Rroxscaffold_2G00109860

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Reverse (-)
34079465 .. 34087148
7684 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00109860.1

Sequence Viewer

Length: 1425 bp
ATGGCTGACGCTTTCGTTTCCGTGCTACTGGAACAACTGGCTTCAATAACCTATCAACAAATAGAGAAAGAGGTGAGACTGGTTGTGGAGGTCGAGAAAGAAGTAGCCAAGATCACCAGCAATCTGAAAGCTATTCAGGCCGTGCTCGAGGATGCAGAGAAGAGGCAAGTCAAGGAGGCCATCGTCAGAGACTGGCTGGAGAAGCTCAAAGATGTGTCCTACGAGATGGACGACGTGCTTGATGAGTGGACTACTGAGATTCTCATACAACAAGTTGATCATCACCAACAAGGTGGTGAAGGTAGTAGTACTAGTACTGCTGCTGCTGCTGTTACCAAGAAGAAGGTATGTTTCTTCGTACCCTCCAACTGTTTTTGTTTTGGCCAAGTTAATCGAGTGATCCACCGCCGTGACATTGCTCGTAGAATACAAGATCTGAGTGATAGGTTGAATGAGATTGCTAGAGACAGACTAAGCTATAACTTTCTAAACACTGAAAGAGTCTTTGAACAACTTGAGAGGTTTGAGACTTCATCTTTGATCGATCTCTCCAAGACATTTGGGAGGGAAGATGAAACTGAAGTAGTTGTGGGCAAGTTGGTCGGCGAGAGTAGTCAAGAAGAGAGGAACCCTTTAGTTATCCCTATAGTAGGGATGGGGGGTATGGGAAAAACTACTCTTGCCCAGATAGTCTACAATAATGAAAAGGTGAAGTTAAATTTCACAAAAAGGATATGGGTTTGTGTTTCAGACCCCTTTAGTGAGATCAAAATTGCCAAAGCTATTATTGAAGATCTCAATAAAGATGATGCTCCAAATTCAAATGATTTGCAACCTTTATTGAAATGTATACAAAGAAACATTGAAGGCCAAAAGTTTCTCCTTGTGCTAGATGATGTGTGGACTGATGATGACAGAAAGTGGGAACAATTAAAGCTATCTTTACAAAGTGGTCTTGTAGGTAGTAGAATATTGGTGACCACACGGAAAGAGGAAGTTGCTATGATGATGGGAGTAACCTCTGCGAATATGATCCGTTTGGAGAAGTTGAGTGAACAATGTTGTTGGTCAATATTCTATCACATTGCTTTGGCCGAGAGGGAAAGAGATGAGTCTAAAGTGTTAGAATCTTTGGGTAAAGACATTGTAAAACGGTGTAAAGGTTTGCCTCTTCTTGCAAAGGTTTTAGGCGGTCTAATGCGCTCCAAGAAAACCAAGAAAGAATGGCAAGATGTTTTGAGTAGTAAGATATGGGGGTTAGACATAGTGGAGAAACAAGTTTTCCAACCGCTATTACTAAGTTATTATGATTTAACTCCAATGATCAAACGTTGTCTCTTATATTGTGTTACTTTCCCAAAAGACCATATAATTGACAAAGAAGTTTTGATTGAATTGTGGATGTCGAAGGTCTTCTTAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

474

Amino Acids

54.35

Weight (kDa)

5.72

Isoelectric Point (pI)

