 645, 1383, 1894 |
| BtsI | GCAGTG | 3 cut(s) | 2283, 2711, 2741 |
| BtsIMutI | CAGTG | 6 cut(s) | 252, 762, 1870, 2283, 2711, 2741 |
| Cac8I | GCNNGC | 1 cut(s) | 2606 |
| CfoI | GCGC | 1 cut(s) | 25 |
| Cfr10I | RCCGGY | 1 cut(s) | 913 |
| Cfr13I | GGNCC | 5 cut(s) | 780, 781, 1658, 1924, 2131 |
| Csp6I | GTAC | 4 cut(s) | 220, 945, 1704, 2023 |
| CspAI | ACCGGT | 1 cut(s) | 913 |
| CviAII | CATG | 9 cut(s) | 1006, 1520, 1532, 1849, 2128, 2360, 2605, 2667, 2856 |
| CviQI | GTAC | 4 cut(s) | 220, 945, 1704, 2023 |
| DdeI | CTNAG | 7 cut(s) | 93, 724, 1274, 1772, 1939, 2018, 2560 |
| DpnI | GATC | 8 cut(s) | 729, 761, 1010, 1823, 2118, 2387, 2418, 2759 |
| DpnII | GATC | 8 cut(s) | 727, 759, 1008, 1821, 2116, 2385, 2416, 2757 |
| EaeI | YGGCCR | 3 cut(s) | 349, 497, 538 |
| Eam1104I | CTCTTC | 1 cut(s) | 153 |
| EarI | CTCTTC | 1 cut(s) | 153 |
| Eco130I | CCWWGG | 3 cut(s) | 2127, 2359, 2855 |
| Eco24I | GRGCYC | 1 cut(s) | 784 |
| Eco47I | GGWCC | 3 cut(s) | 1658, 1924, 2131 |
| Eco57I | CTGAAG | 3 cut(s) | 27, 1931, 2123 |
| Eco91I | GGTNACC | 1 cut(s) | 955 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 624 |
| EcoO109I | RGGNCCY | 1 cut(s) | 780 |
| EcoO65I | GGTNACC | 1 cut(s) | 955 |
| EcoRI | GAATTC | 2 cut(s) | 2565, 2641 |
| EcoRII | CCWGG | 3 cut(s) | 179, 591, 2244 |
| EcoT14I | CCWWGG | 3 cut(s) | 2127, 2359, 2855 |
| EcoT22I | ATGCAT | 4 cut(s) | 13, 1521, 1850, 2314 |
| EcoT38I | GRGCYC | 1 cut(s) | 784 |
| ErhI | CCWWGG | 3 cut(s) | 2127, 2359, 2855 |
| FaeI | CATG | 9 cut(s) | 1009, 1523, 1535, 1852, 2131, 2363, 2608, 2670, 2859 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1377, 1409, 1647, 1679 |
| FatI | CATG | 9 cut(s) | 1005, 1519, 1531, 1848, 2127, 2359, 2604, 2666, 2855 |
| FauI | CCCGC | 2 cut(s) | 337, 1197 |
| FauNDI | CATATG | 1 cut(s) | 2489 |
| Fnu4HI | GCNGC | 3 cut(s) | 118, 429, 485 |
| FokI | GGATG | 9 cut(s) | 119, 164, 242, 602, 608, 643, 652, 1390, 1901 |
| FriOI | GRGCYC | 1 cut(s) | 784 |
| Fsp4HI | GCNGC | 3 cut(s) | 118, 429, 485 |
| FspBI | CTAG | 6 cut(s) | 239, 863, 999, 1043, 1451, 2066 |
| GlaI | GCGC | 1 cut(s) | 24 |
| GluI | GCNGC | 3 cut(s) | 118, 429, 485 |
| GsaI | CCCAGC | 1 cut(s) | 1298 |
| GsuI | CTGGAG | 3 cut(s) | 50, 167, 296 |
| HaeIII | GGCC | 5 cut(s) | 179, 351, 499, 540, 782 |
| HapII | CCGG | 2 cut(s) | 914, 1886 |
| HhaI | GCGC | 1 cut(s) | 25 |
| Hin1I | GRCGYC | 1 cut(s) | 234 |
| Hin1II | CATG | 9 cut(s) | 1009, 1523, 1535, 1852, 2131, 2363, 2608, 2670, 2859 |
| Hin6I | GCGC | 1 cut(s) | 23 |
| HinP1I | GCGC | 1 cut(s) | 23 |
| HinfI | GANTC | 4 cut(s) | 1789, 1834, 2038, 2849 |
| HpaII | CCGG | 2 cut(s) | 914, 1886 |
| HphI | GGTGA | 8 cut(s) | 85, 196, 296, 967, 1124, 1628, 2303, 2506 |
| Hpy166II | GTNNAC | 5 cut(s) | 876, 1543, 1649, 1661, 2441 |
| Hpy188III | TCNNGA | 7 cut(s) | 29, 1303, 1472, 2057, 2206, 2562, 2777 |
