disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 12 - 96 | 4.8e-19 | Rx N-terminal domain |
| NB-ARC | PF00931 | 187 - 358 | 1.7e-30 | NB-ARC domain |
| WHD_DRP | PF23559 | 443 - 514 | 1.3e-22 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 541 - 649 | 3.8e-09 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 589 - 904 | 1.6e-20 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 717 - 833 | 3.1e-22 | R13L1/DRL21 LRRs |
| LRR_RPS2 | PF23247 | 797 - 929 | 1e-05 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 681, 1505 |
| AarI | CACCTGC | 1 cut(s) | 2381 |
| Acc36I | ACCTGC | 1 cut(s) | 2381 |
| AccB1I | GGYRCC | 1 cut(s) | 2366 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 229 |
| AccBSI | CCGCTC | 1 cut(s) | 1351 |
| AccI | GTMKAC | 1 cut(s) | 1928 |
| AciI | CCGC | 4 cut(s) | 155, 774, 1351, 2324 |
| AclWI | GGATC | 5 cut(s) | 20, 39, 207, 661, 731 |
| AcoI | YGGCCR | 1 cut(s) | 2321 |
| AcsI | RAATTY | 7 cut(s) | 110, 334, 1693, 1759, 1795, 2673, 2706 |
| AcuI | CTGAAG | 1 cut(s) | 2051 |
| AcyI | GRCGYC | 1 cut(s) | 90 |
| AfaI | GTAC | 5 cut(s) | 59, 1702, 1919, 2036, 2471 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 186, 229, 635, 2456 |
| AflII | CTTAAG | 3 cut(s) | 410, 1813, 2404 |
| AflIII | ACRYGT | 1 cut(s) | 2613 |
| AhlI | ACTAGT | 1 cut(s) | 673 |
| AjiI | CACGTC | 1 cut(s) | 235 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 68, 100, 2589, 2621 |
| AleI | CACNNNNGTG | 2 cut(s) | 885, 2224 |
| Alw21I | GWGCWC | 1 cut(s) | 934 |
| Alw26I | GTCTC | 3 cut(s) | 259, 2091, 2171 |
| AlwI | GGATC | 5 cut(s) | 20, 39, 207, 661, 731 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1908 |
| Ama87I | CYCGRG | 1 cut(s) | 1723 |
| AoxI | GGCC | 4 cut(s) | 177, 1287, 2321, 2831 |
| ApeKI | GCWGC | 4 cut(s) | 357, 1148, 1950, 2120 |
| ApoI | RAATTY | 7 cut(s) | 110, 334, 1693, 1759, 1795, 2673, 2706 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 509, 541, 1780, 1812 |
| AseI | ATTAAT | 1 cut(s) | 1365 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1620 |
| AspLEI | GCGC | 1 cut(s) | 409 |
| AspS9I | GGNCC | 4 cut(s) | 616, 876, 1288, 2832 |
| AvaI | CYCGRG | 1 cut(s) | 1723 |
| AvaII | GGWCC | 2 cut(s) | 616, 876 |
| BaeGI | GKGCMC | 1 cut(s) | 2369 |
| BanI | GGYRCC | 1 cut(s) | 2366 |
| BbsI | GAAGAC | 3 cut(s) | 524, 662, 2140 |
| Bbv12I | GWGCWC | 1 cut(s) | 934 |
| BbvCI | CCTCAGC | 1 cut(s) | 1581 |
| BbvI | GCAGC | 4 cut(s) | 344, 1135, 1962, 2107 |
| BceAI | ACGGC | 1 cut(s) | 2336 |
| BclI | TGATCA | 3 cut(s) | 889, 1005, 1569 |
