RchiOBHm_Chr2g0139801

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000018
Physical Location & Seq
Reverse (-)
57271865 .. 57276585
4721 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51031

Sequence Viewer

Length: 2907 bp
ATGGCTGAGGCCCTCATTTCCGTGCTTCTTGAACAACTGAGTTCAATAACTTATGAATACATGAGAGCAAAGGTGAGATTGATTTTGGATGTAGAGAAAGACGTTGCAGAGTTCACCAGCAATCTCAAAGCAATTCAAGCTGTACTTAAGGACGCAGAGAAGAGGCAAGTCAAGGAAGCTGTGGTGCAAGATTGGTTAGACAAGCTCAAACAAGTGTCGTACGAGATGGACAACGTACTTGATGAGTGGAACACTGAATCTCTAAAACAACAAGTTGAGAAGCAAGAAAATGAAGGTGAGAATACTCTTGTTAATAAGGGGAAAAAGGTGCGTTTCTTCATTCCCTCTCCCTGTAAATGCTTTGGCTTTGGCCAAGGGGTTTTTGTTCATCATGCCATTGCTATGAAAATAAAAGAACTGAATAGTAGGCTAACTTCGATTGCTGAGGAAAGACAAAGGTACCGGTTTCAATCCACAACAATTAGTGGCATTGAACAACCTGAACGACCAAAGAGTTCATCTTTGGTCGATGTATCTAAGGTATTTGGTAGGGAAGATGAAAAGCGTACTTTGATAAGCATGTTATTGGGTAAGAGTAGTGGTAATGAAAAGTTGGGGCCCCTAGTCATCTGTATTATAGGGATGGGGGGCATCGGCAAGACCACTCTTGCACAACTAGCCTTCAACAATGAAGTTGTTAAAGCCCATTTTCAGAATAGAAAATGGGTTTGTGTCTCAGATCCTTTCGACGTGATCAAGATTGCCGAAGCCATCATAGATAAGGATCATGCCCCAACTTCAGATGAGTTGGATGGTTTCATGCAATCTGTGTCTGAATCTGTCGAGGGAAAGAGGTTTCTTCTGGTCCTAGACGACGTCTGGACCGAAGATGATACAAAGTGGGAACCATTAAGGTTAGCTTTAATGTCTGGTGCTGAAGGTAGTAGAATATTGGTGACCACACGAAACAAAGCAGTTGCTCGTATGATGGGAGCAACCACTCAAATTATCCATTTGGAAAAGTTGAGCGATCAGCATTGTTTCTCATTATTCTATCACCTTGCATTTCTTAATAGGGAAAAAGATAAGTCTGATTTGTTTGAAGCCATTGGTAAGGAAATTGTTAAGAAGTGTAAGGGTTCGCCACTTGCCGCAAAGACTTTAGGTAGTCTTATGTGGAATAAGAAAACAACGAAAGAATGGTGTGCTGTTTTGGAGAGTGAGATGTGGGATTTAGAAGAGGTGGAGAAGAAAGTTTTTCAACCGTTATTACTAAGTTATTATGACTTGGCATCAGAAATCAAGCGTTGTCTTCTATTTTGTGCATGTTTTCCACAAGATTATCGATTCTATAAAGACACGTTGATTGAGTTGTGGATGTCACAGAATTATTTCACTTCAAAAAGAAACAAGGAGAAGAGAACTATAGGTCAAGACTATTTTGATAACTTGGTAACGCGGTGTTTCTTTCAAGACTTTGAATTAGATGATAAAGGGAACATTAAATCTTGCAAGATGCATGATATTGTGCATGAGTTTGTAAAGTTTCTTGCCCGGAATGAATCTTTGATTATTGAGGCTGATGGTGCTAACCGATCAACAGAGCTCTCAACTGATAAGGTGTGCCATTTATCTCTAGTGTCAGTAGAGGGTCGAATTTCAGTTCCTATTTCATTTCACAAATGCACAAATCTGCGAACCCTCACAACTTATAATTCAGGAATCACAACAATAGGTGGGGATTTAGTTTTGCAATTGAAATGTCTTAGGACGTTAAATTTGAGTGATAGCGAGGTCCATGAACTTCCCAAGGAGATTGGTGAACTGTTACATTTGAGGTATATTGATTTGTCTCATAATAACAGTCTAGAGGAATTACCTGACGCCATGTGTAATTTGTTCAATCTTGAAACCTTGCACATTGAGTATTGCGGATCACTTACAAAACTGCCCAAGGCTATGGGAAAGTTAATCAACTTAAAGCATCTTTATGTTGCTGGTTGTAGAAGGCTAGAGTACTTGCCGAAAGGGATTGGGAGAATAAGAGGTCTACGTATACTAGATACGTACACTGTTGTCTGTGGTGGTGGTGACGACGACGGCAATGAAATACTGAGGTTGGGAGATCTGGCAATCTTTGACCAGCTTCAGGGCAAGATTGTAATTCGAGATTTGGGGAAAGTGATCGATGCTAGTGAGGCTCAGAAAGCACAATTGGAGAAGAAGAAACACCTCCTTGATTTGGTATTAGATTTTGAGCTAGGAGAAGACTCAGAAGAGGAGCGCCGAAGAAAAAGCGATGTAGAGGTACTGAATGCCTTGCAACCACATCAAAATTTGGAATATTTGGAGATTTCTGACTATGCAGGCACCACGGTGTCTCCAAAATGGTTGATGTCTTTACACCATTTGAGATTTCTTACTCTTGATGGTTGCCATAATTGTGAAAGTTTGCCTCCTCTCGGGAGATTGCAATCTCTTGAAGTTCTGGAAATAGTTGGCATGAGAGTGGAAAAGGTTGGAATTGATTTCTTGGGTATAGAAGAAACTCAAACATCACCTGTTACTGCTTTCCCAAAATTGGAAAAACTCTCCCTTCTGACGAAGGGGTGGAAAGAGTGGGAAGGAGTGCGAGGTTGCATGCAACTGATGCAAGAAGATTGTCAAGTTGCAATAATGCCGCATCTTTCTGACCTACGCATCGAGTCAGAAAGCCTAAAACAACTGCCAGACTTCCTGCAGAATAGACCGCACCTCGATTTGACGTGGATACCAATCGACCGTGAACGTAAGAGTGTGGAGAAGAGGGCTGTGTTATGGGCCATCTGCGCTCACGCACGGAATATAAGGGCCGCTCGTCTTTTTGTTGAGGGAGGGATCACGCAGGCGGAAAATGCTACAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

968

Amino Acids

110.14

Weight (kDa)

5.93

Isoelectric Point (pI)

43.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 95 9.7e-20 Rx N-terminal domain
NB-ARC PF00931 203 - 358 2.3e-32 NB-ARC domain
WHD_DRP PF23559 444 - 514 1.3e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 565 - 901 2.9e-26 Leucine-rich repeat region
LRR_8 PF13855 589 - 644 7.1e-06 Leucine rich repeat
LRR_R13L1-DRL21 PF25019 708 - 835 6e-33 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1713
AatII GACGTC 1 cut(s) 879
Acc65I GGTACC 1 cut(s) 459
AccB1I GGYRCC 2 cut(s) 459, 2369
AccBSI CCGCTC 1 cut(s) 2855
AccI GTMKAC 2 cut(s) 2050, 2056
AccII CGCG 1 cut(s) 1459
AciI CCGC 7 cut(s) 1152, 1459, 1932, 2681, 2750, 2853, 2888
AclWI GGATC 4 cut(s) 734, 792, 1942, 2885
AcoI YGGCCR 1 cut(s) 370
AcsI RAATTY 3 cut(s) 1656, 1777, 2335
AcuI CTGAAG 3 cut(s) 783, 957, 2132
AcyI GRCGYC 2 cut(s) 876, 1884