| Hpy8I | GTNNAC | 5 cut(s) | 876, 1543, 1649, 1661, 2441 |
| HpyAV | CCTTC | 6 cut(s) | 275, 304, 985, 1649, 2621, 2800 |
| HpyCH4III | ACNGT | 4 cut(s) | 421, 444, 1220, 1865 |
| HpyCH4IV | ACGT | 4 cut(s) | 234, 469, 834, 2762 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 31, 137, 665, 2722 |
| HpyF3I | CTNAG | 7 cut(s) | 93, 724, 1274, 1772, 1939, 2018, 2560 |
| HpySE526I | ACGT | 4 cut(s) | 234, 469, 834, 2762 |
| Hsp92I | GRCGYC | 1 cut(s) | 234 |
| Hsp92II | CATG | 9 cut(s) | 1009, 1523, 1535, 1852, 2131, 2363, 2608, 2670, 2859 |
| HspAI | GCGC | 1 cut(s) | 23 |
| Kzo9I | GATC | 8 cut(s) | 727, 759, 1008, 1821, 2116, 2385, 2416, 2757 |
| LmnI | GCTCC | 4 cut(s) | 31, 1606, 2145, 2215 |
| Lsp1109I | GCAGC | 3 cut(s) | 129, 415, 496 |
| LweI | GCATC | 7 cut(s) | 142, 1506, 1835, 1879, 1999, 2167, 2263 |
| MaeI | CTAG | 6 cut(s) | 239, 863, 999, 1043, 1451, 2066 |
| MaeII | ACGT | 4 cut(s) | 234, 469, 834, 2762 |
| MaeIII | GTNAC | 9 cut(s) | 73, 298, 587, 685, 828, 955, 1001, 1347, 1380 |
| MalI | GATC | 8 cut(s) | 729, 761, 1010, 1823, 2118, 2387, 2418, 2759 |
| MboI | GATC | 8 cut(s) | 727, 759, 1008, 1821, 2116, 2385, 2416, 2757 |
| MfeI | CAATTG | 3 cut(s) | 334, 1687, 2844 |
| MflI | RGATCY | 2 cut(s) | 727, 2116 |
| MhlI | GDGCHC | 5 cut(s) | 784, 1545, 1940, 2220, 2699 |
| MlsI | TGGCCA | 1 cut(s) | 351 |
| MluNI | TGGCCA | 1 cut(s) | 351 |
| MlyI | GAGTC | 1 cut(s) | 1798 |
| MmeI | TCCRAC | 4 cut(s) | 177, 783, 1285, 2230 |
| Mox20I | TGGCCA | 1 cut(s) | 351 |
| Mph1103I | ATGCAT | 4 cut(s) | 13, 1521, 1850, 2314 |
| MroXI | GAANNNNTTC | 2 cut(s) | 102, 1833 |
| MscI | TGGCCA | 1 cut(s) | 351 |
| MseI | TTAA | 8 cut(s) | 566, 744, 1154, 1395, 1640, 1980, 1985, 2423 |
| MslI | CAYNNNNRTG | 3 cut(s) | 126, 1995, 2492 |
| Msp20I | TGGCCA | 1 cut(s) | 351 |
| MspI | CCGG | 2 cut(s) | 914, 1886 |
| MspR9I | CCNGG | 3 cut(s) | 181, 593, 2246 |
| MunI | CAATTG | 3 cut(s) | 334, 1687, 2844 |
| Mva1269I | GAATGC | 3 cut(s) | 11, 94, 2314 |
| MvaI | CCWGG | 3 cut(s) | 181, 593, 2246 |
| MvnI | CGCG | 2 cut(s) | 23, 964 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 31, 137, 665, 2722 |
| NcoI | CCATGG | 3 cut(s) | 2127, 2359, 2855 |
| NdeI | CATATG | 1 cut(s) | 2489 |
| NdeII | GATC | 8 cut(s) | 727, 759, 1008, 1821, 2116, 2385, 2416, 2757 |
| NlaIII | CATG | 9 cut(s) | 1009, 1523, 1535, 1852, 2131, 2363, 2608, 2670, 2859 |
| NlaIV | GGNNCC | 7 cut(s) | 608, 781, 782, 2125, 2147, 2365, 2696 |
| NmeAIII | GCCGAG | 1 cut(s) | 566 |
| NmuCI | GTSAC | 4 cut(s) | 73, 828, 955, 1380 |
| NsiI | ATGCAT | 4 cut(s) | 13, 1521, 1850, 2314 |
| NspI | RCATGY | 1 cut(s) | 2608 |
| PaeI | GCATGC | 1 cut(s) | 2608 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 240 |
| PctI | GAATGC | 3 cut(s) | 11, 94, 2314 |
| PdmI | GAANNNNTTC | 2 cut(s) | 102, 1833 |
| PfeI | GAWTC | 3 cut(s) | 1834, 2038, 2849 |