| BcoDI | GTCTC | 3 cut(s) | 259, 2091, 2171 |
| BcuI | ACTAGT | 1 cut(s) | 673 |
| BfaI | CTAG | 5 cut(s) | 354, 635, 674, 863, 2336 |
| BfmI | CTRYAG | 1 cut(s) | 1948 |
| BfrI | CTTAAG | 3 cut(s) | 410, 1813, 2404 |
| BfuAI | ACCTGC | 1 cut(s) | 2381 |
| BglII | AGATCT | 2 cut(s) | 2137, 2767 |
| BisI | GCNGC | 5 cut(s) | 358, 1149, 1951, 2121, 2324 |
| BlsI | GCNGC | 5 cut(s) | 359, 1150, 1952, 2122, 2325 |
| BmcAI | AGTACT | 1 cut(s) | 2036 |
| Bme18I | GGWCC | 2 cut(s) | 616, 876 |
| BmeT110I | CYCGRG | 1 cut(s) | 1723 |
| BmgBI | CACGTC | 1 cut(s) | 235 |
| BmgT120I | GGNCC | 4 cut(s) | 616, 876, 1288, 2832 |
| BmiI | GGNNCC | 4 cut(s) | 617, 878, 1290, 2368 |
| BmrI | ACTGGG | 1 cut(s) | 2141 |
| BmsI | GCATC | 4 cut(s) | 292, 772, 920, 1914 |
| BmuI | ACTGGG | 1 cut(s) | 2141 |
| BpiI | GAAGAC | 3 cut(s) | 524, 662, 2140 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1581 |
| BpuEI | CTTGAG | 3 cut(s) | 1979, 2177, 2231 |
| BsaAI | YACGTR | 2 cut(s) | 61, 1700 |
| BsaHI | GRCGYC | 1 cut(s) | 90 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 186, 229, 635, 2456 |
| Bse1I | ACTGG | 4 cut(s) | 33, 180, 2136, 2879 |
| Bse3DI | GCAATG | 4 cut(s) | 402, 697, 1740, 2302 |
| BseGI | GGATG | 9 cut(s) | 70, 645, 1380, 1736, 2024, 2391, 2432, 2567, 2847 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 186, 229, 635, 2456 |
| BseMI | GCAATG | 4 cut(s) | 402, 697, 1740, 2302 |
| BseMII | CTCAG | 4 cut(s) | 139, 254, 1572, 2256 |
| BseNI | ACTGG | 4 cut(s) | 33, 180, 2136, 2879 |
| BseRI | GAGGAG | 2 cut(s) | 2442, 2642 |
| BseSI | GKGCMC | 1 cut(s) | 2369 |
| BseX3I | CGGCCG | 1 cut(s) | 2321 |
| BseXI | GCAGC | 4 cut(s) | 344, 1135, 1962, 2107 |
| BseYI | CCCAGC | 1 cut(s) | 1291 |
| Bsh1285I | CGRYCG | 3 cut(s) | 515, 886, 2324 |
| BshFI | GGCC | 4 cut(s) | 179, 1289, 2323, 2833 |
| BshNI | GGYRCC | 1 cut(s) | 2366 |
| BsiEI | CGRYCG | 3 cut(s) | 515, 886, 2324 |
| BsiHKAI | GWGCWC | 1 cut(s) | 934 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1723 |
| BsiSI | CCGG | 1 cut(s) | 1898 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 186, 229, 635, 2456 |
| BsmAI | GTCTC | 3 cut(s) | 259, 2091, 2171 |
| BsmI | GAATGC | 2 cut(s) | 492, 2441 |
| BsnI | GGCC | 4 cut(s) | 179, 1289, 2323, 2833 |
| BsoBI | CYCGRG | 1 cut(s) | 1723 |
| Bsp1286I | GDGCHC | 2 cut(s) | 934, 2369 |
| Bsp1407I | TGTACA | 1 cut(s) | 1917 |
| BspACI | CCGC | 4 cut(s) | 155, 774, 1351, 2324 |
| BspANI | GGCC | 4 cut(s) | 179, 1289, 2323, 2833 |
