Rmu_sc0001626.1_g000007

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001626.1
OG0000018
Physical Location & Seq
Forward (+)
31886 .. 36189
4304 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001626.1_g000007.1.cds

Sequence Viewer

Length: 3201 bp
atggccgaggcactcattgccgtggttctggaacaattggttacagtttcttttgaccacacaaaagaagctgggaagctgattttgaatgctaagaaagaggtcgaaaatttcggcagcaatctagaagcaattcaagctgtgctcgaggatgctgagaagcagcaagtggagaaggctagcgtgagaaactggttggataagctgaatgatgtctcttacgagatggttgacgtgctagataagtggaacactgaaattctgaaacaagaggtgacaaagaaaacctccaagaaggtatgtttctccattccctcgaattgcttttgttttggcctggtccataaggcaattcatcttcataaaatagctaccgagatgaaagagttgaacgaaaagctaactctgattactgatcagagaaaaaactttgagtttcatcaatcctcaactcgtaggaatgatgaacaacttaagcaacagctaaaaacttcatcatttgtcgatagttctaaaatatttggcagagaagaagcagaagctaatttgttaagcaagttgttgagtgatagtagtgaagaagggaaaagggtccttgtcatccctatagtgggtatgggagggatgggcaaaacaactcttgcccaattagcctgcaacaatgaagatgtaaaaacctattttgaaaagagaatatgggtttgtgtctcagatccttttgatgggatgaagattgccagagccattattaggggtactggtagtgatgaagacaaaaatttaaatgagttggaagaagtcttgcagtgtatgtctagatgtattaaggataaaaagtgcttgatttttctagatgatgtgtggaccgaagaccaaagagagtgggaaagtttaaacttacctttaataatggaaaaaaattgtgctaaaggtagtaaaatagtggtgaccacacgaaaagagagagttgctgagataatgggagcaaccactcaaatgatccatttggagaagctgaatgataaaaattgtttggcattgttcaatagcattgcatatttggggagggaagaagatgaggctaatggatttggagctataggtgagaaaatagcaaaaaagtgtaacggcttgccacttgctgcaaaaactttaggtgctctcttgcggtataagaaggaaatgggagattggcaggaggtcttggatagtaagatatggcttctaaaagaggttgagcaacaagtatttcaaccacttttattaagttattatgagttggcccctatagttaagcgttgtcttttatactgtgctacatttccaaaagattattggttcaagaaacacaatttgattgagctgtggatgtcacaggattatcttagtgggcaagaccataaagaaaagggaaaaataggtcaaaatgttttcgataccttagtaatgcgatcatttttccaagaagttgtgaaagaagtagatgttgatgacaagagcattactgtattttgcaaaatgcatgatattgtgcatgactttgtgcagttcctcaataagaatgaatgttttacaatggaggctaaggaagtagacggaagaaaaacggtaaaaagtgaggaggtccgtcatttgacgttaatgtttgcaccctttgattctccactttcggattttatttcaccggtcaatcagaaaaagttacgtactcttgcaacttttgattcaagcatgggtagcatagatataaaagcaatctcacaactgaaatgtctgaggaccttaaatttgagctgcaactacaacattgaagaacttccagaagagatcggtaaattgatacatttgaggtatctcgatttgtctgaaaatcttttggataaactaccggacagtgtgggaaatttatacaatttgcaaaccttgtgtcttactgggtgcgagagccttagatcactgcctgaaaatatggggaacttgattaatttaagacatcttcataacaagggttgtcttaacatagagtatttgccgagaggtatggcgagattaacaagtctgcaaacactaaatacgtgtcgagttactactaatgatagtggccccggtaaaggcttgaaattaggagatctgggaagcttgggccagcttcagggtagtctccacattaaaatcaaggggaatttgaaggttacggatacgagtgaggcgcagaaggctctcttgtggaataaaaagcttcattatttgaagctacattttgaaggattggaggagcagagccatgtacaagtcctggaggcgttacggccgcatcacgatctagaaagattggagcagcagagccatgtacaagtcctggaggcgttacggccgcatcacgatctagaaaatttaaaaatttggcggtatcttggcaccaccgcgcccagttggatgatatccttacagaatttgagatccctttctctttgggactggcgtgaatgcgaatttttgcctcctcttgggaaattgccgttgcttgaagaactatcagtgcaatggttggacaaagtgaagacggttggagatgaatttttaggaataacgggcactcaaacatcatcatcctcctcctctgttttattcccaaaattgaaacaactcaccttccaatgcatgattggttggaaacagtgggaaggagttggagggtggacggaaaacggtggtgatgaaattagaattatgccatgccttgtttccttcacaattcgggagtgccctcagctgatgaacctgccactcttcttgcaaaagacgccggtcaggaatgttgtcatcaggggatgtcgtcggtgttttagaatgcctgtctggcccgagaactggttgaaacagagacacagggagatgaggagatcaccaccatcacctgaaacttcaaagcttaaagactgctactgtaaatatgtcttaggagacatggcaatgagttacagattaaatgatgcctcaactatctcactttcttttcctaagaaaatgttcccacatcacccttttagtgagatcagacctcagagtagcagtggatcagcagaacatgacacttatgtagtcttgatgttaaaggcttcagttttcagttgcaaggagttagatgatgctgatgatgttgataatgattgcggtgatgatgagcaagatgatgattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

1066

Amino Acids

121.76

Weight (kDa)

6.15

Isoelectric Point (pI)

46.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2790
AccB1I GGYRCC 1 cut(s) 2417
AccI GTMKAC 1 cut(s) 1593
AccII CGCG 1 cut(s) 2426
AciI CCGC 6 cut(s) 1168, 2312, 2375, 2407, 2424, 3174
AclWI GGATC 4 cut(s) 707, 994, 2454, 3085
AcoI YGGCCR 3 cut(s) 3, 2309, 2372
AcuI CTGAAG 2 cut(s) 2135, 3105
AcyI GRCGYC 1 cut(s) 2804
AfaI GTAC 4 cut(s) 757, 1708, 2289, 2352
AfiI CCNNNNNNNGG 8 cut(s) 610, 611, 722, 750, 2111, 2152, 2507, 2871
AflII CTTAAG 1 cut(s) 473
AflIII ACRYGT 1 cut(s) 2075
AgeI ACCGGT 1 cut(s) 1684
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 3 cut(s) 336, 2295, 2358
Alw21I GWGCWC 2 cut(s) 147, 1162
Alw26I GTCTC 5 cut(s) 220, 712, 2165, 2878, 2958
AlwI GGATC 4 cut(s) 707, 994, 2454, 3085
Ama87I CYCGRG 2 cut(s) 146, 2864
AoxI GGCC 8 cut(s) 3, 334, 1281, 2101, 2143, 2309, 2372, 2861
ApeKI GCWGC 5 cut(s) 117, 163, 1142, 1794, 2338
ArsI GACNNNNNNTTYG 4 cut(s) 1771, 1803, 1912, 1944
AseI ATTAAT 1 cut(s) 1983
AsiGI ACCGGT 1 cut(s) 1684
Asp700I GAANNNNTTC 3 cut(s) 132, 1815, 3029
AspLEI GCGC 2 cut(s) 2212, 2428
AspS9I GGNCC 9 cut(s) 340, 592, 864, 1282, 1624, 1779, 2102, 2143, 2862
AsuC2I CCSGG 1 cut(s) 2106
