FvH4_7g23500

disease resistance protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
18308446 .. 18314044
5599 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g23500.t1

Sequence Viewer

Length: 2193 bp
ATGGCTGGAGTACTAGTTGACGTTCTGATACAACGTTTGGCTACGCTCGCCCTTGACAAGGTCGAACGAGAGCTGAAGCTGGTGGTTGGGGTTAAGCGAGAAATCAAAAATCTCACCAAGAAACTCATAGCTATTCGAGCTGTGCTGGAGGACGCAGAGCAGAGGCAAGTGATGGAAGCCAACGTGAAACTTTGGCTAGATGAGCTAAATGATGTTTCCTTCGACATGGATGACGTGCTGGATGAGTGGATCACTAGAGTTGAGAAGCATCAATTGGAGAAACAAGAAACGGAAGGTGCTACTGTTGTTGTGGCTACTAAGAAGAAGATGATAGTTGAATTGAAAAGCCTTAGGACATTAATATTGTTGGAATGGCCTTTCGAAGAAATTCCTGAGACGATAGGCGGGTTGATACACTTAAGGTATCTTGATTTATCCGGTAATGAGGAGTTGAAAGAATTACCGAGCGCCGTGGGTAGCTTATACAACCTGCAAACCTTGCGACTTGTTGGTTGCGACAGTCTAACGAGAATAGATGTGCGGAGACTGATTAACTTGAGGCATCTCTATGTTAAAGGCAGCTTATCACTGAGGTTAATTAAAGGGATTGAGAAATTAACACATATGCAAAGACTGGATTGTTTTAAGGTCCGAGACGGAGGTGATGAAGGAGGAAACAAGTTGGAACATTTGAAAGACTTGAACCAGCTTCAAGGGAGTCTTGTGATTTCTATTGATAGGTTACCCAGTACGGCGGAGAATAATGCAGCAATTATGAAGAATAAGGCCCACATCTTGGAATTGTGTCTATTTTTCAAGGGCAGTACTGAAGATGACCGACCAATTATGAATAGGTTAGAGCCGCATCCAAGTCTGGAATCTCTGACCATAGCTGGGTATAAAGGCGGCACCTTTTCCGATTGGTTGTCGTCTTTACACAGCTTGAGATTCCTCAGCCTTTACAAATGCCTAGGTTGTGATATTTTGCCTTCTTTGGGGAAACTGGCGTCCCTTGAATCATTGGAAATTGAGAAACTCCCTATAGTCTCAAAGGTAGGAGTTGAGTTTCTGGGAATAGAACAAGGGCAAACCTCCTCCTCGTCCTCCGTTTTCGTTTCATTCCCCAAGCTCAAACAACTCACAATTCAATTCATGGACTCGTGGGAAGAGTGGGAAGGAGTGGAAGAGGGGAATTCTGACAACATTACAATCATGCCATTCCTTGATCAGTTGACAATCGTTGACTGCAAGAAGCTAAAAGCACTGCCGGACTTCCTGTGGAAGACACCTCTACAGGAATTGAACATCAGCGACTCTCCCATTCTCCAAAACCTTTACGGACAAGAAAATGGCGAGGAGCGGACCAAGATTTCTTACATCCCAAGCATCCAGATACAGGAACTTTTTGGTACATTTCCTTCCATGGCTTCAGCTTCTCTTAGACAAATCACATTTTTAAGAGCAAAAGGCAAATTATCCACCTGGCACGTTTTCCATGGTATGTCACTATTGGAGGGCAGAAGGAAACATCAATTGAGGACCATCACTTCAGGCATGATTTGGCAGAGTTATATTTGCACTGACCAGACGGCTATGAGGGTACTGAAAGAGGTCAAAGACTCCAAGATCTTACCGGTTTTTTATACATGTGCCTACTCAGACACTCATCTCCTTACCAGTTTTGGCTCTTTATTTCTTCTGCTGGTGTTGTTCAAGATACAGGTCATTTTAAGGCTTCATTTGGAATGGCCATGGAGCTGTAAAGCTGATGGGATGGGAGGAAGCTCAAAACTCCAAGTTTATATATGTACTCCTCAACAAGTTGCACAGCATCAATTTGCATTTCAAATTCTAACACAGAAATTGGTACGCGGAGATATGACATATGAGGAACCTTGGTCTAGCAGTTTCAAGACAGTTCCATCCCATCTGCAAGAGAGATTAAAACGTCAGGTTCTGGAATACCAAGCATATCTGATGAAAAAAGTTCAGATCTCTCTGGAAAAAAAATTAGCAGCTCCAGCAATGTCTCTGAGCAGTGAACTTTGCCTGTTTATTTTCACAACTGTGGACACAAGGATATTGGTGTTCAAGGGTGTTGATGGTAGATATACCGCAAGCATAAGCAACGACCTCGTAGACCGTTTTCCGGCCACGAAGGGCCCCGCCCCCGACATGCTTCTGGTAGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

