disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 6 - 96 | 1.5e-24 | Rx N-terminal domain |
| NB-ARC | PF00931 | 185 - 352 | 7.6e-38 | NB-ARC domain |
| WHD_DRP | PF23559 | 438 - 504 | 8.6e-17 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 534 - 858 | 2.3e-19 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 674 - 784 | 2e-20 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1596 |
| Acc36I | ACCTGC | 1 cut(s) | 1842 |
| AccB1I | GGYRCC | 1 cut(s) | 2228 |
| AccII | CGCG | 1 cut(s) | 378 |
| AciI | CCGC | 7 cut(s) | 118, 361, 462, 1708, 2183, 2226, 2470 |
| AclI | AACGTT | 3 cut(s) | 21, 190, 1291 |
| AclWI | GGATC | 2 cut(s) | 257, 2725 |
| AcoI | YGGCCR | 1 cut(s) | 2734 |
| AcsI | RAATTY | 2 cut(s) | 1636, 1731 |
| AcuI | CTGAAG | 2 cut(s) | 27, 231 |
| AcyI | GRCGYC | 2 cut(s) | 2229, 2327 |
| AfaI | GTAC | 4 cut(s) | 318, 1334, 1609, 1668 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 58, 124, 614, 2315 |
| AjnI | CCWGG | 1 cut(s) | 1815 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 576, 608 |
| Alw21I | GWGCWC | 2 cut(s) | 925, 2274 |
| Alw26I | GTCTC | 8 cut(s) | 88, 262, 715, 1727, 1733, 1871, 2371, 2637 |
| AlwI | GGATC | 2 cut(s) | 257, 2725 |
| Ama87I | CYCGRG | 2 cut(s) | 1736, 2359 |
| AoxI | GGCC | 3 cut(s) | 1645, 2676, 2734 |
| ApeKI | GCWGC | 7 cut(s) | 386, 562, 1136, 1821, 1857, 2093, 2472 |
| ApoI | RAATTY | 2 cut(s) | 1636, 1731 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 132 |
| AspLEI | GCGC | 3 cut(s) | 1164, 1814, 2231 |
| AspS9I | GGNCC | 4 cut(s) | 469, 715, 1646, 2676 |
| AsuC2I | CCSGG | 3 cut(s) | 2360, 2361, 2733 |
| AsuHPI | GGTGA | 8 cut(s) | 955, 1577, 2015, 2099, 2153, 2266, 2455, 2678 |
| AsuII | TTCGAA | 1 cut(s) | 262 |
| AvaI | CYCGRG | 2 cut(s) | 1736, 2359 |
| AvaII | GGWCC | 2 cut(s) | 469, 715 |
| BanI | GGYRCC | 1 cut(s) | 2228 |
| BanII | GRGCYC | 1 cut(s) | 875 |
| BbsI | GAAGAC | 4 cut(s) | 2244, 2418, 2603, 2718 |
| Bbv12I | GWGCWC | 2 cut(s) | 925, 2274 |
| BbvI | GCAGC | 7 cut(s) | 373, 549, 1123, 1833, 1844, 2105, 2459 |
| BccI | CCATC | 5 cut(s) | 268, 613, 1994, 2396, 2708 |
| BceAI | ACGGC | 1 cut(s) | 1105 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 368, 402 |
| BciT130I | CCWGG | 1 cut(s) | 1817 |
| BclI | TGATCA | 2 cut(s) | 883, 900 |
| BcnI | CCSGG | 3 cut(s) | 2360, 2361, 2733 |
| BcoDI | GTCTC | 8 cut(s) | 88, 262, 715, 1727, 1733, 1871, 2371, 2637 |
| BfaI | CTAG | 7 cut(s) | 465, 1110, 1863, 1979, 2214, 2663, 2752 |