AfaI GTAC 8 cut(s) 144, 221, 237, 461, 568, 2018, 2069, 2310
AfiI CCNNNNNNNGG 4 cut(s) 2149, 2242, 2462, 2581
AflII CTTAAG 1 cut(s) 146
AflIII ACRYGT 1 cut(s) 1359
AgeI ACCGGT 1 cut(s) 462
AjiI CACGTC 2 cut(s) 751, 2766
AjuI GAANNNNNNNTTGG 2 cut(s) 2198, 2230
AleI CACNNNNGTG 1 cut(s) 2375
AluBI AGCT 7 cut(s) 140, 179, 205, 920, 1606, 2146, 2260
AluI AGCT 7 cut(s) 140, 179, 205, 920, 1606, 2146, 2260
Alw21I GWGCWC 1 cut(s) 1608
Alw26I GTCTC 3 cut(s) 739, 1857, 2385
AlwI GGATC 4 cut(s) 734, 792, 1942, 2885
Ama87I CYCGRG 1 cut(s) 2462
AoxI GGCC 5 cut(s) 9, 370, 617, 2820, 2850
ApaI GGGCCC 1 cut(s) 621
ApoI RAATTY 3 cut(s) 1656, 1777, 2335
ArsI GACNNNNNNTTYG 2 cut(s) 1762, 1794
AsiGI ACCGGT 1 cut(s) 462
Asp700I GAANNNNTTC 1 cut(s) 1391
Asp718I GGTACC 1 cut(s) 459
AspLEI GCGC 2 cut(s) 2286, 2831
AspS9I GGNCC 8 cut(s) 10, 617, 618, 865, 882, 1795, 2820, 2850
AsuC2I CCSGG 1 cut(s) 1555
AsuHPI GGTGA 8 cut(s) 85, 106, 308, 967, 1049, 1832, 2102, 2550
AvaI CYCGRG 1 cut(s) 2462
AvaII GGWCC 3 cut(s) 865, 882, 1795
BaeGI GKGCMC 1 cut(s) 621
BaeI ACNNNNGTAYC 2 cut(s) 443, 476
BalI TGGCCA 1 cut(s) 372
BanI GGYRCC 2 cut(s) 459, 2369
BanII GRGCYC 2 cut(s) 621, 1608
BarI GAAGNNNNNNTAC 2 cut(s) 418, 450
BbsI GAAGAC 2 cut(s) 1304, 2274
Bbv12I GWGCWC 1 cut(s) 1608
BbvCI CCTCAGC 2 cut(s) 6, 444
BccI CCATC 8 cut(s) 220, 637, 779, 806, 982, 1577, 2423, 2831
BceAI ACGGC 1 cut(s) 2116
BciVI GTATCC 1 cut(s) 2763
BclI TGATCA 1 cut(s) 753
BcnI CCSGG 1 cut(s) 1555
BcoDI GTCTC 3 cut(s) 739, 1857, 2385
BfaI CTAG 9 cut(s) 623, 677, 869, 1637, 1868, 2012, 2060, 2193, 2261
BfmI CTRYAG 2 cut(s) 1425, 2738
BfoI RGCGCY 1 cut(s) 2287
BfrI CTTAAG 1 cut(s) 146
BfuI GTATCC 1 cut(s) 2763
BglII AGATCT 1 cut(s) 2125
BisI GCNGC 3 cut(s) 1152, 2681, 2853
BlsI GCNGC 3 cut(s) 1153, 2682, 2854
BmcAI AGTACT 1 cut(s) 2018
Bme1390I CCNGG 1 cut(s) 1555
Bme18I GGWCC 3 cut(s) 865, 882, 1795
BmeT110I CYCGRG 1 cut(s) 2462
BmgBI CACGTC 2 cut(s) 751, 2766
BmgT120I GGNCC 8 cut(s) 10, 617, 618, 865, 882, 1795, 2820, 2850
BmiI GGNNCC 6 cut(s) 461, 618, 619, 620, 906, 2371