731

Amino Acids

82.75

Weight (kDa)

6.6

Isoelectric Point (pI)

40.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 95 1.7e-21 Rx N-terminal domain
LRR_14 PF23598 132 - 386 2.3e-22 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 228 - 345 9.9e-26 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 498
AccB1I GGYRCC 1 cut(s) 908
AccB7I CCANNNNNTGG 1 cut(s) 796
AccBSI CCGCTC 1 cut(s) 1360
AccI GTMKAC 2 cut(s) 2139, 2187
AccII CGCG 1 cut(s) 1872
AciI CCGC 9 cut(s) 405, 541, 755, 863, 906, 1360, 1872, 2115, 2166
AclI AACGTT 1 cut(s) 34
AclWI GGATC 1 cut(s) 257
AcoI YGGCCR 2 cut(s) 1748, 2151
AcsI RAATTY 3 cut(s) 387, 1192, 1848
AcuI CTGAAG 4 cut(s) 95, 849, 1413, 1533
AcyI GRCGYC 1 cut(s) 1007
AfaI GTAC 7 cut(s) 12, 751, 826, 1411, 1602, 1810, 1869
AfiI CCNNNNNNNGG 6 cut(s) 58, 796, 894, 995, 1396, 2149
AflII CTTAAG 1 cut(s) 418
AflIII ACRYGT 1 cut(s) 1646
AgeI ACCGGT 1 cut(s) 1633
AhlI ACTAGT 1 cut(s) 13
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 1 cut(s) 1481
AjuI GAANNNNNNNTTGG 2 cut(s) 257, 289
AleI CACNNNNGTG 1 cut(s) 2066
Alw26I GTCTC 5 cut(s) 389, 538, 648, 1051, 2034
AlwI GGATC 1 cut(s) 257
AlwNI CAGNNNCTG 1 cut(s) 1957
AoxI GGCC 5 cut(s) 374, 786, 1748, 2151, 2161
ApaI GGGCCC 1 cut(s) 2165
ApeKI GCWGC 3 cut(s) 579, 767, 2015
ApoI RAATTY 3 cut(s) 387, 1192, 1848
AseI ATTAAT 1 cut(s) 359
AsiGI ACCGGT 1 cut(s) 1633
Asp700I GAANNNNTTC 1 cut(s) 387
AspA2I CCTAGG 1 cut(s) 970
AspLEI GCGC 1 cut(s) 470
AspS9I GGNCC 6 cut(s) 649, 787, 1362, 1539, 2161, 2162
AsuHPI GGTGA 2 cut(s) 106, 674
AsuII TTCGAA 1 cut(s) 381
AvaII GGWCC 3 cut(s) 649, 1362, 1539
AvrII CCTAGG 1 cut(s) 970
AxyI CCTNAGG 1 cut(s) 350
BaeGI GKGCMC 1 cut(s) 2165
BalI TGGCCA 1 cut(s) 1750
BanI GGYRCC 1 cut(s) 908
BanII GRGCYC 1 cut(s) 2165
BarI GAAGNNNNNNTAC 2 cut(s) 1402, 1434
BauI CACGAG 1 cut(s) 1159
BbsI GAAGAC 1 cut(s) 1289
BbvCI CCTCAGC 1 cut(s) 953
BbvI GCAGC 3 cut(s) 591, 779, 2027
BccI CCATC 7 cut(s) 166, 1550, 1763, 1768, 1930, 1935, 2096
BceAI ACGGC 3 cut(s) 455, 768, 1605
BcgI CGANNNNNNTGC 2 cut(s) 2116, 2150
BciT130I CCWGG 1 cut(s) 1483
BclI TGATCA 1 cut(s) 1225
BcoDI GTCTC 5 cut(s) 389, 538, 648, 1051, 2034
BcuI ACTAGT 1 cut(s) 13
