disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 6 - 95 | 9.9e-21 | Rx N-terminal domain |
| NB-ARC | PF00931 | 180 - 351 | 9.5e-33 | NB-ARC domain |
| WHD_DRP | PF23559 | 437 - 509 | 1.4e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 561 - 893 | 5e-29 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 700 - 821 | 7.6e-24 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 441, 666 |
| Acc16I | TGCGCA | 1 cut(s) | 1160 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 196, 229, 2748 |
| AccI | GTMKAC | 2 cut(s) | 1722, 1898 |
| AciI | CCGC | 2 cut(s) | 2194, 2288 |
| AclI | AACGTT | 1 cut(s) | 2770 |
| AclWI | GGATC | 3 cut(s) | 420, 798, 810 |
| AcoI | YGGCCR | 2 cut(s) | 361, 2339 |
| AcsI | RAATTY | 5 cut(s) | 110, 1765, 1777, 1852, 2406 |
| AcuI | CTGAAG | 4 cut(s) | 227, 1647, 2108, 2582 |
| AcvI | CACGTG | 1 cut(s) | 988 |
| AfaI | GTAC | 5 cut(s) | 59, 221, 1687, 2006, 2265 |
| AfeI | AGCGCT | 1 cut(s) | 2600 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 196, 229, 620, 825, 2125, 2420, 2748 |
| AhlI | ACTAGT | 2 cut(s) | 581, 1727 |
| AjnI | CCWGG | 1 cut(s) | 2336 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1236, 1268 |
| AleI | CACNNNNGTG | 1 cut(s) | 1707 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2315, 2347 |
| Alw21I | GWGCWC | 2 cut(s) | 189, 1172 |
| Alw26I | GTCTC | 3 cut(s) | 259, 1776, 1819 |
| Alw44I | GTGCAC | 1 cut(s) | 185 |
| AlwI | GGATC | 3 cut(s) | 420, 798, 810 |
| Aor51HI | AGCGCT | 1 cut(s) | 2600 |
| AoxI | GGCC | 4 cut(s) | 177, 361, 2339, 2789 |
| ApaLI | GTGCAC | 1 cut(s) | 185 |
| ApeKI | GCWGC | 2 cut(s) | 1917, 2169 |
| ApoI | RAATTY | 5 cut(s) | 110, 1765, 1777, 1852, 2406 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1750, 1782 |
| AseI | ATTAAT | 1 cut(s) | 2913 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2088 |
| AspLEI | GCGC | 3 cut(s) | 13, 1161, 2601 |
| AspS9I | GGNCC | 3 cut(s) | 861, 1273, 2790 |
| AsuHPI | GGTGA | 7 cut(s) | 85, 583, 773, 1528, 2192, 2498, 2867 |
| AsuII | TTCGAA | 1 cut(s) | 779 |
| AvaII | GGWCC | 2 cut(s) | 861, 1273 |
| BaeGI | GKGCMC | 1 cut(s) | 189 |
| BanII | GRGCYC | 1 cut(s) | 603 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 822, 854 |
| BbrPI | CACGTG | 1 cut(s) | 988 |
| Bbv12I | GWGCWC | 2 cut(s) | 189, 1172 |
| BbvI | GCAGC | 2 cut(s) | 1904, 2181 |
| BccI | CCATC | 6 cut(s) | 220, 619, 863, 1354, 2159, 2312 |
| BceAI | ACGGC | 1 cut(s) | 1641 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2807, 2841 |
| BciT130I | CCWGG | 1 cut(s) | 2338 |
| BclI | TGATCA | 3 cut(s) | 990, 1347, 2509 |
| BcoDI | GTCTC | 3 cut(s) | 259, 1776, 1819 |
