Rorug04G0421500

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
Physical Location & Seq
Forward (+)
58149088 .. 58150443
1356 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0421500.1

Sequence Viewer

Length: 1356 bp
ATGCAGAGGCGATTCCGGCAAGTCTTCACCGCTCTAAAAGAGCACAGCTCCGTGAGCTACGCCAAGATCGCCACGGTTGGAGGTTTCTGCAACGTGGAGTTCATCATCATAAAAGCAACAGCTCCGGATGACTTACCGTTGCCGGAAAAGTACATTCAAGAGCTCTTGAAAATCTTCTCCATCTCTCCATCCACCCTGAGTGACTTCTCACTCAGCTTCTCTCGCCGCTTCGGCAAGACTCGATGCTGGAGAGTTGCACTCAAGTGCTTGATCCTCCTCCACCGTCTGCTCCGTGCAGTCCCCGACGACAGTGCGTTTCGGAGTGAGCTCCTTTGGACACGTTCCATTGGCTTGCTGTCCCTCAACGACTGTCGCTTCCGTGACGATTCCTCCTCTGCTTCAGCAGACTACACAGCCTTTGTCAGATCCTATGCTCAGCTCCTCGACGAAGCTCTTCATTGCTTTTGCTTGGATAACGAGGCACCCGAAGAACCACAAAAACAATATCAAGAGGAAGGAGAAGAAGGAGAAGGAGAAGATGAACAAGAGGAAGAAGATGATGAACCGCAATTTCAGAGCTTATCAACCAAAATGGAAGAAATTAGTCGAATGCTTGAAATGTTGCCTCAGCTACAAAGCCTAACTGATCGAGTCATGGACTGCCGGCCAACTGGGCCGGCAGCTAAAAGCTTCTTGGTCCAAATGGCCATGAAACTTCTCATTCGAGACAGCTTTGTGTTTTACACAATCTTTAGGAGGGAAATTGTTATGGTTCTTGATAGCCTCTTTCAGATGCCTTATCGGAATTGCATATCAGCTTTTGGGATTTACAAGAAGGCAGCAGTGCAAGCAAATGACCTTTGTGAATTCTACGACTGGTGTAAGGCAATGGGATTGTGTGGTGCATATGAGTATCCATTTATCGATCGAATCCCACATATTCAAATCCATGCTCTAGAGAACTTCCTCCATGGAATGTGGCAGTTGACAGATCAGTCCTCTTCCACGCCGACCTCATCGTCATCCTCTTCTTTGGTGGAGTGCTCTAGTGAAACTGTAACGGAGGACGACAGCATTCTTGTTAGTACAAAATGGGAGAAGCCATTGATTCAGTTCGGTGGGGATCACGAGAACGAAAAGGCCTTAATTCTGTTTGGGAAAGATGCGGAGGAGAAGATGTTGATTCAGTTTGAAGAAGTGGAGGAGAGCTGGGAGAGCATTCTGGAAGCTTCCATCAATGTCTCACCTTCTTATCAACAAAACAATATGTTGTGCTTGTACAATCCGAACGTCGTTAATCCTTTCTATCACCATGGATTTGTTACCACCAACAACGCCATTCCTTCCTTAATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

451

Amino Acids

51.59

Weight (kDa)

4.77

Isoelectric Point (pI)

