pycom08g07680

disease resistance protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
6184180 .. 6187541
3362 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g07680.4

Sequence Viewer

Length: 2970 bp
ATGGCAGAGGCACTCATTTCCGTGCTTCTCGAACAACTGACTTCGGTAACTTACCAACACATTGGAGAAGAGGTGAAGCTGGTTTTGAATGCTAAGAAAGATGTTGATGCATTTGCTGCCAACCTTGAAGCGATTCGTGCTGTGCTTGAGGATGCGGAGCAAAGGCAAGTGAAGGAGGCCAACGTCAGAAATTGGCTGGAGAAGCTGAAAGATGTGTCGTACAAGATGGACAATGTGCTGGATGAGTGGAAGACTGAAATACTGAAACAACAAGTTGAGAAAGAAGAAGAGCATGGTGGAAGTACTTCTCTTGTTAATAATAAGAAGAAGAAGGCGGTATGTTTCTTTATTCCCTCCTCTTGCTTTTGTTTCGGCCAAGTCAGTCGGGTAATTCTTCGTCGTGACATTGCTCATAAGATCAAAAGTCTGAATGAAAATTTAGATGCGATTGCTAAGCAAAGAGAAACATATAACTTTCAATTCACAGAGAGAACGCCCACTGAACAACCCGAGCGAGAGAAAACTTCTTCTTTTGTTGATGAATCTATCATATTTGGTAGAGAACAACAAAAGGAAGTTTTGGTTGGCAAGTTGTTGACTGAGAGTAGTCAAGAAGAGAGGGGCCTCCTTGTCATCCCCATTGTCGGGATGGGAGGAATGGGGAAGACAACTCTGGCCCAATTGGCTTTTAACGATGAAAATGTTAAAGATTGTTTTGGGATGAGAATATGGGTTTGTGTTTCAGACCCTTTTGATGAGATGAAAATTGCTAAAGCCATCATTTCTGGTGCTAAAGCTGTCAGCCCAAATTCGGATGAGTTGGAAGATTTCTTTCAATGTATGTCTGAATCCATCAGGGGAAAGAAGTTTCTCCTTGTCCTAGATGATGTGTGGACTGAAGACCAAAGAAAGTGGGAGAAATTGAAGTTGCCATTAGTACAAAGTGGCGCCCATGGCAGTAGAATATTGGTGACCACTAGAAAACAGGTGGTTGCTGATATGGTGGGAGCTCCCACTCACACCATCAATTTGGAGAGGTTGAGCGAACAAAATTGTTTGTCAATATTCAACCATATGGCATTTTATAATAGGGATAAGGATGGTGTGTTGGAAGCCATTGGTGAAGAAATAGCAAAAAAGTGCAAGGGTTTGCCTCTTGCTGCAAAGACTCTGGGTAGTCTCATGCGTAACAAGAAAACGAGGAAAGAATGGCAAGAAGTTTTGAACAGTAAGATATGGGACTATGAAGAGGTTGAGCAACAAGTTTTCCAACCACTATTACTGAGTTATTTTGATTTGGCACCTGCGGTCAGACGATGCCTTCTATATTGTGTTATCTTTCCAAAAGATCATTTGATCTATAAAGATTATTTGATTGAGTTGTGGATGTCACAAGATTATCTCTATTTGAAAAAAGACAAGGAGAAGAAAATAATTGGCCAAAGGTTTTTCAATAACTTAGCAATGCGATCTTTCTTCCAAAACTTTGAAGAAGATGATCAAGGAAATATCTGGATGTGTAAAATGCATGATATTGTGCACGACTTTCTGCAGTATCTTACTCAGAATGAATGCTTTACAATGGAGGTTAAGGGTGGTAACGATACAATAGAGGCCTTGGGTGACAAGATCCGCCATTTGACCTTAATGCTTGCACCCGAGGGTCCACTCTCATGTGTTTCGTTTTCCAGCTGCGATCTACGTACTCTTGCAACTTTTGATTCAAAATTTAATGTTGTGGACTCAACTTTGATCTCGCAGTTGAAACATATTAGGACATTAAATTTGAGTGGTGGTTGTATTGAAGTGCTTCCGGAAGAGATAGGTGAATTGGTGCATCTGAGGTTCATTGATTTGTCTGACAATGATGGTTTGAAAAAGCTACCGAATGGGGTGTGTAATTTATACAATTTGCAGACGTTGCGCCTTCGCGAGTACGACGATGAAGCGTTCAAATTGGGAGATTTGAGAAACTTAGACCAACTTCGTGAACTCGGCATATATATTGATGGGGATGTGGAAGTTGCTGTGGGTGAGGGTGAGAAAGCATCACCCCTGGGGAACAAACAACAACTCTCAGAATTGGATATAATTTTTGAAGATCGGGAAGATGACGAGGGAAGAAGAAGCAGCAGTAGTGCAGAAACACTGAATTTTTTACGACCGCATCCAAATTTGGAATTTTTAAGAATTGAAGGGCATAATGGAAGCAGTGCCCCCAACTGGATTATGTCATTAAACAATTTGAGAGTTCTCAGCCTTAAGGAATGGAATGAATGTGAAGTTTTACCTCCTTTGGGAAAATTGCCGTCCCTCGAAACACTCTGGCTTTGGAGCATGAAAGGAGTAAAAAAGGTTGGAGTTGAGTTTCTGGGAATAGAAAAGGAAACGTCATCAGCATCATCATGCATTATATTCCCAAAATTGAAAACACTCGAATTTCTTGACATGAAGGCGTGGGAAGAGTGGAAAGGAGTGGAAGAGTGGAAGGAAGAGGATTCTCATATTACCATAATGCCATGCCTTTCTTCTTTACAGATTTGGGAGTGCCATCAGCTAAAAACACTGCCAGACTTCTTGCTGAAAACACCACTTCAGACACTTGAAATCAGATACTCTAAGAGTCTTGCACGAGGTTGCCGAGAAGGCAGAGGAAAGGAGTGGTCCAAGATTTCTCACATCCCCAAAATCACAATCAGGCCTGAATATTCTGATGATGAGGGCGAAGGCATAGTGGAAGCAGAGGATGATGTTGAGTTGCAGGAGAGGCCTTCCACTTCGGGTAATTTACATCAATGCGCTAATTTCAGGTTAGAGGATGGACGCAGGAGAGGAAGTGAGATGGAAAGGGAGACAAAGCTGCATGCATTACTAGAACCGGTGGTTGGCTGCTGCATTACAGATTTCATCGGAATCGTCTTTTCCTTTGCTTTCGGGCAGAATGAAGATCGTCTAGACTCTAAGACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

990

Amino Acids

113.13

Weight (kDa)

5.23

Isoelectric Point (pI)

45.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1086
AarI CACCTGC 1 cut(s) 1312
Acc36I ACCTGC 1 cut(s) 1312
AccB1I GGYRCC 2 cut(s) 947, 1300
AccII CGCG 1 cut(s) 1932
AccIII TCCGGA 1 cut(s) 1813
AciI CCGC 5 cut(s) 155, 335, 1307, 1633, 2165
AclWI GGATC 1 cut(s) 1624
AcoI YGGCCR 2 cut(s) 373, 1438
AcsI RAATTY 8 cut(s) 436, 808, 1727, 1783, 2152, 2173, 2180, 2438
AcuI CTGAAG 2 cut(s) 918, 2579
AcyI GRCGYC 1 cut(s) 948
AfaI GTAC 5 cut(s) 221, 304, 939, 1705, 1937
AfiI CCNNNNNNNGG 6 cut(s) 644, 645, 811, 2223, 2297, 2885
AflII CTTAAG 1 cut(s) 2261
AgeI ACCGGT 1 cut(s) 2878
AjnI CCWGG 1 cut(s) 2055
AjuI GAANNNNNNNTTGG 4 cut(s) 567, 599, 2868, 2900