BfaI CTAG 5 cut(s) 14, 197, 255, 971, 1902
BfmI CTRYAG 2 cut(s) 1041, 1292
BfoI RGCGCY 1 cut(s) 471
BfrI CTTAAG 1 cut(s) 418
BfuAI ACCTGC 1 cut(s) 498
BglII AGATCT 2 cut(s) 1626, 1992
BisI GCNGC 5 cut(s) 580, 768, 863, 907, 2016
BlnI CCTAGG 1 cut(s) 970
BlsI GCNGC 5 cut(s) 581, 769, 864, 908, 2017
BmcAI AGTACT 2 cut(s) 12, 826
Bme1390I CCNGG 1 cut(s) 1483
Bme18I GGWCC 3 cut(s) 649, 1362, 1539
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 6 cut(s) 649, 787, 1362, 1539, 2161, 2162
BmiI GGNNCC 4 cut(s) 910, 1893, 2163, 2164
BmrFI CCNGG 1 cut(s) 1483
BmrI ACTGGG 1 cut(s) 741
BmsI GCATC 5 cut(s) 277, 571, 874, 1395, 1840
BmuI ACTGGG 1 cut(s) 741
BpiI GAAGAC 1 cut(s) 1289
BpmI CTGGAG 3 cut(s) 27, 167, 2004
Bpu10I CCTNAGC 1 cut(s) 953
Bpu14I TTCGAA 1 cut(s) 381
BpuEI CTTGAG 2 cut(s) 577, 964
BsaHI GRCGYC 1 cut(s) 1007
BsaJI CCNNGG 6 cut(s) 471, 970, 1422, 1495, 1751, 1895
BsaWI WCCGGW 2 cut(s) 437, 1633
BsaXI ACNNNNNCTCC 1 cut(s) 30
Bsc4I CCNNNNNNNGG 6 cut(s) 58, 796, 894, 995, 1396, 2149
Bse118I RCCGGY 1 cut(s) 1633
Bse1I ACTGG 4 cut(s) 639, 747, 1008, 1677
Bse21I CCTNAGG 1 cut(s) 350
Bse3DI GCAATG 1 cut(s) 2031
BseBI CCWGG 1 cut(s) 1483
BseDI CCNNGG 6 cut(s) 471, 970, 1422, 1495, 1751, 1895
BseGI GGATG 7 cut(s) 235, 247, 865, 1377, 1386, 1779, 1922
BseLI CCNNNNNNNGG 6 cut(s) 58, 796, 894, 995, 1396, 2149
BseMI GCAATG 1 cut(s) 2031
BseMII CTCAG 5 cut(s) 384, 581, 967, 1671, 2024
BseNI ACTGG 4 cut(s) 639, 747, 1008, 1677
BseRI GAGGAG 5 cut(s) 461, 1084, 1087, 1370, 1803
BseSI GKGCMC 1 cut(s) 2165
BseXI GCAGC 3 cut(s) 591, 779, 2027
BseYI CCCAGC 1 cut(s) 893
Bsh1236I CGCG 1 cut(s) 1872
BshFI GGCC 5 cut(s) 376, 788, 1750, 2153, 2163
BshNI GGYRCC 1 cut(s) 908
BshTI ACCGGT 1 cut(s) 1633
BsiSI CCGG 4 cut(s) 438, 1268, 1634, 2150
BslFI GGGAC 1 cut(s) 994
BslI CCNNNNNNNGG 6 cut(s) 58, 796, 894, 995, 1396, 2149
BsmAI GTCTC 5 cut(s) 389, 538, 648, 1051, 2034
BsmBI CGTCTC 2 cut(s) 389, 648
BsmFI GGGAC 1 cut(s) 994
BsnI GGCC 5 cut(s) 376, 788, 1750, 2153, 2163
Bsp119I TTCGAA 1 cut(s) 381
Bsp120I GGGCCC 1 cut(s) 2161
Bsp1286I GDGCHC 1 cut(s) 2165
Bsp143I GATC 4 cut(s) 249, 1225, 1626, 1992
Bsp19I CCATGG 3 cut(s) 1422, 1495, 1751
BspACI CCGC 9 cut(s) 405, 541, 755, 863, 906, 1360, 1872, 2115, 2166
BspANI GGCC 5 cut(s) 376, 788, 1750, 2153, 2163
BspCNI CTCAG 5 cut(s) 385, 582, 966, 1670, 2025