38.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 94 3.1e-23 Rx N-terminal domain
NB-ARC PF00931 190 - 366 3.3e-37 NB-ARC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 693, 850
AciI CCGC 3 cut(s) 406, 1191, 1289
AclI AACGTT 1 cut(s) 1330
AclWI GGATC 2 cut(s) 394, 1027
AcoI YGGCCR 2 cut(s) 382, 1092
AcsI RAATTY 2 cut(s) 718, 817
AcuI CTGAAG 1 cut(s) 600
AfaI GTAC 3 cut(s) 310, 316, 360
AfiI CCNNNNNNNGG 1 cut(s) 650
AgsI TTSAA 8 cut(s) 45, 451, 509, 791, 822, 844, 866, 1394
AhlI ACTAGT 1 cut(s) 311
AjiI CACGTC 1 cut(s) 235
AleI CACNNNNGTG 1 cut(s) 408
AluBI AGCT 5 cut(s) 131, 205, 477, 782, 937
AluI AGCT 5 cut(s) 131, 205, 477, 782, 937
Alw21I GWGCWC 1 cut(s) 147
Alw26I GTCTC 5 cut(s) 70, 183, 459, 521, 1340
AlwI GGATC 2 cut(s) 394, 1027
AlwNI CAGNNNCTG 1 cut(s) 192
Ama87I CYCGRG 1 cut(s) 146
AoxI GGCC 5 cut(s) 138, 177, 382, 868, 1092
ApeKI GCWGC 3 cut(s) 320, 323, 326
ApoI RAATTY 2 cut(s) 718, 817
ArsI GACNNNNNNTTYG 2 cut(s) 520, 552
Asp700I GAANNNNTTC 1 cut(s) 1412
AspLEI GCGC 1 cut(s) 1203
AsuHPI GGTGA 6 cut(s) 85, 106, 275, 308, 721, 988
AvaI CYCGRG 1 cut(s) 146
BalI TGGCCA 1 cut(s) 384
BbsI GAAGAC 1 cut(s) 1405
Bbv12I GWGCWC 1 cut(s) 147
BbvI GCAGC 3 cut(s) 307, 310, 313
BccI CCATC 4 cut(s) 188, 220, 649, 1003
BceAI ACGGC 2 cut(s) 125, 393
BcgI CGANNNNNNTGC 2 cut(s) 583, 617
BclI TGATCA 2 cut(s) 277, 1323
BcoDI GTCTC 5 cut(s) 70, 183, 459, 521, 1340
BcuI ACTAGT 1 cut(s) 311
BfaI CTAG 3 cut(s) 312, 462, 890
BfmI CTRYAG 1 cut(s) 645
BglII AGATCT 2 cut(s) 433, 793
BisI GCNGC 3 cut(s) 321, 324, 327
BlsI GCNGC 3 cut(s) 322, 325, 328
BmcAI AGTACT 2 cut(s) 310, 316
BmeT110I CYCGRG 1 cut(s) 146
BmgBI CACGTC 1 cut(s) 235
BmiI GGNNCC 1 cut(s) 629
BmsI GCATC 2 cut(s) 142, 799
BpiI GAAGAC 1 cut(s) 1405
BpmI CTGGAG 1 cut(s) 218
BpuEI CTTGAG 1 cut(s) 536
Bsa29I ATCGAT 1 cut(s) 543
Bsc4I CCNNNNNNNGG 1 cut(s) 650
Bse1I ACTGG 4 cut(s) 33, 42, 84, 197
Bse3DI GCAATG 2 cut(s) 414, 1083
BseCI ATCGAT 1 cut(s) 543
BseGI GGATG 3 cut(s) 157, 660, 1407
BseLI CCNNNNNNNGG 1 cut(s) 650
BseMI GCAATG 2 cut(s) 414, 1083
BseMII CTCAG 2 cut(s) 246, 428
BseNI ACTGG 4 cut(s) 33, 42, 84, 197
BseXI GCAGC 3 cut(s) 307, 310, 313
BshFI GGCC 5 cut(s) 140, 179, 384, 870, 1094
BshVI ATCGAT 1 cut(s) 543
BsiHKAI GWGCWC 1 cut(s) 147
BsiHKCI CYCGRG 1 cut(s) 146
BslI CCNNNNNNNGG 1 cut(s) 650
BsmAI GTCTC 5 cut(s) 70, 183, 459, 521, 1340
BsnI GGCC 5 cut(s) 140, 179, 384, 870, 1094
BsoBI CYCGRG 1 cut(s) 146
Bsp1286I GDGCHC 1 cut(s) 147
BspACI CCGC 3 cut(s) 406, 1191, 1289
BspANI GGCC 5 cut(s) 140, 179, 384, 870, 1094
BspCNI CTCAG 2 cut(s) 247, 429
BspDI ATCGAT 1 cut(s) 543
