disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 5 - 96 | 3.1e-22 | Rx N-terminal domain |
| NB-ARC | PF00931 | 202 - 362 | 7.2e-37 | NB-ARC domain |
| WHD_DRP | PF23559 | 447 - 518 | 5.1e-21 | Disease resistance protein Winged helix domain |
| LRR_8 | PF13855 | 568 - 625 | 8.6e-07 | Leucine rich repeat |
| LRR_14 | PF23598 | 569 - 902 | 8.5e-35 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 593 - 647 | 1.8e-06 | Leucine rich repeat |
| LRR_4 | PF12799 | 593 - 630 | 2.9e-06 | Leucine Rich repeats (2 copies) |
| LRR_R13L1-DRL21 | PF25019 | 702 - 829 | 1e-24 | R13L1/DRL21 LRRs |
| LRR_RPS2 | PF23247 | 772 - 909 | 4.2e-06 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 468 |
| Acc16I | TGCGCA | 1 cut(s) | 2790 |
| Acc36I | ACCTGC | 1 cut(s) | 2610 |
| AccB1I | GGYRCC | 2 cut(s) | 2174, 2342 |
| AccBSI | CCGCTC | 1 cut(s) | 2752 |
| AccI | GTMKAC | 5 cut(s) | 531, 681, 838, 2056, 2598 |
| AciI | CCGC | 3 cut(s) | 1277, 1990, 2750 |
| AclWI | GGATC | 4 cut(s) | 382, 789, 1185, 2130 |
| AcoI | YGGCCR | 2 cut(s) | 370, 1080 |
| AcsI | RAATTY | 8 cut(s) | 258, 805, 1449, 1702, 1858, 2423, 2475, 2758 |
| AcuI | CTGAAG | 5 cut(s) | 588, 2042, 2114, 2600, 2738 |
| AcyI | GRCGYC | 1 cut(s) | 2747 |
| AdeI | CACNNNGTG | 2 cut(s) | 1899, 2352 |
| AfaI | GTAC | 5 cut(s) | 221, 307, 348, 2469, 2871 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 186, 638, 1989, 2311 |
| AjiI | CACGTC | 1 cut(s) | 235 |
| AjnI | CCWGG | 1 cut(s) | 2271 |
| AleI | CACNNNNGTG | 1 cut(s) | 396 |
| Alw21I | GWGCWC | 3 cut(s) | 147, 1548, 2706 |
| Alw26I | GTCTC | 2 cut(s) | 1748, 2871 |
| Alw44I | GTGCAC | 1 cut(s) | 1544 |
| AlwI | GGATC | 4 cut(s) | 382, 789, 1185, 2130 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 192 |
| Ama87I | CYCGRG | 1 cut(s) | 146 |
| AoxI | GGCC | 8 cut(s) | 370, 856, 1080, 1302, 1593, 1965, 2246, 2822 |
| ApaLI | GTGCAC | 1 cut(s) | 1544 |
| ApeKI | GCWGC | 3 cut(s) | 1658, 2409, 2633 |
| ApoI | RAATTY | 8 cut(s) | 258, 805, 1449, 1702, 1858, 2423, 2475, 2758 |
| AseI | ATTAAT | 1 cut(s) | 2184 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 573, 1815, 2427 |
| AspLEI | GCGC | 1 cut(s) | 2791 |
| AspS9I | GGNCC | 6 cut(s) | 856, 1303, 1710, 1782, 2373, 2823 |
| AsuHPI | GGTGA | 7 cut(s) | 85, 106, 275, 308, 976, 1613, 2653 |
| AvaI | CYCGRG | 1 cut(s) | 146 |