BspFNI CGCG 1 cut(s) 1872
BspLI GGNNCC 4 cut(s) 910, 1893, 2163, 2164
BspMI ACCTGC 1 cut(s) 498
BspPI GGATC 1 cut(s) 257
BspT104I TTCGAA 1 cut(s) 381
BspT107I GGYRCC 1 cut(s) 908
BspTI CTTAAG 1 cut(s) 418
BsrBI CCGCTC 1 cut(s) 1360
BsrDI GCAATG 1 cut(s) 2031
BsrFI RCCGGY 1 cut(s) 1633
BsrI ACTGG 4 cut(s) 639, 747, 1008, 1677
BssAI RCCGGY 1 cut(s) 1633
BssECI CCNNGG 6 cut(s) 471, 970, 1422, 1495, 1751, 1895
BssMI GATC 4 cut(s) 249, 1225, 1626, 1992
BssNI GRCGYC 1 cut(s) 1007
BssSI CACGAG 1 cut(s) 1159
BssT1I CCWWGG 5 cut(s) 970, 1422, 1495, 1751, 1895
Bst2BI CACGAG 1 cut(s) 1159
Bst2UI CCWGG 1 cut(s) 1483
Bst4CI ACNGT 5 cut(s) 304, 521, 1918, 2068, 2144
Bst6I CTCTTC 2 cut(s) 1161, 1179
BstACI GRCGYC 1 cut(s) 1007
BstAFI CTTAAG 1 cut(s) 418
BstAPI GCANNNNNTGC 1 cut(s) 499
BstBI TTCGAA 1 cut(s) 381
BstC8I GCNNGC 2 cut(s) 48, 2119
BstDEI CTNAG 8 cut(s) 318, 350, 393, 590, 953, 1439, 1657, 2033
BstDSI CCRYGG 4 cut(s) 471, 1422, 1495, 1751
BstEII GGTNACC 1 cut(s) 741
BstENI CCTNNNNNAGG 1 cut(s) 56
BstF5I GGATG 7 cut(s) 235, 247, 865, 1377, 1386, 1779, 1922
BstFNI CGCG 1 cut(s) 1872
BstH2I RGCGCY 1 cut(s) 471
BstHHI GCGC 1 cut(s) 470
BstKTI GATC 4 cut(s) 252, 1228, 1629, 1995
BstMAI GTCTC 5 cut(s) 389, 538, 648, 1051, 2034
BstMBI GATC 4 cut(s) 249, 1225, 1626, 1992
BstMWI GCNNNNNNNGC 5 cut(s) 47, 137, 202, 499, 2021
BstNI CCWGG 1 cut(s) 1483
BstNSI RCATGY 2 cut(s) 1650, 2179
BstPI GGTNACC 1 cut(s) 741
BstSCI CCNGG 1 cut(s) 1481
BstSFI CTRYAG 2 cut(s) 1041, 1292
BstSLI GKGCMC 1 cut(s) 2165
BstUI CGCG 1 cut(s) 1872
BstV1I GCAGC 3 cut(s) 591, 779, 2027
BstV2I GAAGAC 1 cut(s) 1289
BstX2I RGATCY 2 cut(s) 1626, 1992
BstYI RGATCY 2 cut(s) 1626, 1992
Bsu36I CCTNAGG 1 cut(s) 350
BsuRI GGCC 5 cut(s) 376, 788, 1750, 2153, 2163
BtgI CCRYGG 4 cut(s) 471, 1422, 1495, 1751
BtrI CACGTC 1 cut(s) 235
BtsCI GGATG 7 cut(s) 235, 247, 865, 1377, 1386, 1779, 1922
BtsI GCAGTG 2 cut(s) 1262, 2044
BtsIMutI CAGTG 4 cut(s) 587, 1262, 1578, 2044
BveI ACCTGC 1 cut(s) 498
Cac8I GCNNGC 2 cut(s) 48, 2119
CaiI CAGNNNCTG 1 cut(s) 1957
CfoI GCGC 1 cut(s) 470
Cfr10I RCCGGY 1 cut(s) 1633
Cfr13I GGNCC 6 cut(s) 649, 787, 1362, 1539, 2161, 2162
CseI GACGC 2 cut(s) 161, 996
Csp6I GTAC 7 cut(s) 11, 750, 825, 1410, 1601, 1809, 1868
CspAI ACCGGT 1 cut(s) 1633
CviAII CATG 9 cut(s) 226, 1153, 1213, 1423, 1496, 1555, 1647, 1752, 2176