| BcuI | ACTAGT | 2 cut(s) | 581, 1727 |
| BfaI | CTAG | 8 cut(s) | 29, 239, 582, 659, 813, 1383, 1728, 2693 |
| BfmI | CTRYAG | 2 cut(s) | 2384, 2729 |
| BfoI | RGCGCY | 1 cut(s) | 2602 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 369 |
| BglII | AGATCT | 1 cut(s) | 2101 |
| BisI | GCNGC | 2 cut(s) | 1918, 2170 |
| BlsI | GCNGC | 2 cut(s) | 1919, 2171 |
| BmcAI | AGTACT | 1 cut(s) | 2006 |
| Bme1390I | CCNGG | 1 cut(s) | 2338 |
| Bme18I | GGWCC | 2 cut(s) | 861, 1273 |
| BmgT120I | GGNCC | 3 cut(s) | 861, 1273, 2790 |
| BmiI | GGNNCC | 2 cut(s) | 602, 2332 |
| BmrFI | CCNGG | 1 cut(s) | 2338 |
| BmsI | GCATC | 6 cut(s) | 142, 661, 754, 894, 1146, 1981 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2055 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1454, 1486 |
| BpmI | CTGGAG | 1 cut(s) | 2204 |
| Bpu10I | CCTNAGC | 1 cut(s) | 918 |
| Bpu14I | TTCGAA | 1 cut(s) | 779 |
| BpuEI | CTTGAG | 3 cut(s) | 167, 757, 1690 |
| BsaAI | YACGTR | 4 cut(s) | 61, 988, 1685, 2452 |
| BsaJI | CCNNGG | 1 cut(s) | 1902 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2315, 2345 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 196, 229, 620, 825, 2125, 2420, 2748 |
| Bse118I | RCCGGY | 1 cut(s) | 2833 |
| Bse1I | ACTGG | 3 cut(s) | 197, 1483, 2052 |
| BseBI | CCWGG | 1 cut(s) | 2338 |
| BseDI | CCNNGG | 1 cut(s) | 1902 |
| BseGI | GGATG | 9 cut(s) | 157, 238, 630, 856, 1345, 1365, 2355, 2534, 2805 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 196, 229, 620, 825, 2125, 2420, 2748 |
| BseMII | CTCAG | 5 cut(s) | 254, 423, 513, 1065, 2096 |
| BseNI | ACTGG | 3 cut(s) | 197, 1483, 2052 |
| BseRI | GAGGAG | 4 cut(s) | 593, 760, 2406, 2798 |
| BseSI | GKGCMC | 1 cut(s) | 189 |
| BseXI | GCAGC | 2 cut(s) | 1904, 2181 |
| BseYI | CCCAGC | 2 cut(s) | 116, 2601 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2288 |
| BshFI | GGCC | 4 cut(s) | 179, 363, 2341, 2791 |
| BsiEI | CGRYCG | 1 cut(s) | 2288 |
| BsiHKAI | GWGCWC | 2 cut(s) | 189, 1172 |
| BsiSI | CCGG | 1 cut(s) | 2834 |
| BsiWI | CGTACG | 1 cut(s) | 1685 |
| BslFI | GGGAC | 1 cut(s) | 2210 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 196, 229, 620, 825, 2125, 2420, 2748 |
| BsmAI | GTCTC | 3 cut(s) | 259, 1776, 1819 |
| BsmFI | GGGAC | 1 cut(s) | 2210 |
| BsnI | GGCC | 4 cut(s) | 179, 363, 2341, 2791 |
| Bsp119I | TTCGAA | 1 cut(s) | 779 |
| Bsp1286I | GDGCHC | 3 cut(s) | 189, 603, 1172 |
| Bsp143I | GATC | 8 cut(s) | 412, 790, 815, 990, 1347, 2101, 2296, 2509 |
| BspACI | CCGC | 2 cut(s) | 2194, 2288 |
| BspANI | GGCC | 4 cut(s) | 179, 363, 2341, 2791 |
| BspCNI | CTCAG | 5 cut(s) | 255, 424, 514, 1066, 2097 |
| BspHI | TCATGA | 1 cut(s) | 388 |