| AvaII | GGWCC | 3 cut(s) | 1710, 1782, 2373 |
| AxyI | CCTNAGG | 2 cut(s) | 1778, 1962 |
| BaeGI | GKGCMC | 2 cut(s) | 1548, 2357 |
| BalI | TGGCCA | 1 cut(s) | 372 |
| BanI | GGYRCC | 2 cut(s) | 2174, 2342 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 298, 330 |
| BbsI | GAAGAC | 4 cut(s) | 665, 1941, 2726, 2750 |
| Bbv12I | GWGCWC | 3 cut(s) | 147, 1548, 2706 |
| BbvI | GCAGC | 3 cut(s) | 1645, 2396, 2645 |
| BccI | CCATC | 7 cut(s) | 188, 220, 637, 670, 1658, 2084, 2165 |
| BceAI | ACGGC | 2 cut(s) | 1580, 1671 |
| BciT130I | CCWGG | 1 cut(s) | 2273 |
| BclI | TGATCA | 2 cut(s) | 1669, 1908 |
| BcoDI | GTCTC | 2 cut(s) | 1748, 2871 |
| BfaI | CTAG | 6 cut(s) | 197, 354, 450, 878, 2066, 2438 |
| BfmI | CTRYAG | 3 cut(s) | 633, 901, 2057 |
| BfuAI | ACCTGC | 1 cut(s) | 2610 |
| BglII | AGATCT | 2 cut(s) | 1945, 2829 |
| BisI | GCNGC | 5 cut(s) | 1659, 1991, 2410, 2634, 2750 |
| BlsI | GCNGC | 5 cut(s) | 1660, 1992, 2411, 2635, 2751 |
| BmcAI | AGTACT | 2 cut(s) | 307, 2469 |
| Bme1390I | CCNGG | 1 cut(s) | 2273 |
| Bme18I | GGWCC | 3 cut(s) | 1710, 1782, 2373 |
| BmeT110I | CYCGRG | 1 cut(s) | 146 |
| BmgBI | CACGTC | 1 cut(s) | 235 |
| BmgT120I | GGNCC | 6 cut(s) | 856, 1303, 1710, 1782, 2373, 2823 |
| BmiI | GGNNCC | 4 cut(s) | 1305, 1712, 2176, 2344 |
| BmrFI | CCNGG | 1 cut(s) | 2273 |
| BmsI | GCATC | 5 cut(s) | 142, 787, 1521, 2002, 2775 |
| BpiI | GAAGAC | 4 cut(s) | 665, 1941, 2726, 2750 |
| BpuEI | CTTGAG | 5 cut(s) | 524, 1813, 1867, 1945, 2738 |
| BsaHI | GRCGYC | 1 cut(s) | 2747 |
| BsaJI | CCNNGG | 1 cut(s) | 1968 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1645, 1675 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 186, 638, 1989, 2311 |
| Bse1I | ACTGG | 4 cut(s) | 42, 197, 251, 2366 |
| Bse21I | CCTNAGG | 2 cut(s) | 1778, 1962 |
| Bse3DI | GCAATG | 2 cut(s) | 402, 1071 |
| BseBI | CCWGG | 1 cut(s) | 2273 |
| BseDI | CCNNGG | 1 cut(s) | 1968 |
| BseGI | GGATG | 7 cut(s) | 157, 648, 1255, 2370, 2534, 2838, 2847 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 186, 638, 1989, 2311 |
| BseMI | GCAATG | 2 cut(s) | 402, 1071 |
| BseMII | CTCAG | 4 cut(s) | 416, 569, 1277, 1953 |
| BseNI | ACTGG | 4 cut(s) | 42, 197, 251, 2366 |
| BseRI | GAGGAG | 1 cut(s) | 2823 |
| BseSI | GKGCMC | 2 cut(s) | 1548, 2357 |
| BseXI | GCAGC | 3 cut(s) | 1645, 2396, 2645 |
