disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 6 - 100 | 1.5e-19 | Rx N-terminal domain |
| NB-ARC | PF00931 | 189 - 366 | 3.5e-35 | NB-ARC domain |
| WHD_DRP | PF23559 | 447 - 517 | 6.8e-22 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 570 - 870 | 1.6e-35 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 578 - 625 | 3e-07 | Leucine rich repeat |
| LRR_4 | PF12799 | 592 - 631 | 5.9e-06 | Leucine Rich repeats (2 copies) |
| LRR_R13L1-DRL21 | PF25019 | 709 - 830 | 8e-27 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1089, 2352 |
| AarI | CACCTGC | 1 cut(s) | 1315 |
| Acc36I | ACCTGC | 1 cut(s) | 1315 |
| AccB1I | GGYRCC | 3 cut(s) | 950, 1303, 2082 |
| AccI | GTMKAC | 2 cut(s) | 1963, 2857 |
| AccIII | TCCGGA | 1 cut(s) | 1822 |
| AciI | CCGC | 9 cut(s) | 155, 338, 1075, 1310, 1636, 2094, 2201, 2315, 2734 |
| AclWI | GGATC | 3 cut(s) | 1627, 2384, 2470 |
| AcoI | YGGCCR | 3 cut(s) | 3, 376, 1441 |
| AcsI | RAATTY | 6 cut(s) | 439, 768, 811, 1792, 2302, 2323 |
| AcuI | CTGAAG | 4 cut(s) | 921, 2048, 2138, 2732 |
| AcyI | GRCGYC | 1 cut(s) | 951 |
| AfaI | GTAC | 5 cut(s) | 221, 304, 1714, 2033, 2699 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 647, 814, 2093, 2155, 2373, 2447, 2786 |
| AflII | CTTAAG | 1 cut(s) | 416 |
| AflIII | ACRYGT | 1 cut(s) | 58 |
| AjiI | CACGTC | 1 cut(s) | 61 |
| AjnI | CCWGG | 1 cut(s) | 2220 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 659, 691 |
| AleI | CACNNNNGTG | 1 cut(s) | 1745 |
| Alw21I | GWGCWC | 2 cut(s) | 294, 1015 |
| Alw26I | GTCTC | 1 cut(s) | 1187 |
| AlwI | GGATC | 3 cut(s) | 1627, 2384, 2470 |
| Ama87I | CYCGRG | 1 cut(s) | 1661 |
| Aor13HI | TCCGGA | 1 cut(s) | 1822 |
| AoxI | GGCC | 7 cut(s) | 3, 177, 376, 625, 678, 1441, 2816 |
| ApeKI | GCWGC | 3 cut(s) | 116, 1163, 2198 |
| ApoI | RAATTY | 6 cut(s) | 439, 768, 811, 1792, 2302, 2323 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1777, 1809 |
| AseI | ATTAAT | 1 cut(s) | 938 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 304, 1818 |
| AspLEI | GCGC | 2 cut(s) | 953, 1935 |
| AspS9I | GGNCC | 4 cut(s) | 625, 679, 1667, 2817 |
| AsuHPI | GGTGA | 9 cut(s) | 85, 985, 1118, 1637, 1732, 1847, 2171, 2208, 2216 |
| AsuII | TTCGAA | 1 cut(s) | 1412 |
| AvaI | CYCGRG | 1 cut(s) | 1661 |
| AvaII | GGWCC | 1 cut(s) | 1667 |
| BaeGI | GKGCMC | 1 cut(s) | 2087 |
| BalI | TGGCCA | 1 cut(s) | 1443 |