BspLI GGNNCC 1 cut(s) 629
BspPI GGATC 2 cut(s) 394, 1027
BsrDI GCAATG 2 cut(s) 414, 1083
BsrI ACTGG 4 cut(s) 33, 42, 84, 197
BssNAI GTATAC 1 cut(s) 851
Bst1107I GTATAC 1 cut(s) 851
Bst4CI ACNGT 2 cut(s) 371, 1155
Bst6I CTCTTC 3 cut(s) 155, 615, 1176
BstDEI CTNAG 5 cut(s) 255, 437, 473, 1298, 1417
BstEII GGTNACC 1 cut(s) 976
BstENI CCTNNNNNAGG 1 cut(s) 648
BstF5I GGATG 3 cut(s) 157, 660, 1407
BstHHI GCGC 1 cut(s) 1203
BstMAI GTCTC 5 cut(s) 70, 183, 459, 521, 1340
BstMWI GCNNNNNNNGC 3 cut(s) 137, 202, 326
BstPI GGTNACC 1 cut(s) 976
BstSFI CTRYAG 1 cut(s) 645
BstV1I GCAGC 3 cut(s) 307, 310, 313
BstV2I GAAGAC 1 cut(s) 1405
BstX2I RGATCY 2 cut(s) 433, 793
BstXI CCANNNNNNTGG 1 cut(s) 293
BstYI RGATCY 2 cut(s) 433, 793
BstZ17I GTATAC 1 cut(s) 851
Bsu15I ATCGAT 1 cut(s) 543
BsuRI GGCC 5 cut(s) 140, 179, 384, 870, 1094
BsuTUI ATCGAT 1 cut(s) 543
BtrI CACGTC 1 cut(s) 235
BtsCI GGATG 3 cut(s) 157, 660, 1407
BtsIMutI CAGTG 1 cut(s) 492
CaiI CAGNNNCTG 1 cut(s) 192
CfoI GCGC 1 cut(s) 1203
ClaI ATCGAT 1 cut(s) 543
CseI GACGC 1 cut(s) 17
Csp6I GTAC 3 cut(s) 309, 315, 359
CviQI GTAC 3 cut(s) 309, 315, 359
DdeI CTNAG 5 cut(s) 255, 437, 473, 1298, 1417
EaeI YGGCCR 2 cut(s) 382, 1092
Eam1104I CTCTTC 3 cut(s) 155, 615, 1176
EarI CTCTTC 3 cut(s) 155, 615, 1176
Eco57I CTGAAG 1 cut(s) 600
Eco88I CYCGRG 1 cut(s) 146
Eco91I GGTNACC 1 cut(s) 976
EcoNI CCTNNNNNAGG 1 cut(s) 648
EcoO65I GGTNACC 1 cut(s) 976
FalI AAGNNNNNCTT 1 cut(s) 1400
FbaI TGATCA 2 cut(s) 277, 1323
FblI GTMKAC 2 cut(s) 693, 850
Fnu4HI GCNGC 3 cut(s) 321, 324, 327
FokI GGATG 3 cut(s) 164, 667, 1414
Fsp4HI GCNGC 3 cut(s) 321, 324, 327
FspBI CTAG 3 cut(s) 312, 462, 890
GlaI GCGC 1 cut(s) 1202
GluI GCNGC 3 cut(s) 321, 324, 327
GsuI CTGGAG 1 cut(s) 218
HaeIII GGCC 5 cut(s) 140, 179, 384, 870, 1094
HgaI GACGC 1 cut(s) 17
HhaI GCGC 1 cut(s) 1203
Hin6I GCGC 1 cut(s) 1201
HinP1I GCGC 1 cut(s) 1201
HinfI GANTC 4 cut(s) 259, 501, 1112, 1127
HphI GGTGA 6 cut(s) 85, 106, 275, 308, 721, 988
Hpy166II GTNNAC 5 cut(s) 249, 694, 851, 903, 1055
Hpy188I TCNGA 4 cut(s) 126, 188, 438, 751
Hpy188III TCNNGA 2 cut(s) 94, 617
Hpy8I GTNNAC 5 cut(s) 249, 694, 851, 903, 1055
Hpy99I CGWCG 1 cut(s) 236
HpyAV CCTTC 4 cut(s) 293, 337, 860, 1402
HpyCH4III ACNGT 2 cut(s) 371, 1155
HpyCH4IV ACGT 2 cut(s) 234, 1330
HpyCH4V TGCA 3 cut(s) 155, 832, 1178
HpyF10VI GCNNNNNNNGC 3 cut(s) 137, 202, 326
HpyF3I CTNAG 5 cut(s) 255, 437, 473, 1298, 1417
HpySE526I ACGT 2 cut(s) 234, 1330
HspAI GCGC 1 cut(s) 1201
Ksp22I TGATCA 2 cut(s) 277, 1323
LmnI GCTCC 2 cut(s) 817, 1208
LpnPI CCDG 8 cut(s) 14, 23, 65, 122, 130, 178, 182, 698