| BseYI | CCCAGC | 1 cut(s) | 2636 |
| BshFI | GGCC | 8 cut(s) | 372, 858, 1082, 1304, 1595, 1967, 2248, 2824 |
| BshNI | GGYRCC | 2 cut(s) | 2174, 2342 |
| BsiHKAI | GWGCWC | 3 cut(s) | 147, 1548, 2706 |
| BsiHKCI | CYCGRG | 1 cut(s) | 146 |
| BsiSI | CCGG | 1 cut(s) | 2606 |
| BsiWI | CGTACG | 1 cut(s) | 219 |
| BslFI | GGGAC | 1 cut(s) | 203 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 186, 638, 1989, 2311 |
| BsmAI | GTCTC | 2 cut(s) | 1748, 2871 |
| BsmBI | CGTCTC | 1 cut(s) | 2871 |
| BsmFI | GGGAC | 1 cut(s) | 203 |
| BsmI | GAATGC | 1 cut(s) | 2293 |
| BsnI | GGCC | 8 cut(s) | 372, 858, 1082, 1304, 1595, 1967, 2248, 2824 |
| BsoBI | CYCGRG | 1 cut(s) | 146 |
| Bsp1286I | GDGCHC | 4 cut(s) | 147, 1548, 2357, 2706 |
| Bsp1407I | TGTACA | 1 cut(s) | 2869 |
| Bsp19I | CCATGG | 1 cut(s) | 1968 |
| BspACI | CCGC | 3 cut(s) | 1277, 1990, 2750 |
| BspANI | GGCC | 8 cut(s) | 372, 858, 1082, 1304, 1595, 1967, 2248, 2824 |
| BspCNI | CTCAG | 4 cut(s) | 417, 570, 1278, 1954 |
| BspLI | GGNNCC | 4 cut(s) | 1305, 1712, 2176, 2344 |
| BspMI | ACCTGC | 1 cut(s) | 2610 |
| BspPI | GGATC | 4 cut(s) | 382, 789, 1185, 2130 |
| BspT107I | GGYRCC | 2 cut(s) | 2174, 2342 |
| BsrBI | CCGCTC | 1 cut(s) | 2752 |
| BsrDI | GCAATG | 2 cut(s) | 402, 1071 |
| BsrGI | TGTACA | 1 cut(s) | 2869 |
| BsrI | ACTGG | 4 cut(s) | 42, 197, 251, 2366 |
| BssECI | CCNNGG | 1 cut(s) | 1968 |
| BssNAI | GTATAC | 1 cut(s) | 839 |
| BssNI | GRCGYC | 1 cut(s) | 2747 |
| BssT1I | CCWWGG | 1 cut(s) | 1968 |
| Bst1107I | GTATAC | 1 cut(s) | 839 |
| Bst2UI | CCWGG | 1 cut(s) | 2273 |
| Bst4CI | ACNGT | 9 cut(s) | 395, 793, 918, 1047, 1445, 1580, 2339, 2708, 2861 |
| Bst6I | CTCTTC | 4 cut(s) | 155, 603, 1947, 2439 |
| BstACI | GRCGYC | 1 cut(s) | 2747 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1010 |
| BstAUI | TGTACA | 1 cut(s) | 2869 |
| BstC8I | GCNNGC | 1 cut(s) | 2250 |
| BstDEI | CTNAG | 7 cut(s) | 425, 578, 1286, 1406, 1778, 1962, 2237 |
| BstDSI | CCRYGG | 1 cut(s) | 1968 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 636 |
| BstF5I | GGATG | 7 cut(s) | 157, 648, 1255, 2370, 2534, 2838, 2847 |
| BstHHI | GCGC | 1 cut(s) | 2791 |
| BstMAI | GTCTC | 2 cut(s) | 1748, 2871 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 137, 202, 1010 |
| BstNI | CCWGG | 1 cut(s) | 2273 |
| BstSCI | CCNGG | 1 cut(s) | 2271 |
| BstSFI | CTRYAG | 3 cut(s) | 633, 901, 2057 |
| BstSLI | GKGCMC | 2 cut(s) | 1548, 2357 |
| BstV1I | GCAGC | 3 cut(s) | 1645, 2396, 2645 |
| BstV2I | GAAGAC | 4 cut(s) | 665, 1941, 2726, 2750 |
| BstX2I | RGATCY | 3 cut(s) | 781, 1945, 2829 |
| BstYI | RGATCY | 3 cut(s) | 781, 1945, 2829 |
| BstZ17I | GTATAC | 1 cut(s) | 839 |
| Bsu36I | CCTNAGG | 2 cut(s) | 1778, 1962 |
| BsuRI | GGCC | 8 cut(s) | 372, 858, 1082, 1304, 1595, 1967, 2248, 2824 |
| BtgI | CCRYGG | 1 cut(s) | 1968 |
| BtrI | CACGTC | 1 cut(s) | 235 |
| BtsCI | GGATG | 7 cut(s) | 157, 648, 1255, 2370, 2534, 2838, 2847 |
| BtsI | GCAGTG | 1 cut(s) | 2723 |
| BtsIMutI | CAGTG | 3 cut(s) | 2344, 2704, 2723 |
| BveI | ACCTGC | 1 cut(s) | 2610 |
| Cac8I | GCNNGC | 1 cut(s) | 2250 |
| CaiI | CAGNNNCTG | 1 cut(s) | 192 |
| CfoI | GCGC | 1 cut(s) | 2791 |
| Cfr13I | GGNCC | 6 cut(s) | 856, 1303, 1710, 1782, 2373, 2823 |
| CseI | GACGC | 2 cut(s) | 17, 2755 |
| Csp6I | GTAC | 5 cut(s) | 220, 306, 347, 2468, 2870 |
| CviAII | CATG | 8 cut(s) | 1132, 1535, 1969, 2098, 2119, 2414, 2679, 2815 |
| CviQI | GTAC | 5 cut(s) | 220, 306, 347, 2468, 2870 |
| DdeI | CTNAG | 7 cut(s) | 425, 578, 1286, 1406, 1778, 1962, 2237 |
| DraI | TTTAAA | 1 cut(s) | 2322 |
| DraIII | CACNNNGTG | 2 cut(s) | 1899, 2352 |
| EaeI | YGGCCR | 2 cut(s) | 370, 1080 |
| Eam1104I | CTCTTC | 4 cut(s) | 155, 603, 1947, 2439 |
| EarI | CTCTTC | 4 cut(s) | 155, 603, 1947, 2439 |
| Eco130I | CCWWGG | 1 cut(s) | 1968 |
| Eco47I | GGWCC | 3 cut(s) | 1710, 1782, 2373 |
| Eco57I | CTGAAG | 5 cut(s) | 588, 2042, 2114, 2600, 2738 |
| Eco81I | CCTNAGG | 2 cut(s) | 1778, 1962 |
| Eco88I | CYCGRG | 1 cut(s) | 146 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 636 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1710, 1782, 2373 |
| EcoRII | CCWGG | 1 cut(s) | 2271 |
| EcoT14I | CCWWGG | 1 cut(s) | 1968 |
| EcoT22I | ATGCAT | 1 cut(s) | 1536 |
| ErhI | CCWWGG | 1 cut(s) | 1968 |
| Esp3I | CGTCTC | 1 cut(s) | 2871 |
| FaeI | CATG | 8 cut(s) | 1135, 1538, 1972, 2101, 2122, 2417, 2682, 2818 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 692, 724, 1389, 1421, 1491, 1523, 2640, 2672 |
| FaqI | GGGAC | 1 cut(s) | 203 |
| FatI | CATG | 8 cut(s) | 1131, 1534, 1968, 2097, 2118, 2413, 2678, 2814 |
| FbaI | TGATCA | 2 cut(s) | 1669, 1908 |