| BfmI | CTRYAG | 3 cut(s) | 1620, 2218, 2606 |
| BfoI | RGCGCY | 2 cut(s) | 1815, 2232 |
| BfuAI | ACCTGC | 1 cut(s) | 1842 |
| BglII | AGATCT | 3 cut(s) | 1966, 2026, 2627 |
| BisI | GCNGC | 9 cut(s) | 387, 563, 1137, 1822, 1858, 2094, 2183, 2227, 2473 |
| BlsI | GCNGC | 9 cut(s) | 388, 564, 1138, 1823, 1859, 2095, 2184, 2228, 2474 |
| Bme1390I | CCNGG | 4 cut(s) | 1817, 2360, 2361, 2733 |
| Bme18I | GGWCC | 2 cut(s) | 469, 715 |
| BmeT110I | CYCGRG | 2 cut(s) | 1736, 2359 |
| BmgT120I | GGNCC | 4 cut(s) | 469, 715, 1646, 2676 |
| BmiI | GGNNCC | 6 cut(s) | 470, 471, 594, 717, 872, 2230 |
| BmrFI | CCNGG | 4 cut(s) | 1817, 2360, 2361, 2733 |
| BmsI | GCATC | 6 cut(s) | 142, 1009, 1456, 1915, 2194, 2343 |
| BpiI | GAAGAC | 4 cut(s) | 2244, 2418, 2603, 2718 |
| BpmI | CTGGAG | 2 cut(s) | 167, 1263 |
| Bpu14I | TTCGAA | 1 cut(s) | 262 |
| BpuEI | CTTGAG | 7 cut(s) | 50, 240, 726, 1717, 1921, 2284, 2644 |
| BpuMI | CCSGG | 3 cut(s) | 2360, 2361, 2733 |
| BsaAI | YACGTR | 2 cut(s) | 914, 1607 |
| BsaHI | GRCGYC | 2 cut(s) | 2229, 2327 |
| BsaI | GGTCTC | 2 cut(s) | 88, 2637 |
| BsaJI | CCNNGG | 4 cut(s) | 1560, 1815, 1816, 2359 |
| BsaWI | WCCGGW | 1 cut(s) | 1781 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 98, 128, 831, 861 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 58, 124, 614, 2315 |
| Bse118I | RCCGGY | 1 cut(s) | 2736 |
| Bse1I | ACTGG | 2 cut(s) | 84, 2328 |
| Bse3DI | GCAATG | 2 cut(s) | 818, 1446 |
| BseBI | CCWGG | 1 cut(s) | 1817 |
| BseDI | CCNNGG | 4 cut(s) | 1560, 1815, 1816, 2359 |
| BseGI | GGATG | 9 cut(s) | 157, 247, 624, 1066, 1368, 1519, 1628, 2185, 2691 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 58, 124, 614, 2315 |
| BseMI | GCAATG | 2 cut(s) | 818, 1446 |
| BseMII | CTCAG | 2 cut(s) | 188, 2555 |
| BseNI | ACTGG | 2 cut(s) | 84, 2328 |
| BseRI | GAGGAG | 4 cut(s) | 81, 322, 974, 2684 |
| BseX3I | CGGCCG | 1 cut(s) | 2734 |
| BseXI | GCAGC | 7 cut(s) | 373, 549, 1123, 1833, 1844, 2105, 2459 |
| BseYI | CCCAGC | 1 cut(s) | 1808 |
| Bsh1236I | CGCG | 1 cut(s) | 378 |
| Bsh1285I | CGRYCG | 2 cut(s) | 48, 2737 |
| BshFI | GGCC | 3 cut(s) | 1647, 2678, 2736 |
| BshNI | GGYRCC | 1 cut(s) | 2228 |
| BsiEI | CGRYCG | 2 cut(s) | 48, 2737 |
| BsiHKAI | GWGCWC | 2 cut(s) | 925, 2274 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1736, 2359 |
| BsiSI | CCGG | 5 cut(s) | 1782, 2360, 2582, 2733, 2737 |