| BspLI | GGNNCC | 2 cut(s) | 602, 2332 |
| BspMAI | CTGCAG | 1 cut(s) | 2733 |
| BspPI | GGATC | 3 cut(s) | 420, 798, 810 |
| BspT104I | TTCGAA | 1 cut(s) | 779 |
| BsrFI | RCCGGY | 1 cut(s) | 2833 |
| BsrI | ACTGG | 3 cut(s) | 197, 1483, 2052 |
| BssAI | RCCGGY | 1 cut(s) | 2833 |
| BssECI | CCNNGG | 1 cut(s) | 1902 |
| BssMI | GATC | 8 cut(s) | 412, 790, 815, 990, 1347, 2101, 2296, 2509 |
| BssNAI | GTATAC | 1 cut(s) | 1899 |
| BssT1I | CCWWGG | 1 cut(s) | 1902 |
| Bst1107I | GTATAC | 1 cut(s) | 1899 |
| Bst2UI | CCWGG | 1 cut(s) | 2338 |
| Bst4CI | ACNGT | 2 cut(s) | 1443, 1640 |
| Bst6I | CTCTTC | 2 cut(s) | 1666, 1794 |
| BstBAI | YACGTR | 4 cut(s) | 61, 988, 1685, 2452 |
| BstBI | TTCGAA | 1 cut(s) | 779 |
| BstC8I | GCNNGC | 1 cut(s) | 39 |
| BstDEI | CTNAG | 9 cut(s) | 263, 432, 522, 799, 918, 1074, 1256, 1754, 2105 |
| BstEII | GGTNACC | 1 cut(s) | 937 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 618 |
| BstF5I | GGATG | 9 cut(s) | 157, 238, 630, 856, 1345, 1365, 2355, 2534, 2805 |
| BstH2I | RGCGCY | 1 cut(s) | 2602 |
| BstHHI | GCGC | 3 cut(s) | 13, 1161, 2601 |
| BstKTI | GATC | 8 cut(s) | 415, 793, 818, 993, 1350, 2104, 2299, 2512 |
| BstMAI | GTCTC | 3 cut(s) | 259, 1776, 1819 |
| BstMBI | GATC | 8 cut(s) | 412, 790, 815, 990, 1347, 2101, 2296, 2509 |
| BstMCI | CGRYCG | 1 cut(s) | 2288 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 47, 137, 193, 369, 659, 1167, 1608, 2607 |
| BstNI | CCWGG | 1 cut(s) | 2338 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2055 |
| BstPI | GGTNACC | 1 cut(s) | 937 |
| BstSCI | CCNGG | 1 cut(s) | 2336 |
| BstSFI | CTRYAG | 2 cut(s) | 2384, 2729 |
| BstSLI | GKGCMC | 1 cut(s) | 189 |
| BstSNI | TACGTA | 3 cut(s) | 61, 1685, 2452 |
| BstV1I | GCAGC | 2 cut(s) | 1904, 2181 |
| BstX2I | RGATCY | 3 cut(s) | 412, 815, 2101 |
| BstYI | RGATCY | 3 cut(s) | 412, 815, 2101 |
| BstZ17I | GTATAC | 1 cut(s) | 1899 |
| BsuRI | GGCC | 4 cut(s) | 179, 363, 2341, 2791 |
| BtsCI | GGATG | 9 cut(s) | 157, 238, 630, 856, 1345, 1365, 2355, 2534, 2805 |
| BtsI | GCAGTG | 3 cut(s) | 2699, 2726, 2870 |
| BtsIMutI | CAGTG | 8 cut(s) | 190, 252, 471, 1476, 2045, 2699, 2726, 2870 |
| Cac8I | GCNNGC | 1 cut(s) | 39 |
| CciI | TCATGA | 1 cut(s) | 388 |
| CfoI | GCGC | 3 cut(s) | 13, 1161, 2601 |
| Cfr10I | RCCGGY | 1 cut(s) | 2833 |
| Cfr13I | GGNCC | 3 cut(s) | 861, 1273, 2790 |
| Csp6I | GTAC | 5 cut(s) | 58, 220, 1686, 2005, 2264 |
| CviQI | GTAC | 5 cut(s) | 58, 220, 1686, 2005, 2264 |
| DdeI | CTNAG | 9 cut(s) | 263, 432, 522, 799, 918, 1074, 1256, 1754, 2105 |
| DpnI | GATC | 8 cut(s) | 414, 792, 817, 992, 1349, 2103, 2298, 2511 |
