Prupe.1G528800_v2.0.a1

disease resistance protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
43262315 .. 43266633
4319 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G528800.3

Sequence Viewer

Length: 2934 bp
ATGGCTGAAGCACTTGTTTCCGTGGTCCTTGAGCAGTTGGTTTCCATCGCACGTAAACAGATAGGAGAAGAGGTGAGGCTGGTCGTGAATGTTGACAGAGAAGTTGAAAATCTCATCTTCCATTTCAATGCTATTCAAGCTGTGCTCCAGGATGCAGAGGAGAGGCAGGTGAAGGAGGCCCGCGTCAGAAACTGGCTGCGGAGTCTGGAAGATGTGTCGTACGACATTAACGATCTGTTGGACGAGTGGAACACTGAAATTCTCAAGCACCAAATTGAGCAAGAAGAGAAAGAAGGTGTTGCCCTTACAAAAAGGAAGAAGGTATGCCTCTTCATTCCCTCCCCTAGCGTTTGTTGTGGTCGTGGTCCAATTGATAAAGTAGTTAGGCGTCATGACATTGCTAAGAGAATAAAAGAAACACATGAAAAGTTAACTGATATAGCCAATTCAAAACAAAATTATAACTTTCATGAGAACACAATTAGAGCCACTGAGAAACTTGAACGGGCTGAAACTTCTTCTTTTGTCGAAGTGTCTAGTATAATTGGTCGTGAAGAGGAGAAAAAAAGATTAATGAGCATGTTGTTAAGCGAGAGCAGTCAACAAGAGAGGAGCCCATTTGTTGTGATCCCCATTGTGGGGATGGGAGGACTGGGAAAAACTGCATTTGCGCAGTTAGTCTATAATGATGATGAAAATATAAAAACTCATTTTGACACTAGAATATGGGTTTGTGTGTCAGACCCTTTTGAAGAGATCAAGATTGCCAGAGCCATTGCTCAAGCTCTAAATAAAGATGATAATCGAATTAATTCAACTAGTTTGCAACCTTTGTTGGAATGTATAAATGAATATATTAGTGGTAAAAAATTATTCCTTGTTCTAGATGATGTGTGGAATCCAACCATTGATAATTGGGAACCATTAATGGGAGCTTTACAAAATAGTGCTATAGGCAGTAGAATATTGGTGACCACCCGAAAAGAGACGGTTGCTGCTGTGATGGGAGCAACCGCTGATCACGTAATCCATTTGAACATCTTGAGTGATCAAGATTGTTTGCAATTATTCAATAAAATTGCTTTCTTTGATAGAGAACGAGATGATCAGCTTGAAGTTATTGGGAGAAAAATTGTTAAAAAGTGCAATGGTTTGCCTCTTGCTGCAAAGACTCTAGCTAGTCTTATGCGATATAAGAAAAACAGACAAGAATGGGTAGATGTTTTGGATAGTAAGATATGGGATTTAAAAGAGATTGAACAACAGGTTTTTCGATCCCTATTCTTAAGCTATTATGAGTTGACTCCGGCAATTAGACGTTGTCTTTTATATTGTGCCACTTTTCCGAAAGATTATGAGTTTAATAAGCATGAATTGATTCAGTTGTGGATGTCAAATAACTATCTTAGTACAGAAGGGGATAAAGAAAAAGAAACACTAAGAGGTCAAAGCTATTTTGATAACTTAGTAATGCGGTCTTTCTTTCAAGATTTTGATAAAGATGACGAAGACAATATTGAAAGCTGCAAAATGCATGACATTGTGCACGATTTTGTACAGTTTCTGACAAAACATGAATGTATTGTTATGGAGGTTGGGTGTGACAATGAGAGAAACAAGGTATTGAATGATAAAGTTCGTCATTTGTGTTTAACGTCCATCTCAGATGGATCATTTCCTGTTTCAATTTACAGTTGCAATAGATTACGTACTCTTCTAGCTTCTCGGTTGAGACTTTCTGCATTAAGCTTAGATATAGTTTTACAATTGAAATGCCTTAGGACATTAGATTTGAGTTACAACTTGATAACAGATGTTTCTAAAGAGATCGGGGTACTAATACATTTGCGGTATCTTAATTTATCTTGGAATCTTAAGTTGGAAGAATTACCCGATACTGTGGGTAATTTATACAATCTGCAAACATTGGTACTCGAGAATTGCAGAGCACTTAAAACACTACCAGTGACAACAAGAAAGTTGATTAACTTAAAGCACCTTAATCTTGAGGATTGCGACAGTCTAAAAGTACCAAAAGAGATTGGAAGATTAAAAAATCTGGAAACACTTCATGGCTTAATTCTCTACGATGATGTTGACGAGAATAAAGGCTTGATCAAGTTAGGGGATTTGGGAAACTTGGATCAGCTTCGAGATATTTGGATATGTAACTTGAAGTCAGTGCAAGATGTGAGTGAGGTCAATAAGGCACTATTTGTGAATAAGAAAAACCTCAATACTCTGCTTCTAAATTTTGATCAGTCAATGGATGCAAGTGAAAGCGAAGAAGGTGAGCTTCAGAGAGAAATGGATGAAAAAATACTGAATGCCTTTCAACCACATACAAATTTGGAGAGGTTAGTTATCGGCAATTACCACGGTCTCACTCTGTGCCTCAATTGGATGATGTCGTTGCATAGTTTGAAAATGCTTGTTGTTGGATTTCTTCCATTTTGTGAGCTTTTGCCTCCTCTTGGGAAATTGCCGTCCCTTGAATATCTTACAATAGATGATATGAAGAGTCTTAAAAAGTTGGGAATTGATTTTTTGGGAATAGATGATCAATTGGAAACGCCAACAATATTATTCCCGAAATTGAAAAAACTCCGGTTCGAAAGCATGGTGAAGTGGGAAGATTGGGAAGGAGTTGAAGGGCACAGGGAGGGAGAGGATTCTGAAATTAAATTAATGCCATCTCTTTCAACCTTAACAATCAAGTCATGTCCTAATCTGAAAGCAGTGCCGGACTTCCTGTGGAAGACGCCGCTGCAGAAATTAGTCATTAGTGAGTGTGAGAATATTCTCCAAGGTTGCGAAACAGCAAGTGGCAGGGAGTGGGACAAGGTCTCTCACATCCAAAACATCAAAATTAATTCTAAATATGTACAAAAAGACGGAGTTCGGATGGAGCCAGAGACAACAGAGATTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

978

Amino Acids

112.35

Weight (kDa)

5.46

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 462
AarI CACCTGC 1 cut(s) 157
Acc16I TGCGCA 1 cut(s) 672
Acc36I ACCTGC 1 cut(s) 157
AccII CGCG 1 cut(s) 183
AciI CCGC 6 cut(s) 181, 199, 1014, 1474, 1849, 2765
AclWI GGATC 4 cut(s) 622, 1269, 1678, 2151
AcsI RAATTY 3 cut(s) 258, 2251, 2347
AcuI CTGAAG 2 cut(s) 27, 2282
AcyI GRCGYC 2 cut(s) 388, 2762
AdeI CACNNNGTG 1 cut(s) 2391
AfaI GTAC 8 cut(s) 221, 1411, 1557, 1711, 1836, 1932, 2031, 2886
AfiI CCNNNNNNNGG 5 cut(s) 637, 638, 639, 929, 2474
AflII CTTAAG 2 cut(s) 1285, 1874
AhlI ACTAGT 1 cut(s) 818
AjnI CCWGG 1 cut(s) 147
AjuI GAANNNNNNNTTGG 2 cut(s) 1862, 1894
Alw21I GWGCWC 3 cut(s) 147, 1548, 1951
Alw26I GTCTC 5 cut(s) 980, 1726, 2387, 2851, 2909
Alw44I GTGCAC 1 cut(s) 1544
AlwI GGATC 4 cut(s) 622, 1269, 1678, 2151
AlwNI CAGNNNCTG 2 cut(s) 192, 1564
Ama87I CYCGRG 1 cut(s) 1934
AoxI GGCC 1 cut(s) 177
ApaLI GTGCAC 1 cut(s) 1544
ApeKI GCWGC 5 cut(s) 196, 995, 1163, 1524, 2767
ApoI RAATTY 3 cut(s) 258, 2251, 2347
ArsI GACNNNNNNTTYG 2 cut(s) 1774, 1806
AseI ATTAAT 5 cut(s) 572, 810, 926, 2687, 2871
Asp700I GAANNNNTTC 3 cut(s) 811, 1377, 2067
AspLEI GCGC 1 cut(s) 673
AspS9I GGNCC 3 cut(s) 25, 178, 365
