pycom11g05380

disease resistance protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
4128566 .. 4130747
2182 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g05380.1

Sequence Viewer

Length: 2097 bp
ATGTCAGGATCCATTAAGGGGGTAAAGTTTCTTCTTGTGTTGGATGATGTGTGGACCGAAGACAGCAAAAAGTGGGATCAATTAAAGATTCCATTGATGCAAAATGGGGCTGAGGGCAGTAGAATACTAGTAACCACGCGAAAACGAAATGTTGCTAGTATGATGAGAGCAACCTCTCACATGATCAATCTTGTAGAGTTGAGTGACGAGAATTGTTTGTTGATCTTCAATCACATGGCATTTTCTAATAGAGAAGTAGACGAGTCTGAGGTGTTTGGAGATATCAGTAGGGAAATTGTAAAAAAGTGCAAGGGTTTGCCACTTGTTGCAAGGACTTTAGGTAGTATGATGAGCGATAAGAGAAAAAGGAGTGAGTGGTTGGACGTTCTGAAAAGTAAAATATGGGATTGGGAAGAAGTGGAGCAAGAAGTTTTCCAGCCATTATTTCTAAGTTACTATGATTTGGCCCCAAGAAATAGATGTTGCCTTCTATATTGTGCTATTTTCCCAAAAGATTATAAGTTTAGTAGGGATGAGTTGATTAATCTTTGGATGGCACAAGATTATCTTAATTCCAGGGAGAATAAAGATAAAGGAAAAATTGGTCAAACTGTTTTTGATAATTTAGTTGCGCGGTCTTTTTTTCAAGATTTTGAGAAACACCGTGACACTGGTGCAATAAGAGGTTGTAAAATGCACGACATTATACATGATTTTGTGCAATTTATCACCAAGAAGGACAGTTTGATTACGGAGGCTGAGGGTGCAAACCGTAAAATAGAGGAACTGGGCAGTAATCTTCGCCATTTGAACTTAACGTTTGAAGGAGTTGTACTTCCTATCACTTCTGGCAATTGCAAAAGTCTACGAACGCTGATAGCAATTCATTCAGGTGTTGCTAGGGTAGACGCTAGTTTTATTTTAGAATTTAAGTGTCTTAGGACGATAAATTTGTCTAGAAATTCCATGGGTGTACTCCCAAAGGAGATTGGTGAATTGGTACATTTGAGACATGTTGATTTGTCTTGGAGTCCAAATTTGGGGAAATTACCAGACGCCGTTTGTGGTTTATACAATTTGTATACCTTGGACCTTCGGGGATGCAGGGCACTTGAAAAATTGCCTGATAGCATGGGAAAGTTGATTAGCTTAAAGCATCTTTACATTGATGGGTGTCGCTCATTGAAGTACTTGCCAAAAGGGATAGGGAGATTAACAAGTTTGCAAACACTAGACGTGTGTCCTCTGTTTTCGGTTGACAACGACGAAGCATTTCAAGCTGGGGATTTGGGAAGTCTGAACCAGCTCCAGGGCAGTCTCAGAATAAGAATTTTGGGGAAGGTGAAAGACGGGAGTGGAGCACAATTGCGGGACAACAAGCAACTTTTTCATCTCCAACTTGATTTTGGTGAAGTGAACGAGGAGCCTGGAGAGACCAGTGTACAAATAATGAATGTCTTACGACCACATGATAATCTGGAATCTTTAGAGATTTGTGGGTATTCTGGCTCGACCTGGCCGAATTGGTTGGTGTCTTTAAACGAGTTGCGATTCCTTACTCTGCGGGGGAATAAGGGTTGTGAAATTTTGCCTCCTCTTGGAAGATTGCCGTTCCTTGAAAAGCTGTACGTAGGGAAGATGCTGGGTGTAAGAAAGGTTGGTGGTGAGTTTTTGGGAGTAGAAGATGATGATCAAACATCTTCTTCGTTCAAATCATCCTCATCAATATTATTCCCCAAACTGAAGCAACTCGAATTTAGTCGCATGTACTCTTGGAGGGACTGGGAAGGCGTGAAAGGGTGGAACAAAGTGGATTCTGGAATTACAATCATGCCATGCCTCTCTTCCTTAGACATAGGTTGGTGCGATGAGCTAGAAACACTGCCAGATTTCCTATGCAAAATACCGCTGCAGAATCTTACCATTGCTTGCTGTCGGGAACTTGCCCAATGTTGCAAAAAAGGCAGCGGAAAGGAGAGGCCCAAGATTTCTCACATCCCAAACATCCAAATTCTGGACTTATTTGGAACCTTTTTAAAACATCGAACCTTCAACAGATATGGTGCACAGGGGCAAAAAAGTTTCCAGCTTATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