CviQI GTAC 7 cut(s) 11, 750, 825, 1410, 1601, 1809, 1868
DdeI CTNAG 8 cut(s) 318, 350, 393, 590, 953, 1439, 1657, 2033
DpnI GATC 4 cut(s) 251, 1227, 1628, 1994
DpnII GATC 4 cut(s) 249, 1225, 1626, 1992
EaeI YGGCCR 2 cut(s) 1748, 2151
Eam1104I CTCTTC 2 cut(s) 1161, 1179
EarI CTCTTC 2 cut(s) 1161, 1179
EciI GGCGGA 1 cut(s) 770
Eco130I CCWWGG 5 cut(s) 970, 1422, 1495, 1751, 1895
Eco24I GRGCYC 1 cut(s) 2165
Eco47I GGWCC 3 cut(s) 649, 1362, 1539
Eco57I CTGAAG 4 cut(s) 95, 849, 1413, 1533
Eco81I CCTNAGG 1 cut(s) 350
Eco91I GGTNACC 1 cut(s) 741
EcoNI CCTNNNNNAGG 1 cut(s) 56
EcoO109I RGGNCCY 2 cut(s) 2161, 2162
EcoO65I GGTNACC 1 cut(s) 741
EcoRI GAATTC 1 cut(s) 1192
EcoRII CCWGG 1 cut(s) 1481
EcoT14I CCWWGG 5 cut(s) 970, 1422, 1495, 1751, 1895
EcoT38I GRGCYC 1 cut(s) 2165
ErhI CCWWGG 5 cut(s) 970, 1422, 1495, 1751, 1895
Esp3I CGTCTC 2 cut(s) 389, 648
FaeI CATG 9 cut(s) 229, 1156, 1216, 1426, 1499, 1558, 1650, 1755, 2179
FalI AAGNNNNNCTT 2 cut(s) 705, 737
FaqI GGGAC 1 cut(s) 994
FatI CATG 9 cut(s) 225, 1152, 1212, 1422, 1495, 1554, 1646, 1751, 2175
FauI CCCGC 2 cut(s) 398, 2173
FauNDI CATATG 2 cut(s) 624, 1885
FbaI TGATCA 1 cut(s) 1225
FblI GTMKAC 2 cut(s) 2139, 2187
Fnu4HI GCNGC 5 cut(s) 580, 768, 863, 907, 2016
FokI GGATG 7 cut(s) 242, 254, 852, 1364, 1373, 1786, 1909
FriOI GRGCYC 1 cut(s) 2165
Fsp4HI GCNGC 5 cut(s) 580, 768, 863, 907, 2016
FspBI CTAG 5 cut(s) 14, 197, 255, 971, 1902
GlaI GCGC 1 cut(s) 469
GluI GCNGC 5 cut(s) 580, 768, 863, 907, 2016
GsaI CCCAGC 1 cut(s) 897
GsuI CTGGAG 3 cut(s) 27, 167, 2004
HaeII RGCGCY 1 cut(s) 471
HaeIII GGCC 5 cut(s) 376, 788, 1750, 2153, 2163
HapII CCGG 4 cut(s) 438, 1268, 1634, 2150
HgaI GACGC 2 cut(s) 161, 996
HhaI GCGC 1 cut(s) 470
Hin1I GRCGYC 1 cut(s) 1007
Hin1II CATG 9 cut(s) 229, 1156, 1216, 1426, 1499, 1558, 1650, 1755, 2179
Hin6I GCGC 1 cut(s) 468
HinP1I GCGC 1 cut(s) 468
HincII GTYRAC 3 cut(s) 19, 1233, 1243
HindII GTYRAC 3 cut(s) 19, 1233, 1243
HinfI GANTC 7 cut(s) 718, 878, 948, 1016, 1157, 1313, 1619
HpaII CCGG 4 cut(s) 438, 1268, 1634, 2150
HphI GGTGA 2 cut(s) 106, 674
Hpy166II GTNNAC 7 cut(s) 19, 1233, 1243, 2042, 2071, 2140, 2188
Hpy188I TCNGA 9 cut(s) 27, 653, 885, 919, 1198, 1660, 1977, 1992, 2034
Hpy188III TCNNGA 8 cut(s) 392, 428, 875, 1390, 1714, 1912, 1958, 2000