AsuHPI GGTGA 5 cut(s) 85, 181, 982, 2303, 2635
AsuII TTCGAA 1 cut(s) 2613
AvaI CYCGRG 1 cut(s) 1934
AvaII GGWCC 2 cut(s) 25, 365
AxyI CCTNAGG 1 cut(s) 1778
BaeGI GKGCMC 2 cut(s) 1548, 2658
BanII GRGCYC 1 cut(s) 617
BbsI GAAGAC 2 cut(s) 1515, 2765
Bbv12I GWGCWC 3 cut(s) 147, 1548, 1951
BbvI GCAGC 5 cut(s) 183, 982, 1150, 1511, 2754
BccI CCATC 7 cut(s) 53, 637, 997, 1661, 1667, 2701, 2899
BceAI ACGGC 1 cut(s) 2470
BciT130I CCWGG 1 cut(s) 149
BclI TGATCA 6 cut(s) 1018, 1048, 1105, 2115, 2257, 2560
BcoDI GTCTC 5 cut(s) 980, 1726, 2387, 2851, 2909
BcuI ACTAGT 1 cut(s) 818
BfaI CTAG 8 cut(s) 345, 537, 720, 819, 884, 1175, 1179, 1718
BfmI CTRYAG 2 cut(s) 951, 2768
BfrI CTTAAG 2 cut(s) 1285, 1874
BfuAI ACCTGC 1 cut(s) 157
BisI GCNGC 6 cut(s) 197, 996, 1164, 1525, 2765, 2768
BlsI GCNGC 6 cut(s) 198, 997, 1165, 1526, 2766, 2769
Bme1390I CCNGG 1 cut(s) 149
Bme18I GGWCC 2 cut(s) 25, 365
BmeT110I CYCGRG 1 cut(s) 1934
BmgT120I GGNCC 3 cut(s) 25, 178, 365
BmiI GGNNCC 3 cut(s) 614, 921, 2910
BmrFI CCNGG 1 cut(s) 149
BmrI ACTGGG 1 cut(s) 662
BmsI GCATC 2 cut(s) 142, 2260
BmuI ACTGGG 1 cut(s) 662
BpiI GAAGAC 2 cut(s) 1515, 2765
BpmI CTGGAG 1 cut(s) 131
Bpu14I TTCGAA 1 cut(s) 2613
BpuEI CTTGAG 5 cut(s) 50, 248, 765, 1063, 2027
BsaAI YACGTR 3 cut(s) 53, 1024, 1709
BsaBI GATNNNNATC 1 cut(s) 801
BsaHI GRCGYC 2 cut(s) 388, 2762
BsaI GGTCTC 2 cut(s) 2387, 2851
BsaJI CCNNGG 3 cut(s) 21, 2377, 2806
BsaWI WCCGGW 1 cut(s) 2607
BsaXI ACNNNNNCTCC 4 cut(s) 57, 87, 1583, 1613
Bsc4I CCNNNNNNNGG 5 cut(s) 637, 638, 639, 929, 2474
Bse1I ACTGG 3 cut(s) 197, 657, 1964
Bse21I CCTNAGG 1 cut(s) 1778
Bse3DI GCAATG 3 cut(s) 396, 774, 1153
Bse8I GATNNNNATC 1 cut(s) 801
BseBI CCWGG 1 cut(s) 149
BseDI CCNNGG 3 cut(s) 21, 2377, 2806
BseGI GGATG 8 cut(s) 157, 648, 1395, 2275, 2317, 2409, 2853, 2910
BseJI GATNNNNATC 1 cut(s) 801
BseLI CCNNNNNNNGG 5 cut(s) 637, 638, 639, 929, 2474
BseMI GCAATG 3 cut(s) 396, 774, 1153
BseMII CTCAG 2 cut(s) 483, 1677
BseNI ACTGG 3 cut(s) 197, 657, 1964
BseRI GAGGAG 4 cut(s) 173, 572, 625, 2460
BseSI GKGCMC 2 cut(s) 1548, 2658
BseXI GCAGC 5 cut(s) 183, 982, 1150, 1511, 2754
Bsh1236I CGCG 1 cut(s) 183
BshFI GGCC 1 cut(s) 179
BsiHKAI GWGCWC 3 cut(s) 147, 1548, 1951
BsiHKCI CYCGRG 1 cut(s) 1934