AsuNHI GCTAGC 1 cut(s) 179
AvaI CYCGRG 2 cut(s) 146, 2864
AvaII GGWCC 5 cut(s) 340, 592, 864, 1624, 1779
BaeGI GKGCMC 2 cut(s) 2597, 2768
BaeI ACNNNNGTAYC 2 cut(s) 1428, 1461
BanI GGYRCC 1 cut(s) 2417
BbsI GAAGAC 3 cut(s) 777, 876, 2567
Bbv12I GWGCWC 2 cut(s) 147, 1162
BbvCI CCTCAGC 1 cut(s) 2769
BbvI GCAGC 5 cut(s) 129, 175, 1129, 1781, 2350
BccI CCATC 4 cut(s) 220, 619, 716, 2920
BceAI ACGGC 5 cut(s) 5, 1144, 2324, 2387, 2503
BciT130I CCWGG 3 cut(s) 338, 2297, 2360
BciVI GTATCC 1 cut(s) 2191
BclI TGATCA 1 cut(s) 415
BcnI CCSGG 1 cut(s) 2106
BcoDI GTCTC 5 cut(s) 220, 712, 2165, 2878, 2958
BfaI CTAG 7 cut(s) 125, 180, 239, 816, 851, 2324, 2387
BfmI CTRYAG 3 cut(s) 606, 1098, 1287
BfrI CTTAAG 1 cut(s) 473
BfuAI ACCTGC 1 cut(s) 2790
BfuI GTATCC 1 cut(s) 2191
BglI GCCNNNNNGGC 1 cut(s) 2860
BglII AGATCT 1 cut(s) 2128
BisI GCNGC 7 cut(s) 118, 164, 1143, 1795, 2312, 2339, 2375
BlsI GCNGC 7 cut(s) 119, 165, 1144, 1796, 2313, 2340, 2376
Bme1390I CCNGG 4 cut(s) 338, 2106, 2297, 2360
Bme18I GGWCC 5 cut(s) 340, 592, 864, 1624, 1779
BmeT110I CYCGRG 2 cut(s) 146, 2864
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 9 cut(s) 340, 592, 864, 1282, 1624, 1779, 2102, 2143, 2862
BmiI GGNNCC 4 cut(s) 593, 1284, 2104, 2419
BmrFI CCNGG 4 cut(s) 338, 2106, 2297, 2360
BmrI ACTGGG 2 cut(s) 1944, 2424
BmsI GCATC 5 cut(s) 142, 2323, 2386, 2983, 3139
BmtI GCTAGC 1 cut(s) 183
BmuI ACTGGG 2 cut(s) 1944, 2424
BoxI GACNNNNGTC 1 cut(s) 2807
BpiI GAAGAC 3 cut(s) 777, 876, 2567
BpmI CTGGAG 2 cut(s) 2318, 2381
Bpu10I CCTNAGC 2 cut(s) 1584, 2769
BpuMI CCSGG 1 cut(s) 2106
BsaAI YACGTR 2 cut(s) 1706, 2076
BsaHI GRCGYC 1 cut(s) 2804
BsaJI CCNNGG 3 cut(s) 6, 21, 2104
BsaWI WCCGGW 2 cut(s) 1684, 1888
Bsc4I CCNNNNNNNGG 8 cut(s) 610, 611, 722, 750, 2111, 2152, 2507, 2871
Bse118I RCCGGY 2 cut(s) 1684, 2806
Bse1I ACTGG 6 cut(s) 197, 763, 1939, 2430, 2483, 2876
Bse3DI GCAATG 4 cut(s) 15, 1050, 2549, 2979
BseBI CCWGG 3 cut(s) 338, 2297, 2360
BseDI CCNNGG 3 cut(s) 6, 21, 2104
BseGI GGATG 8 cut(s) 157, 600, 630, 732, 1374, 2442, 2609, 2837
BseLI CCNNNNNNNGG 8 cut(s) 610, 611, 722, 750, 2111, 2152, 2507, 2871
BseMI GCAATG 4 cut(s) 15, 1050, 2549, 2979
BseMII CTCAG 6 cut(s) 147, 723, 963, 1766, 2783, 3077
BseNI ACTGG 6 cut(s) 197, 763, 1939, 2430, 2483, 2876
BseRI GAGGAG 6 cut(s) 1634, 2288, 2493, 2605, 2608, 2914
BseSI GKGCMC 2 cut(s) 2597, 2768
BseX3I CGGCCG 2 cut(s) 2309, 2372