| DpnII | GATC | 8 cut(s) | 412, 790, 815, 990, 1347, 2101, 2296, 2509 |
| DraI | TTTAAA | 1 cut(s) | 2361 |
| EaeI | YGGCCR | 2 cut(s) | 361, 2339 |
| Eam1104I | CTCTTC | 2 cut(s) | 1666, 1794 |
| EarI | CTCTTC | 2 cut(s) | 1666, 1794 |
| Eco105I | TACGTA | 3 cut(s) | 61, 1685, 2452 |
| Eco130I | CCWWGG | 1 cut(s) | 1902 |
| Eco24I | GRGCYC | 1 cut(s) | 603 |
| Eco32I | GATATC | 1 cut(s) | 1090 |
| Eco47I | GGWCC | 2 cut(s) | 861, 1273 |
| Eco47III | AGCGCT | 1 cut(s) | 2600 |
| Eco57I | CTGAAG | 4 cut(s) | 227, 1647, 2108, 2582 |
| Eco72I | CACGTG | 1 cut(s) | 988 |
| Eco91I | GGTNACC | 1 cut(s) | 937 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 618 |
| EcoO65I | GGTNACC | 1 cut(s) | 937 |
| EcoRI | GAATTC | 1 cut(s) | 110 |
| EcoRII | CCWGG | 1 cut(s) | 2336 |
| EcoRV | GATATC | 1 cut(s) | 1090 |
| EcoT14I | CCWWGG | 1 cut(s) | 1902 |
| EcoT22I | ATGCAT | 1 cut(s) | 1506 |
| EcoT38I | GRGCYC | 1 cut(s) | 603 |
| ErhI | CCWWGG | 1 cut(s) | 1902 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 129, 161, 1359, 1391, 2416, 2448 |
| FaqI | GGGAC | 1 cut(s) | 2210 |
| FauI | CCCGC | 1 cut(s) | 2187 |
| FbaI | TGATCA | 3 cut(s) | 990, 1347, 2509 |
| FblI | GTMKAC | 2 cut(s) | 1722, 1898 |
| Fnu4HI | GCNGC | 2 cut(s) | 1918, 2170 |
| FokI | GGATG | 9 cut(s) | 164, 245, 637, 863, 1352, 1372, 2362, 2521, 2792 |
| FriOI | GRGCYC | 1 cut(s) | 603 |
| Fsp4HI | GCNGC | 2 cut(s) | 1918, 2170 |
| FspBI | CTAG | 8 cut(s) | 29, 239, 582, 659, 813, 1383, 1728, 2693 |
| FspI | TGCGCA | 1 cut(s) | 1160 |
| GlaI | GCGC | 3 cut(s) | 12, 1160, 2600 |
| GluI | GCNGC | 2 cut(s) | 1918, 2170 |
| GsaI | CCCAGC | 2 cut(s) | 120, 2605 |
| GsuI | CTGGAG | 1 cut(s) | 2204 |
| HaeII | RGCGCY | 1 cut(s) | 2602 |
| HaeIII | GGCC | 4 cut(s) | 179, 363, 2341, 2791 |
| HapII | CCGG | 1 cut(s) | 2834 |
| HhaI | GCGC | 3 cut(s) | 13, 1161, 2601 |
| Hin6I | GCGC | 3 cut(s) | 11, 1159, 2599 |
| HinP1I | GCGC | 3 cut(s) | 11, 1159, 2599 |
| HindIII | AAGCTT | 2 cut(s) | 1644, 1963 |
| HinfI | GANTC | 8 cut(s) | 121, 366, 883, 1070, 1846, 2303, 2373, 2633 |
| HpaII | CCGG | 1 cut(s) | 2834 |
| HphI | GGTGA | 7 cut(s) | 85, 583, 773, 1528, 2192, 2498, 2867 |
| Hpy166II | GTNNAC | 4 cut(s) | 187, 861, 1723, 1899 |
| Hpy188I | TCNGA | 9 cut(s) | 264, 523, 721, 1075, 1197, 1474, 1914, 2106, 2757 |
| Hpy188III | TCNNGA | 7 cut(s) | 389, 536, 813, 1383, 2300, 2637, 2693 |
| Hpy8I | GTNNAC | 4 cut(s) | 187, 861, 1723, 1899 |
| HpyAV | CCTTC | 9 cut(s) | 166, 202, 287, 316, 584, 1537, 2132, 2532, 2600 |
| HpyCH4III | ACNGT | 2 cut(s) | 1443, 1640 |
| HpyCH4IV | ACGT | 7 cut(s) | 60, 183, 987, 1684, 2451, 2770, 2843 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 47, 137, 193, 369, 659, 1167, 1608, 2607 |