| BanI | GGYRCC | 3 cut(s) | 950, 1303, 2082 |
| BanII | GRGCYC | 2 cut(s) | 1015, 1620 |
| BauI | CACGAG | 1 cut(s) | 2784 |
| BbsI | GAAGAC | 4 cut(s) | 257, 674, 909, 2077 |
| Bbv12I | GWGCWC | 2 cut(s) | 294, 1015 |
| BbvCI | CCTCAGC | 1 cut(s) | 2706 |
| BbvI | GCAGC | 3 cut(s) | 103, 1150, 2185 |
| BccI | CCATC | 6 cut(s) | 220, 646, 788, 1000, 1097, 2846 |
| BceAI | ACGGC | 1 cut(s) | 2443 |
| BciT130I | CCWGG | 1 cut(s) | 2222 |
| BciVI | GTATCC | 1 cut(s) | 2163 |
| BcoDI | GTCTC | 1 cut(s) | 1187 |
| BfaI | CTAG | 4 cut(s) | 884, 1247, 1955, 2075 |
| BfoI | RGCGCY | 1 cut(s) | 954 |
| BfrI | CTTAAG | 1 cut(s) | 416 |
| BfuAI | ACCTGC | 1 cut(s) | 1315 |
| BfuI | GTATCC | 1 cut(s) | 2163 |
| BglI | GCCNNNNNGGC | 3 cut(s) | 686, 2091, 2799 |
| BisI | GCNGC | 3 cut(s) | 117, 1164, 2199 |
| BlsI | GCNGC | 3 cut(s) | 118, 1165, 2200 |
| BmcAI | AGTACT | 2 cut(s) | 304, 2033 |
| Bme1390I | CCNGG | 1 cut(s) | 2222 |
| Bme18I | GGWCC | 1 cut(s) | 1667 |
| BmeT110I | CYCGRG | 1 cut(s) | 1661 |
| BmgBI | CACGTC | 1 cut(s) | 61 |
| BmgT120I | GGNCC | 4 cut(s) | 625, 679, 1667, 2817 |
| BmiI | GGNNCC | 6 cut(s) | 626, 750, 952, 1305, 1668, 2084 |
| BmrFI | CCNGG | 1 cut(s) | 2222 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2756 |
| BpiI | GAAGAC | 4 cut(s) | 257, 674, 909, 2077 |
| BpmI | CTGGAG | 3 cut(s) | 218, 1537, 2573 |
| Bpu10I | CCTNAGC | 2 cut(s) | 513, 2706 |
| Bpu14I | TTCGAA | 1 cut(s) | 1412 |
| BpuEI | CTTGAG | 1 cut(s) | 167 |
| BsaAI | YACGTR | 1 cut(s) | 2174 |
| BsaHI | GRCGYC | 1 cut(s) | 951 |
| BsaJI | CCNNGG | 6 cut(s) | 6, 955, 1620, 1662, 2220, 2221 |
| BsaWI | WCCGGW | 1 cut(s) | 1822 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 647, 814, 2093, 2155, 2373, 2447, 2786 |
| Bse1I | ACTGG | 4 cut(s) | 42, 690, 2378, 2590 |
| Bse3DI | GCAATG | 3 cut(s) | 408, 1928, 2026 |
| BseAI | TCCGGA | 1 cut(s) | 1822 |
| BseBI | CCWGG | 1 cut(s) | 2222 |
| BseDI | CCNNGG | 6 cut(s) | 6, 955, 1620, 1662, 2220, 2221 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 647, 814, 2093, 2155, 2373, 2447, 2786 |
| BseMI | GCAATG | 3 cut(s) | 408, 1928, 2026 |
| BseMII | CTCAG | 5 cut(s) | 504, 1277, 1841, 1982, 2720 |
| BseNI | ACTGG | 4 cut(s) | 42, 690, 2378, 2590 |
| BseRI | GAGGAG | 1 cut(s) | 349 |
| BseSI | GKGCMC | 1 cut(s) | 2087 |
| BseXI | GCAGC | 3 cut(s) | 103, 1150, 2185 |