| BspCNI | CTCAG | 4 cut(s) | 138, 255, 1573, 2257 |
| BspHI | TCATGA | 1 cut(s) | 1531 |
| BspLI | GGNNCC | 4 cut(s) | 617, 878, 1290, 2368 |
| BspMAI | CTGCAG | 1 cut(s) | 1952 |
| BspMI | ACCTGC | 1 cut(s) | 2381 |
| BspPI | GGATC | 5 cut(s) | 20, 39, 207, 661, 731 |
| BspT107I | GGYRCC | 1 cut(s) | 2366 |
| BspTI | CTTAAG | 3 cut(s) | 410, 1813, 2404 |
| BsrBI | CCGCTC | 1 cut(s) | 1351 |
| BsrDI | GCAATG | 4 cut(s) | 402, 697, 1740, 2302 |
| BsrGI | TGTACA | 1 cut(s) | 1917 |
| BsrI | ACTGG | 4 cut(s) | 33, 180, 2136, 2879 |
| BssNAI | GTATAC | 1 cut(s) | 1929 |
| BssNI | GRCGYC | 1 cut(s) | 90 |
| Bst1107I | GTATAC | 1 cut(s) | 1929 |
| Bst4CI | ACNGT | 4 cut(s) | 465, 887, 2223, 2717 |
| Bst6I | CTCTTC | 2 cut(s) | 144, 1230 |
| BstACI | GRCGYC | 1 cut(s) | 90 |
| BstAFI | CTTAAG | 3 cut(s) | 410, 1813, 2404 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2373 |
| BstAUI | TGTACA | 1 cut(s) | 1917 |
| BstBAI | YACGTR | 2 cut(s) | 61, 1700 |
| BstC8I | GCNNGC | 2 cut(s) | 118, 434 |
| BstEII | GGTNACC | 1 cut(s) | 952 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 633 |
| BstF5I | GGATG | 9 cut(s) | 70, 645, 1380, 1736, 2024, 2391, 2432, 2567, 2847 |
| BstHHI | GCGC | 1 cut(s) | 409 |
| BstMAI | GTCTC | 3 cut(s) | 259, 2091, 2171 |
| BstMCI | CGRYCG | 3 cut(s) | 515, 886, 2324 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 137, 1154, 2236, 2373 |
| BstNSI | RCATGY | 4 cut(s) | 262, 826, 2273, 2617 |
| BstPI | GGTNACC | 1 cut(s) | 952 |
| BstSFI | CTRYAG | 1 cut(s) | 1948 |
| BstSLI | GKGCMC | 1 cut(s) | 2369 |
| BstSNI | TACGTA | 1 cut(s) | 1700 |
| BstV1I | GCAGC | 4 cut(s) | 344, 1135, 1962, 2107 |
| BstV2I | GAAGAC | 3 cut(s) | 524, 662, 2140 |
| BstX2I | RGATCY | 3 cut(s) | 736, 2137, 2767 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 28, 2179 |
| BstYI | RGATCY | 3 cut(s) | 736, 2137, 2767 |
| BstZ17I | GTATAC | 1 cut(s) | 1929 |
| BstZI | CGGCCG | 1 cut(s) | 2321 |
| BsuRI | GGCC | 4 cut(s) | 179, 1289, 2323, 2833 |
| BtgZI | GCGATG | 1 cut(s) | 2838 |
| BtrI | CACGTC | 1 cut(s) | 235 |
| BtsCI | GGATG | 9 cut(s) | 70, 645, 1380, 1736, 2024, 2391, 2432, 2567, 2847 |
| BtsI | GCAGTG | 2 cut(s) | 1945, 2732 |
| BtsIMutI | CAGTG | 7 cut(s) | 187, 252, 899, 1498, 1945, 2555, 2732 |
| BveI | ACCTGC | 1 cut(s) | 2381 |
| Cac8I | GCNNGC | 2 cut(s) | 118, 434 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1908 |
| CciI | TCATGA | 1 cut(s) | 1531 |
| CfoI | GCGC | 1 cut(s) | 409 |
| Cfr13I | GGNCC | 4 cut(s) | 616, 876, 1288, 2832 |
| CseI | GACGC | 1 cut(s) | 98 |