58.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANTH PF07651 35 - 324 3.7e-48 ANTH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 994, 1018
AccB1I GGYRCC 1 cut(s) 481
AccBSI CCGCTC 1 cut(s) 32
AccIII TCCGGA 1 cut(s) 124
AciI CCGC 4 cut(s) 30, 226, 566, 1166
AclWI GGATC 3 cut(s) 265, 420, 1131
AcoI YGGCCR 2 cut(s) 665, 705
AcsI RAATTY 1 cut(s) 866
AcuI CTGAAG 1 cut(s) 384
AfaI GTAC 3 cut(s) 152, 1087, 1280
AflIII ACRYGT 1 cut(s) 338
AgsI TTSAA 5 cut(s) 158, 169, 617, 944, 1193
AleI CACNNNNGTG 1 cut(s) 262
Alw21I GWGCWC 4 cut(s) 45, 165, 330, 1046
Alw26I GTCTC 2 cut(s) 720, 1246
AlwI GGATC 3 cut(s) 265, 420, 1131
Aor13HI TCCGGA 1 cut(s) 124
AoxI GGCC 4 cut(s) 665, 674, 705, 1140
ApeKI GCWGC 2 cut(s) 680, 839
ApoI RAATTY 1 cut(s) 866
Asp700I GAANNNNTTC 2 cut(s) 173, 453
AspS9I GGNCC 2 cut(s) 674, 697
AsuHPI GGTGA 3 cut(s) 19, 1236, 1301
AvaII GGWCC 1 cut(s) 697
BalI TGGCCA 1 cut(s) 707
BanI GGYRCC 1 cut(s) 481
BanII GRGCYC 2 cut(s) 165, 330
BauI CACGAG 1 cut(s) 1127
BbsI GAAGAC 1 cut(s) 16
Bbv12I GWGCWC 4 cut(s) 45, 165, 330, 1046
BbvCI CCTCAGC 1 cut(s) 627
BbvI GCAGC 2 cut(s) 692, 851
BccI CCATC 3 cut(s) 188, 196, 1241
BcgI CGANNNNNNTGC 2 cut(s) 293, 327
BciVI GTATCC 1 cut(s) 924
BcoDI GTCTC 2 cut(s) 720, 1246
BfaI CTAG 3 cut(s) 956, 1047, 1354
BfuI GTATCC 1 cut(s) 924
BglI GCCNNNNNGGC 2 cut(s) 231, 673
BisI GCNGC 3 cut(s) 226, 681, 840
BlpI GCTNAGC 1 cut(s) 435
BlsI GCNGC 3 cut(s) 227, 682, 841
Bme18I GGWCC 1 cut(s) 697
BmgT120I GGNCC 2 cut(s) 674, 697
BmiI GGNNCC 1 cut(s) 483
BmrI ACTGGG 1 cut(s) 681
BmsI GCATC 3 cut(s) 233, 783, 1153
BmuI ACTGGG 1 cut(s) 681
BpiI GAAGAC 1 cut(s) 16
BplI GAGNNNNNCTC 4 cut(s) 32, 64, 243, 275
BpmI CTGGAG 1 cut(s) 268
Bpu10I CCTNAGC 1 cut(s) 627
Bpu1102I GCTNAGC 1 cut(s) 435
BpuEI CTTGAG 1 cut(s) 245
Bsa29I ATCGAT 1 cut(s) 924
BsaJI CCNNGG 3 cut(s) 72, 970, 1312
BsaWI WCCGGW 1 cut(s) 124
BsaXI ACNNNNNCTCC 4 cut(s) 374, 404, 1163, 1193
Bse118I RCCGGY 2 cut(s) 663, 676
Bse1I ACTGG 2 cut(s) 676, 881
Bse3DI GCAATG 2 cut(s) 457, 894
BseAI TCCGGA 1 cut(s) 124
BseCI ATCGAT 1 cut(s) 924
BseDI CCNNGG 3 cut(s) 72, 970, 1312
BseGI GGATG 3 cut(s) 133, 188, 1022
BseMI GCAATG 2 cut(s) 457, 894
BseMII CTCAG 4 cut(s) 188, 226, 449, 641
BseNI ACTGG 2 cut(s) 676, 881
BseRI GAGGAG 5 cut(s) 266, 382, 431, 1184, 1217
BseXI GCAGC 2 cut(s) 692, 851
BseYI CCCAGC 1 cut(s) 1209
BsgI GTGCAG 1 cut(s) 315
Bsh1285I CGRYCG 1 cut(s) 928
BshFI GGCC 4 cut(s) 667, 676, 707, 1142
BshNI GGYRCC 1 cut(s) 481
BshVI ATCGAT 1 cut(s) 924
BsiEI CGRYCG 1 cut(s) 928
BsiHKAI GWGCWC 4 cut(s) 45, 165, 330, 1046
BsiSI CCGG 5 cut(s) 16, 125, 143, 664, 677