BmrFI CCNGG 1 cut(s) 1555
BmsI GCATC 8 cut(s) 660, 1301, 1506, 1993, 2179, 2640, 2692, 2709
BpiI GAAGAC 2 cut(s) 1304, 2274
Bpu10I CCTNAGC 2 cut(s) 6, 444
BpuMI CCSGG 1 cut(s) 1555
Bsa29I ATCGAT 2 cut(s) 1345, 2187
BsaAI YACGTR 2 cut(s) 2054, 2067
BsaBI GATNNNNATC 3 cut(s) 783, 2473, 2774
BsaHI GRCGYC 2 cut(s) 876, 1884
BsaJI CCNNGG 4 cut(s) 373, 1809, 1953, 2373
BsaWI WCCGGW 1 cut(s) 462
BsaXI ACNNNNNCTCC 2 cut(s) 2365, 2395
Bsc4I CCNNNNNNNGG 4 cut(s) 2149, 2242, 2462, 2581
Bse118I RCCGGY 1 cut(s) 462
Bse3DI GCAATG 2 cut(s) 396, 2110
Bse8I GATNNNNATC 3 cut(s) 783, 2473, 2774
BseCI ATCGAT 2 cut(s) 1345, 2187
BseDI CCNNGG 4 cut(s) 373, 1809, 1953, 2373
BseGI GGATG 4 cut(s) 94, 648, 817, 1383
BseJI GATNNNNATC 3 cut(s) 783, 2473, 2774
BseLI CCNNNNNNNGG 4 cut(s) 2149, 2242, 2462, 2581
BseMI GCAATG 2 cut(s) 396, 2110
BseMII CTCAG 6 cut(s) 29, 435, 750, 2105, 2216, 2286
BseRI GAGGAG 2 cut(s) 2294, 2448
BseSI GKGCMC 1 cut(s) 621
Bsh1236I CGCG 1 cut(s) 1459
Bsh1285I CGRYCG 1 cut(s) 2782
BshFI GGCC 5 cut(s) 11, 372, 619, 2822, 2852
BshNI GGYRCC 2 cut(s) 459, 2369
BshTI ACCGGT 1 cut(s) 462
BshVI ATCGAT 2 cut(s) 1345, 2187
BsiEI CGRYCG 1 cut(s) 2782
BsiHKAI GWGCWC 1 cut(s) 1608
BsiHKCI CYCGRG 1 cut(s) 2462
BsiSI CCGG 2 cut(s) 463, 1555
BsiWI CGTACG 1 cut(s) 219
BslI CCNNNNNNNGG 4 cut(s) 2149, 2242, 2462, 2581
BsmAI GTCTC 3 cut(s) 739, 1857, 2385
BsmI GAATGC 1 cut(s) 2320
BsnI GGCC 5 cut(s) 11, 372, 619, 2822, 2852
BsoBI CYCGRG 1 cut(s) 2462
Bsp120I GGGCCC 1 cut(s) 617
Bsp1286I GDGCHC 2 cut(s) 621, 1608
Bsp143I GATC 9 cut(s) 739, 753, 784, 1030, 1595, 1934, 2125, 2184, 2877
BspACI CCGC 7 cut(s) 1152, 1459, 1932, 2681, 2750, 2853, 2888
BspANI GGCC 5 cut(s) 11, 372, 619, 2822, 2852
BspCNI CTCAG 6 cut(s) 30, 436, 749, 2106, 2215, 2285
BspDI ATCGAT 2 cut(s) 1345, 2187
BspFNI CGCG 1 cut(s) 1459
BspLI GGNNCC 6 cut(s) 461, 618, 619, 620, 906, 2371
BspMAI CTGCAG 1 cut(s) 2742
BspPI GGATC 4 cut(s) 734, 792, 1942, 2885
BspT107I GGYRCC 2 cut(s) 459, 2369
BspTI CTTAAG 1 cut(s) 146
BsrBI CCGCTC 1 cut(s) 2855