AluBI AGCT 8 cut(s) 79, 205, 797, 1010, 1692, 1882, 2557, 2860
AluI AGCT 8 cut(s) 79, 205, 797, 1010, 1692, 1882, 2557, 2860
Alw21I GWGCWC 2 cut(s) 1012, 1542
Alw26I GTCTC 2 cut(s) 1184, 2846
Alw44I GTGCAC 1 cut(s) 1538
AlwI GGATC 1 cut(s) 1624
Ama87I CYCGRG 2 cut(s) 509, 1658
Aor13HI TCCGGA 1 cut(s) 1813
AoxI GGCC 8 cut(s) 177, 373, 622, 675, 1438, 1614, 2699, 2768
ApaLI GTGCAC 1 cut(s) 1538
ApeKI GCWGC 7 cut(s) 116, 1160, 1692, 2130, 2860, 2889, 2892
ApoI RAATTY 8 cut(s) 436, 808, 1727, 1783, 2152, 2173, 2180, 2438
ArsI GACNNNNNNTTYG 2 cut(s) 1768, 1800
AsiGI ACCGGT 1 cut(s) 2878
Asp700I GAANNNNTTC 3 cut(s) 132, 304, 1809
AspLEI GCGC 3 cut(s) 950, 1926, 2801
AspS9I GGNCC 4 cut(s) 622, 676, 1664, 2664
AsuHPI GGTGA 8 cut(s) 85, 982, 1133, 1634, 1838, 2043, 2045, 2051
AvaI CYCGRG 2 cut(s) 509, 1658
AvaII GGWCC 2 cut(s) 1664, 2664
BaeGI GKGCMC 2 cut(s) 1542, 2218
BalI TGGCCA 1 cut(s) 1440
BanI GGYRCC 2 cut(s) 947, 1300
BanII GRGCYC 1 cut(s) 1012
BauI CACGAG 1 cut(s) 2631
BbsI GAAGAC 3 cut(s) 257, 671, 906
Bbv12I GWGCWC 2 cut(s) 1012, 1542
BbvI GCAGC 7 cut(s) 103, 1147, 1679, 2142, 2847, 2876, 2879
BceAI ACGGC 1 cut(s) 2293
BciT130I CCWGG 1 cut(s) 2057
BclI TGATCA 1 cut(s) 1498
BcoDI GTCTC 2 cut(s) 1184, 2846
BfaI CTAG 4 cut(s) 881, 978, 2873, 2954
BfmI CTRYAG 1 cut(s) 1550
BfoI RGCGCY 1 cut(s) 951
BfrI CTTAAG 1 cut(s) 2261
BfuAI ACCTGC 1 cut(s) 1312
BglI GCCNNNNNGGC 2 cut(s) 683, 2646
BisI GCNGC 7 cut(s) 117, 1161, 1693, 2131, 2861, 2890, 2893
BlpI GCTNAGC 1 cut(s) 453
BlsI GCNGC 7 cut(s) 118, 1162, 1694, 2132, 2862, 2891, 2894
BmcAI AGTACT 1 cut(s) 304
Bme1390I CCNGG 1 cut(s) 2057
Bme18I GGWCC 2 cut(s) 1664, 2664
BmeT110I CYCGRG 2 cut(s) 509, 1658
BmgT120I GGNCC 4 cut(s) 622, 676, 1664, 2664
BmiI GGNNCC 4 cut(s) 623, 949, 1302, 1665
BmrFI CCNGG 1 cut(s) 2057
BmsI GCATC 8 cut(s) 97, 142, 433, 1307, 1846, 2057, 2176, 2408
BpiI GAAGAC 3 cut(s) 257, 671, 906
BpmI CTGGAG 1 cut(s) 218
Bpu1102I GCTNAGC 1 cut(s) 453
BpuEI CTTGAG 1 cut(s) 167
BsaAI YACGTR 1 cut(s) 1703
BsaHI GRCGYC 1 cut(s) 948