| Csp6I | GTAC | 5 cut(s) | 58, 1701, 1918, 2035, 2470 |
| CviQI | GTAC | 5 cut(s) | 58, 1701, 1918, 2035, 2470 |
| DraI | TTTAAA | 1 cut(s) | 1212 |
| EaeI | YGGCCR | 1 cut(s) | 2321 |
| EagI | CGGCCG | 1 cut(s) | 2321 |
| Eam1104I | CTCTTC | 2 cut(s) | 144, 1230 |
| EarI | CTCTTC | 2 cut(s) | 144, 1230 |
| EciI | GGCGGA | 1 cut(s) | 170 |
| EclXI | CGGCCG | 1 cut(s) | 2321 |
| Eco105I | TACGTA | 1 cut(s) | 1700 |
| Eco47I | GGWCC | 2 cut(s) | 616, 876 |
| Eco52I | CGGCCG | 1 cut(s) | 2321 |
| Eco57I | CTGAAG | 1 cut(s) | 2051 |
| Eco88I | CYCGRG | 1 cut(s) | 1723 |
| Eco91I | GGTNACC | 1 cut(s) | 952 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 633 |
| EcoO109I | RGGNCCY | 1 cut(s) | 616 |
| EcoO65I | GGTNACC | 1 cut(s) | 952 |
| EcoT22I | ATGCAT | 2 cut(s) | 1521, 1678 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 291, 323, 1374, 1406, 2228, 2260 |
| FbaI | TGATCA | 3 cut(s) | 889, 1005, 1569 |
| FblI | GTMKAC | 1 cut(s) | 1928 |
| Fnu4HI | GCNGC | 5 cut(s) | 358, 1149, 1951, 2121, 2324 |
| FokI | GGATG | 9 cut(s) | 77, 652, 1387, 1723, 2031, 2398, 2439, 2554, 2834 |
| Fsp4HI | GCNGC | 5 cut(s) | 358, 1149, 1951, 2121, 2324 |
| FspBI | CTAG | 5 cut(s) | 354, 635, 674, 863, 2336 |
| GlaI | GCGC | 1 cut(s) | 408 |
| GluI | GCNGC | 5 cut(s) | 358, 1149, 1951, 2121, 2324 |
| GsaI | CCCAGC | 1 cut(s) | 1295 |
| HaeIII | GGCC | 4 cut(s) | 179, 1289, 2323, 2833 |
| HapII | CCGG | 1 cut(s) | 1898 |
| HgaI | GACGC | 1 cut(s) | 98 |
| HhaI | GCGC | 1 cut(s) | 409 |
| Hin1I | GRCGYC | 1 cut(s) | 90 |
| Hin6I | GCGC | 1 cut(s) | 407 |
| HinP1I | GCGC | 1 cut(s) | 407 |
| HincII | GTYRAC | 2 cut(s) | 1081, 1591 |
| HindII | GTYRAC | 2 cut(s) | 1081, 1591 |
| HindIII | AAGCTT | 2 cut(s) | 699, 1155 |
| HinfI | GANTC | 8 cut(s) | 1085, 1165, 1754, 1876, 2050, 2145, 2339, 2666 |
| HpaII | CCGG | 1 cut(s) | 1898 |
| Hpy166II | GTNNAC | 7 cut(s) | 232, 876, 1081, 1591, 1929, 2207, 2810 |
| Hpy188III | TCNNGA | 8 cut(s) | 146, 223, 398, 557, 1469, 1532, 1958, 2336 |
| Hpy8I | GTNNAC | 7 cut(s) | 232, 876, 1081, 1591, 1929, 2207, 2810 |
| Hpy99I | CGWCG | 1 cut(s) | 399 |
| HpyCH4III | ACNGT | 4 cut(s) | 465, 887, 2223, 2717 |
| HpyCH4IV | ACGT | 5 cut(s) | 60, 234, 1699, 2010, 2552 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 137, 1154, 2236, 2373 |
| HpySE526I | ACGT | 5 cut(s) | 60, 234, 1699, 2010, 2552 |
| Hsp92I | GRCGYC | 1 cut(s) | 90 |
| HspAI | GCGC | 1 cut(s) | 407 |
| Ksp22I | TGATCA | 3 cut(s) | 889, 1005, 1569 |
| LmnI | GCTCC | 1 cut(s) | 157 |