BslFI GGGAC 2 cut(s) 284, 343
BsmAI GTCTC 2 cut(s) 720, 1246
BsmFI GGGAC 2 cut(s) 284, 343
BsmI GAATGC 3 cut(s) 615, 1074, 1218
BsnI GGCC 4 cut(s) 667, 676, 707, 1142
Bsp1286I GDGCHC 4 cut(s) 45, 165, 330, 1046
Bsp13I TCCGGA 1 cut(s) 124
Bsp1407I TGTACA 1 cut(s) 1278
Bsp143I GATC 7 cut(s) 66, 270, 425, 646, 925, 991, 1123
Bsp1720I GCTNAGC 1 cut(s) 435
Bsp19I CCATGG 2 cut(s) 970, 1312
BspACI CCGC 4 cut(s) 30, 226, 566, 1166
BspANI GGCC 4 cut(s) 667, 676, 707, 1142
BspCNI CTCAG 4 cut(s) 189, 225, 448, 640
BspDI ATCGAT 1 cut(s) 924
BspEI TCCGGA 1 cut(s) 124
BspLI GGNNCC 1 cut(s) 483
BspPI GGATC 3 cut(s) 265, 420, 1131
BspQI GCTCTTC 1 cut(s) 459
BspT107I GGYRCC 1 cut(s) 481
BsrBI CCGCTC 1 cut(s) 32
BsrDI GCAATG 2 cut(s) 457, 894
BsrFI RCCGGY 2 cut(s) 663, 676
BsrGI TGTACA 1 cut(s) 1278
BsrI ACTGG 2 cut(s) 676, 881
BssAI RCCGGY 2 cut(s) 663, 676
BssECI CCNNGG 3 cut(s) 72, 970, 1312
BssMI GATC 7 cut(s) 66, 270, 425, 646, 925, 991, 1123
BssSI CACGAG 1 cut(s) 1127
BssT1I CCWWGG 2 cut(s) 970, 1312
Bst2BI CACGAG 1 cut(s) 1127
Bst4CI ACNGT 6 cut(s) 76, 138, 284, 311, 371, 1057
Bst6I CTCTTC 3 cut(s) 459, 1006, 1033
BstAUI TGTACA 1 cut(s) 1278
BstC8I GCNNGC 4 cut(s) 353, 665, 678, 849
BstDEI CTNAG 4 cut(s) 197, 212, 435, 627
BstDSI CCRYGG 3 cut(s) 72, 970, 1312
BstF5I GGATG 3 cut(s) 133, 188, 1022
BstKTI GATC 7 cut(s) 69, 273, 428, 649, 928, 994, 1126
BstMAI GTCTC 2 cut(s) 720, 1246
BstMBI GATC 7 cut(s) 66, 270, 425, 646, 925, 991, 1123
BstMCI CGRYCG 1 cut(s) 928
BstMWI GCNNNNNNNGC 8 cut(s) 16, 54, 68, 222, 231, 673, 848, 1215
BstV1I GCAGC 2 cut(s) 692, 851
BstV2I GAAGAC 1 cut(s) 16
BstX2I RGATCY 1 cut(s) 425
BstYI RGATCY 1 cut(s) 425
Bsu15I ATCGAT 1 cut(s) 924
BsuI GTATCC 1 cut(s) 924
BsuRI GGCC 4 cut(s) 667, 676, 707, 1142
BsuTUI ATCGAT 1 cut(s) 924
BtgI CCRYGG 3 cut(s) 72, 970, 1312
BtsCI GGATG 3 cut(s) 133, 188, 1022
BtsI GCAGTG 1 cut(s) 849
BtsIMutI CAGTG 2 cut(s) 316, 849
Cac8I GCNNGC 4 cut(s) 353, 665, 678, 849
Cfr10I RCCGGY 2 cut(s) 663, 676
Cfr13I GGNCC 2 cut(s) 674, 697
ClaI ATCGAT 1 cut(s) 924
Csp6I GTAC 3 cut(s) 151, 1086, 1279
CviAII CATG 5 cut(s) 655, 709, 950, 971, 1313
CviQI GTAC 3 cut(s) 151, 1086, 1279
DdeI CTNAG 4 cut(s) 197, 212, 435, 627
DpnI GATC 7 cut(s) 68, 272, 427, 648, 927, 993, 1125
DpnII GATC 7 cut(s) 66, 270, 425, 646, 925, 991, 1123
DrdI GACNNNNNNGTC 2 cut(s) 994, 1018
DseDI GACNNNNNNGTC 2 cut(s) 994, 1018
EaeI YGGCCR 2 cut(s) 665, 705
Eam1104I CTCTTC 3 cut(s) 459, 1006, 1033
EarI CTCTTC 3 cut(s) 459, 1006, 1033
Ecl136II GAGCTC 2 cut(s) 163, 328
Eco130I CCWWGG 2 cut(s) 970, 1312
Eco147I AGGCCT 1 cut(s) 1142