BseXI GCAGC 5 cut(s) 129, 175, 1129, 1781, 2350
BseYI CCCAGC 1 cut(s) 71
BsgI GTGCAG 1 cut(s) 1565
Bsh1236I CGCG 1 cut(s) 2426
Bsh1285I CGRYCG 2 cut(s) 2312, 2375
BshFI GGCC 8 cut(s) 5, 336, 1283, 2103, 2145, 2311, 2374, 2863
BshNI GGYRCC 1 cut(s) 2417
BshTI ACCGGT 1 cut(s) 1684
BsiEI CGRYCG 2 cut(s) 2312, 2375
BsiHKAI GWGCWC 2 cut(s) 147, 1162
BsiHKCI CYCGRG 2 cut(s) 146, 2864
BsiSI CCGG 4 cut(s) 1685, 1889, 2106, 2807
BslFI GGGAC 1 cut(s) 2489
BslI CCNNNNNNNGG 8 cut(s) 610, 611, 722, 750, 2111, 2152, 2507, 2871
BsmAI GTCTC 5 cut(s) 220, 712, 2165, 2878, 2958
BsmFI GGGAC 1 cut(s) 2489
BsmI GAATGC 3 cut(s) 94, 2492, 2856
BsnI GGCC 8 cut(s) 5, 336, 1283, 2103, 2145, 2311, 2374, 2863
BsoBI CYCGRG 2 cut(s) 146, 2864
Bsp1286I GDGCHC 4 cut(s) 147, 1162, 2597, 2768
Bsp1407I TGTACA 2 cut(s) 2287, 2350
BspACI CCGC 6 cut(s) 1168, 2312, 2375, 2407, 2424, 3174
BspANI GGCC 8 cut(s) 5, 336, 1283, 2103, 2145, 2311, 2374, 2863
BspCNI CTCAG 6 cut(s) 148, 722, 964, 1767, 2782, 3076
BspFNI CGCG 1 cut(s) 2426
BspLI GGNNCC 4 cut(s) 593, 1284, 2104, 2419
BspMI ACCTGC 1 cut(s) 2790
BspOI GCTAGC 1 cut(s) 183
BspPI GGATC 4 cut(s) 707, 994, 2454, 3085
BspT107I GGYRCC 1 cut(s) 2417
BspTI CTTAAG 1 cut(s) 473
BsrDI GCAATG 4 cut(s) 15, 1050, 2549, 2979
BsrFI RCCGGY 2 cut(s) 1684, 2806
BsrGI TGTACA 2 cut(s) 2287, 2350
BsrI ACTGG 6 cut(s) 197, 763, 1939, 2430, 2483, 2876
BssAI RCCGGY 2 cut(s) 1684, 2806
BssECI CCNNGG 3 cut(s) 6, 21, 2104
BssNI GRCGYC 1 cut(s) 2804
Bst2UI CCWGG 3 cut(s) 338, 2297, 2360
Bst4CI ACNGT 9 cut(s) 46, 1313, 1507, 1609, 1895, 2566, 2679, 2711, 2948
Bst6I CTCTTC 2 cut(s) 1818, 2795
BstACI GRCGYC 1 cut(s) 2804
BstAFI CTTAAG 1 cut(s) 473
BstAPI GCANNNNNTGC 1 cut(s) 17
BstAUI TGTACA 2 cut(s) 2287, 2350
BstBAI YACGTR 2 cut(s) 1706, 2076
BstC8I GCNNGC 4 cut(s) 181, 655, 1133, 2147
BstDSI CCRYGG 1 cut(s) 21
BstEII GGTNACC 1 cut(s) 946
BstF5I GGATG 8 cut(s) 157, 600, 630, 732, 1374, 2442, 2609, 2837
BstFNI CGCG 1 cut(s) 2426
BstHHI GCGC 2 cut(s) 2212, 2428
BstMAI GTCTC 5 cut(s) 220, 712, 2165, 2878, 2958
BstMCI CGRYCG 2 cut(s) 2312, 2375
BstMWI GCNNNNNNNGC 7 cut(s) 17, 137, 650, 1737, 2216, 2803, 2860
BstNI CCWGG 3 cut(s) 338, 2297, 2360
BstPAI GACNNNNGTC 1 cut(s) 2807
BstPI GGTNACC 1 cut(s) 946
BstSCI CCNGG 4 cut(s) 336, 2104, 2295, 2358
BstSFI CTRYAG 3 cut(s) 606, 1098, 1287
BstSLI GKGCMC 2 cut(s) 2597, 2768