Hpy8I GTNNAC 7 cut(s) 19, 1233, 1243, 2042, 2071, 2140, 2188
HpyAV CCTTC 8 cut(s) 229, 287, 662, 999, 1169, 1428, 1515, 2152
HpyCH4III ACNGT 5 cut(s) 304, 521, 1918, 2068, 2144
HpyCH4IV ACGT 6 cut(s) 21, 34, 183, 234, 1488, 1948
HpyCH4V TGCA 8 cut(s) 493, 628, 767, 1248, 1578, 1826, 1841, 1933
HpyF10VI GCNNNNNNNGC 5 cut(s) 47, 137, 202, 499, 2021
HpyF3I CTNAG 8 cut(s) 318, 350, 393, 590, 953, 1439, 1657, 2033
HpySE526I ACGT 6 cut(s) 21, 34, 183, 234, 1488, 1948
Hsp92I GRCGYC 1 cut(s) 1007
Hsp92II CATG 9 cut(s) 229, 1156, 1216, 1426, 1499, 1558, 1650, 1755, 2179
HspAI GCGC 1 cut(s) 468
Ksp22I TGATCA 1 cut(s) 1225
Kzo9I GATC 4 cut(s) 249, 1225, 1626, 1992
LmnI GCTCC 3 cut(s) 1357, 1755, 2023
Lsp1109I GCAGC 3 cut(s) 591, 779, 2027
LweI GCATC 5 cut(s) 277, 571, 874, 1395, 1840
MaeI CTAG 5 cut(s) 14, 197, 255, 971, 1902
MaeII ACGT 6 cut(s) 21, 34, 183, 234, 1488, 1948
MaeIII GTNAC 2 cut(s) 741, 1503
MalI GATC 4 cut(s) 251, 1227, 1628, 1994
MbiI CCGCTC 1 cut(s) 1360
MboI GATC 4 cut(s) 249, 1225, 1626, 1992
MboII GAAGA 9 cut(s) 334, 337, 395, 790, 842, 1178, 1196, 1294, 1688
MfeI CAATTG 2 cut(s) 272, 1532
MflI RGATCY 2 cut(s) 1626, 1992
MhlI GDGCHC 1 cut(s) 2165
MlsI TGGCCA 1 cut(s) 1750
MluNI TGGCCA 1 cut(s) 1750
MlyI GAGTC 4 cut(s) 727, 1151, 1307, 1613
MmeI TCCRAC 2 cut(s) 348, 663
Mox20I TGGCCA 1 cut(s) 1750
MroXI GAANNNNTTC 1 cut(s) 387
MscI TGGCCA 1 cut(s) 1750
MslI CAYNNNNRTG 2 cut(s) 567, 2066
Msp20I TGGCCA 1 cut(s) 1750
MspCI CTTAAG 1 cut(s) 418
MspI CCGG 4 cut(s) 438, 1268, 1634, 2150
MspR9I CCNGG 1 cut(s) 1483
MunI CAATTG 2 cut(s) 272, 1532
MvaI CCWGG 1 cut(s) 1483
MvnI CGCG 1 cut(s) 1872
MwoI GCNNNNNNNGC 5 cut(s) 47, 137, 202, 499, 2021
NcoI CCATGG 3 cut(s) 1422, 1495, 1751
NdeI CATATG 2 cut(s) 624, 1885
NdeII GATC 4 cut(s) 249, 1225, 1626, 1992
NlaIII CATG 9 cut(s) 229, 1156, 1216, 1426, 1499, 1558, 1650, 1755, 2179
NlaIV GGNNCC 4 cut(s) 910, 1893, 2163, 2164
NmuCI GTSAC 1 cut(s) 1503
NspI RCATGY 2 cut(s) 1650, 2179
NspV TTCGAA 1 cut(s) 381
OliI CACNNNNGTG 1 cut(s) 2066
PacI TTAATTAA 1 cut(s) 600
PciI ACATGT 1 cut(s) 1646
PdmI GAANNNNTTC 1 cut(s) 387
PfeI GAWTC 3 cut(s) 878, 948, 1016
PflFI GACNNNGTC 1 cut(s) 59
PflMI CCANNNNNTGG 1 cut(s) 796
PinAI ACCGGT 1 cut(s) 1633
PkrI GCNGC 5 cut(s) 581, 769, 864, 908, 2017
PleI GAGTC 4 cut(s) 726, 1151, 1307, 1613
PpsI GAGTC 4 cut(s) 726, 1151, 1307, 1613