| FblI | GTMKAC | 5 cut(s) | 531, 681, 838, 2056, 2598 |
| Fnu4HI | GCNGC | 5 cut(s) | 1659, 1991, 2410, 2634, 2750 |
| FokI | GGATG | 7 cut(s) | 164, 655, 1262, 2377, 2521, 2825, 2834 |
| Fsp4HI | GCNGC | 5 cut(s) | 1659, 1991, 2410, 2634, 2750 |
| FspBI | CTAG | 6 cut(s) | 197, 354, 450, 878, 2066, 2438 |
| FspI | TGCGCA | 1 cut(s) | 2790 |
| GlaI | GCGC | 1 cut(s) | 2790 |
| GluI | GCNGC | 5 cut(s) | 1659, 1991, 2410, 2634, 2750 |
| GsaI | CCCAGC | 1 cut(s) | 2640 |
| HaeIII | GGCC | 8 cut(s) | 372, 858, 1082, 1304, 1595, 1967, 2248, 2824 |
| HapII | CCGG | 1 cut(s) | 2606 |
| HgaI | GACGC | 2 cut(s) | 17, 2755 |
| HhaI | GCGC | 1 cut(s) | 2791 |
| Hin1I | GRCGYC | 1 cut(s) | 2747 |
| Hin1II | CATG | 8 cut(s) | 1135, 1538, 1972, 2101, 2122, 2417, 2682, 2818 |
| Hin6I | GCGC | 1 cut(s) | 2789 |
| HinP1I | GCGC | 1 cut(s) | 2789 |
| HincII | GTYRAC | 3 cut(s) | 379, 532, 2157 |
| HindII | GTYRAC | 3 cut(s) | 379, 532, 2157 |
| HindIII | AAGCTT | 2 cut(s) | 2138, 2239 |
| HpaII | CCGG | 1 cut(s) | 2606 |
| HphI | GGTGA | 7 cut(s) | 85, 106, 275, 308, 976, 1613, 2653 |
| Hpy188I | TCNGA | 8 cut(s) | 126, 579, 739, 1316, 2089, 2580, 2742, 2888 |
| Hpy99I | CGWCG | 2 cut(s) | 236, 399 |
| HpyAV | CCTTC | 5 cut(s) | 287, 325, 2405, 2618, 2747 |
| HpyCH4III | ACNGT | 9 cut(s) | 395, 793, 918, 1047, 1445, 1580, 2339, 2708, 2861 |
| HpyCH4IV | ACGT | 2 cut(s) | 234, 1318 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 137, 202, 1010 |
| HpyF3I | CTNAG | 7 cut(s) | 425, 578, 1286, 1406, 1778, 1962, 2237 |
| HpySE526I | ACGT | 2 cut(s) | 234, 1318 |
| Hsp92I | GRCGYC | 1 cut(s) | 2747 |
| Hsp92II | CATG | 8 cut(s) | 1135, 1538, 1972, 2101, 2122, 2417, 2682, 2818 |
| HspAI | GCGC | 1 cut(s) | 2789 |
| Ksp22I | TGATCA | 2 cut(s) | 1669, 1908 |
| LmnI | GCTCC | 3 cut(s) | 805, 1001, 1666 |
| Lsp1109I | GCAGC | 3 cut(s) | 1645, 2396, 2645 |
| LweI | GCATC | 5 cut(s) | 142, 787, 1521, 2002, 2775 |
| MaeI | CTAG | 6 cut(s) | 197, 354, 450, 878, 2066, 2438 |
| MaeII | ACGT | 2 cut(s) | 234, 1318 |
| MbiI | CCGCTC | 1 cut(s) | 2752 |
| MflI | RGATCY | 3 cut(s) | 781, 1945, 2829 |
| MhlI | GDGCHC | 4 cut(s) | 147, 1548, 2357, 2706 |
| MlsI | TGGCCA | 1 cut(s) | 372 |
| MluNI | TGGCCA | 1 cut(s) | 372 |
| MlyI | GAGTC | 6 cut(s) | 498, 1109, 1685, 2056, 2062, 2776 |
| MmeI | TCCRAC | 2 cut(s) | 1227, 1890 |