BsiSI CCGG 3 cut(s) 1307, 2608, 2744
BsiWI CGTACG 1 cut(s) 219
BslFI GGGAC 2 cut(s) 2473, 2852
BslI CCNNNNNNNGG 5 cut(s) 637, 638, 639, 929, 2474
BsmAI GTCTC 5 cut(s) 980, 1726, 2387, 2851, 2909
BsmBI CGTCTC 1 cut(s) 980
BsmFI GGGAC 2 cut(s) 2473, 2852
BsmI GAATGC 1 cut(s) 2332
BsnI GGCC 1 cut(s) 179
Bso31I GGTCTC 2 cut(s) 2387, 2851
BsoBI CYCGRG 1 cut(s) 1934
Bsp119I TTCGAA 1 cut(s) 2613
Bsp1286I GDGCHC 5 cut(s) 147, 617, 1548, 1951, 2658
Bsp1407I TGTACA 2 cut(s) 1555, 2884
BspACI CCGC 6 cut(s) 181, 199, 1014, 1474, 1849, 2765
BspANI GGCC 1 cut(s) 179
BspCNI CTCAG 2 cut(s) 484, 1676
BspFNI CGCG 1 cut(s) 183
BspHI TCATGA 3 cut(s) 391, 469, 2930
BspLI GGNNCC 3 cut(s) 614, 921, 2910
BspMAI CTGCAG 1 cut(s) 2772
BspMI ACCTGC 1 cut(s) 157
BspPI GGATC 4 cut(s) 622, 1269, 1678, 2151
BspT104I TTCGAA 1 cut(s) 2613
BspTI CTTAAG 2 cut(s) 1285, 1874
BspTNI GGTCTC 2 cut(s) 2387, 2851
BsrDI GCAATG 3 cut(s) 396, 774, 1153
BsrGI TGTACA 2 cut(s) 1555, 2884
BsrI ACTGG 3 cut(s) 197, 657, 1964
BssECI CCNNGG 3 cut(s) 21, 2377, 2806
BssNI GRCGYC 2 cut(s) 388, 2762
BssT1I CCWWGG 1 cut(s) 2806
Bst2UI CCWGG 1 cut(s) 149
Bst4CI ACNGT 6 cut(s) 991, 1560, 1694, 1900, 2021, 2381
Bst6I CTCTTC 7 cut(s) 63, 279, 335, 549, 747, 1719, 2513
BstACI GRCGYC 2 cut(s) 388, 2762
BstAFI CTTAAG 2 cut(s) 1285, 1874
BstAUI TGTACA 2 cut(s) 1555, 2884
BstBAI YACGTR 3 cut(s) 53, 1024, 1709
BstBI TTCGAA 1 cut(s) 2613
BstC8I GCNNGC 1 cut(s) 181
BstDEI CTNAG 8 cut(s) 402, 492, 1406, 1439, 1465, 1663, 1750, 1778
BstDSI CCRYGG 2 cut(s) 21, 2377
BstEII GGTNACC 1 cut(s) 970
BstF5I GGATG 8 cut(s) 157, 648, 1395, 2275, 2317, 2409, 2853, 2910
BstFNI CGCG 1 cut(s) 183
BstHHI GCGC 1 cut(s) 673
BstMAI GTCTC 5 cut(s) 980, 1726, 2387, 2851, 2909
BstMWI GCNNNNNNNGC 1 cut(s) 137
BstNI CCWGG 1 cut(s) 149
BstNSI RCATGY 1 cut(s) 583
BstPI GGTNACC 1 cut(s) 970
BstSCI CCNGG 1 cut(s) 147
BstSFI CTRYAG 2 cut(s) 951, 2768
BstSLI GKGCMC 2 cut(s) 1548, 2658
BstSNI TACGTA 1 cut(s) 1709
BstUI CGCG 1 cut(s) 183
BstV1I GCAGC 5 cut(s) 183, 982, 1150, 1511, 2754
BstV2I GAAGAC 2 cut(s) 1515, 2765
Bsu36I CCTNAGG 1 cut(s) 1778
BsuRI GGCC 1 cut(s) 179
BtgI CCRYGG 2 cut(s) 21, 2377
BtgZI GCGATG 1 cut(s) 31
BtsCI GGATG 8 cut(s) 157, 648, 1395, 2275, 2317, 2409, 2853, 2910