| BsgI | GTGCAG | 2 cut(s) | 2310, 2766 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2315 |
| BshFI | GGCC | 7 cut(s) | 5, 179, 378, 627, 680, 1443, 2818 |
| BshNI | GGYRCC | 3 cut(s) | 950, 1303, 2082 |
| BsiEI | CGRYCG | 1 cut(s) | 2315 |
| BsiHKAI | GWGCWC | 2 cut(s) | 294, 1015 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1661 |
| BsiSI | CCGG | 1 cut(s) | 1823 |
| BslFI | GGGAC | 2 cut(s) | 2435, 2446 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 647, 814, 2093, 2155, 2373, 2447, 2786 |
| BsmAI | GTCTC | 1 cut(s) | 1187 |
| BsmFI | GGGAC | 2 cut(s) | 2435, 2446 |
| BsmI | GAATGC | 2 cut(s) | 94, 1580 |
| BsnI | GGCC | 7 cut(s) | 5, 179, 378, 627, 680, 1443, 2818 |
| BsoBI | CYCGRG | 1 cut(s) | 1661 |
| Bsp119I | TTCGAA | 1 cut(s) | 1412 |
| Bsp1286I | GDGCHC | 4 cut(s) | 294, 1015, 1620, 2087 |
| Bsp13I | TCCGGA | 1 cut(s) | 1822 |
| Bsp19I | CCATGG | 1 cut(s) | 955 |
| BspACI | CCGC | 9 cut(s) | 155, 338, 1075, 1310, 1636, 2094, 2201, 2315, 2734 |
| BspANI | GGCC | 7 cut(s) | 5, 179, 378, 627, 680, 1443, 2818 |
| BspCNI | CTCAG | 5 cut(s) | 505, 1278, 1842, 1981, 2719 |
| BspEI | TCCGGA | 1 cut(s) | 1822 |
| BspHI | TCATGA | 1 cut(s) | 403 |
| BspLI | GGNNCC | 6 cut(s) | 626, 750, 952, 1305, 1668, 2084 |
| BspMI | ACCTGC | 1 cut(s) | 1315 |
| BspPI | GGATC | 3 cut(s) | 1627, 2384, 2470 |
| BspQI | GCTCTTC | 2 cut(s) | 282, 1809 |
| BspT104I | TTCGAA | 1 cut(s) | 1412 |
| BspT107I | GGYRCC | 3 cut(s) | 950, 1303, 2082 |
| BspTI | CTTAAG | 1 cut(s) | 416 |
| BsrDI | GCAATG | 3 cut(s) | 408, 1928, 2026 |
| BsrI | ACTGG | 4 cut(s) | 42, 690, 2378, 2590 |
| BssECI | CCNNGG | 6 cut(s) | 6, 955, 1620, 1662, 2220, 2221 |
| BssNAI | GTATAC | 1 cut(s) | 2858 |
| BssNI | GRCGYC | 1 cut(s) | 951 |
| BssSI | CACGAG | 1 cut(s) | 2784 |
| BssT1I | CCWWGG | 2 cut(s) | 955, 1620 |
| Bst1107I | GTATAC | 1 cut(s) | 2858 |
| Bst2BI | CACGAG | 1 cut(s) | 2784 |
| Bst2UI | CCWGG | 1 cut(s) | 2222 |
| Bst4CI | ACNGT | 4 cut(s) | 296, 1232, 1744, 1946 |
| Bst6I | CTCTTC | 7 cut(s) | 282, 612, 1245, 1809, 2610, 2628, 2640 |
| BstACI | GRCGYC | 1 cut(s) | 951 |
| BstAFI | CTTAAG | 1 cut(s) | 416 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 116, 1930, 2879 |
| BstBAI | YACGTR | 1 cut(s) | 2174 |
| BstBI | TTCGAA | 1 cut(s) | 1412 |
| BstC8I | GCNNGC | 2 cut(s) | 181, 1656 |
| BstDSI | CCRYGG | 1 cut(s) | 955 |