BsaJI CCNNGG 5 cut(s) 952, 1617, 1659, 2055, 2056
BsaWI WCCGGW 2 cut(s) 1813, 2878
BsaXI ACNNNNNCTCC 4 cut(s) 57, 87, 2821, 2851
Bsc4I CCNNNNNNNGG 6 cut(s) 644, 645, 811, 2223, 2297, 2885
Bse118I RCCGGY 1 cut(s) 2878
Bse1I ACTGG 1 cut(s) 2228
Bse3DI GCAATG 2 cut(s) 405, 1470
BseAI TCCGGA 1 cut(s) 1813
BseBI CCWGG 1 cut(s) 2057
BseDI CCNNGG 5 cut(s) 952, 1617, 1659, 2055, 2056
BseLI CCNNNNNNNGG 6 cut(s) 644, 645, 811, 2223, 2297, 2885
BseMI GCAATG 2 cut(s) 405, 1470
BseMII CTCAG 6 cut(s) 591, 1274, 1577, 1832, 2091, 2269
BseNI ACTGG 1 cut(s) 2228
BseRI GAGGAG 1 cut(s) 346
BseSI GKGCMC 2 cut(s) 1542, 2218
BseXI GCAGC 7 cut(s) 103, 1147, 1679, 2142, 2847, 2876, 2879
BsgI GTGCAG 1 cut(s) 2160
Bsh1236I CGCG 1 cut(s) 1932
Bsh1285I CGRYCG 1 cut(s) 2165
BshFI GGCC 8 cut(s) 179, 375, 624, 677, 1440, 1616, 2701, 2770
BshNI GGYRCC 2 cut(s) 947, 1300
BshTI ACCGGT 1 cut(s) 2878
BsiEI CGRYCG 1 cut(s) 2165
BsiHKAI GWGCWC 2 cut(s) 1012, 1542
BsiHKCI CYCGRG 2 cut(s) 509, 1658
BsiSI CCGG 2 cut(s) 1814, 2879
BslFI GGGAC 2 cut(s) 1253, 2296
BslI CCNNNNNNNGG 6 cut(s) 644, 645, 811, 2223, 2297, 2885
BsmAI GTCTC 2 cut(s) 1184, 2846
BsmFI GGGAC 2 cut(s) 1253, 2296
BsmI GAATGC 2 cut(s) 94, 1577
BsnI GGCC 8 cut(s) 179, 375, 624, 677, 1440, 1616, 2701, 2770
BsoBI CYCGRG 2 cut(s) 509, 1658
Bsp1286I GDGCHC 3 cut(s) 1012, 1542, 2218
Bsp13I TCCGGA 1 cut(s) 1813
Bsp1720I GCTNAGC 1 cut(s) 453
Bsp19I CCATGG 1 cut(s) 952
Bsp68I TCGCGA 1 cut(s) 1932
BspACI CCGC 5 cut(s) 155, 335, 1307, 1633, 2165
BspANI GGCC 8 cut(s) 179, 375, 624, 677, 1440, 1616, 2701, 2770
BspCNI CTCAG 6 cut(s) 592, 1275, 1576, 1833, 2090, 2268
BspEI TCCGGA 1 cut(s) 1813
BspFNI CGCG 1 cut(s) 1932
BspLI GGNNCC 4 cut(s) 623, 949, 1302, 1665
BspMAI CTGCAG 1 cut(s) 1554
BspMI ACCTGC 1 cut(s) 1312
BspPI GGATC 1 cut(s) 1624
BspQI GCTCTTC 1 cut(s) 282
BspT107I GGYRCC 2 cut(s) 947, 1300
BspTI CTTAAG 1 cut(s) 2261
BsrDI GCAATG 2 cut(s) 405, 1470
BsrFI RCCGGY 1 cut(s) 2878
BsrI ACTGG 1 cut(s) 2228
BssAI RCCGGY 1 cut(s) 2878