| Pfl23II | CGTACG | 1 cut(s) | 219 |
| PinAI | ACCGGT | 1 cut(s) | 913 |
| PkrI | GCNGC | 3 cut(s) | 119, 430, 486 |
| PleI | GAGTC | 1 cut(s) | 1797 |
| PpsI | GAGTC | 1 cut(s) | 1797 |
| Ppu21I | YACGTR | 1 cut(s) | 470 |
| PsiI | TTATAA | 1 cut(s) | 2013 |
| Psp6I | CCWGG | 3 cut(s) | 179, 591, 2244 |
| PspEI | GGTNACC | 1 cut(s) | 955 |
| PspFI | CCCAGC | 1 cut(s) | 1294 |
| PspGI | CCWGG | 3 cut(s) | 179, 591, 2244 |
| PspLI | CGTACG | 1 cut(s) | 219 |
| PspN4I | GGNNCC | 7 cut(s) | 608, 781, 782, 2125, 2147, 2365, 2696 |
| PspOMI | GGGCCC | 1 cut(s) | 780 |
| PspPI | GGNCC | 5 cut(s) | 780, 781, 1658, 1924, 2131 |
| PsuI | RGATCY | 2 cut(s) | 727, 2116 |
| RsaI | GTAC | 4 cut(s) | 221, 946, 1705, 2024 |
| RsaNI | GTAC | 4 cut(s) | 220, 945, 1704, 2023 |
| RseI | CAYNNNNRTG | 3 cut(s) | 126, 1995, 2492 |
| SaqAI | TTAA | 8 cut(s) | 566, 744, 1154, 1395, 1640, 1980, 1985, 2423 |
| SatI | GCNGC | 3 cut(s) | 118, 429, 485 |
| Sau3AI | GATC | 8 cut(s) | 727, 759, 1008, 1821, 2116, 2385, 2416, 2757 |
| Sau96I | GGNCC | 5 cut(s) | 780, 781, 1658, 1924, 2131 |
| SchI | GAGTC | 1 cut(s) | 1798 |
| ScrFI | CCNGG | 3 cut(s) | 181, 593, 2246 |
| SduI | GDGCHC | 5 cut(s) | 784, 1545, 1940, 2220, 2699 |
| SfaNI | GCATC | 7 cut(s) | 142, 1506, 1835, 1879, 1999, 2167, 2263 |
| SinI | GGWCC | 3 cut(s) | 1658, 1924, 2131 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 126, 1995, 2492 |
| SmlI | CTYRAG | 2 cut(s) | 1928, 2404 |
| SmoI | CTYRAG | 2 cut(s) | 1928, 2404 |
| SpeI | ACTAGT | 1 cut(s) | 998 |
| SphI | GCATGC | 1 cut(s) | 2608 |
| SsiI | CCGC | 6 cut(s) | 21, 71, 330, 1204, 1459, 2746 |
| SspI | AATATT | 1 cut(s) | 1501 |
| SspMI | CTAG | 6 cut(s) | 239, 863, 999, 1043, 1451, 2066 |
| StyD4I | CCNGG | 3 cut(s) | 179, 591, 2244 |
| StyI | CCWWGG | 3 cut(s) | 2127, 2359, 2855 |
| TaaI | ACNGT | 4 cut(s) | 421, 444, 1220, 1865 |
| TaiI | ACGT | 4 cut(s) | 237, 472, 837, 2765 |
| TaqI | TCGA | 1 cut(s) | 519 |
| TfiI | GAWTC | 3 cut(s) | 1834, 2038, 2849 |
| Tru1I | TTAA | 8 cut(s) | 566, 744, 1154, 1395, 1640, 1980, 1985, 2423 |
| Tru9I | TTAA | 8 cut(s) | 566, 744, 1154, 1395, 1640, 1980, 1985, 2423 |
| TscAI | CASTG | 6 cut(s) | 259, 769, 1870, 2283, 2718, 2748 |
| TseFI | GTSAC | 4 cut(s) | 73, 828, 955, 1380 |
| TseI | GCWGC | 3 cut(s) | 117, 428, 484 |
| Tsp45I | GTSAC | 4 cut(s) | 73, 828, 955, 1380 |
| TspRI | CASTG | 6 cut(s) | 259, 769, 1870, 2283, 2718, 2748 |
| VneI | GTGCAC | 1 cut(s) | 1541 |
| VpaK11BI | GGWCC | 3 cut(s) | 1658, 1924, 2131 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 624 |
| XceI | RCATGY | 1 cut(s) | 2608 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2252 |
| XmnI | GAANNNNTTC | 2 cut(s) | 102, 1833 |
| XspI | CTAG | 6 cut(s) | 239, 863, 999, 1043, 1451, 2066 |
| ZraI | GACGTC | 1 cut(s) | 235 |
| Zsp2I | ATGCAT | 4 cut(s) | 13, 1521, 1850, 2314 |