699

Amino Acids

79.24

Weight (kDa)

8.23

Isoelectric Point (pI)

38.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 7 - 84 7.7e-15 NB-ARC domain
WHD_DRP PF23559 168 - 240 6.7e-25 Disease resistance protein Winged helix domain
LRR_14 PF23598 289 - 619 4.7e-29 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 429 - 547 1.8e-25 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 519
AccB7I CCANNNNNTGG 1 cut(s) 2014
AccI GTMKAC 4 cut(s) 258, 865, 906, 1082
AccII CGCG 2 cut(s) 139, 634
AciI CCGC 5 cut(s) 634, 1369, 1564, 1907, 1968
AclI AACGTT 1 cut(s) 818
AclWI GGATC 3 cut(s) 3, 16, 84
AcoI YGGCCR 1 cut(s) 1517
AcsI RAATTY 8 cut(s) 926, 949, 961, 1036, 1329, 1584, 1754, 2010
AcuI CTGAAG 1 cut(s) 1763
AcyI GRCGYC 1 cut(s) 1056
AfaI GTAC 7 cut(s) 834, 975, 1002, 1190, 1443, 1628, 1769
AfiI CCNNNNNNNGG 5 cut(s) 18, 1040, 1309, 1598, 2014
AflIII ACRYGT 2 cut(s) 1012, 1236
AhlI ACTAGT 1 cut(s) 127
AjiI CACGTC 1 cut(s) 1237
AjnI CCWGG 4 cut(s) 575, 1308, 1426, 1514
AluBI AGCT 6 cut(s) 1149, 1280, 1306, 1624, 1873, 2089
AluI AGCT 6 cut(s) 1149, 1280, 1306, 1624, 1873, 2089
Alw21I GWGCWC 2 cut(s) 1363, 2068
Alw26I GTCTC 3 cut(s) 1003, 1322, 1427
Alw44I GTGCAC 1 cut(s) 2064
AlwI GGATC 3 cut(s) 3, 16, 84
AoxI GGCC 3 cut(s) 465, 1517, 1979
ApaLI GTGCAC 1 cut(s) 2064
ApeKI GCWGC 2 cut(s) 1909, 1965
ApoI RAATTY 8 cut(s) 926, 949, 961, 1036, 1329, 1584, 1754, 2010
ArsI GACNNNNNNTTYG 2 cut(s) 934, 966
AseI ATTAAT 1 cut(s) 543
Asp700I GAANNNNTTC 1 cut(s) 1272
AspLEI GCGC 1 cut(s) 634
AspS9I GGNCC 4 cut(s) 54, 466, 1090, 1980
AsuHPI GGTGA 5 cut(s) 721, 1004, 1354, 1421, 1676
AvaII GGWCC 2 cut(s) 54, 1090
BaeGI GKGCMC 2 cut(s) 1111, 2068
BamHI GGATCC 1 cut(s) 8
BarI GAAGNNNNNNTAC 4 cut(s) 15, 47, 816, 848
BbsI GAAGAC 1 cut(s) 66
Bbv12I GWGCWC 2 cut(s) 1363, 2068
BbvCI CCTCAGC 2 cut(s) 111, 759
BbvI GCAGC 2 cut(s) 1896, 1977
BccI CCATC 2 cut(s) 547, 1163
BceAI ACGGC 2 cut(s) 1043, 1594
BciT130I CCWGG 4 cut(s) 577, 1310, 1428, 1516
BclI TGATCA 2 cut(s) 183, 1690
BcoDI GTCTC 3 cut(s) 1003, 1322, 1427
BcuI ACTAGT 1 cut(s) 127
BfaI CTAG 7 cut(s) 128, 156, 900, 912, 957, 1232, 1874
BfmI CTRYAG 1 cut(s) 1910
BisI GCNGC 2 cut(s) 1910, 1966