| BslFI | GGGAC | 3 cut(s) | 455, 1979, 2314 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 58, 124, 614, 2315 |
| BsmAI | GTCTC | 8 cut(s) | 88, 262, 715, 1727, 1733, 1871, 2371, 2637 |
| BsmBI | CGTCTC | 1 cut(s) | 1733 |
| BsmFI | GGGAC | 3 cut(s) | 455, 1979, 2314 |
| BsmI | GAATGC | 1 cut(s) | 1387 |
| BsnI | GGCC | 3 cut(s) | 1647, 2678, 2736 |
| Bso31I | GGTCTC | 2 cut(s) | 88, 2637 |
| BsoBI | CYCGRG | 2 cut(s) | 1736, 2359 |
| Bsp119I | TTCGAA | 1 cut(s) | 262 |
| Bsp1286I | GDGCHC | 3 cut(s) | 875, 925, 2274 |
| Bsp1407I | TGTACA | 1 cut(s) | 1332 |
| Bsp68I | TCGCGA | 1 cut(s) | 378 |
| BspACI | CCGC | 7 cut(s) | 118, 361, 462, 1708, 2183, 2226, 2470 |
| BspANI | GGCC | 3 cut(s) | 1647, 2678, 2736 |
| BspCNI | CTCAG | 2 cut(s) | 189, 2554 |
| BspFNI | CGCG | 1 cut(s) | 378 |
| BspHI | TCATGA | 2 cut(s) | 1180, 1267 |
| BspLI | GGNNCC | 6 cut(s) | 470, 471, 594, 717, 872, 2230 |
| BspMI | ACCTGC | 1 cut(s) | 1842 |
| BspPI | GGATC | 2 cut(s) | 257, 2725 |
| BspT104I | TTCGAA | 1 cut(s) | 262 |
| BspT107I | GGYRCC | 1 cut(s) | 2228 |
| BspTNI | GGTCTC | 2 cut(s) | 88, 2637 |
| BsrDI | GCAATG | 2 cut(s) | 818, 1446 |
| BsrFI | RCCGGY | 1 cut(s) | 2736 |
| BsrGI | TGTACA | 1 cut(s) | 1332 |
| BsrI | ACTGG | 2 cut(s) | 84, 2328 |
| BssAI | RCCGGY | 1 cut(s) | 2736 |
| BssECI | CCNNGG | 4 cut(s) | 1560, 1815, 1816, 2359 |
| BssNI | GRCGYC | 2 cut(s) | 2229, 2327 |
| Bst2UI | CCWGG | 1 cut(s) | 1817 |
| Bst4CI | ACNGT | 5 cut(s) | 46, 184, 843, 1049, 2297 |
| Bst6I | CTCTTC | 2 cut(s) | 510, 720 |
| BstACI | GRCGYC | 2 cut(s) | 2229, 2327 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1843 |
| BstAUI | TGTACA | 1 cut(s) | 1332 |
| BstBAI | YACGTR | 2 cut(s) | 914, 1607 |
| BstBI | TTCGAA | 1 cut(s) | 262 |
| BstC8I | GCNNGC | 4 cut(s) | 560, 1191, 1554, 2738 |
| BstDEI | CTNAG | 8 cut(s) | 197, 309, 566, 1546, 1682, 2176, 2279, 2541 |
| BstEII | GGTNACC | 1 cut(s) | 943 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 612, 2313 |
| BstF5I | GGATG | 9 cut(s) | 157, 247, 624, 1066, 1368, 1519, 1628, 2185, 2691 |
| BstFNI | CGCG | 1 cut(s) | 378 |
| BstH2I | RGCGCY | 2 cut(s) | 1815, 2232 |
| BstHHI | GCGC | 3 cut(s) | 1164, 1814, 2231 |
| BstMAI | GTCTC | 8 cut(s) | 88, 262, 715, 1727, 1733, 1871, 2371, 2637 |
| BstMCI | CGRYCG | 2 cut(s) | 48, 2737 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 47, 117, 137, 1161, 1818, 1843, 2223 |
| BstNI | CCWGG | 1 cut(s) | 1817 |
| BstNSI | RCATGY | 4 cut(s) | 296, 1497, 1556, 2479 |