BtsI GCAGTG 1 cut(s) 2745
BtsIMutI CAGTG 5 cut(s) 252, 489, 1971, 2187, 2745
BveI ACCTGC 1 cut(s) 157
Cac8I GCNNGC 1 cut(s) 181
CaiI CAGNNNCTG 2 cut(s) 192, 1564
CciI TCATGA 3 cut(s) 391, 469, 2930
CfoI GCGC 1 cut(s) 673
Cfr13I GGNCC 3 cut(s) 25, 178, 365
CseI GACGC 3 cut(s) 172, 377, 2770
Csp6I GTAC 8 cut(s) 220, 1410, 1556, 1710, 1835, 1931, 2030, 2885
CviQI GTAC 8 cut(s) 220, 1410, 1556, 1710, 1835, 1931, 2030, 2885
DdeI CTNAG 8 cut(s) 402, 492, 1406, 1439, 1465, 1663, 1750, 1778
DraI TTTAAA 1 cut(s) 1248
DraIII CACNNNGTG 1 cut(s) 2391
Eam1104I CTCTTC 7 cut(s) 63, 279, 335, 549, 747, 1719, 2513
EarI CTCTTC 7 cut(s) 63, 279, 335, 549, 747, 1719, 2513
Eco105I TACGTA 1 cut(s) 1709
Eco130I CCWWGG 1 cut(s) 2806
Eco24I GRGCYC 1 cut(s) 617
Eco31I GGTCTC 2 cut(s) 2387, 2851
Eco47I GGWCC 2 cut(s) 25, 365
Eco57I CTGAAG 2 cut(s) 27, 2282
Eco81I CCTNAGG 1 cut(s) 1778
Eco88I CYCGRG 1 cut(s) 1934
Eco91I GGTNACC 1 cut(s) 970
EcoO65I GGTNACC 1 cut(s) 970
EcoRII CCWGG 1 cut(s) 147
EcoT14I CCWWGG 1 cut(s) 2806
EcoT22I ATGCAT 1 cut(s) 1536
EcoT38I GRGCYC 1 cut(s) 617
ErhI CCWWGG 1 cut(s) 2806
Esp3I CGTCTC 1 cut(s) 980
FalI AAGNNNNNCTT 2 cut(s) 2280, 2312
FaqI GGGAC 2 cut(s) 2473, 2852
FauI CCCGC 1 cut(s) 188
FbaI TGATCA 6 cut(s) 1018, 1048, 1105, 2115, 2257, 2560
Fnu4HI GCNGC 6 cut(s) 197, 996, 1164, 1525, 2765, 2768
FokI GGATG 8 cut(s) 164, 655, 1402, 2282, 2324, 2416, 2840, 2917
FriOI GRGCYC 1 cut(s) 617
Fsp4HI GCNGC 6 cut(s) 197, 996, 1164, 1525, 2765, 2768
FspBI CTAG 8 cut(s) 345, 537, 720, 819, 884, 1175, 1179, 1718
FspI TGCGCA 1 cut(s) 672
GlaI GCGC 1 cut(s) 672
GluI GCNGC 6 cut(s) 197, 996, 1164, 1525, 2765, 2768
GsuI CTGGAG 1 cut(s) 131
HaeIII GGCC 1 cut(s) 179
HapII CCGG 3 cut(s) 1307, 2608, 2744
HgaI GACGC 3 cut(s) 172, 377, 2770
HhaI GCGC 1 cut(s) 673
Hin1I GRCGYC 2 cut(s) 388, 2762
Hin6I GCGC 1 cut(s) 671
HinP1I GCGC 1 cut(s) 671
HincII GTYRAC 5 cut(s) 94, 432, 602, 1302, 2098
HindII GTYRAC 5 cut(s) 94, 432, 602, 1302, 2098
HindIII AAGCTT 1 cut(s) 1747
HinfI GANTC 8 cut(s) 202, 898, 1171, 1303, 1378, 1870, 2521, 2672
HpaI GTTAAC 1 cut(s) 432
HpaII CCGG 3 cut(s) 1307, 2608, 2744
HphI GGTGA 5 cut(s) 85, 181, 982, 2303, 2635
Hpy166II GTNNAC 7 cut(s) 56, 94, 432, 602, 1302, 1546, 2098