| HpyF3I | CTNAG | 9 cut(s) | 263, 432, 522, 799, 918, 1074, 1256, 1754, 2105 |
| HpySE526I | ACGT | 7 cut(s) | 60, 183, 987, 1684, 2451, 2770, 2843 |
| HspAI | GCGC | 3 cut(s) | 11, 1159, 2599 |
| Ksp22I | TGATCA | 3 cut(s) | 990, 1347, 2509 |
| Kzo9I | GATC | 8 cut(s) | 412, 790, 815, 990, 1347, 2101, 2296, 2509 |
| LmnI | GCTCC | 5 cut(s) | 316, 606, 1228, 1914, 2336 |
| Lsp1109I | GCAGC | 2 cut(s) | 1904, 2181 |
| LweI | GCATC | 6 cut(s) | 142, 661, 754, 894, 1146, 1981 |
| MaeI | CTAG | 8 cut(s) | 29, 239, 582, 659, 813, 1383, 1728, 2693 |
| MaeII | ACGT | 7 cut(s) | 60, 183, 987, 1684, 2451, 2770, 2843 |
| MaeIII | GTNAC | 2 cut(s) | 937, 1412 |
| MalI | GATC | 8 cut(s) | 414, 792, 817, 992, 1349, 2103, 2298, 2511 |
| MboI | GATC | 8 cut(s) | 412, 790, 815, 990, 1347, 2101, 2296, 2509 |
| MfeI | CAATTG | 2 cut(s) | 1669, 2189 |
| MflI | RGATCY | 3 cut(s) | 412, 815, 2101 |
| MhlI | GDGCHC | 3 cut(s) | 189, 603, 1172 |
| MlyI | GAGTC | 3 cut(s) | 375, 1079, 1855 |
| MmeI | TCCRAC | 5 cut(s) | 768, 828, 1267, 2077, 2230 |
| Mph1103I | ATGCAT | 1 cut(s) | 1506 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2088 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1707, 2853 |
| MspI | CCGG | 1 cut(s) | 2834 |
| MspR9I | CCNGG | 1 cut(s) | 2338 |
| MunI | CAATTG | 2 cut(s) | 1669, 2189 |
| MvaI | CCWGG | 1 cut(s) | 2338 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 47, 137, 193, 369, 659, 1167, 1608, 2607 |
| NdeII | GATC | 8 cut(s) | 412, 790, 815, 990, 1347, 2101, 2296, 2509 |
| NlaIV | GGNNCC | 2 cut(s) | 602, 2332 |
| NmeAIII | GCCGAG | 1 cut(s) | 389 |
| NmuCI | GTSAC | 1 cut(s) | 1412 |
| NsbI | TGCGCA | 1 cut(s) | 1160 |
| NsiI | ATGCAT | 1 cut(s) | 1506 |
| NspV | TTCGAA | 1 cut(s) | 779 |
| OliI | CACNNNNGTG | 1 cut(s) | 1707 |
| PagI | TCATGA | 1 cut(s) | 388 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 66 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2088 |
| PfeI | GAWTC | 5 cut(s) | 121, 883, 2303, 2373, 2633 |
| Pfl23II | CGTACG | 1 cut(s) | 1685 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 196, 229, 2748 |
| PkrI | GCNGC | 2 cut(s) | 1919, 2171 |
| PleI | GAGTC | 3 cut(s) | 374, 1078, 1854 |
| PmaCI | CACGTG | 1 cut(s) | 988 |
| PmlI | CACGTG | 1 cut(s) | 988 |
| PpsI | GAGTC | 3 cut(s) | 374, 1078, 1854 |
| Ppu21I | YACGTR | 4 cut(s) | 61, 988, 1685, 2452 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2055 |
| PshBI | ATTAAT | 1 cut(s) | 2913 |
| PsiI | TTATAA | 2 cut(s) | 441, 666 |
| Psp1406I | AACGTT | 1 cut(s) | 2770 |
| Psp6I | CCWGG | 1 cut(s) | 2336 |
| PspCI | CACGTG | 1 cut(s) | 988 |