| BstPI | GGTNACC | 1 cut(s) | 943 |
| BstSCI | CCNGG | 4 cut(s) | 1815, 2358, 2359, 2731 |
| BstSFI | CTRYAG | 3 cut(s) | 1620, 2218, 2606 |
| BstSNI | TACGTA | 2 cut(s) | 914, 1607 |
| BstUI | CGCG | 1 cut(s) | 378 |
| BstV1I | GCAGC | 7 cut(s) | 373, 549, 1123, 1833, 1844, 2105, 2459 |
| BstV2I | GAAGAC | 4 cut(s) | 2244, 2418, 2603, 2718 |
| BstX2I | RGATCY | 3 cut(s) | 1966, 2026, 2627 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1816 |
| BstYI | RGATCY | 3 cut(s) | 1966, 2026, 2627 |
| BstZI | CGGCCG | 1 cut(s) | 2734 |
| BsuRI | GGCC | 3 cut(s) | 1647, 2678, 2736 |
| BtgZI | GCGATG | 1 cut(s) | 2366 |
| BtsCI | GGATG | 9 cut(s) | 157, 247, 624, 1066, 1368, 1519, 1628, 2185, 2691 |
| BtsI | GCAGTG | 1 cut(s) | 2576 |
| BtsIMutI | CAGTG | 1 cut(s) | 2576 |
| BtuMI | TCGCGA | 1 cut(s) | 378 |
| BveI | ACCTGC | 1 cut(s) | 1842 |
| Cac8I | GCNNGC | 4 cut(s) | 560, 1191, 1554, 2738 |
| CciI | TCATGA | 2 cut(s) | 1180, 1267 |
| CfoI | GCGC | 3 cut(s) | 1164, 1814, 2231 |
| Cfr10I | RCCGGY | 1 cut(s) | 2736 |
| Cfr13I | GGNCC | 4 cut(s) | 469, 715, 1646, 2676 |
| Cfr9I | CCCGGG | 1 cut(s) | 2359 |
| CseI | GACGC | 2 cut(s) | 817, 2316 |
| Csp6I | GTAC | 4 cut(s) | 317, 1333, 1608, 1667 |
| CviQI | GTAC | 4 cut(s) | 317, 1333, 1608, 1667 |
| DdeI | CTNAG | 8 cut(s) | 197, 309, 566, 1546, 1682, 2176, 2279, 2541 |
| DinI | GGCGCC | 1 cut(s) | 2230 |
| DraI | TTTAAA | 1 cut(s) | 1200 |
| EaeI | YGGCCR | 1 cut(s) | 2734 |
| EagI | CGGCCG | 1 cut(s) | 2734 |
| Eam1104I | CTCTTC | 2 cut(s) | 510, 720 |
| EarI | CTCTTC | 2 cut(s) | 510, 720 |
| EclXI | CGGCCG | 1 cut(s) | 2734 |
| Eco105I | TACGTA | 2 cut(s) | 914, 1607 |
| Eco24I | GRGCYC | 1 cut(s) | 875 |
| Eco31I | GGTCTC | 2 cut(s) | 88, 2637 |
| Eco47I | GGWCC | 2 cut(s) | 469, 715 |
| Eco52I | CGGCCG | 1 cut(s) | 2734 |
| Eco57I | CTGAAG | 2 cut(s) | 27, 231 |
| Eco88I | CYCGRG | 2 cut(s) | 1736, 2359 |
| Eco91I | GGTNACC | 1 cut(s) | 943 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 612, 2313 |
| EcoO109I | RGGNCCY | 1 cut(s) | 469 |
| EcoO65I | GGTNACC | 1 cut(s) | 943 |
| EcoRII | CCWGG | 1 cut(s) | 1815 |
| EcoT22I | ATGCAT | 1 cut(s) | 1024 |
| EcoT38I | GRGCYC | 1 cut(s) | 875 |
| EgeI | GGCGCC | 1 cut(s) | 2230 |
| EheI | GGCGCC | 1 cut(s) | 2230 |
| Esp3I | CGTCTC | 1 cut(s) | 1733 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 403, 435, 2043, 2075 |
| FaqI | GGGAC | 3 cut(s) | 455, 1979, 2314 |
| FauI | CCCGC | 2 cut(s) | 125, 1701 |