PscI ACATGT 1 cut(s) 1646
PshBI ATTAAT 1 cut(s) 359
Psp1406I AACGTT 1 cut(s) 34
Psp6I CCWGG 1 cut(s) 1481
PspEI GGTNACC 1 cut(s) 741
PspFI CCCAGC 1 cut(s) 893
PspGI CCWGG 1 cut(s) 1481
PspN4I GGNNCC 4 cut(s) 910, 1893, 2163, 2164
PspOMI GGGCCC 1 cut(s) 2161
PspPI GGNCC 6 cut(s) 649, 787, 1362, 1539, 2161, 2162
PstNI CAGNNNCTG 1 cut(s) 1957
PsuI RGATCY 2 cut(s) 1626, 1992
PsyI GACNNNGTC 1 cut(s) 59
RsaI GTAC 7 cut(s) 12, 751, 826, 1411, 1602, 1810, 1869
RsaNI GTAC 7 cut(s) 11, 750, 825, 1410, 1601, 1809, 1868
RseI CAYNNNNRTG 2 cut(s) 567, 2066
SatI GCNGC 5 cut(s) 580, 768, 863, 907, 2016
Sau3AI GATC 4 cut(s) 249, 1225, 1626, 1992
Sau96I GGNCC 6 cut(s) 649, 787, 1362, 1539, 2161, 2162
ScaI AGTACT 2 cut(s) 12, 826
SchI GAGTC 4 cut(s) 727, 1151, 1307, 1613
ScrFI CCNGG 1 cut(s) 1483
SduI GDGCHC 1 cut(s) 2165
SfaNI GCATC 5 cut(s) 277, 571, 874, 1395, 1840
SfcI CTRYAG 2 cut(s) 1041, 1292
SfuI TTCGAA 1 cut(s) 381
SinI GGWCC 3 cut(s) 649, 1362, 1539
SmiMI CAYNNNNRTG 2 cut(s) 567, 2066
SmlI CTYRAG 3 cut(s) 418, 556, 943
SmoI CTYRAG 3 cut(s) 418, 556, 943
SpeI ACTAGT 1 cut(s) 13
SsiI CCGC 9 cut(s) 405, 541, 755, 863, 906, 1360, 1872, 2115, 2166
SspI AATATT 1 cut(s) 363
SspMI CTAG 5 cut(s) 14, 197, 255, 971, 1902
StyD4I CCNGG 1 cut(s) 1481
StyI CCWWGG 5 cut(s) 970, 1422, 1495, 1751, 1895
TaaI ACNGT 5 cut(s) 304, 521, 1918, 2068, 2144
TaiI ACGT 6 cut(s) 24, 37, 186, 237, 1491, 1951
TaqI TCGA 4 cut(s) 63, 136, 222, 381
TaqII GACCGA 1 cut(s) 852
TatI WGTACW 3 cut(s) 10, 824, 1808
TauI GCSGC 2 cut(s) 865, 909
TfiI GAWTC 3 cut(s) 878, 948, 1016
TscAI CASTG 4 cut(s) 594, 1269, 1585, 2044
TseFI GTSAC 1 cut(s) 1503
TseI GCWGC 3 cut(s) 579, 767, 2015
Tsp45I GTSAC 1 cut(s) 1503
TspDTI ATGAA 7 cut(s) 681, 791, 863, 1107, 1141, 1727, 1994
TspGWI ACGGA 4 cut(s) 305, 672, 1096, 1353
TspRI CASTG 4 cut(s) 594, 1269, 1585, 2044
Tth111I GACNNNGTC 1 cut(s) 59
Van91I CCANNNNNTGG 1 cut(s) 796
Vha464I CTTAAG 1 cut(s) 418
VpaK11BI GGWCC 3 cut(s) 649, 1362, 1539
VspI ATTAAT 1 cut(s) 359
XagI CCTNNNNNAGG 1 cut(s) 56
XapI RAATTY 3 cut(s) 387, 1192, 1848
XceI RCATGY 2 cut(s) 1650, 2179
XmaJI CCTAGG 1 cut(s) 970
XmiI GTMKAC 2 cut(s) 2139, 2187
XmnI GAANNNNTTC 1 cut(s) 387
XspI CTAG 5 cut(s) 14, 197, 255, 971, 1902
ZrmI AGTACT 2 cut(s) 12, 826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.