BlsI GCNGC 2 cut(s) 1911, 1967
BmcAI AGTACT 1 cut(s) 1190
Bme1390I CCNGG 4 cut(s) 577, 1310, 1428, 1516
Bme18I GGWCC 2 cut(s) 54, 1090
BmgBI CACGTC 1 cut(s) 1237
BmgT120I GGNCC 4 cut(s) 54, 466, 1090, 1980
BmiI GGNNCC 4 cut(s) 10, 468, 1425, 2029
BmrFI CCNGG 4 cut(s) 577, 1310, 1428, 1516
BmrI ACTGGG 2 cut(s) 797, 1792
BmsI GCATC 4 cut(s) 87, 1091, 1165, 1629
BmuI ACTGGG 2 cut(s) 797, 1792
BoxI GACNNNNGTC 1 cut(s) 1239
BpiI GAAGAC 1 cut(s) 66
BpmI CTGGAG 2 cut(s) 1292, 1449
Bpu10I CCTNAGC 2 cut(s) 111, 759
BsaAI YACGTR 1 cut(s) 1630
BsaBI GATNNNNATC 1 cut(s) 1689
BsaHI GRCGYC 1 cut(s) 1056
BsaI GGTCTC 1 cut(s) 1427
BsaJI CCNNGG 4 cut(s) 576, 966, 1086, 1309
Bsc4I CCNNNNNNNGG 5 cut(s) 18, 1040, 1309, 1598, 2014
Bse1I ACTGG 4 cut(s) 676, 792, 1437, 1787
Bse3DI GCAATG 1 cut(s) 1923
Bse8I GATNNNNATC 1 cut(s) 1689
BseBI CCWGG 4 cut(s) 577, 1310, 1428, 1516
BseDI CCNNGG 4 cut(s) 576, 966, 1086, 1309
BseGI GGATG 7 cut(s) 49, 538, 558, 1106, 1715, 1995, 2004
BseJI GATNNNNATC 1 cut(s) 1689
BseLI CCNNNNNNNGG 5 cut(s) 18, 1040, 1309, 1598, 2014
BseMI GCAATG 1 cut(s) 1923
BseMII CTCAG 4 cut(s) 102, 258, 750, 1333
BseNI ACTGG 4 cut(s) 676, 792, 1437, 1787
BseRI GAGGAG 2 cut(s) 1436, 1584
BseSI GKGCMC 2 cut(s) 1111, 2068
BseXI GCAGC 2 cut(s) 1896, 1977
BseYI CCCAGC 2 cut(s) 1280, 1642
Bsh1236I CGCG 2 cut(s) 139, 634
BshFI GGCC 3 cut(s) 467, 1519, 1981
BsiHKAI GWGCWC 2 cut(s) 1363, 2068
BslFI GGGAC 2 cut(s) 1385, 1793
BslI CCNNNNNNNGG 5 cut(s) 18, 1040, 1309, 1598, 2014
BsmAI GTCTC 3 cut(s) 1003, 1322, 1427
BsmFI GGGAC 2 cut(s) 1385, 1793
BsnI GGCC 3 cut(s) 467, 1519, 1981
Bso31I GGTCTC 1 cut(s) 1427
Bsp1286I GDGCHC 3 cut(s) 1111, 1363, 2068
Bsp1407I TGTACA 1 cut(s) 1441
Bsp143I GATC 5 cut(s) 8, 76, 183, 222, 1690
Bsp19I CCATGG 1 cut(s) 966
BspACI CCGC 5 cut(s) 634, 1369, 1564, 1907, 1968
BspANI GGCC 3 cut(s) 467, 1519, 1981
BspCNI CTCAG 4 cut(s) 103, 259, 751, 1332
BspFNI CGCG 2 cut(s) 139, 634
BspLI GGNNCC 4 cut(s) 10, 468, 1425, 2029
BspMAI CTGCAG 1 cut(s) 1914
BspPI GGATC 3 cut(s) 3, 16, 84
BspTNI GGTCTC 1 cut(s) 1427
BsrDI GCAATG 1 cut(s) 1923
BsrGI TGTACA 1 cut(s) 1441
BsrI ACTGG 4 cut(s) 676, 792, 1437, 1787
BssECI CCNNGG 4 cut(s) 576, 966, 1086, 1309
BssMI GATC 5 cut(s) 8, 76, 183, 222, 1690
BssNAI GTATAC 1 cut(s) 1083
BssNI GRCGYC 1 cut(s) 1056