BsrDI GCAATG 2 cut(s) 396, 2110
BsrFI RCCGGY 1 cut(s) 462
BssAI RCCGGY 1 cut(s) 462
BssECI CCNNGG 4 cut(s) 373, 1809, 1953, 2373
BssMI GATC 9 cut(s) 739, 753, 784, 1030, 1595, 1934, 2125, 2184, 2877
BssNAI GTATAC 1 cut(s) 2057
BssNI GRCGYC 2 cut(s) 876, 1884
BssT1I CCWWGG 3 cut(s) 373, 1809, 1953
Bst1107I GTATAC 1 cut(s) 2057
Bst4CI ACNGT 6 cut(s) 1266, 1827, 1865, 2074, 2377, 2783
Bst6I CTCTTC 5 cut(s) 155, 1233, 1412, 2271, 2798
BstACI GRCGYC 2 cut(s) 876, 1884
BstAFI CTTAAG 1 cut(s) 146
BstAPI GCANNNNNTGC 1 cut(s) 2650
BstBAI YACGTR 2 cut(s) 2054, 2067
BstC8I GCNNGC 3 cut(s) 2368, 2642, 2886
BstDSI CCRYGG 1 cut(s) 2373
BstEII GGTNACC 1 cut(s) 955
BstF5I GGATG 4 cut(s) 94, 648, 817, 1383
BstFNI CGCG 1 cut(s) 1459
BstH2I RGCGCY 1 cut(s) 2287
BstHHI GCGC 2 cut(s) 2286, 2831
BstKTI GATC 9 cut(s) 742, 756, 787, 1033, 1598, 1937, 2128, 2187, 2880
BstMAI GTCTC 3 cut(s) 739, 1857, 2385
BstMBI GATC 9 cut(s) 739, 753, 784, 1030, 1595, 1934, 2125, 2184, 2877
BstMCI CGRYCG 1 cut(s) 2782
BstMWI GCNNNNNNNGC 8 cut(s) 137, 677, 1586, 2198, 2207, 2650, 2828, 2894
BstNSI RCATGY 3 cut(s) 583, 1329, 2644
BstPI GGTNACC 1 cut(s) 955
BstSCI CCNGG 1 cut(s) 1553
BstSFI CTRYAG 2 cut(s) 1425, 2738
BstSLI GKGCMC 1 cut(s) 621
BstSNI TACGTA 2 cut(s) 2054, 2067
BstUI CGCG 1 cut(s) 1459
BstV2I GAAGAC 2 cut(s) 1304, 2274
BstX2I RGATCY 2 cut(s) 739, 2125
BstXI CCANNNNNNTGG 1 cut(s) 1960
BstYI RGATCY 2 cut(s) 739, 2125
BstZ17I GTATAC 1 cut(s) 2057
Bsu15I ATCGAT 2 cut(s) 1345, 2187
BsuI GTATCC 1 cut(s) 2763
BsuRI GGCC 5 cut(s) 11, 372, 619, 2822, 2852
BsuTUI ATCGAT 2 cut(s) 1345, 2187
BtgI CCRYGG 1 cut(s) 2373
BtgZI GCGATG 1 cut(s) 2313
BtrI CACGTC 2 cut(s) 751, 2766
BtsCI GGATG 4 cut(s) 94, 648, 817, 1383
BtsIMutI CAGTG 2 cut(s) 252, 2070
Cac8I GCNNGC 3 cut(s) 2368, 2642, 2886
CfoI GCGC 2 cut(s) 2286, 2831
Cfr10I RCCGGY 1 cut(s) 462
Cfr13I GGNCC 8 cut(s) 10, 617, 618, 865, 882, 1795, 2820, 2850
ClaI ATCGAT 2 cut(s) 1345, 2187
CseI GACGC 2 cut(s) 161, 1892
Csp6I GTAC 8 cut(s) 143, 220, 236, 460, 567, 2017, 2068, 2309
CspAI ACCGGT 1 cut(s) 462