| BstEII | GGTNACC | 1 cut(s) | 973 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2784 |
| BstH2I | RGCGCY | 1 cut(s) | 954 |
| BstHHI | GCGC | 2 cut(s) | 953, 1935 |
| BstMAI | GTCTC | 1 cut(s) | 1187 |
| BstMCI | CGRYCG | 1 cut(s) | 2315 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 116, 137, 202, 686, 957, 1930, 2091, 2799, 2879 |
| BstNI | CCWGG | 1 cut(s) | 2222 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2756 |
| BstPI | GGTNACC | 1 cut(s) | 973 |
| BstSCI | CCNGG | 1 cut(s) | 2220 |
| BstSLI | GKGCMC | 1 cut(s) | 2087 |
| BstSNI | TACGTA | 1 cut(s) | 2174 |
| BstV1I | GCAGC | 3 cut(s) | 103, 1150, 2185 |
| BstV2I | GAAGAC | 4 cut(s) | 257, 674, 909, 2077 |
| BstX2I | RGATCY | 1 cut(s) | 1632 |
| BstYI | RGATCY | 1 cut(s) | 1632 |
| BstZ17I | GTATAC | 1 cut(s) | 2858 |
| BsuI | GTATCC | 1 cut(s) | 2163 |
| BsuRI | GGCC | 7 cut(s) | 5, 179, 378, 627, 680, 1443, 2818 |
| BtgI | CCRYGG | 1 cut(s) | 955 |
| BtrI | CACGTC | 1 cut(s) | 61 |
| BtsI | GCAGTG | 2 cut(s) | 2361, 2717 |
| BtsIMutI | CAGTG | 4 cut(s) | 508, 2361, 2471, 2717 |
| BveI | ACCTGC | 1 cut(s) | 1315 |
| Cac8I | GCNNGC | 2 cut(s) | 181, 1656 |
| CciI | TCATGA | 1 cut(s) | 403 |
| CfoI | GCGC | 2 cut(s) | 953, 1935 |
| Cfr13I | GGNCC | 4 cut(s) | 625, 679, 1667, 2817 |
| CseI | GACGC | 1 cut(s) | 172 |
| Csp6I | GTAC | 5 cut(s) | 220, 303, 1713, 2032, 2698 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 896, 931 |
| CviQI | GTAC | 5 cut(s) | 220, 303, 1713, 2032, 2698 |
| DinI | GGCGCC | 1 cut(s) | 952 |
| DraI | TTTAAA | 1 cut(s) | 2337 |
| EaeI | YGGCCR | 3 cut(s) | 3, 376, 1441 |
| Eam1104I | CTCTTC | 7 cut(s) | 282, 612, 1245, 1809, 2610, 2628, 2640 |
| EarI | CTCTTC | 7 cut(s) | 282, 612, 1245, 1809, 2610, 2628, 2640 |
| EciI | GGCGGA | 1 cut(s) | 1625 |
| Ecl136II | GAGCTC | 1 cut(s) | 1013 |
| Eco105I | TACGTA | 1 cut(s) | 2174 |
| Eco130I | CCWWGG | 2 cut(s) | 955, 1620 |
| Eco24I | GRGCYC | 2 cut(s) | 1015, 1620 |
| Eco47I | GGWCC | 1 cut(s) | 1667 |
| Eco53kI | GAGCTC | 1 cut(s) | 1013 |
| Eco57I | CTGAAG | 4 cut(s) | 921, 2048, 2138, 2732 |
| Eco88I | CYCGRG | 1 cut(s) | 1661 |
| Eco91I | GGTNACC | 1 cut(s) | 973 |
| EcoICRI | GAGCTC | 1 cut(s) | 1013 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2784 |
| EcoO109I | RGGNCCY | 1 cut(s) | 625 |
| EcoO65I | GGTNACC | 1 cut(s) | 973 |
| EcoRII | CCWGG | 1 cut(s) | 2220 |
| EcoT14I | CCWWGG | 2 cut(s) | 955, 1620 |