BssT1I CCWWGG 2 cut(s) 966, 1086
Bst1107I GTATAC 1 cut(s) 1083
Bst2UI CCWGG 4 cut(s) 577, 1310, 1428, 1516
Bst4CI ACNGT 4 cut(s) 613, 665, 743, 773
Bst6I CTCTTC 1 cut(s) 1849
BstACI GRCGYC 1 cut(s) 1056
BstAUI TGTACA 1 cut(s) 1441
BstBAI YACGTR 1 cut(s) 1630
BstC8I GCNNGC 1 cut(s) 1930
BstDEI CTNAG 7 cut(s) 111, 267, 449, 759, 938, 1319, 1849
BstDSI CCRYGG 1 cut(s) 966
BstF5I GGATG 7 cut(s) 49, 538, 558, 1106, 1715, 1995, 2004
BstFNI CGCG 2 cut(s) 139, 634
BstHHI GCGC 1 cut(s) 634
BstKTI GATC 5 cut(s) 11, 79, 186, 225, 1693
BstMAI GTCTC 3 cut(s) 1003, 1322, 1427
BstMBI GATC 5 cut(s) 8, 76, 183, 222, 1690
BstMWI GCNNNNNNNGC 3 cut(s) 764, 1277, 1962
BstNI CCWGG 4 cut(s) 577, 1310, 1428, 1516
BstNSI RCATGY 2 cut(s) 1016, 1768
BstPAI GACNNNNGTC 1 cut(s) 1239
BstSCI CCNGG 4 cut(s) 575, 1308, 1426, 1514
BstSFI CTRYAG 1 cut(s) 1910
BstSLI GKGCMC 2 cut(s) 1111, 2068
BstSNI TACGTA 1 cut(s) 1630
BstUI CGCG 2 cut(s) 139, 634
BstV1I GCAGC 2 cut(s) 1896, 1977
BstV2I GAAGAC 1 cut(s) 66
BstX2I RGATCY 1 cut(s) 8
BstYI RGATCY 1 cut(s) 8
BstZ17I GTATAC 1 cut(s) 1083
BsuRI GGCC 3 cut(s) 467, 1519, 1981
BtgI CCRYGG 1 cut(s) 966
BtgZI GCGATG 1 cut(s) 1881
BtrI CACGTC 1 cut(s) 1237
BtsCI GGATG 7 cut(s) 49, 538, 558, 1106, 1715, 1995, 2004
BtsI GCAGTG 1 cut(s) 1880
BtsIMutI CAGTG 3 cut(s) 669, 1444, 1880
Cac8I GCNNGC 1 cut(s) 1930
CfoI GCGC 1 cut(s) 634
Cfr13I GGNCC 4 cut(s) 54, 466, 1090, 1980
CseI GACGC 2 cut(s) 917, 1064
Csp6I GTAC 7 cut(s) 833, 974, 1001, 1189, 1442, 1627, 1768
CviQI GTAC 7 cut(s) 833, 974, 1001, 1189, 1442, 1627, 1768
DdeI CTNAG 7 cut(s) 111, 267, 449, 759, 938, 1319, 1849
DpnI GATC 5 cut(s) 10, 78, 185, 224, 1692
DpnII GATC 5 cut(s) 8, 76, 183, 222, 1690
DraI TTTAAA 2 cut(s) 1539, 2037
EaeI YGGCCR 1 cut(s) 1517
Eam1104I CTCTTC 1 cut(s) 1849
EarI CTCTTC 1 cut(s) 1849
Eco105I TACGTA 1 cut(s) 1630
Eco130I CCWWGG 2 cut(s) 966, 1086
Eco31I GGTCTC 1 cut(s) 1427
Eco32I GATATC 1 cut(s) 283
Eco47I GGWCC 2 cut(s) 54, 1090
Eco57I CTGAAG 1 cut(s) 1763
EcoRII CCWGG 4 cut(s) 575, 1308, 1426, 1514
EcoRV GATATC 1 cut(s) 283
EcoT14I CCWWGG 2 cut(s) 966, 1086
ErhI CCWWGG 2 cut(s) 966, 1086
FalI AAGNNNNNCTT 2 cut(s) 552, 584
FaqI GGGAC 2 cut(s) 1385, 1793
FauI CCCGC 2 cut(s) 1362, 1557
FbaI TGATCA 2 cut(s) 183, 1690
FblI GTMKAC 4 cut(s) 258, 865, 906, 1082