CviQI GTAC 8 cut(s) 143, 220, 236, 460, 567, 2017, 2068, 2309
DpnI GATC 9 cut(s) 741, 755, 786, 1032, 1597, 1936, 2127, 2186, 2879
DpnII GATC 9 cut(s) 739, 753, 784, 1030, 1595, 1934, 2125, 2184, 2877
EaeI YGGCCR 1 cut(s) 370
Eam1104I CTCTTC 5 cut(s) 155, 1233, 1412, 2271, 2798
EarI CTCTTC 5 cut(s) 155, 1233, 1412, 2271, 2798
EciI GGCGGA 1 cut(s) 2903
Ecl136II GAGCTC 1 cut(s) 1606
Eco105I TACGTA 2 cut(s) 2054, 2067
Eco130I CCWWGG 3 cut(s) 373, 1809, 1953
Eco24I GRGCYC 2 cut(s) 621, 1608
Eco47I GGWCC 3 cut(s) 865, 882, 1795
Eco53kI GAGCTC 1 cut(s) 1606
Eco57I CTGAAG 3 cut(s) 783, 957, 2132
Eco88I CYCGRG 1 cut(s) 2462
Eco91I GGTNACC 1 cut(s) 955
EcoICRI GAGCTC 1 cut(s) 1606
EcoO109I RGGNCCY 3 cut(s) 10, 617, 618
EcoO65I GGTNACC 1 cut(s) 955
EcoT14I CCWWGG 3 cut(s) 373, 1809, 1953
EcoT22I ATGCAT 1 cut(s) 1521
EcoT38I GRGCYC 2 cut(s) 621, 1608
ErhI CCWWGG 3 cut(s) 373, 1809, 1953
FalI AAGNNNNNCTT 4 cut(s) 129, 161, 904, 936
FbaI TGATCA 1 cut(s) 753
FblI GTMKAC 2 cut(s) 2050, 2056
Fnu4HI GCNGC 3 cut(s) 1152, 2681, 2853
FokI GGATG 4 cut(s) 101, 655, 824, 1390
FriOI GRGCYC 2 cut(s) 621, 1608
Fsp4HI GCNGC 3 cut(s) 1152, 2681, 2853
FspBI CTAG 9 cut(s) 623, 677, 869, 1637, 1868, 2012, 2060, 2193, 2261
GlaI GCGC 2 cut(s) 2285, 2830
GluI GCNGC 3 cut(s) 1152, 2681, 2853
HaeII RGCGCY 1 cut(s) 2287
HaeIII GGCC 5 cut(s) 11, 372, 619, 2822, 2852
HapII CCGG 2 cut(s) 463, 1555
HgaI GACGC 2 cut(s) 161, 1892
HhaI GCGC 2 cut(s) 2286, 2831
Hin1I GRCGYC 2 cut(s) 876, 1884
Hin6I GCGC 2 cut(s) 2284, 2829
HinP1I GCGC 2 cut(s) 2284, 2829
HinfI GANTC 7 cut(s) 257, 836, 1347, 1562, 1722, 2270, 2705
HpaII CCGG 2 cut(s) 463, 1555
HphI GGTGA 8 cut(s) 85, 106, 308, 967, 1049, 1832, 2102, 2550
Hpy166II GTNNAC 6 cut(s) 114, 1823, 2051, 2057, 2070, 2786
Hpy8I GTNNAC 6 cut(s) 114, 1823, 2051, 2057, 2070, 2786
Hpy99I CGWCG 4 cut(s) 752, 878, 2099, 2102
HpyAV CCTTC 7 cut(s) 287, 691, 932, 2001, 2599, 2606, 2618
HpyCH4III ACNGT 6 cut(s) 1266, 1827, 1865, 2074, 2377, 2783
HpyF10VI GCNNNNNNNGC 8 cut(s) 137, 677, 1586, 2198, 2207, 2650, 2828, 2894