BstSNI TACGTA 1 cut(s) 1706
BstUI CGCG 1 cut(s) 2426
BstV1I GCAGC 5 cut(s) 129, 175, 1129, 1781, 2350
BstV2I GAAGAC 3 cut(s) 777, 876, 2567
BstX2I RGATCY 3 cut(s) 712, 2128, 2459
BstYI RGATCY 3 cut(s) 712, 2128, 2459
BstZI CGGCCG 2 cut(s) 2309, 2372
BsuI GTATCC 1 cut(s) 2191
BsuRI GGCC 8 cut(s) 5, 336, 1283, 2103, 2145, 2311, 2374, 2863
BtgI CCRYGG 1 cut(s) 21
BtrI CACGTC 1 cut(s) 235
BtsCI GGATG 8 cut(s) 157, 600, 630, 732, 1374, 2442, 2609, 2837
BtsI GCAGTG 3 cut(s) 812, 1955, 3079
BtsIMutI CAGTG 7 cut(s) 252, 812, 1900, 1955, 2544, 2684, 3079
BveI ACCTGC 1 cut(s) 2790
Cac8I GCNNGC 4 cut(s) 181, 655, 1133, 2147
CfoI GCGC 2 cut(s) 2212, 2428
Cfr10I RCCGGY 2 cut(s) 1684, 2806
Cfr13I GGNCC 9 cut(s) 340, 592, 864, 1282, 1624, 1779, 2102, 2143, 2862
CseI GACGC 1 cut(s) 2812
Csp6I GTAC 4 cut(s) 756, 1707, 2288, 2351
CspAI ACCGGT 1 cut(s) 1684
CspCI CAANNNNNGTGG 4 cut(s) 863, 898, 2775, 2810
CviAII CATG 9 cut(s) 1523, 1535, 1732, 2285, 2348, 2662, 2736, 2968, 3089
CviQI GTAC 4 cut(s) 756, 1707, 2288, 2351
DraI TTTAAA 3 cut(s) 783, 894, 2397
EaeI YGGCCR 3 cut(s) 3, 2309, 2372
EagI CGGCCG 2 cut(s) 2309, 2372
Eam1104I CTCTTC 2 cut(s) 1818, 2795
EarI CTCTTC 2 cut(s) 1818, 2795
EclXI CGGCCG 2 cut(s) 2309, 2372
Eco105I TACGTA 1 cut(s) 1706
Eco32I GATATC 1 cut(s) 2442
Eco47I GGWCC 5 cut(s) 340, 592, 864, 1624, 1779
Eco52I CGGCCG 2 cut(s) 2309, 2372
Eco57I CTGAAG 2 cut(s) 2135, 3105
Eco88I CYCGRG 2 cut(s) 146, 2864
Eco91I GGTNACC 1 cut(s) 946
EcoO109I RGGNCCY 2 cut(s) 592, 1779
EcoO65I GGTNACC 1 cut(s) 946
EcoRII CCWGG 3 cut(s) 336, 2295, 2358
EcoRV GATATC 1 cut(s) 2442
EcoT22I ATGCAT 2 cut(s) 1524, 2663
FaeI CATG 9 cut(s) 1526, 1538, 1735, 2288, 2351, 2665, 2739, 2971, 3092
FalI AAGNNNNNCTT 2 cut(s) 2207, 2239
FaqI GGGAC 1 cut(s) 2489
FatI CATG 9 cut(s) 1522, 1534, 1731, 2284, 2347, 2661, 2735, 2967, 3088
FbaI TGATCA 1 cut(s) 415
FblI GTMKAC 1 cut(s) 1593
Fnu4HI GCNGC 7 cut(s) 118, 164, 1143, 1795, 2312, 2339, 2375
FokI GGATG 8 cut(s) 164, 587, 637, 739, 1381, 2449, 2596, 2844
Fsp4HI GCNGC 7 cut(s) 118, 164, 1143, 1795, 2312, 2339, 2375
FspBI CTAG 7 cut(s) 125, 180, 239, 816, 851, 2324, 2387
GlaI GCGC 2 cut(s) 2211, 2427
GluI GCNGC 7 cut(s) 118, 164, 1143, 1795, 2312, 2339, 2375
GsaI CCCAGC 1 cut(s) 75
GsuI CTGGAG 2 cut(s) 2318, 2381
HaeIII GGCC 8 cut(s) 5, 336, 1283, 2103, 2145, 2311, 2374, 2863
HapII CCGG 4 cut(s) 1685, 1889, 2106, 2807