Eco24I GRGCYC 2 cut(s) 165, 330
Eco47I GGWCC 1 cut(s) 697
Eco53kI GAGCTC 2 cut(s) 163, 328
Eco57I CTGAAG 1 cut(s) 384
EcoICRI GAGCTC 2 cut(s) 163, 328
EcoRI GAATTC 1 cut(s) 866
EcoT14I CCWWGG 2 cut(s) 970, 1312
EcoT38I GRGCYC 2 cut(s) 165, 330
ErhI CCWWGG 2 cut(s) 970, 1312
FaeI CATG 5 cut(s) 658, 712, 953, 974, 1316
FaqI GGGAC 2 cut(s) 284, 343
FatI CATG 5 cut(s) 654, 708, 949, 970, 1312
FauNDI CATATG 1 cut(s) 907
Fnu4HI GCNGC 3 cut(s) 226, 681, 840
FokI GGATG 3 cut(s) 140, 175, 1009
FriOI GRGCYC 2 cut(s) 165, 330
Fsp4HI GCNGC 3 cut(s) 226, 681, 840
FspBI CTAG 3 cut(s) 956, 1047, 1354
GluI GCNGC 3 cut(s) 226, 681, 840
GsaI CCCAGC 1 cut(s) 1213
GsuI CTGGAG 1 cut(s) 268
HaeIII GGCC 4 cut(s) 667, 676, 707, 1142
HapII CCGG 5 cut(s) 16, 125, 143, 664, 677
Hin1II CATG 5 cut(s) 658, 712, 953, 974, 1316
HincII GTYRAC 1 cut(s) 987
HindII GTYRAC 1 cut(s) 987
HindIII AAGCTT 2 cut(s) 688, 1227
HinfI GANTC 7 cut(s) 12, 238, 386, 651, 930, 1108, 1183
HpaII CCGG 5 cut(s) 16, 125, 143, 664, 677
HphI GGTGA 3 cut(s) 19, 1236, 1301
Hpy166II GTNNAC 1 cut(s) 987
Hpy188I TCNGA 6 cut(s) 321, 425, 576, 792, 804, 1287
Hpy188III TCNNGA 9 cut(s) 125, 158, 166, 509, 725, 776, 956, 1127, 1223
Hpy8I GTNNAC 1 cut(s) 987
Hpy99I CGWCG 3 cut(s) 308, 449, 1295
HpyAV CCTTC 6 cut(s) 509, 518, 524, 829, 1257, 1353
HpyCH4III ACNGT 6 cut(s) 76, 138, 284, 311, 371, 1057
HpyCH4IV ACGT 3 cut(s) 93, 340, 1290
HpyCH4V TGCA 7 cut(s) 4, 90, 257, 296, 810, 847, 905
HpyF10VI GCNNNNNNNGC 8 cut(s) 16, 54, 68, 222, 231, 673, 848, 1215
HpyF3I CTNAG 4 cut(s) 197, 212, 435, 627
HpySE526I ACGT 3 cut(s) 93, 340, 1290
Hsp92II CATG 5 cut(s) 658, 712, 953, 974, 1316
Kpn2I TCCGGA 1 cut(s) 124
KroI GCCGGC 2 cut(s) 663, 676
KroNI GCCGGC 2 cut(s) 665, 678
Kzo9I GATC 7 cut(s) 66, 270, 425, 646, 925, 991, 1123
LguI GCTCTTC 1 cut(s) 459
LmnI GCTCC 5 cut(s) 53, 127, 294, 333, 444
Lsp1109I GCAGC 2 cut(s) 692, 851
LweI GCATC 3 cut(s) 233, 783, 1153
MaeI CTAG 3 cut(s) 956, 1047, 1354
MaeII ACGT 3 cut(s) 93, 340, 1290
MaeIII GTNAC 4 cut(s) 200, 380, 1057, 1321
MalI GATC 7 cut(s) 68, 272, 427, 648, 927, 993, 1125
MbiI CCGCTC 1 cut(s) 32
MboI GATC 7 cut(s) 66, 270, 425, 646, 925, 991, 1123
MflI RGATCY 1 cut(s) 425
MhlI GDGCHC 4 cut(s) 45, 165, 330, 1046
MlsI TGGCCA 1 cut(s) 707
MluCI AATT 6 cut(s) 569, 600, 762, 805, 866, 1146
MluNI TGGCCA 1 cut(s) 707
MlyI GAGTC 2 cut(s) 232, 660
MmeI TCCRAC 1 cut(s) 58
Mox20I TGGCCA 1 cut(s) 707
MroI TCCGGA 1 cut(s) 124
MroNI GCCGGC 2 cut(s) 663, 676
MroXI GAANNNNTTC 2 cut(s) 173, 453
MscI TGGCCA 1 cut(s) 707
MseI TTAA 3 cut(s) 1145, 1296, 1349
MslI CAYNNNNRTG 1 cut(s) 262