| Mox20I | TGGCCA | 1 cut(s) | 372 |
| Mph1103I | ATGCAT | 1 cut(s) | 1536 |
| MroXI | GAANNNNTTC | 3 cut(s) | 573, 1815, 2427 |
| MscI | TGGCCA | 1 cut(s) | 372 |
| MslI | CAYNNNNRTG | 5 cut(s) | 396, 846, 1998, 2337, 2418 |
| Msp20I | TGGCCA | 1 cut(s) | 372 |
| MspA1I | CMGCKG | 1 cut(s) | 2636 |
| MspI | CCGG | 1 cut(s) | 2606 |
| MspR9I | CCNGG | 1 cut(s) | 2273 |
| Mva1269I | GAATGC | 1 cut(s) | 2293 |
| MvaI | CCWGG | 1 cut(s) | 2273 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 137, 202, 1010 |
| NcoI | CCATGG | 1 cut(s) | 1968 |
| NlaIII | CATG | 8 cut(s) | 1135, 1538, 1972, 2101, 2122, 2417, 2682, 2818 |
| NlaIV | GGNNCC | 4 cut(s) | 1305, 1712, 2176, 2344 |
| NmeAIII | GCCGAG | 1 cut(s) | 1108 |
| NmuCI | GTSAC | 6 cut(s) | 398, 964, 2457, 2560, 2708, 2834 |
| NsbI | TGCGCA | 1 cut(s) | 2790 |
| NsiI | ATGCAT | 1 cut(s) | 1536 |
| OliI | CACNNNNGTG | 1 cut(s) | 396 |
| PaeR7I | CTCGAG | 1 cut(s) | 146 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 228 |
| PctI | GAATGC | 1 cut(s) | 2293 |
| PdmI | GAANNNNTTC | 3 cut(s) | 573, 1815, 2427 |
| PfeI | GAWTC | 6 cut(s) | 1115, 1682, 2315, 2523, 2531, 2651 |
| Pfl23II | CGTACG | 1 cut(s) | 219 |
| PflFI | GACNNNGTC | 2 cut(s) | 1320, 2882 |
| PfoI | TCCNGGA | 1 cut(s) | 2271 |
| PkrI | GCNGC | 5 cut(s) | 1660, 1992, 2411, 2635, 2751 |
| PleI | GAGTC | 6 cut(s) | 497, 1108, 1685, 2056, 2061, 2776 |
| PpsI | GAGTC | 6 cut(s) | 497, 1108, 1685, 2056, 2061, 2776 |
| PpuMI | RGGWCCY | 3 cut(s) | 1710, 1782, 2373 |
| PshBI | ATTAAT | 1 cut(s) | 2184 |
| PsiI | TTATAA | 1 cut(s) | 468 |
| Psp5II | RGGWCCY | 3 cut(s) | 1710, 1782, 2373 |
| Psp6I | CCWGG | 1 cut(s) | 2271 |
| PspFI | CCCAGC | 1 cut(s) | 2636 |
| PspGI | CCWGG | 1 cut(s) | 2271 |
| PspLI | CGTACG | 1 cut(s) | 219 |
| PspN4I | GGNNCC | 4 cut(s) | 1305, 1712, 2176, 2344 |
| PspPI | GGNCC | 6 cut(s) | 856, 1303, 1710, 1782, 2373, 2823 |
| PspPPI | RGGWCCY | 3 cut(s) | 1710, 1782, 2373 |
| PspXI | VCTCGAGB | 1 cut(s) | 146 |
| PstNI | CAGNNNCTG | 1 cut(s) | 192 |
| PsuI | RGATCY | 3 cut(s) | 781, 1945, 2829 |
| PsyI | GACNNNGTC | 2 cut(s) | 1320, 2882 |
| PvuII | CAGCTG | 1 cut(s) | 2636 |
| RsaI | GTAC | 5 cut(s) | 221, 307, 348, 2469, 2871 |
| RsaNI | GTAC | 5 cut(s) | 220, 306, 347, 2468, 2870 |
| RseI | CAYNNNNRTG | 5 cut(s) | 396, 846, 1998, 2337, 2418 |
| SalI | GTCGAC | 1 cut(s) | 530 |