HgaI GACGC 1 cut(s) 2812
HhaI GCGC 2 cut(s) 2212, 2428
Hin1I GRCGYC 1 cut(s) 2804
Hin1II CATG 9 cut(s) 1526, 1538, 1735, 2288, 2351, 2665, 2739, 2971, 3092
Hin6I GCGC 2 cut(s) 2210, 2426
HinP1I GCGC 2 cut(s) 2210, 2426
HincII GTYRAC 1 cut(s) 232
HindII GTYRAC 1 cut(s) 232
HindIII AAGCTT 3 cut(s) 2137, 2237, 2930
HinfI GANTC 2 cut(s) 1658, 1724
HpaII CCGG 4 cut(s) 1685, 1889, 2106, 2807
Hpy166II GTNNAC 4 cut(s) 232, 864, 1594, 2700
Hpy8I GTNNAC 4 cut(s) 232, 864, 1594, 2700
Hpy99I CGWCG 1 cut(s) 2841
HpyCH4III ACNGT 9 cut(s) 46, 1313, 1507, 1609, 1895, 2566, 2679, 2711, 2948
HpyCH4IV ACGT 4 cut(s) 234, 1637, 1705, 2075
HpyF10VI GCNNNNNNNGC 7 cut(s) 17, 137, 650, 1737, 2216, 2803, 2860
HpySE526I ACGT 4 cut(s) 234, 1637, 1705, 2075
Hsp92I GRCGYC 1 cut(s) 2804
Hsp92II CATG 9 cut(s) 1526, 1538, 1735, 2288, 2351, 2665, 2739, 2971, 3092
HspAI GCGC 2 cut(s) 2210, 2426
Ksp22I TGATCA 1 cut(s) 415
LmnI GCTCC 4 cut(s) 983, 1094, 2275, 2335
Lsp1109I GCAGC 5 cut(s) 129, 175, 1129, 1781, 2350
LweI GCATC 5 cut(s) 142, 2323, 2386, 2983, 3139
MaeI CTAG 7 cut(s) 125, 180, 239, 816, 851, 2324, 2387
MaeII ACGT 4 cut(s) 234, 1637, 1705, 2075
MfeI CAATTG 1 cut(s) 35
MflI RGATCY 3 cut(s) 712, 2128, 2459
MhlI GDGCHC 4 cut(s) 147, 1162, 2597, 2768
MmeI TCCRAC 7 cut(s) 177, 771, 2414, 2529, 2548, 2651, 2671
Mph1103I ATGCAT 2 cut(s) 1524, 2663
MroXI GAANNNNTTC 3 cut(s) 132, 1815, 3029
MslI CAYNNNNRTG 3 cut(s) 20, 995, 2972
MspA1I CMGCKG 1 cut(s) 2773
MspCI CTTAAG 1 cut(s) 473
MspI CCGG 4 cut(s) 1685, 1889, 2106, 2807
MspR9I CCNGG 4 cut(s) 338, 2106, 2297, 2360
MssI GTTTAAAC 1 cut(s) 894
MunI CAATTG 1 cut(s) 35
Mva1269I GAATGC 3 cut(s) 94, 2492, 2856
MvaI CCWGG 3 cut(s) 338, 2297, 2360
MvnI CGCG 1 cut(s) 2426
MwoI GCNNNNNNNGC 7 cut(s) 17, 137, 650, 1737, 2216, 2803, 2860
NciI CCSGG 1 cut(s) 2106
NheI GCTAGC 1 cut(s) 179
NlaIII CATG 9 cut(s) 1526, 1538, 1735, 2288, 2351, 2665, 2739, 2971, 3092
NlaIV GGNNCC 4 cut(s) 593, 1284, 2104, 2419
NmeAIII GCCGAG 2 cut(s) 31, 2058
NmuCI GTSAC 3 cut(s) 274, 946, 1371
NsiI ATGCAT 2 cut(s) 1524, 2663
PaeR7I CTCGAG 1 cut(s) 146
PctI GAATGC 3 cut(s) 94, 2492, 2856
PdmI GAANNNNTTC 3 cut(s) 132, 1815, 3029
PfeI GAWTC 2 cut(s) 1658, 1724
PfoI TCCNGGA 2 cut(s) 2295, 2358
PinAI ACCGGT 1 cut(s) 1684
PkrI GCNGC 7 cut(s) 119, 165, 1144, 1796, 2313, 2340, 2376
PmeI GTTTAAAC 1 cut(s) 894
Ppu21I YACGTR 2 cut(s) 1706, 2076