Fnu4HI GCNGC 2 cut(s) 1910, 1966
FokI GGATG 7 cut(s) 56, 545, 565, 1113, 1702, 1982, 1991
Fsp4HI GCNGC 2 cut(s) 1910, 1966
FspBI CTAG 7 cut(s) 128, 156, 900, 912, 957, 1232, 1874
GlaI GCGC 1 cut(s) 633
GluI GCNGC 2 cut(s) 1910, 1966
GsaI CCCAGC 2 cut(s) 1284, 1646
GsuI CTGGAG 2 cut(s) 1292, 1449
HaeIII GGCC 3 cut(s) 467, 1519, 1981
HgaI GACGC 2 cut(s) 917, 1064
HhaI GCGC 1 cut(s) 634
Hin1I GRCGYC 1 cut(s) 1056
Hin6I GCGC 1 cut(s) 632
HinP1I GCGC 1 cut(s) 632
HincII GTYRAC 1 cut(s) 1258
HindII GTYRAC 1 cut(s) 1258
HinfI GANTC 7 cut(s) 88, 263, 1030, 1481, 1551, 1814, 1915
HphI GGTGA 5 cut(s) 721, 1004, 1354, 1421, 1676
Hpy188I TCNGA 5 cut(s) 268, 390, 1299, 1322, 2096
Hpy188III TCNNGA 7 cut(s) 6, 647, 957, 1478, 1818, 1937, 2015
Hpy99I CGWCG 1 cut(s) 1268
HpyAV CCTTC 7 cut(s) 497, 730, 818, 1103, 1333, 1781, 2059
HpyCH4III ACNGT 4 cut(s) 613, 665, 743, 773
HpyCH4IV ACGT 4 cut(s) 384, 818, 1236, 1629
HpyF10VI GCNNNNNNNGC 3 cut(s) 764, 1277, 1962
HpyF3I CTNAG 7 cut(s) 111, 267, 449, 759, 938, 1319, 1849
HpySE526I ACGT 4 cut(s) 384, 818, 1236, 1629
Hsp92I GRCGYC 1 cut(s) 1056
HspAI GCGC 1 cut(s) 632
Ksp22I TGATCA 2 cut(s) 183, 1690
Kzo9I GATC 5 cut(s) 8, 76, 183, 222, 1690
LmnI GCTCC 4 cut(s) 421, 1311, 1358, 1423
Lsp1109I GCAGC 2 cut(s) 1896, 1977
LweI GCATC 4 cut(s) 87, 1091, 1165, 1629
MaeI CTAG 7 cut(s) 128, 156, 900, 912, 957, 1232, 1874
MaeII ACGT 4 cut(s) 384, 818, 1236, 1629
MaeIII GTNAC 4 cut(s) 130, 203, 452, 665
MalI GATC 5 cut(s) 10, 78, 185, 224, 1692
MboI GATC 5 cut(s) 8, 76, 183, 222, 1690
MfeI CAATTG 2 cut(s) 853, 1364
MflI RGATCY 1 cut(s) 8
MhlI GDGCHC 3 cut(s) 1111, 1363, 2068
MlyI GAGTC 2 cut(s) 272, 1039
MmeI TCCRAC 3 cut(s) 21, 360, 1420
MroXI GAANNNNTTC 1 cut(s) 1272
MslI CAYNNNNRTG 1 cut(s) 891
MspA1I CMGCKG 2 cut(s) 1909, 1968
MspR9I CCNGG 4 cut(s) 577, 1310, 1428, 1516
MunI CAATTG 2 cut(s) 853, 1364
MvaI CCWGG 4 cut(s) 577, 1310, 1428, 1516
MvnI CGCG 2 cut(s) 139, 634
MwoI GCNNNNNNNGC 3 cut(s) 764, 1277, 1962
NcoI CCATGG 1 cut(s) 966
NdeII GATC 5 cut(s) 8, 76, 183, 222, 1690
NlaIV GGNNCC 4 cut(s) 10, 468, 1425, 2029
NmuCI GTSAC 2 cut(s) 203, 665
NspI RCATGY 2 cut(s) 1016, 1768
PciI ACATGT 1 cut(s) 1012
PcsI WCGNNNNNNNCGW 1 cut(s) 1517
PdmI GAANNNNTTC 1 cut(s) 1272
PfeI GAWTC 5 cut(s) 88, 1481, 1551, 1814, 1915