BssECI CCNNGG 5 cut(s) 952, 1617, 1659, 2055, 2056
BssNI GRCGYC 1 cut(s) 948
BssSI CACGAG 1 cut(s) 2631
BssT1I CCWWGG 2 cut(s) 952, 1617
Bst2BI CACGAG 1 cut(s) 2631
Bst2UI CCWGG 1 cut(s) 2057
Bst4CI ACNGT 1 cut(s) 1229
Bst6I CTCTTC 8 cut(s) 63, 282, 609, 1242, 1812, 2457, 2475, 2487
BstACI GRCGYC 1 cut(s) 948
BstAFI CTTAAG 1 cut(s) 2261
BstAPI GCANNNNNTGC 2 cut(s) 116, 1921
BstBAI YACGTR 1 cut(s) 1703
BstC8I GCNNGC 2 cut(s) 1653, 2865
BstDSI CCRYGG 1 cut(s) 952
BstEII GGTNACC 1 cut(s) 970
BstFNI CGCG 1 cut(s) 1932
BstH2I RGCGCY 1 cut(s) 951
BstHHI GCGC 3 cut(s) 950, 1926, 2801
BstMAI GTCTC 2 cut(s) 1184, 2846
BstMCI CGRYCG 1 cut(s) 2165
BstMWI GCNNNNNNNGC 8 cut(s) 116, 137, 202, 683, 954, 1921, 2646, 2767
BstNI CCWGG 1 cut(s) 2057
BstNSI RCATGY 1 cut(s) 2867
BstPI GGTNACC 1 cut(s) 970
BstSCI CCNGG 1 cut(s) 2055
BstSFI CTRYAG 1 cut(s) 1550
BstSLI GKGCMC 2 cut(s) 1542, 2218
BstSNI TACGTA 1 cut(s) 1703
BstUI CGCG 1 cut(s) 1932
BstV1I GCAGC 7 cut(s) 103, 1147, 1679, 2142, 2847, 2876, 2879
BstV2I GAAGAC 3 cut(s) 257, 671, 906
BstX2I RGATCY 1 cut(s) 1629
BstXI CCANNNNNNTGG 2 cut(s) 62, 1030
BstYI RGATCY 1 cut(s) 1629
BsuRI GGCC 8 cut(s) 179, 375, 624, 677, 1440, 1616, 2701, 2770
BtgI CCRYGG 1 cut(s) 952
BtsI GCAGTG 2 cut(s) 2218, 2564
BtsIMutI CAGTG 4 cut(s) 498, 2147, 2218, 2564
BtuMI TCGCGA 1 cut(s) 1932
BveI ACCTGC 1 cut(s) 1312
Cac8I GCNNGC 2 cut(s) 1653, 2865
CfoI GCGC 3 cut(s) 950, 1926, 2801
Cfr10I RCCGGY 1 cut(s) 2878
Cfr13I GGNCC 4 cut(s) 622, 676, 1664, 2664
CseI GACGC 1 cut(s) 2832
Csp6I GTAC 5 cut(s) 220, 303, 938, 1704, 1936
CspAI ACCGGT 1 cut(s) 2878
CspCI CAANNNNNGTGG 2 cut(s) 893, 928
CviQI GTAC 5 cut(s) 220, 303, 938, 1704, 1936
DinI GGCGCC 1 cut(s) 949
EaeI YGGCCR 2 cut(s) 373, 1438
Eam1104I CTCTTC 8 cut(s) 63, 282, 609, 1242, 1812, 2457, 2475, 2487
EarI CTCTTC 8 cut(s) 63, 282, 609, 1242, 1812, 2457, 2475, 2487
EciI GGCGGA 1 cut(s) 1622
Ecl136II GAGCTC 1 cut(s) 1010
Eco105I TACGTA 1 cut(s) 1703
Eco130I CCWWGG 2 cut(s) 952, 1617
Eco147I AGGCCT 3 cut(s) 1616, 2701, 2770