Hpy188I TCNGA 9 cut(s) 188, 742, 1347, 1566, 1666, 2301, 2677, 2733, 2904
Hpy8I GTNNAC 7 cut(s) 56, 94, 432, 602, 1302, 1546, 2098
HpyAV CCTTC 7 cut(s) 166, 287, 313, 1409, 2282, 2636, 2645
HpyCH4III ACNGT 6 cut(s) 991, 1560, 1694, 1900, 2021, 2381
HpyCH4IV ACGT 5 cut(s) 52, 1023, 1318, 1655, 1708
HpyF10VI GCNNNNNNNGC 1 cut(s) 137
HpyF3I CTNAG 8 cut(s) 402, 492, 1406, 1439, 1465, 1663, 1750, 1778
HpySE526I ACGT 5 cut(s) 52, 1023, 1318, 1655, 1708
Hsp92I GRCGYC 2 cut(s) 388, 2762
HspAI GCGC 1 cut(s) 671
Ksp22I TGATCA 6 cut(s) 1018, 1048, 1105, 2115, 2257, 2560
KspAI GTTAAC 1 cut(s) 432
LmnI GCTCC 5 cut(s) 150, 612, 932, 1007, 2908
Lsp1109I GCAGC 5 cut(s) 183, 982, 1150, 1511, 2754
LweI GCATC 2 cut(s) 142, 2260
MaeI CTAG 8 cut(s) 345, 537, 720, 819, 884, 1175, 1179, 1718
MaeII ACGT 5 cut(s) 52, 1023, 1318, 1655, 1708
MaeIII GTNAC 5 cut(s) 970, 1601, 1796, 1966, 2168
MfeI CAATTG 4 cut(s) 369, 1766, 2398, 2564
MhlI GDGCHC 5 cut(s) 147, 617, 1548, 1951, 2658
MlyI GAGTC 4 cut(s) 211, 1165, 1297, 2530
MmeI TCCRAC 5 cut(s) 219, 816, 926, 1860, 2419
Mph1103I ATGCAT 1 cut(s) 1536
MroXI GAANNNNTTC 3 cut(s) 811, 1377, 2067
MslI CAYNNNNRTG 1 cut(s) 126
MspA1I CMGCKG 2 cut(s) 1016, 2767
MspCI CTTAAG 2 cut(s) 1285, 1874
MspI CCGG 3 cut(s) 1307, 2608, 2744
MspR9I CCNGG 1 cut(s) 149
MunI CAATTG 4 cut(s) 369, 1766, 2398, 2564
Mva1269I GAATGC 1 cut(s) 2332
MvaI CCWGG 1 cut(s) 149
MvnI CGCG 1 cut(s) 183
MwoI GCNNNNNNNGC 1 cut(s) 137
NlaIV GGNNCC 3 cut(s) 614, 921, 2910
NmuCI GTSAC 3 cut(s) 970, 1601, 1966
NsbI TGCGCA 1 cut(s) 672
NsiI ATGCAT 1 cut(s) 1536
NspI RCATGY 1 cut(s) 583
NspV TTCGAA 1 cut(s) 2613
PaeR7I CTCGAG 1 cut(s) 1934
PagI TCATGA 3 cut(s) 391, 469, 2930
PaqCI CACCTGC 1 cut(s) 157
PcsI WCGNNNNNNNCGW 1 cut(s) 228
PctI GAATGC 1 cut(s) 2332
PdmI GAANNNNTTC 3 cut(s) 811, 1377, 2067
PfeI GAWTC 4 cut(s) 898, 1378, 1870, 2672
Pfl23II CGTACG 1 cut(s) 219
PflFI GACNNNGTC 2 cut(s) 1320, 2843
PfoI TCCNGGA 1 cut(s) 147
PkrI GCNGC 6 cut(s) 198, 997, 1165, 1526, 2766, 2769
PleI GAGTC 4 cut(s) 210, 1165, 1297, 2529
PpsI GAGTC 4 cut(s) 210, 1165, 1297, 2529
Ppu21I YACGTR 3 cut(s) 53, 1024, 1709
PshBI ATTAAT 5 cut(s) 572, 810, 926, 2687, 2871
PsiI TTATAA 1 cut(s) 462
Psp6I CCWGG 1 cut(s) 147