Lsp1109I GCAGC 3 cut(s) 307, 310, 313
LweI GCATC 2 cut(s) 142, 799
MaeI CTAG 3 cut(s) 312, 462, 890
MaeII ACGT 2 cut(s) 234, 1330
MaeIII GTNAC 5 cut(s) 331, 410, 976, 1015, 1348
MboII GAAGA 8 cut(s) 172, 346, 352, 581, 632, 803, 1163, 1405
MflI RGATCY 2 cut(s) 433, 793
MhlI GDGCHC 1 cut(s) 147
MlsI TGGCCA 1 cut(s) 384
MluCI AATT 6 cut(s) 718, 771, 817, 929, 1371, 1394
MluNI TGGCCA 1 cut(s) 384
MlyI GAGTC 2 cut(s) 510, 1121
MmeI TCCRAC 2 cut(s) 390, 1309
Mox20I TGGCCA 1 cut(s) 384
MroXI GAANNNNTTC 1 cut(s) 1412
MscI TGGCCA 1 cut(s) 384
MseI TTAA 4 cut(s) 390, 716, 932, 1313
MslI CAYNNNNRTG 1 cut(s) 408
Msp20I TGGCCA 1 cut(s) 384
MwoI GCNNNNNNNGC 3 cut(s) 137, 202, 326
NlaIV GGNNCC 1 cut(s) 629
NmeAIII GCCGAG 1 cut(s) 1120
NmuCI GTSAC 2 cut(s) 410, 976
OliI CACNNNNGTG 1 cut(s) 408
PaeR7I CTCGAG 1 cut(s) 146
PcsI WCGNNNNNNNCGW 1 cut(s) 228
PdmI GAANNNNTTC 1 cut(s) 1412
PfeI GAWTC 2 cut(s) 259, 1127
PkrI GCNGC 3 cut(s) 322, 325, 328
PleI GAGTC 2 cut(s) 509, 1120
PpsI GAGTC 2 cut(s) 509, 1120
Psp1406I AACGTT 1 cut(s) 1330
PspEI GGTNACC 1 cut(s) 976
PspN4I GGNNCC 1 cut(s) 629
PspXI VCTCGAGB 1 cut(s) 146
PstNI CAGNNNCTG 1 cut(s) 192
PsuI RGATCY 2 cut(s) 433, 793
RsaI GTAC 3 cut(s) 310, 316, 360
RsaNI GTAC 3 cut(s) 309, 315, 359
RseI CAYNNNNRTG 1 cut(s) 408
SaqAI TTAA 4 cut(s) 390, 716, 932, 1313
SatI GCNGC 3 cut(s) 321, 324, 327
ScaI AGTACT 2 cut(s) 310, 316
SchI GAGTC 2 cut(s) 510, 1121
SduI GDGCHC 1 cut(s) 147
SfaNI GCATC 2 cut(s) 142, 799
SfcI CTRYAG 1 cut(s) 645
Sfr274I CTCGAG 1 cut(s) 146
SlaI CTCGAG 1 cut(s) 146
SmiMI CAYNNNNRTG 1 cut(s) 408
SmlI CTYRAG 2 cut(s) 146, 515
SmoI CTYRAG 2 cut(s) 146, 515
SpeI ACTAGT 1 cut(s) 311
Sse9I AATT 6 cut(s) 718, 771, 817, 929, 1371, 1394
SsiI CCGC 3 cut(s) 406, 1191, 1289
SspI AATATT 2 cut(s) 972, 1074
SspMI CTAG 3 cut(s) 312, 462, 890
TaaI ACNGT 2 cut(s) 371, 1155
TaiI ACGT 2 cut(s) 237, 1333
TaqI TCGA 5 cut(s) 93, 147, 394, 543, 1406
TasI AATT 6 cut(s) 718, 771, 817, 929, 1371, 1394
TatI WGTACW 2 cut(s) 308, 314
TfiI GAWTC 2 cut(s) 259, 1127
Tru1I TTAA 4 cut(s) 390, 716, 932, 1313
Tru9I TTAA 4 cut(s) 390, 716, 932, 1313
TscAI CASTG 1 cut(s) 499
TseFI GTSAC 2 cut(s) 410, 976
TseI GCWGC 3 cut(s) 320, 323, 326
Tsp45I GTSAC 2 cut(s) 410, 976
TspDTI ATGAA 3 cut(s) 522, 588, 717
TspGWI ACGGA 3 cut(s) 10, 1000, 1025
TspRI CASTG 1 cut(s) 499
XagI CCTNNNNNAGG 1 cut(s) 648
XapI RAATTY 2 cut(s) 718, 817
XhoI CTCGAG 1 cut(s) 146
XmiI GTMKAC 2 cut(s) 693, 850
XmnI GAANNNNTTC 1 cut(s) 1412
XspI CTAG 3 cut(s) 312, 462, 890
ZrmI AGTACT 2 cut(s) 310, 316
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.