PpuMI RGGWCCY 2 cut(s) 592, 1779
PshAI GACNNNNGTC 1 cut(s) 2807
PshBI ATTAAT 1 cut(s) 1983
Psp5II RGGWCCY 2 cut(s) 592, 1779
Psp6I CCWGG 3 cut(s) 336, 2295, 2358
PspEI GGTNACC 1 cut(s) 946
PspFI CCCAGC 1 cut(s) 71
PspGI CCWGG 3 cut(s) 336, 2295, 2358
PspN4I GGNNCC 4 cut(s) 593, 1284, 2104, 2419
PspPI GGNCC 9 cut(s) 340, 592, 864, 1282, 1624, 1779, 2102, 2143, 2862
PspPPI RGGWCCY 2 cut(s) 592, 1779
PspXI VCTCGAGB 1 cut(s) 146
PsuI RGATCY 3 cut(s) 712, 2128, 2459
PvuII CAGCTG 1 cut(s) 2773
RsaI GTAC 4 cut(s) 757, 1708, 2289, 2352
RsaNI GTAC 4 cut(s) 756, 1707, 2288, 2351
RseI CAYNNNNRTG 3 cut(s) 20, 995, 2972
SatI GCNGC 7 cut(s) 118, 164, 1143, 1795, 2312, 2339, 2375
Sau96I GGNCC 9 cut(s) 340, 592, 864, 1282, 1624, 1779, 2102, 2143, 2862
ScrFI CCNGG 4 cut(s) 338, 2106, 2297, 2360
SduI GDGCHC 4 cut(s) 147, 1162, 2597, 2768
SfaNI GCATC 5 cut(s) 142, 2323, 2386, 2983, 3139
SfcI CTRYAG 3 cut(s) 606, 1098, 1287
Sfr274I CTCGAG 1 cut(s) 146
SinI GGWCC 5 cut(s) 340, 592, 864, 1624, 1779
SlaI CTCGAG 1 cut(s) 146
SmiI ATTTAAAT 1 cut(s) 783
SmiMI CAYNNNNRTG 3 cut(s) 20, 995, 2972
SmlI CTYRAG 2 cut(s) 146, 473
SmoI CTYRAG 2 cut(s) 146, 473
SnaBI TACGTA 1 cut(s) 1706
SsiI CCGC 6 cut(s) 1168, 2312, 2375, 2407, 2424, 3174
SspI AATATT 1 cut(s) 519
SspMI CTAG 7 cut(s) 125, 180, 239, 816, 851, 2324, 2387
StyD4I CCNGG 4 cut(s) 336, 2104, 2295, 2358
SwaI ATTTAAAT 1 cut(s) 783
TaaI ACNGT 9 cut(s) 46, 1313, 1507, 1609, 1895, 2566, 2679, 2711, 2948
TaiI ACGT 4 cut(s) 237, 1640, 1708, 2078
TaqI TCGA 7 cut(s) 105, 147, 317, 504, 1434, 1857, 2080
TaqII GACCGA 1 cut(s) 881
TatI WGTACW 2 cut(s) 2287, 2350
TauI GCSGC 2 cut(s) 2314, 2377
TfiI GAWTC 2 cut(s) 1658, 1724
TscAI CASTG 7 cut(s) 259, 812, 1900, 1962, 2544, 2684, 3079
TseFI GTSAC 3 cut(s) 274, 946, 1371
TseI GCWGC 5 cut(s) 117, 163, 1142, 1794, 2338
Tsp45I GTSAC 3 cut(s) 274, 946, 1371
TspGWI ACGGA 4 cut(s) 1611, 1616, 2210, 2717
TspRI CASTG 7 cut(s) 259, 812, 1900, 1962, 2544, 2684, 3079
Vha464I CTTAAG 1 cut(s) 473
VpaK11BI GGWCC 5 cut(s) 340, 592, 864, 1624, 1779
VspI ATTAAT 1 cut(s) 1983
XbaI TCTAGA 5 cut(s) 124, 815, 850, 2323, 2386
XcmI CCANNNNNNNNNTGG 2 cut(s) 1332, 2663
XhoI CTCGAG 1 cut(s) 146
XmiI GTMKAC 1 cut(s) 1593
XmnI GAANNNNTTC 3 cut(s) 132, 1815, 3029
XspI CTAG 7 cut(s) 125, 180, 239, 816, 851, 2324, 2387
Zsp2I ATGCAT 2 cut(s) 1524, 2663
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.