| FbaI | TGATCA | 2 cut(s) | 883, 900 |
| Fnu4HI | GCNGC | 9 cut(s) | 387, 563, 1137, 1822, 1858, 2094, 2183, 2227, 2473 |
| FokI | GGATG | 9 cut(s) | 164, 254, 631, 1073, 1375, 1526, 1615, 2172, 2678 |
| FriOI | GRGCYC | 1 cut(s) | 875 |
| Fsp4HI | GCNGC | 9 cut(s) | 387, 563, 1137, 1822, 1858, 2094, 2183, 2227, 2473 |
| FspBI | CTAG | 7 cut(s) | 465, 1110, 1863, 1979, 2214, 2663, 2752 |
| GlaI | GCGC | 3 cut(s) | 1163, 1813, 2230 |
| GluI | GCNGC | 9 cut(s) | 387, 563, 1137, 1822, 1858, 2094, 2183, 2227, 2473 |
| GsaI | CCCAGC | 1 cut(s) | 1812 |
| GsuI | CTGGAG | 2 cut(s) | 167, 1263 |
| HaeII | RGCGCY | 2 cut(s) | 1815, 2232 |
| HaeIII | GGCC | 3 cut(s) | 1647, 2678, 2736 |
| HapII | CCGG | 5 cut(s) | 1782, 2360, 2582, 2733, 2737 |
| HgaI | GACGC | 2 cut(s) | 817, 2316 |
| HhaI | GCGC | 3 cut(s) | 1164, 1814, 2231 |
| Hin1I | GRCGYC | 2 cut(s) | 2229, 2327 |
| Hin6I | GCGC | 3 cut(s) | 1162, 1812, 2229 |
| HinP1I | GCGC | 3 cut(s) | 1162, 1812, 2229 |
| HincII | GTYRAC | 3 cut(s) | 19, 106, 2547 |
| HindII | GTYRAC | 3 cut(s) | 19, 106, 2547 |
| HindIII | AAGCTT | 1 cut(s) | 2450 |
| HpaI | GTTAAC | 1 cut(s) | 19 |
| HpaII | CCGG | 5 cut(s) | 1782, 2360, 2582, 2733, 2737 |
| HphI | GGTGA | 8 cut(s) | 955, 1577, 2015, 2099, 2153, 2266, 2455, 2678 |
| Hpy166II | GTNNAC | 7 cut(s) | 19, 106, 203, 839, 1333, 2107, 2547 |
| Hpy188I | TCNGA | 5 cut(s) | 715, 883, 2031, 2642, 2722 |
| Hpy8I | GTNNAC | 7 cut(s) | 19, 106, 203, 839, 1333, 2107, 2547 |
| Hpy99I | CGWCG | 4 cut(s) | 378, 2419, 2422, 2425 |
| HpyAV | CCTTC | 8 cut(s) | 307, 575, 1000, 1107, 1784, 2003, 2242, 2476 |
| HpyCH4III | ACNGT | 5 cut(s) | 46, 184, 843, 1049, 2297 |
| HpyCH4IV | ACGT | 8 cut(s) | 21, 190, 234, 319, 913, 1145, 1291, 1606 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 47, 117, 137, 1161, 1818, 1843, 2223 |
| HpyF3I | CTNAG | 8 cut(s) | 197, 309, 566, 1546, 1682, 2176, 2279, 2541 |
| HpySE526I | ACGT | 8 cut(s) | 21, 190, 234, 319, 913, 1145, 1291, 1606 |
| Hsp92I | GRCGYC | 2 cut(s) | 2229, 2327 |
| HspAI | GCGC | 3 cut(s) | 1162, 1812, 2229 |
| KasI | GGCGCC | 1 cut(s) | 2228 |
| KflI | GGGWCCC | 1 cut(s) | 469 |
| KroI | GCCGGC | 1 cut(s) | 2736 |
| KroNI | GCCGGC | 1 cut(s) | 2738 |
| Ksp22I | TGATCA | 2 cut(s) | 883, 900 |
| KspAI | GTTAAC | 1 cut(s) | 19 |
| LmnI | GCTCC | 2 cut(s) | 870, 2361 |
| Lsp1109I | GCAGC | 7 cut(s) | 373, 549, 1123, 1833, 1844, 2105, 2459 |
| LweI | GCATC | 6 cut(s) | 142, 1009, 1456, 1915, 2194, 2343 |