| EcoT22I | ATGCAT | 3 cut(s) | 112, 1533, 2561 |
| EcoT38I | GRGCYC | 2 cut(s) | 1015, 1620 |
| EgeI | GGCGCC | 1 cut(s) | 952 |
| EheI | GGCGCC | 1 cut(s) | 952 |
| ErhI | CCWWGG | 2 cut(s) | 955, 1620 |
| FaqI | GGGAC | 2 cut(s) | 2435, 2446 |
| FauI | CCCGC | 1 cut(s) | 2194 |
| FauNDI | CATATG | 1 cut(s) | 2487 |
| FblI | GTMKAC | 2 cut(s) | 1963, 2857 |
| Fnu4HI | GCNGC | 3 cut(s) | 117, 1164, 2199 |
| FokI | GGATG | 9 cut(s) | 164, 254, 623, 664, 830, 1115, 1402, 2304, 2819 |
| FriOI | GRGCYC | 2 cut(s) | 1015, 1620 |
| Fsp4HI | GCNGC | 3 cut(s) | 117, 1164, 2199 |
| FspBI | CTAG | 4 cut(s) | 884, 1247, 1955, 2075 |
| GlaI | GCGC | 2 cut(s) | 952, 1934 |
| GluI | GCNGC | 3 cut(s) | 117, 1164, 2199 |
| GsuI | CTGGAG | 3 cut(s) | 218, 1537, 2573 |
| HaeII | RGCGCY | 1 cut(s) | 954 |
| HaeIII | GGCC | 7 cut(s) | 5, 179, 378, 627, 680, 1443, 2818 |
| HapII | CCGG | 1 cut(s) | 1823 |
| HgaI | GACGC | 1 cut(s) | 172 |
| HhaI | GCGC | 2 cut(s) | 953, 1935 |
| Hin1I | GRCGYC | 1 cut(s) | 951 |
| Hin6I | GCGC | 2 cut(s) | 951, 1933 |
| HinP1I | GCGC | 2 cut(s) | 951, 1933 |
| HincII | GTYRAC | 1 cut(s) | 1986 |
| HindII | GTYRAC | 1 cut(s) | 1986 |
| HindIII | AAGCTT | 1 cut(s) | 711 |
| HinfI | GANTC | 8 cut(s) | 483, 545, 851, 1730, 1751, 2330, 2651, 2776 |
| HpaII | CCGG | 1 cut(s) | 1823 |
| HphI | GGTGA | 9 cut(s) | 85, 985, 1118, 1637, 1732, 1847, 2171, 2208, 2216 |
| Hpy166II | GTNNAC | 8 cut(s) | 506, 897, 1670, 1750, 1964, 1986, 2162, 2858 |
| Hpy188III | TCNNGA | 8 cut(s) | 29, 404, 614, 649, 1295, 1516, 1823, 2411 |
| Hpy8I | GTNNAC | 8 cut(s) | 506, 897, 1670, 1750, 1964, 1986, 2162, 2858 |
| Hpy99I | CGWCG | 3 cut(s) | 65, 390, 2111 |
| HpyAV | CCTTC | 6 cut(s) | 166, 328, 985, 1820, 1946, 2635 |
| HpyCH4III | ACNGT | 4 cut(s) | 296, 1232, 1744, 1946 |
| HpyCH4IV | ACGT | 4 cut(s) | 60, 841, 2173, 2540 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 116, 137, 202, 686, 957, 1930, 2091, 2799, 2879 |
| HpySE526I | ACGT | 4 cut(s) | 60, 841, 2173, 2540 |
| Hsp92I | GRCGYC | 1 cut(s) | 951 |
| HspAI | GCGC | 2 cut(s) | 951, 1933 |
| KasI | GGCGCC | 1 cut(s) | 950 |
| Kpn2I | TCCGGA | 1 cut(s) | 1822 |
| LguI | GCTCTTC | 2 cut(s) | 282, 1809 |
| LmnI | GCTCC | 5 cut(s) | 157, 748, 1010, 1018, 1243 |
| Lsp1109I | GCAGC | 3 cut(s) | 103, 1150, 2185 |
| MaeI | CTAG | 4 cut(s) | 884, 1247, 1955, 2075 |
| MaeII | ACGT | 4 cut(s) | 60, 841, 2173, 2540 |