| SatI | GCNGC | 5 cut(s) | 1659, 1991, 2410, 2634, 2750 |
| Sau96I | GGNCC | 6 cut(s) | 856, 1303, 1710, 1782, 2373, 2823 |
| ScaI | AGTACT | 2 cut(s) | 307, 2469 |
| SchI | GAGTC | 6 cut(s) | 498, 1109, 1685, 2056, 2062, 2776 |
| ScrFI | CCNGG | 1 cut(s) | 2273 |
| SduI | GDGCHC | 4 cut(s) | 147, 1548, 2357, 2706 |
| SfaNI | GCATC | 5 cut(s) | 142, 787, 1521, 2002, 2775 |
| SfcI | CTRYAG | 3 cut(s) | 633, 901, 2057 |
| Sfr274I | CTCGAG | 1 cut(s) | 146 |
| SinI | GGWCC | 3 cut(s) | 1710, 1782, 2373 |
| SlaI | CTCGAG | 1 cut(s) | 146 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 396, 846, 1998, 2337, 2418 |
| SmlI | CTYRAG | 6 cut(s) | 146, 503, 1792, 1846, 1924, 2753 |
| SmoI | CTYRAG | 6 cut(s) | 146, 503, 1792, 1846, 1924, 2753 |
| SsiI | CCGC | 3 cut(s) | 1277, 1990, 2750 |
| SspI | AATATT | 4 cut(s) | 960, 1062, 2080, 2516 |
| SspMI | CTAG | 6 cut(s) | 197, 354, 450, 878, 2066, 2438 |
| StyD4I | CCNGG | 1 cut(s) | 2271 |
| StyI | CCWWGG | 1 cut(s) | 1968 |
| TaaI | ACNGT | 9 cut(s) | 395, 793, 918, 1047, 1445, 1580, 2339, 2708, 2861 |
| TaiI | ACGT | 2 cut(s) | 237, 1321 |
| TaqI | TCGA | 8 cut(s) | 147, 531, 844, 1458, 1824, 2328, 2489, 2519 |
| TatI | WGTACW | 3 cut(s) | 305, 2467, 2869 |
| TauI | GCSGC | 2 cut(s) | 1993, 2752 |
| TfiI | GAWTC | 6 cut(s) | 1115, 1682, 2315, 2523, 2531, 2651 |
| TscAI | CASTG | 3 cut(s) | 2344, 2711, 2730 |
| TseFI | GTSAC | 6 cut(s) | 398, 964, 2457, 2560, 2708, 2834 |
| TseI | GCWGC | 3 cut(s) | 1658, 2409, 2633 |
| Tsp45I | GTSAC | 6 cut(s) | 398, 964, 2457, 2560, 2708, 2834 |
| TspGWI | ACGGA | 1 cut(s) | 1988 |
| TspRI | CASTG | 3 cut(s) | 2344, 2711, 2730 |
| Tth111I | GACNNNGTC | 2 cut(s) | 1320, 2882 |
| VneI | GTGCAC | 1 cut(s) | 1544 |
| VpaK11BI | GGWCC | 3 cut(s) | 1710, 1782, 2373 |
| VspI | ATTAAT | 1 cut(s) | 2184 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 636 |
| XapI | RAATTY | 8 cut(s) | 258, 805, 1449, 1702, 1858, 2423, 2475, 2758 |
| XbaI | TCTAGA | 1 cut(s) | 2065 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2185 |
| XhoI | CTCGAG | 1 cut(s) | 146 |
| XmiI | GTMKAC | 5 cut(s) | 531, 681, 838, 2056, 2598 |
| XmnI | GAANNNNTTC | 3 cut(s) | 573, 1815, 2427 |
| XspI | CTAG | 6 cut(s) | 197, 354, 450, 878, 2066, 2438 |
| ZrmI | AGTACT | 2 cut(s) | 307, 2469 |
| Zsp2I | ATGCAT | 1 cut(s) | 1536 |