| PspEI | GGTNACC | 1 cut(s) | 937 |
| PspFI | CCCAGC | 2 cut(s) | 116, 2601 |
| PspGI | CCWGG | 1 cut(s) | 2336 |
| PspLI | CGTACG | 1 cut(s) | 1685 |
| PspN4I | GGNNCC | 2 cut(s) | 602, 2332 |
| PspPI | GGNCC | 3 cut(s) | 861, 1273, 2790 |
| PstI | CTGCAG | 1 cut(s) | 2733 |
| PsuI | RGATCY | 3 cut(s) | 412, 815, 2101 |
| RsaI | GTAC | 5 cut(s) | 59, 221, 1687, 2006, 2265 |
| RsaNI | GTAC | 5 cut(s) | 58, 220, 1686, 2005, 2264 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1707, 2853 |
| SatI | GCNGC | 2 cut(s) | 1918, 2170 |
| Sau3AI | GATC | 8 cut(s) | 412, 790, 815, 990, 1347, 2101, 2296, 2509 |
| Sau96I | GGNCC | 3 cut(s) | 861, 1273, 2790 |
| ScaI | AGTACT | 1 cut(s) | 2006 |
| SchI | GAGTC | 3 cut(s) | 375, 1079, 1855 |
| ScrFI | CCNGG | 1 cut(s) | 2338 |
| SduI | GDGCHC | 3 cut(s) | 189, 603, 1172 |
| SfaNI | GCATC | 6 cut(s) | 142, 661, 754, 894, 1146, 1981 |
| SfcI | CTRYAG | 2 cut(s) | 2384, 2729 |
| SfuI | TTCGAA | 1 cut(s) | 779 |
| SinI | GGWCC | 2 cut(s) | 861, 1273 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1707, 2853 |
| SmlI | CTYRAG | 3 cut(s) | 146, 772, 1705 |
| SmoI | CTYRAG | 3 cut(s) | 146, 772, 1705 |
| SnaBI | TACGTA | 3 cut(s) | 61, 1685, 2452 |
| SpeI | ACTAGT | 2 cut(s) | 581, 1727 |
| SsiI | CCGC | 2 cut(s) | 2194, 2288 |
| SspI | AATATT | 3 cut(s) | 933, 2148, 2547 |
| SspMI | CTAG | 8 cut(s) | 29, 239, 582, 659, 813, 1383, 1728, 2693 |
| StyD4I | CCNGG | 1 cut(s) | 2336 |
| StyI | CCWWGG | 1 cut(s) | 1902 |
| TaaI | ACNGT | 2 cut(s) | 1443, 1640 |
| TaiI | ACGT | 7 cut(s) | 63, 186, 990, 1687, 2454, 2773, 2846 |
| TaqI | TCGA | 5 cut(s) | 513, 535, 729, 779, 2817 |
| TaqII | GACCGA | 2 cut(s) | 878, 1290 |
| TatI | WGTACW | 1 cut(s) | 2004 |
| TfiI | GAWTC | 5 cut(s) | 121, 883, 2303, 2373, 2633 |
| TscAI | CASTG | 8 cut(s) | 197, 259, 478, 1483, 2052, 2706, 2733, 2870 |
| TseFI | GTSAC | 1 cut(s) | 1412 |
| TseI | GCWGC | 2 cut(s) | 1917, 2169 |
| Tsp45I | GTSAC | 1 cut(s) | 1412 |
| TspGWI | ACGGA | 1 cut(s) | 1574 |
| TspRI | CASTG | 8 cut(s) | 197, 259, 478, 1483, 2052, 2706, 2733, 2870 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 196, 229, 2748 |
| VneI | GTGCAC | 1 cut(s) | 185 |
| VpaK11BI | GGWCC | 2 cut(s) | 861, 1273 |
| VspI | ATTAAT | 1 cut(s) | 2913 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 618 |
| XapI | RAATTY | 5 cut(s) | 110, 1765, 1777, 1852, 2406 |
| XbaI | TCTAGA | 3 cut(s) | 812, 1382, 2692 |
| XmiI | GTMKAC | 2 cut(s) | 1722, 1898 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2088 |
| XspI | CTAG | 8 cut(s) | 29, 239, 582, 659, 813, 1383, 1728, 2693 |
| ZrmI | AGTACT | 1 cut(s) | 2006 |
| Zsp2I | ATGCAT | 1 cut(s) | 1506 |