| MaeIII | GTNAC | 5 cut(s) | 46, 313, 973, 1190, 1392 |
| MfeI | CAATTG | 1 cut(s) | 2246 |
| MflI | RGATCY | 1 cut(s) | 1632 |
| MhlI | GDGCHC | 4 cut(s) | 294, 1015, 1620, 2087 |
| MlsI | TGGCCA | 1 cut(s) | 1443 |
| MluNI | TGGCCA | 1 cut(s) | 1443 |
| Mly113I | GGCGCC | 1 cut(s) | 951 |
| MlyI | GAGTC | 2 cut(s) | 1745, 2770 |
| MmeI | TCCRAC | 7 cut(s) | 368, 804, 1092, 1297, 1928, 2488, 2798 |
| Mox20I | TGGCCA | 1 cut(s) | 1443 |
| Mph1103I | ATGCAT | 3 cut(s) | 112, 1533, 2561 |
| MroI | TCCGGA | 1 cut(s) | 1822 |
| MroXI | GAANNNNTTC | 2 cut(s) | 304, 1818 |
| MscI | TGGCCA | 1 cut(s) | 1443 |
| MslI | CAYNNNNRTG | 6 cut(s) | 20, 1675, 1745, 2004, 2490, 2554 |
| Msp20I | TGGCCA | 1 cut(s) | 1443 |
| MspA1I | CMGCKG | 1 cut(s) | 1695 |
| MspCI | CTTAAG | 1 cut(s) | 416 |
| MspI | CCGG | 1 cut(s) | 1823 |
| MspR9I | CCNGG | 1 cut(s) | 2222 |
| MunI | CAATTG | 1 cut(s) | 2246 |
| Mva1269I | GAATGC | 2 cut(s) | 94, 1580 |
| MvaI | CCWGG | 1 cut(s) | 2222 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 116, 137, 202, 686, 957, 1930, 2091, 2799, 2879 |
| NarI | GGCGCC | 1 cut(s) | 951 |
| NcoI | CCATGG | 1 cut(s) | 955 |
| NdeI | CATATG | 1 cut(s) | 2487 |
| NlaIV | GGNNCC | 6 cut(s) | 626, 750, 952, 1305, 1668, 2084 |
| NmeAIII | GCCGAG | 1 cut(s) | 31 |
| NmuCI | GTSAC | 2 cut(s) | 973, 1392 |
| NsiI | ATGCAT | 3 cut(s) | 112, 1533, 2561 |
| NspV | TTCGAA | 1 cut(s) | 1412 |
| OliI | CACNNNNGTG | 1 cut(s) | 1745 |
| PagI | TCATGA | 1 cut(s) | 403 |
| PaqCI | CACCTGC | 1 cut(s) | 1315 |
| PasI | CCCWGGG | 1 cut(s) | 2221 |
| PciSI | GCTCTTC | 2 cut(s) | 282, 1809 |
| PctI | GAATGC | 2 cut(s) | 94, 1580 |
| PdmI | GAANNNNTTC | 2 cut(s) | 304, 1818 |
| PfeI | GAWTC | 6 cut(s) | 483, 545, 851, 1730, 2330, 2651 |
| PkrI | GCNGC | 3 cut(s) | 118, 1165, 2200 |
| PleI | GAGTC | 2 cut(s) | 1745, 2770 |
| PluTI | GGCGCC | 1 cut(s) | 954 |
| PpsI | GAGTC | 2 cut(s) | 1745, 2770 |
| Ppu21I | YACGTR | 1 cut(s) | 2174 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2756 |
| PshBI | ATTAAT | 1 cut(s) | 938 |
| PsiI | TTATAA | 2 cut(s) | 1089, 2352 |
| Psp124BI | GAGCTC | 1 cut(s) | 1015 |
| Psp6I | CCWGG | 1 cut(s) | 2220 |
| PspEI | GGTNACC | 1 cut(s) | 973 |
| PspGI | CCWGG | 1 cut(s) | 2220 |
| PspN4I | GGNNCC | 6 cut(s) | 626, 750, 952, 1305, 1668, 2084 |