| MaeI | CTAG | 7 cut(s) | 465, 1110, 1863, 1979, 2214, 2663, 2752 |
| MaeII | ACGT | 8 cut(s) | 21, 190, 234, 319, 913, 1145, 1291, 1606 |
| MaeIII | GTNAC | 3 cut(s) | 169, 943, 1365 |
| MfeI | CAATTG | 4 cut(s) | 423, 1670, 2117, 2550 |
| MflI | RGATCY | 3 cut(s) | 1966, 2026, 2627 |
| MhlI | GDGCHC | 3 cut(s) | 875, 925, 2274 |
| Mly113I | GGCGCC | 1 cut(s) | 2229 |
| MlyI | GAGTC | 4 cut(s) | 1270, 1667, 2065, 2373 |
| MmeI | TCCRAC | 2 cut(s) | 1776, 2001 |
| Mph1103I | ATGCAT | 1 cut(s) | 1024 |
| MroNI | GCCGGC | 1 cut(s) | 2736 |
| MroXI | GAANNNNTTC | 1 cut(s) | 132 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1911 |
| MspA1I | CMGCKG | 1 cut(s) | 2472 |
| MspI | CCGG | 5 cut(s) | 1782, 2360, 2582, 2733, 2737 |
| MspR9I | CCNGG | 4 cut(s) | 1817, 2360, 2361, 2733 |
| MunI | CAATTG | 4 cut(s) | 423, 1670, 2117, 2550 |
| Mva1269I | GAATGC | 1 cut(s) | 1387 |
| MvaI | CCWGG | 1 cut(s) | 1817 |
| MvnI | CGCG | 1 cut(s) | 378 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 47, 117, 137, 1161, 1818, 1843, 2223 |
| NaeI | GCCGGC | 1 cut(s) | 2738 |
| NarI | GGCGCC | 1 cut(s) | 2229 |
| NciI | CCSGG | 3 cut(s) | 2360, 2361, 2733 |
| NgoMIV | GCCGGC | 1 cut(s) | 2736 |
| NlaIV | GGNNCC | 6 cut(s) | 470, 471, 594, 717, 872, 2230 |
| NmuCI | GTSAC | 3 cut(s) | 169, 943, 1365 |
| NruI | TCGCGA | 1 cut(s) | 378 |
| NsiI | ATGCAT | 1 cut(s) | 1024 |
| NspI | RCATGY | 4 cut(s) | 296, 1497, 1556, 2479 |
| NspV | TTCGAA | 1 cut(s) | 262 |
| PaeI | GCATGC | 1 cut(s) | 1556 |
| PagI | TCATGA | 2 cut(s) | 1180, 1267 |
| PasI | CCCWGGG | 1 cut(s) | 1816 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2420 |
| PctI | GAATGC | 1 cut(s) | 1387 |
| PdiI | GCCGGC | 1 cut(s) | 2738 |
| PdmI | GAANNNNTTC | 1 cut(s) | 132 |
| PfeI | GAWTC | 7 cut(s) | 1177, 1228, 1342, 1568, 1625, 2198, 2336 |
| PkrI | GCNGC | 9 cut(s) | 388, 564, 1138, 1823, 1859, 2095, 2184, 2228, 2474 |
| PleI | GAGTC | 4 cut(s) | 1270, 1666, 2064, 2372 |
| PluTI | GGCGCC | 1 cut(s) | 2232 |
| PpsI | GAGTC | 4 cut(s) | 1270, 1666, 2064, 2372 |
| Ppu21I | YACGTR | 2 cut(s) | 914, 1607 |
| PpuMI | RGGWCCY | 1 cut(s) | 469 |
| PsiI | TTATAA | 1 cut(s) | 1596 |
| Psp1406I | AACGTT | 3 cut(s) | 21, 190, 1291 |
| Psp5II | RGGWCCY | 1 cut(s) | 469 |
| Psp6I | CCWGG | 1 cut(s) | 1815 |
| PspEI | GGTNACC | 1 cut(s) | 943 |
| PspFI | CCCAGC | 1 cut(s) | 1808 |
| PspGI | CCWGG | 1 cut(s) | 1815 |
| PspN4I | GGNNCC | 6 cut(s) | 470, 471, 594, 717, 872, 2230 |