Hsp92I GRCGYC 2 cut(s) 876, 1884
HspAI GCGC 2 cut(s) 2284, 2829
KpnI GGTACC 1 cut(s) 463
Ksp22I TGATCA 1 cut(s) 753
Kzo9I GATC 9 cut(s) 739, 753, 784, 1030, 1595, 1934, 2125, 2184, 2877
LmnI GCTCC 2 cut(s) 992, 2281
LweI GCATC 8 cut(s) 660, 1301, 1506, 1993, 2179, 2640, 2692, 2709
MaeI CTAG 9 cut(s) 623, 677, 869, 1637, 1868, 2012, 2060, 2193, 2261
MaeIII GTNAC 6 cut(s) 955, 1380, 1453, 1827, 2090, 2563
MalI GATC 9 cut(s) 741, 755, 786, 1032, 1597, 1936, 2127, 2186, 2879
MbiI CCGCTC 1 cut(s) 2855
MboI GATC 9 cut(s) 739, 753, 784, 1030, 1595, 1934, 2125, 2184, 2877
MfeI CAATTG 2 cut(s) 1754, 2213
MflI RGATCY 2 cut(s) 739, 2125
MhlI GDGCHC 2 cut(s) 621, 1608
MlsI TGGCCA 1 cut(s) 372
MluNI TGGCCA 1 cut(s) 372
MlyI GAGTC 2 cut(s) 2264, 2714
MmeI TCCRAC 2 cut(s) 789, 2500
Mox20I TGGCCA 1 cut(s) 372
Mph1103I ATGCAT 1 cut(s) 1521
MroXI GAANNNNTTC 1 cut(s) 1391
MscI TGGCCA 1 cut(s) 372
MslI CAYNNNNRTG 6 cut(s) 20, 401, 1989, 2375, 2442, 2507
Msp20I TGGCCA 1 cut(s) 372
MspCI CTTAAG 1 cut(s) 146
MspI CCGG 2 cut(s) 463, 1555
MspR9I CCNGG 1 cut(s) 1555
MunI CAATTG 2 cut(s) 1754, 2213
Mva1269I GAATGC 1 cut(s) 2320
MvnI CGCG 1 cut(s) 1459
MwoI GCNNNNNNNGC 8 cut(s) 137, 677, 1586, 2198, 2207, 2650, 2828, 2894
NciI CCSGG 1 cut(s) 1555
NdeII GATC 9 cut(s) 739, 753, 784, 1030, 1595, 1934, 2125, 2184, 2877
NlaIV GGNNCC 6 cut(s) 461, 618, 619, 620, 906, 2371
NmuCI GTSAC 3 cut(s) 955, 1380, 2090
NsiI ATGCAT 1 cut(s) 1521
NspI RCATGY 3 cut(s) 583, 1329, 2644
OliI CACNNNNGTG 1 cut(s) 2375
PaeI GCATGC 1 cut(s) 2644
PcsI WCGNNNNNNNCGW 1 cut(s) 882
PctI GAATGC 1 cut(s) 2320
PdmI GAANNNNTTC 1 cut(s) 1391
PfeI GAWTC 5 cut(s) 257, 836, 1347, 1562, 1722
Pfl23II CGTACG 1 cut(s) 219
PflFI GACNNNGTC 1 cut(s) 875
PinAI ACCGGT 1 cut(s) 462
PkrI GCNGC 3 cut(s) 1153, 2682, 2854
PleI GAGTC 2 cut(s) 2264, 2713
PpsI GAGTC 2 cut(s) 2264, 2713
Ppu21I YACGTR 2 cut(s) 2054, 2067
PsiI TTATAA 1 cut(s) 1713
Psp124BI GAGCTC 1 cut(s) 1608
PspEI GGTNACC 1 cut(s) 955
PspLI CGTACG 1 cut(s) 219
PspN4I GGNNCC 6 cut(s) 461, 618, 619, 620, 906, 2371