PflMI CCANNNNNTGG 1 cut(s) 2014
PkrI GCNGC 2 cut(s) 1911, 1967
PleI GAGTC 2 cut(s) 271, 1038
PpsI GAGTC 2 cut(s) 271, 1038
Ppu21I YACGTR 1 cut(s) 1630
PscI ACATGT 1 cut(s) 1012
PshAI GACNNNNGTC 1 cut(s) 1239
PshBI ATTAAT 1 cut(s) 543
PsiI TTATAA 1 cut(s) 519
Psp1406I AACGTT 1 cut(s) 818
Psp6I CCWGG 4 cut(s) 575, 1308, 1426, 1514
PspFI CCCAGC 2 cut(s) 1280, 1642
PspGI CCWGG 4 cut(s) 575, 1308, 1426, 1514
PspN4I GGNNCC 4 cut(s) 10, 468, 1425, 2029
PspPI GGNCC 4 cut(s) 54, 466, 1090, 1980
PstI CTGCAG 1 cut(s) 1914
PsuI RGATCY 1 cut(s) 8
RsaI GTAC 7 cut(s) 834, 975, 1002, 1190, 1443, 1628, 1769
RsaNI GTAC 7 cut(s) 833, 974, 1001, 1189, 1442, 1627, 1768
RseI CAYNNNNRTG 1 cut(s) 891
SatI GCNGC 2 cut(s) 1910, 1966
Sau3AI GATC 5 cut(s) 8, 76, 183, 222, 1690
Sau96I GGNCC 4 cut(s) 54, 466, 1090, 1980
ScaI AGTACT 1 cut(s) 1190
SchI GAGTC 2 cut(s) 272, 1039
ScrFI CCNGG 4 cut(s) 577, 1310, 1428, 1516
SduI GDGCHC 3 cut(s) 1111, 1363, 2068
SfaNI GCATC 4 cut(s) 87, 1091, 1165, 1629
SfcI CTRYAG 1 cut(s) 1910
SinI GGWCC 2 cut(s) 54, 1090
SmiMI CAYNNNNRTG 1 cut(s) 891
SnaBI TACGTA 1 cut(s) 1630
SpeI ACTAGT 1 cut(s) 127
SsiI CCGC 5 cut(s) 634, 1369, 1564, 1907, 1968
SspI AATATT 1 cut(s) 1728
SspMI CTAG 7 cut(s) 128, 156, 900, 912, 957, 1232, 1874
StyD4I CCNGG 4 cut(s) 575, 1308, 1426, 1514
StyI CCWWGG 2 cut(s) 966, 1086
TaaI ACNGT 4 cut(s) 613, 665, 743, 773
TaiI ACGT 4 cut(s) 387, 821, 1239, 1632
TaqI TCGA 3 cut(s) 1511, 1752, 2044
TaqII GACCGA 1 cut(s) 71
TatI WGTACW 5 cut(s) 832, 973, 1188, 1441, 1767
TfiI GAWTC 5 cut(s) 88, 1481, 1551, 1814, 1915
TscAI CASTG 3 cut(s) 676, 1444, 1887
TseFI GTSAC 2 cut(s) 203, 665
TseI GCWGC 2 cut(s) 1909, 1965
Tsp45I GTSAC 2 cut(s) 203, 665
TspDTI ATGAA 3 cut(s) 875, 1379, 1466
TspGWI ACGGA 1 cut(s) 767
TspRI CASTG 3 cut(s) 676, 1444, 1887
Van91I CCANNNNNTGG 1 cut(s) 2014
VneI GTGCAC 1 cut(s) 2064
VpaK11BI GGWCC 2 cut(s) 54, 1090
VspI ATTAAT 1 cut(s) 543
XapI RAATTY 8 cut(s) 926, 949, 961, 1036, 1329, 1584, 1754, 2010
XbaI TCTAGA 1 cut(s) 956
XceI RCATGY 2 cut(s) 1016, 1768
XcmI CCANNNNNNNNNTGG 1 cut(s) 1403
XmiI GTMKAC 4 cut(s) 258, 865, 906, 1082
XmnI GAANNNNTTC 1 cut(s) 1272
XspI CTAG 7 cut(s) 128, 156, 900, 912, 957, 1232, 1874
ZrmI AGTACT 1 cut(s) 1190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.