| Lsp1109I | GCAGC | 4 cut(s) | 344, 1135, 1962, 2107 |
| LweI | GCATC | 4 cut(s) | 292, 772, 920, 1914 |
| MaeI | CTAG | 5 cut(s) | 354, 635, 674, 863, 2336 |
| MaeII | ACGT | 5 cut(s) | 60, 234, 1699, 2010, 2552 |
| MaeIII | GTNAC | 8 cut(s) | 398, 952, 998, 1943, 2102, 2553, 2609, 2711 |
| MbiI | CCGCTC | 1 cut(s) | 1351 |
| MfeI | CAATTG | 4 cut(s) | 444, 500, 1684, 2380 |
| MflI | RGATCY | 3 cut(s) | 736, 2137, 2767 |
| MhlI | GDGCHC | 2 cut(s) | 934, 2369 |
| MlyI | GAGTC | 3 cut(s) | 1174, 1748, 2154 |
| MmeI | TCCRAC | 5 cut(s) | 177, 694, 783, 1623, 2604 |
| Mph1103I | ATGCAT | 2 cut(s) | 1521, 1678 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1620 |
| MslI | CAYNNNNRTG | 8 cut(s) | 20, 257, 426, 885, 1745, 2081, 2224, 2501 |
| MspCI | CTTAAG | 3 cut(s) | 410, 1813, 2404 |
| MspI | CCGG | 1 cut(s) | 1898 |
| MunI | CAATTG | 4 cut(s) | 444, 500, 1684, 2380 |
| Mva1269I | GAATGC | 2 cut(s) | 492, 2441 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 137, 1154, 2236, 2373 |
| NlaIV | GGNNCC | 4 cut(s) | 617, 878, 1290, 2368 |
| NmuCI | GTSAC | 6 cut(s) | 398, 952, 998, 1943, 2102, 2553 |
| NsiI | ATGCAT | 2 cut(s) | 1521, 1678 |
| NspI | RCATGY | 4 cut(s) | 262, 826, 2273, 2617 |
| OliI | CACNNNNGTG | 2 cut(s) | 885, 2224 |
| PaeR7I | CTCGAG | 1 cut(s) | 1723 |
| PagI | TCATGA | 1 cut(s) | 1531 |
| PaqCI | CACCTGC | 1 cut(s) | 2381 |
| PciI | ACATGT | 1 cut(s) | 2613 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 240 |
| PctI | GAATGC | 2 cut(s) | 492, 2441 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1620 |
| PfeI | GAWTC | 5 cut(s) | 1085, 1876, 2050, 2339, 2666 |
| PflFI | GACNNNGTC | 2 cut(s) | 374, 523 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 229 |
| PkrI | GCNGC | 5 cut(s) | 359, 1150, 1952, 2122, 2325 |
| PleI | GAGTC | 3 cut(s) | 1173, 1748, 2153 |
| PpsI | GAGTC | 3 cut(s) | 1173, 1748, 2153 |
| Ppu21I | YACGTR | 2 cut(s) | 61, 1700 |
| PpuMI | RGGWCCY | 1 cut(s) | 616 |
| PscI | ACATGT | 1 cut(s) | 2613 |
| PshBI | ATTAAT | 1 cut(s) | 1365 |
| PsiI | TTATAA | 2 cut(s) | 681, 1505 |
| Psp5II | RGGWCCY | 1 cut(s) | 616 |
| PspEI | GGTNACC | 1 cut(s) | 952 |
| PspFI | CCCAGC | 1 cut(s) | 1291 |
| PspN4I | GGNNCC | 4 cut(s) | 617, 878, 1290, 2368 |
| PspPI | GGNCC | 4 cut(s) | 616, 876, 1288, 2832 |
| PspPPI | RGGWCCY | 1 cut(s) | 616 |
| PspXI | VCTCGAGB | 1 cut(s) | 1723 |
| PstI | CTGCAG | 1 cut(s) | 1952 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1908 |
| PsuI | RGATCY | 3 cut(s) | 736, 2137, 2767 |
| PsyI | GACNNNGTC | 2 cut(s) | 374, 523 |