Eco24I GRGCYC 1 cut(s) 1012
Eco47I GGWCC 2 cut(s) 1664, 2664
Eco53kI GAGCTC 1 cut(s) 1010
Eco57I CTGAAG 2 cut(s) 918, 2579
Eco88I CYCGRG 2 cut(s) 509, 1658
Eco91I GGTNACC 1 cut(s) 970
EcoICRI GAGCTC 1 cut(s) 1010
EcoO109I RGGNCCY 1 cut(s) 622
EcoO65I GGTNACC 1 cut(s) 970
EcoRII CCWGG 1 cut(s) 2055
EcoT14I CCWWGG 2 cut(s) 952, 1617
EcoT22I ATGCAT 4 cut(s) 112, 1530, 2411, 2869
EcoT38I GRGCYC 1 cut(s) 1012
EgeI GGCGCC 1 cut(s) 949
EheI GGCGCC 1 cut(s) 949
ErhI CCWWGG 2 cut(s) 952, 1617
FaqI GGGAC 2 cut(s) 1253, 2296
FauNDI CATATG 1 cut(s) 1074
FbaI TGATCA 1 cut(s) 1498
Fnu4HI GCNGC 7 cut(s) 117, 1161, 1693, 2131, 2861, 2890, 2893
FriOI GRGCYC 1 cut(s) 1012
Fsp4HI GCNGC 7 cut(s) 117, 1161, 1693, 2131, 2861, 2890, 2893
FspBI CTAG 4 cut(s) 881, 978, 2873, 2954
GlaI GCGC 3 cut(s) 949, 1925, 2800
GluI GCNGC 7 cut(s) 117, 1161, 1693, 2131, 2861, 2890, 2893
GsuI CTGGAG 1 cut(s) 218
HaeII RGCGCY 1 cut(s) 951
HaeIII GGCC 8 cut(s) 179, 375, 624, 677, 1440, 1616, 2701, 2770
HapII CCGG 2 cut(s) 1814, 2879
HgaI GACGC 1 cut(s) 2832
HhaI GCGC 3 cut(s) 950, 1926, 2801
Hin1I GRCGYC 1 cut(s) 948
Hin6I GCGC 3 cut(s) 948, 1924, 2799
HinP1I GCGC 3 cut(s) 948, 1924, 2799
HincII GTYRAC 1 cut(s) 597
HindII GTYRAC 1 cut(s) 597
HpaII CCGG 2 cut(s) 1814, 2879
HphI GGTGA 8 cut(s) 85, 982, 1133, 1634, 1838, 2043, 2045, 2051
Hpy166II GTNNAC 6 cut(s) 597, 894, 1540, 1667, 1741, 1991
Hpy8I GTNNAC 6 cut(s) 597, 894, 1540, 1667, 1741, 1991
Hpy99I CGWCG 2 cut(s) 402, 1943
HpyCH4III ACNGT 1 cut(s) 1229
HpyCH4IV ACGT 4 cut(s) 183, 1702, 1919, 2390
HpyF10VI GCNNNNNNNGC 8 cut(s) 116, 137, 202, 683, 954, 1921, 2646, 2767
HpySE526I ACGT 4 cut(s) 183, 1702, 1919, 2390
Hsp92I GRCGYC 1 cut(s) 948
HspAI GCGC 3 cut(s) 948, 1924, 2799
KasI GGCGCC 1 cut(s) 947
Kpn2I TCCGGA 1 cut(s) 1813
Ksp22I TGATCA 1 cut(s) 1498
LguI GCTCTTC 1 cut(s) 282
LmnI GCTCC 4 cut(s) 157, 1007, 1015, 2334
Lsp1109I GCAGC 7 cut(s) 103, 1147, 1679, 2142, 2847, 2876, 2879
LweI GCATC 8 cut(s) 97, 142, 433, 1307, 1846, 2057, 2176, 2408