| PspPI | GGNCC | 4 cut(s) | 469, 715, 1646, 2676 |
| PspPPI | RGGWCCY | 1 cut(s) | 469 |
| PsuI | RGATCY | 3 cut(s) | 1966, 2026, 2627 |
| RruI | TCGCGA | 1 cut(s) | 378 |
| RsaI | GTAC | 4 cut(s) | 318, 1334, 1609, 1668 |
| RsaNI | GTAC | 4 cut(s) | 317, 1333, 1608, 1667 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1911 |
| SatI | GCNGC | 9 cut(s) | 387, 563, 1137, 1822, 1858, 2094, 2183, 2227, 2473 |
| Sau96I | GGNCC | 4 cut(s) | 469, 715, 1646, 2676 |
| SchI | GAGTC | 4 cut(s) | 1270, 1667, 2065, 2373 |
| ScrFI | CCNGG | 4 cut(s) | 1817, 2360, 2361, 2733 |
| SduI | GDGCHC | 3 cut(s) | 875, 925, 2274 |
| SfaNI | GCATC | 6 cut(s) | 142, 1009, 1456, 1915, 2194, 2343 |
| SfcI | CTRYAG | 3 cut(s) | 1620, 2218, 2606 |
| SfoI | GGCGCC | 1 cut(s) | 2230 |
| SfuI | TTCGAA | 1 cut(s) | 262 |
| SinI | GGWCC | 2 cut(s) | 469, 715 |
| SmaI | CCCGGG | 1 cut(s) | 2361 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1911 |
| SmlI | CTYRAG | 7 cut(s) | 29, 255, 741, 1696, 1900, 2263, 2623 |
| SmoI | CTYRAG | 7 cut(s) | 29, 255, 741, 1696, 1900, 2263, 2623 |
| SnaBI | TACGTA | 2 cut(s) | 914, 1607 |
| SphI | GCATGC | 1 cut(s) | 1556 |
| SsiI | CCGC | 7 cut(s) | 118, 361, 462, 1708, 2183, 2226, 2470 |
| SspDI | GGCGCC | 1 cut(s) | 2228 |
| SspI | AATATT | 3 cut(s) | 939, 1653, 2518 |
| SspMI | CTAG | 7 cut(s) | 465, 1110, 1863, 1979, 2214, 2663, 2752 |
| StyD4I | CCNGG | 4 cut(s) | 1815, 2358, 2359, 2731 |
| TaaI | ACNGT | 5 cut(s) | 46, 184, 843, 1049, 2297 |
| TaiI | ACGT | 8 cut(s) | 24, 193, 237, 322, 916, 1148, 1294, 1609 |
| TaqI | TCGA | 6 cut(s) | 64, 262, 529, 952, 1246, 2074 |
| TatI | WGTACW | 2 cut(s) | 1332, 1666 |
| TauI | GCSGC | 2 cut(s) | 2185, 2229 |
| TfiI | GAWTC | 7 cut(s) | 1177, 1228, 1342, 1568, 1625, 2198, 2336 |
| TscAI | CASTG | 1 cut(s) | 2583 |
| TseFI | GTSAC | 3 cut(s) | 169, 943, 1365 |
| TseI | GCWGC | 7 cut(s) | 386, 562, 1136, 1821, 1857, 2093, 2472 |
| Tsp45I | GTSAC | 3 cut(s) | 169, 943, 1365 |
| TspGWI | ACGGA | 2 cut(s) | 188, 2730 |
| TspMI | CCCGGG | 1 cut(s) | 2359 |
| TspRI | CASTG | 1 cut(s) | 2583 |
| VpaK11BI | GGWCC | 2 cut(s) | 469, 715 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 612, 2313 |
| XapI | RAATTY | 2 cut(s) | 1636, 1731 |
| XceI | RCATGY | 4 cut(s) | 296, 1497, 1556, 2479 |
| XmaI | CCCGGG | 1 cut(s) | 2359 |
| XmnI | GAANNNNTTC | 1 cut(s) | 132 |
| XspI | CTAG | 7 cut(s) | 465, 1110, 1863, 1979, 2214, 2663, 2752 |
| Zsp2I | ATGCAT | 1 cut(s) | 1024 |