Msp20I TGGCCA 1 cut(s) 707
MspI CCGG 5 cut(s) 16, 125, 143, 664, 677
Mva1269I GAATGC 3 cut(s) 615, 1074, 1218
MwoI GCNNNNNNNGC 8 cut(s) 16, 54, 68, 222, 231, 673, 848, 1215
NaeI GCCGGC 2 cut(s) 665, 678
NcoI CCATGG 2 cut(s) 970, 1312
NdeI CATATG 1 cut(s) 907
NdeII GATC 7 cut(s) 66, 270, 425, 646, 925, 991, 1123
NgoMIV GCCGGC 2 cut(s) 663, 676
NlaIII CATG 5 cut(s) 658, 712, 953, 974, 1316
NlaIV GGNNCC 1 cut(s) 483
NmuCI GTSAC 2 cut(s) 200, 380
OliI CACNNNNGTG 1 cut(s) 262
PceI AGGCCT 1 cut(s) 1142
PciSI GCTCTTC 1 cut(s) 459
PcsI WCGNNNNNNNCGW 1 cut(s) 483
PctI GAATGC 3 cut(s) 615, 1074, 1218
PdiI GCCGGC 2 cut(s) 665, 678
PdmI GAANNNNTTC 2 cut(s) 173, 453
PfeI GAWTC 5 cut(s) 12, 386, 930, 1108, 1183
PkrI GCNGC 3 cut(s) 227, 682, 841
Ple19I CGATCG 1 cut(s) 928
PleI GAGTC 2 cut(s) 232, 659
PpsI GAGTC 2 cut(s) 232, 659
Psp124BI GAGCTC 2 cut(s) 165, 330
PspFI CCCAGC 1 cut(s) 1209
PspN4I GGNNCC 1 cut(s) 483
PspPI GGNCC 2 cut(s) 674, 697
PsuI RGATCY 1 cut(s) 425
PvuI CGATCG 1 cut(s) 928
RsaI GTAC 3 cut(s) 152, 1087, 1280
RsaNI GTAC 3 cut(s) 151, 1086, 1279
RseI CAYNNNNRTG 1 cut(s) 262
SacI GAGCTC 2 cut(s) 165, 330
SapI GCTCTTC 1 cut(s) 459
SaqAI TTAA 3 cut(s) 1145, 1296, 1349
SatI GCNGC 3 cut(s) 226, 681, 840
Sau3AI GATC 7 cut(s) 66, 270, 425, 646, 925, 991, 1123
Sau96I GGNCC 2 cut(s) 674, 697
SchI GAGTC 2 cut(s) 232, 660
SduI GDGCHC 4 cut(s) 45, 165, 330, 1046
SfaNI GCATC 3 cut(s) 233, 783, 1153
SfiI GGCCNNNNNGGCC 1 cut(s) 673
SinI GGWCC 1 cut(s) 697
SmiMI CAYNNNNRTG 1 cut(s) 262
SmlI CTYRAG 1 cut(s) 260
SmoI CTYRAG 1 cut(s) 260
Sse9I AATT 6 cut(s) 569, 600, 762, 805, 866, 1146
SseBI AGGCCT 1 cut(s) 1142
SsiI CCGC 4 cut(s) 30, 226, 566, 1166
SspMI CTAG 3 cut(s) 956, 1047, 1354
SstI GAGCTC 2 cut(s) 165, 330
StuI AGGCCT 1 cut(s) 1142
StyI CCWWGG 2 cut(s) 970, 1312
TaaI ACNGT 6 cut(s) 76, 138, 284, 311, 371, 1057
TaiI ACGT 3 cut(s) 96, 343, 1293
TaqI TCGA 7 cut(s) 241, 444, 607, 649, 724, 924, 928
TasI AATT 6 cut(s) 569, 600, 762, 805, 866, 1146
TatI WGTACW 3 cut(s) 150, 1085, 1278
TauI GCSGC 1 cut(s) 228
TfiI GAWTC 5 cut(s) 12, 386, 930, 1108, 1183
Tru1I TTAA 3 cut(s) 1145, 1296, 1349
Tru9I TTAA 3 cut(s) 1145, 1296, 1349
TscAI CASTG 2 cut(s) 316, 849
TseFI GTSAC 2 cut(s) 200, 380
TseI GCWGC 2 cut(s) 680, 839
Tsp45I GTSAC 2 cut(s) 200, 380
TspDTI ATGAA 5 cut(s) 91, 446, 555, 576, 725
TspGWI ACGGA 4 cut(s) 40, 281, 368, 1076
TspRI CASTG 2 cut(s) 316, 849
VpaK11BI GGWCC 1 cut(s) 697
XapI RAATTY 1 cut(s) 866
XbaI TCTAGA 1 cut(s) 955
XmnI GAANNNNTTC 2 cut(s) 173, 453
XspI CTAG 3 cut(s) 956, 1047, 1354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.