MaeI CTAG 4 cut(s) 881, 978, 2873, 2954
MaeII ACGT 4 cut(s) 183, 1702, 1919, 2390
MaeIII GTNAC 7 cut(s) 46, 401, 970, 1187, 1389, 1598, 1622
MfeI CAATTG 1 cut(s) 680
MflI RGATCY 1 cut(s) 1629
MhlI GDGCHC 3 cut(s) 1012, 1542, 2218
MlsI TGGCCA 1 cut(s) 1440
MluNI TGGCCA 1 cut(s) 1440
Mly113I GGCGCC 1 cut(s) 948
MlyI GAGTC 4 cut(s) 1162, 1736, 2632, 2951
MmeI TCCRAC 4 cut(s) 801, 1089, 1294, 2338
Mox20I TGGCCA 1 cut(s) 1440
Mph1103I ATGCAT 4 cut(s) 112, 1530, 2411, 2869
MroI TCCGGA 1 cut(s) 1813
MroXI GAANNNNTTC 3 cut(s) 132, 304, 1809
MscI TGGCCA 1 cut(s) 1440
MslI CAYNNNNRTG 3 cut(s) 20, 1672, 2404
Msp20I TGGCCA 1 cut(s) 1440
MspA1I CMGCKG 1 cut(s) 1692
MspCI CTTAAG 1 cut(s) 2261
MspI CCGG 2 cut(s) 1814, 2879
MspR9I CCNGG 1 cut(s) 2057
MunI CAATTG 1 cut(s) 680
Mva1269I GAATGC 2 cut(s) 94, 1577
MvaI CCWGG 1 cut(s) 2057
MvnI CGCG 1 cut(s) 1932
MwoI GCNNNNNNNGC 8 cut(s) 116, 137, 202, 683, 954, 1921, 2646, 2767
NarI GGCGCC 1 cut(s) 948
NcoI CCATGG 1 cut(s) 952
NdeI CATATG 1 cut(s) 1074
NlaIV GGNNCC 4 cut(s) 623, 949, 1302, 1665
NmeAIII GCCGAG 2 cut(s) 1974, 2666
NmuCI GTSAC 4 cut(s) 401, 970, 1389, 1622
NruI TCGCGA 1 cut(s) 1932
NsiI ATGCAT 4 cut(s) 112, 1530, 2411, 2869
NspI RCATGY 1 cut(s) 2867
PaeI GCATGC 1 cut(s) 2867
PaqCI CACCTGC 1 cut(s) 1312
PasI CCCWGGG 1 cut(s) 2056
PceI AGGCCT 3 cut(s) 1616, 2701, 2770
PciSI GCTCTTC 1 cut(s) 282
PcsI WCGNNNNNNNCGW 1 cut(s) 2638
PctI GAATGC 2 cut(s) 94, 1577
PdmI GAANNNNTTC 3 cut(s) 132, 304, 1809
PfeI GAWTC 6 cut(s) 133, 542, 848, 1721, 2498, 2913
PinAI ACCGGT 1 cut(s) 2878
PkrI GCNGC 7 cut(s) 118, 1162, 1694, 2132, 2862, 2891, 2894
PleI GAGTC 4 cut(s) 1162, 1736, 2631, 2951
PluTI GGCGCC 1 cut(s) 951
PpsI GAGTC 4 cut(s) 1162, 1736, 2631, 2951
Ppu21I YACGTR 1 cut(s) 1703
PsiI TTATAA 1 cut(s) 1086
Psp124BI GAGCTC 1 cut(s) 1012
Psp6I CCWGG 1 cut(s) 2055
PspEI GGTNACC 1 cut(s) 970
PspGI CCWGG 1 cut(s) 2055
PspN4I GGNNCC 4 cut(s) 623, 949, 1302, 1665
PspPI GGNCC 4 cut(s) 622, 676, 1664, 2664
PstI CTGCAG 1 cut(s) 1554