PspOMI GGGCCC 1 cut(s) 617
PspPI GGNCC 8 cut(s) 10, 617, 618, 865, 882, 1795, 2820, 2850
PstI CTGCAG 1 cut(s) 2742
PsuI RGATCY 2 cut(s) 739, 2125
PsyI GACNNNGTC 1 cut(s) 875
RsaI GTAC 8 cut(s) 144, 221, 237, 461, 568, 2018, 2069, 2310
RsaNI GTAC 8 cut(s) 143, 220, 236, 460, 567, 2017, 2068, 2309
RseI CAYNNNNRTG 6 cut(s) 20, 401, 1989, 2375, 2442, 2507
SacI GAGCTC 1 cut(s) 1608
SatI GCNGC 3 cut(s) 1152, 2681, 2853
Sau3AI GATC 9 cut(s) 739, 753, 784, 1030, 1595, 1934, 2125, 2184, 2877
Sau96I GGNCC 8 cut(s) 10, 617, 618, 865, 882, 1795, 2820, 2850
ScaI AGTACT 1 cut(s) 2018
SchI GAGTC 2 cut(s) 2264, 2714
ScrFI CCNGG 1 cut(s) 1555
SduI GDGCHC 2 cut(s) 621, 1608
SfaNI GCATC 8 cut(s) 660, 1301, 1506, 1993, 2179, 2640, 2692, 2709
SfcI CTRYAG 2 cut(s) 1425, 2738
SinI GGWCC 3 cut(s) 865, 882, 1795
SmiMI CAYNNNNRTG 6 cut(s) 20, 401, 1989, 2375, 2442, 2507
SmlI CTYRAG 1 cut(s) 146
SmoI CTYRAG 1 cut(s) 146
SnaBI TACGTA 2 cut(s) 2054, 2067
SphI GCATGC 1 cut(s) 2644
SsiI CCGC 7 cut(s) 1152, 1459, 1932, 2681, 2750, 2853, 2888
SspI AATATT 2 cut(s) 951, 2345
SspMI CTAG 9 cut(s) 623, 677, 869, 1637, 1868, 2012, 2060, 2193, 2261
SstI GAGCTC 1 cut(s) 1608
StyD4I CCNGG 1 cut(s) 1553
StyI CCWWGG 3 cut(s) 373, 1809, 1953
TaaI ACNGT 6 cut(s) 1266, 1827, 1865, 2074, 2377, 2783
TaqII GACCGA 1 cut(s) 899
TatI WGTACW 2 cut(s) 142, 2016
TauI GCSGC 3 cut(s) 1154, 2683, 2855
TfiI GAWTC 5 cut(s) 257, 836, 1347, 1562, 1722
TscAI CASTG 2 cut(s) 259, 2077
TseFI GTSAC 3 cut(s) 955, 1380, 2090
Tsp45I GTSAC 3 cut(s) 955, 1380, 2090
TspGWI ACGGA 2 cut(s) 10, 2854
TspRI CASTG 2 cut(s) 259, 2077
Tth111I GACNNNGTC 1 cut(s) 875
Vha464I CTTAAG 1 cut(s) 146
VpaK11BI GGWCC 3 cut(s) 865, 882, 1795
XapI RAATTY 3 cut(s) 1656, 1777, 2335
XbaI TCTAGA 1 cut(s) 1867
XceI RCATGY 3 cut(s) 583, 1329, 2644
XmiI GTMKAC 2 cut(s) 2050, 2056
XmnI GAANNNNTTC 1 cut(s) 1391
XspI CTAG 9 cut(s) 623, 677, 869, 1637, 1868, 2012, 2060, 2193, 2261
ZraI GACGTC 1 cut(s) 877
ZrmI AGTACT 1 cut(s) 2018
Zsp2I ATGCAT 1 cut(s) 1521
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.