PspEI GGTNACC 1 cut(s) 970
PspGI CCWGG 1 cut(s) 147
PspLI CGTACG 1 cut(s) 219
PspN4I GGNNCC 3 cut(s) 614, 921, 2910
PspPI GGNCC 3 cut(s) 25, 178, 365
PstI CTGCAG 1 cut(s) 2772
PstNI CAGNNNCTG 2 cut(s) 192, 1564
PsyI GACNNNGTC 2 cut(s) 1320, 2843
RsaI GTAC 8 cut(s) 221, 1411, 1557, 1711, 1836, 1932, 2031, 2886
RsaNI GTAC 8 cut(s) 220, 1410, 1556, 1710, 1835, 1931, 2030, 2885
RseI CAYNNNNRTG 1 cut(s) 126
SatI GCNGC 6 cut(s) 197, 996, 1164, 1525, 2765, 2768
Sau96I GGNCC 3 cut(s) 25, 178, 365
SchI GAGTC 4 cut(s) 211, 1165, 1297, 2530
ScrFI CCNGG 1 cut(s) 149
SduI GDGCHC 5 cut(s) 147, 617, 1548, 1951, 2658
SfaNI GCATC 2 cut(s) 142, 2260
SfcI CTRYAG 2 cut(s) 951, 2768
Sfr274I CTCGAG 1 cut(s) 1934
SfuI TTCGAA 1 cut(s) 2613
SinI GGWCC 2 cut(s) 25, 365
SlaI CTCGAG 1 cut(s) 1934
SmiMI CAYNNNNRTG 1 cut(s) 126
SmlI CTYRAG 8 cut(s) 29, 263, 780, 1042, 1285, 1874, 1934, 2006
SmoI CTYRAG 8 cut(s) 29, 263, 780, 1042, 1285, 1874, 1934, 2006
SnaBI TACGTA 1 cut(s) 1709
SpeI ACTAGT 1 cut(s) 818
SsiI CCGC 6 cut(s) 181, 199, 1014, 1474, 1849, 2765
SspI AATATT 4 cut(s) 966, 1516, 2583, 2800
SspMI CTAG 8 cut(s) 345, 537, 720, 819, 884, 1175, 1179, 1718
StyD4I CCNGG 1 cut(s) 147
StyI CCWWGG 1 cut(s) 2806
TaaI ACNGT 6 cut(s) 991, 1560, 1694, 1900, 2021, 2381
TaiI ACGT 5 cut(s) 55, 1026, 1321, 1658, 1711
TaqI TCGA 6 cut(s) 528, 805, 1273, 1935, 2152, 2613
TatI WGTACW 3 cut(s) 1409, 1555, 2884
TauI GCSGC 1 cut(s) 2767
TfiI GAWTC 4 cut(s) 898, 1378, 1870, 2672
TscAI CASTG 5 cut(s) 259, 496, 1971, 2187, 2745
TseFI GTSAC 3 cut(s) 970, 1601, 1966
TseI GCWGC 5 cut(s) 196, 995, 1163, 1524, 2767
Tsp45I GTSAC 3 cut(s) 970, 1601, 1966
TspGWI ACGGA 2 cut(s) 10, 2910
TspRI CASTG 5 cut(s) 259, 496, 1971, 2187, 2745
Tth111I GACNNNGTC 2 cut(s) 1320, 2843
Vha464I CTTAAG 2 cut(s) 1285, 1874
VneI GTGCAC 1 cut(s) 1544
VpaK11BI GGWCC 2 cut(s) 25, 365
VspI ATTAAT 5 cut(s) 572, 810, 926, 2687, 2871
XapI RAATTY 3 cut(s) 258, 2251, 2347
XbaI TCTAGA 1 cut(s) 883
XceI RCATGY 1 cut(s) 583
XcmI CCANNNNNNNNNTGG 1 cut(s) 640
XhoI CTCGAG 1 cut(s) 1934
XmnI GAANNNNTTC 3 cut(s) 811, 1377, 2067
XspI CTAG 8 cut(s) 345, 537, 720, 819, 884, 1175, 1179, 1718
Zsp2I ATGCAT 1 cut(s) 1536
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.