| RsaI | GTAC | 5 cut(s) | 59, 1702, 1919, 2036, 2471 |
| RsaNI | GTAC | 5 cut(s) | 58, 1701, 1918, 2035, 2470 |
| RseI | CAYNNNNRTG | 8 cut(s) | 20, 257, 426, 885, 1745, 2081, 2224, 2501 |
| SatI | GCNGC | 5 cut(s) | 358, 1149, 1951, 2121, 2324 |
| Sau96I | GGNCC | 4 cut(s) | 616, 876, 1288, 2832 |
| ScaI | AGTACT | 1 cut(s) | 2036 |
| SchI | GAGTC | 3 cut(s) | 1174, 1748, 2154 |
| SduI | GDGCHC | 2 cut(s) | 934, 2369 |
| SfaNI | GCATC | 4 cut(s) | 292, 772, 920, 1914 |
| SfcI | CTRYAG | 1 cut(s) | 1948 |
| Sfr274I | CTCGAG | 1 cut(s) | 1723 |
| SinI | GGWCC | 2 cut(s) | 616, 876 |
| SlaI | CTCGAG | 1 cut(s) | 1723 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 20, 257, 426, 885, 1745, 2081, 2224, 2501 |
| SmlI | CTYRAG | 7 cut(s) | 410, 1723, 1813, 1958, 2156, 2210, 2404 |
| SmoI | CTYRAG | 7 cut(s) | 410, 1723, 1813, 1958, 2156, 2210, 2404 |
| SnaBI | TACGTA | 1 cut(s) | 1700 |
| SpeI | ACTAGT | 1 cut(s) | 673 |
| SsiI | CCGC | 4 cut(s) | 155, 774, 1351, 2324 |
| SspI | AATATT | 2 cut(s) | 948, 2178 |
| SspMI | CTAG | 5 cut(s) | 354, 635, 674, 863, 2336 |
| TaaI | ACNGT | 4 cut(s) | 465, 887, 2223, 2717 |
| TaiI | ACGT | 5 cut(s) | 63, 237, 1702, 2013, 2555 |
| TaqI | TCGA | 4 cut(s) | 147, 556, 837, 1724 |
| TaqII | GACCGA | 1 cut(s) | 529 |
| TatI | WGTACW | 2 cut(s) | 1917, 2034 |
| TauI | GCSGC | 1 cut(s) | 2326 |
| TfiI | GAWTC | 5 cut(s) | 1085, 1876, 2050, 2339, 2666 |
| TscAI | CASTG | 7 cut(s) | 187, 259, 899, 1498, 1952, 2562, 2739 |
| TseFI | GTSAC | 6 cut(s) | 398, 952, 998, 1943, 2102, 2553 |
| TseI | GCWGC | 4 cut(s) | 357, 1148, 1950, 2120 |
| Tsp45I | GTSAC | 6 cut(s) | 398, 952, 998, 1943, 2102, 2553 |
| TspDTI | ATGAA | 4 cut(s) | 1611, 1725, 2237, 2249 |
| TspGWI | ACGGA | 1 cut(s) | 383 |
| TspRI | CASTG | 7 cut(s) | 187, 259, 899, 1498, 1952, 2562, 2739 |
| Tth111I | GACNNNGTC | 2 cut(s) | 374, 523 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 229 |
| Vha464I | CTTAAG | 3 cut(s) | 410, 1813, 2404 |
| VpaK11BI | GGWCC | 2 cut(s) | 616, 876 |
| VspI | ATTAAT | 1 cut(s) | 1365 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 633 |
| XapI | RAATTY | 7 cut(s) | 110, 334, 1693, 1759, 1795, 2673, 2706 |
| XbaI | TCTAGA | 1 cut(s) | 2335 |
| XceI | RCATGY | 4 cut(s) | 262, 826, 2273, 2617 |
| XhoI | CTCGAG | 1 cut(s) | 1723 |
| XmiI | GTMKAC | 1 cut(s) | 1928 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1620 |
| XspI | CTAG | 5 cut(s) | 354, 635, 674, 863, 2336 |
| ZrmI | AGTACT | 1 cut(s) | 2036 |
| Zsp2I | ATGCAT | 2 cut(s) | 1521, 1678 |