PsuI RGATCY 1 cut(s) 1629
PvuII CAGCTG 1 cut(s) 1692
RruI TCGCGA 1 cut(s) 1932
RsaI GTAC 5 cut(s) 221, 304, 939, 1705, 1937
RsaNI GTAC 5 cut(s) 220, 303, 938, 1704, 1936
RseI CAYNNNNRTG 3 cut(s) 20, 1672, 2404
SacI GAGCTC 1 cut(s) 1012
SapI GCTCTTC 1 cut(s) 282
SatI GCNGC 7 cut(s) 117, 1161, 1693, 2131, 2861, 2890, 2893
Sau96I GGNCC 4 cut(s) 622, 676, 1664, 2664
ScaI AGTACT 1 cut(s) 304
SchI GAGTC 4 cut(s) 1162, 1736, 2632, 2951
ScrFI CCNGG 1 cut(s) 2057
SduI GDGCHC 3 cut(s) 1012, 1542, 2218
SfaNI GCATC 8 cut(s) 97, 142, 433, 1307, 1846, 2057, 2176, 2408
SfcI CTRYAG 1 cut(s) 1550
SfoI GGCGCC 1 cut(s) 949
SinI GGWCC 2 cut(s) 1664, 2664
SmiMI CAYNNNNRTG 3 cut(s) 20, 1672, 2404
SmlI CTYRAG 2 cut(s) 146, 2261
SmoI CTYRAG 2 cut(s) 146, 2261
SnaBI TACGTA 1 cut(s) 1703
SphI GCATGC 1 cut(s) 2867
SseBI AGGCCT 3 cut(s) 1616, 2701, 2770
SsiI CCGC 5 cut(s) 155, 335, 1307, 1633, 2165
SspDI GGCGCC 1 cut(s) 947
SspI AATATT 3 cut(s) 966, 1065, 2708
SspMI CTAG 4 cut(s) 881, 978, 2873, 2954
SstI GAGCTC 1 cut(s) 1012
StuI AGGCCT 3 cut(s) 1616, 2701, 2770
StyD4I CCNGG 1 cut(s) 2055
StyI CCWWGG 2 cut(s) 952, 1617
TaaI ACNGT 1 cut(s) 1229
TaiI ACGT 4 cut(s) 186, 1705, 1922, 2393
TaqI TCGA 3 cut(s) 30, 2316, 2436
TatI WGTACW 2 cut(s) 302, 937
TfiI GAWTC 6 cut(s) 133, 542, 848, 1721, 2498, 2913
TscAI CASTG 4 cut(s) 505, 2154, 2218, 2571
TseFI GTSAC 4 cut(s) 401, 970, 1389, 1622
TseI GCWGC 7 cut(s) 116, 1160, 1692, 2130, 2860, 2889, 2892
Tsp45I GTSAC 4 cut(s) 401, 970, 1389, 1622
TspGWI ACGGA 1 cut(s) 10
TspRI CASTG 4 cut(s) 505, 2154, 2218, 2571
Vha464I CTTAAG 1 cut(s) 2261
VneI GTGCAC 1 cut(s) 1538
VpaK11BI GGWCC 2 cut(s) 1664, 2664
XapI RAATTY 8 cut(s) 436, 808, 1727, 1783, 2152, 2173, 2180, 2438
XbaI TCTAGA 1 cut(s) 2953
XceI RCATGY 1 cut(s) 2867
XcmI CCANNNNNNNNNTGG 1 cut(s) 646
XmnI GAANNNNTTC 3 cut(s) 132, 304, 1809
XspI CTAG 4 cut(s) 881, 978, 2873, 2954
ZrmI AGTACT 1 cut(s) 304
Zsp2I ATGCAT 4 cut(s) 112, 1530, 2411, 2869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.