| PspPI | GGNCC | 4 cut(s) | 625, 679, 1667, 2817 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2154, 2186 |
| PsuI | RGATCY | 1 cut(s) | 1632 |
| PvuII | CAGCTG | 1 cut(s) | 1695 |
| RsaI | GTAC | 5 cut(s) | 221, 304, 1714, 2033, 2699 |
| RsaNI | GTAC | 5 cut(s) | 220, 303, 1713, 2032, 2698 |
| RseI | CAYNNNNRTG | 6 cut(s) | 20, 1675, 1745, 2004, 2490, 2554 |
| SacI | GAGCTC | 1 cut(s) | 1015 |
| SapI | GCTCTTC | 2 cut(s) | 282, 1809 |
| SatI | GCNGC | 3 cut(s) | 117, 1164, 2199 |
| Sau96I | GGNCC | 4 cut(s) | 625, 679, 1667, 2817 |
| ScaI | AGTACT | 2 cut(s) | 304, 2033 |
| SchI | GAGTC | 2 cut(s) | 1745, 2770 |
| ScrFI | CCNGG | 1 cut(s) | 2222 |
| SduI | GDGCHC | 4 cut(s) | 294, 1015, 1620, 2087 |
| SfoI | GGCGCC | 1 cut(s) | 952 |
| SfuI | TTCGAA | 1 cut(s) | 1412 |
| SinI | GGWCC | 1 cut(s) | 1667 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 20, 1675, 1745, 2004, 2490, 2554 |
| SmlI | CTYRAG | 2 cut(s) | 146, 416 |
| SmoI | CTYRAG | 2 cut(s) | 146, 416 |
| SnaBI | TACGTA | 1 cut(s) | 2174 |
| SsiI | CCGC | 9 cut(s) | 155, 338, 1075, 1310, 1636, 2094, 2201, 2315, 2734 |
| SspDI | GGCGCC | 1 cut(s) | 950 |
| SspI | AATATT | 3 cut(s) | 969, 1068, 2417 |
| SspMI | CTAG | 4 cut(s) | 884, 1247, 1955, 2075 |
| SstI | GAGCTC | 1 cut(s) | 1015 |
| StyD4I | CCNGG | 1 cut(s) | 2220 |
| StyI | CCWWGG | 2 cut(s) | 955, 1620 |
| TaaI | ACNGT | 4 cut(s) | 296, 1232, 1744, 1946 |
| TaiI | ACGT | 4 cut(s) | 63, 844, 2176, 2543 |
| TaqI | TCGA | 6 cut(s) | 30, 63, 481, 982, 1412, 2466 |
| TatI | WGTACW | 2 cut(s) | 302, 2031 |
| TfiI | GAWTC | 6 cut(s) | 483, 545, 851, 1730, 2330, 2651 |
| TscAI | CASTG | 4 cut(s) | 508, 2368, 2478, 2724 |
| TseFI | GTSAC | 2 cut(s) | 973, 1392 |
| TseI | GCWGC | 3 cut(s) | 116, 1163, 2198 |
| Tsp45I | GTSAC | 2 cut(s) | 973, 1392 |
| TspDTI | ATGAA | 9 cut(s) | 297, 450, 558, 714, 1587, 1846, 2127, 2474, 2504 |
| TspGWI | ACGGA | 2 cut(s) | 10, 374 |
| TspRI | CASTG | 4 cut(s) | 508, 2368, 2478, 2724 |
| Vha464I | CTTAAG | 1 cut(s) | 416 |
| VpaK11BI | GGWCC | 1 cut(s) | 1667 |
| VspI | ATTAAT | 1 cut(s) | 938 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2784 |
| XapI | RAATTY | 6 cut(s) | 439, 768, 811, 1792, 2302, 2323 |
| XmiI | GTMKAC | 2 cut(s) | 1963, 2857 |
| XmnI | GAANNNNTTC | 2 cut(s) | 304, 1818 |
| XspI | CTAG | 4 cut(s) | 884, 1247, 1955, 2075 |
| ZrmI | AGTACT | 2 cut(s) | 304, 2033 |
| Zsp2I | ATGCAT | 3 cut(s) | 112, 1533, 2561 |