Rorug02G0318800

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
38948995 .. 38951298
2304 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0318800.1

Sequence Viewer

Length: 2304 bp
ATGGCTGGAATACTAGTTGACGTTCTGTTAGAGCGTTTGGCTACGCTCGCCCTTGACAAGGTCGAACGCGAGCTGAAGCTGGTGAGAGGGGTTAAGCAAGAAATCAAAAATCTCACCAAGAAACTCAAAGCTATTCGAGCTGTACTGGAGGACGCAGAGCAGAGGCAAGTGATGGAAGCCAGCGTGAAAGATTGGCTGAATGAGCTAAATGATGTTTGTGACGACATGGATGACGTGCTGGATGAGTGGATCACTAGAGCTCTCATGCATCAATTGGAGAAACAAGAAAAACAAGGTGCAAATGCTCTTGCTACTACTAAGAAGAAGGTATGCTTTCCCTTTCCTTCCTCTTGCTTTCGCTTCGGCCAAGTCAATCAGCTATTTCGTCGTCACGAAATTGCTGCGAAGATAAAAGAGCTAAATGAAAGTTTAGATTTGATTGATCAAAACAAACAAAGTTTTGGCTTTCATCAAAACACCACTAGGGTCCCCGAACTACCTCAACGACAAAACACTACTTCTCTTCCCAATATTAAAACATTTGGTCGAGATAAGGAGAAAAACCTCATAGTTAGCAAGTTGATAAGTGAGAGTAGTCAAGAAAAGGAAGTTCCTCTTATCATCCCTATTGTAGGGATGAGGGGAATGGGGAAAACAACTCTTGCTCAACTTGTTTATAATGATGAAAATGTCAAATCTCATTTTGACAAGAGAATATGGGTCTGTGTCTCGGACCCTTTTGAAGAGATCAAGATTGCTCAAGCTATCATTGAAGAAATAGATAAAGATAATAGTTCAAAAAGCTCAAATGTGTTGCAAACCCTGACGCAATGTATAGATAAATTGATTGAGGGTAAAAAGTTTCTCCTAGTTTTAGATGATGTTTGGAGCCCAAACTCTGATCAATGGGAAGAATTGATCAAACCTTTACGTAATGGTGGTATAGGAAGTAGGATATTGGTGACCACTAGAAAGGAGGAGGTTGTTACTTTAATGAAAGCAACAACTCAATTGATCCATTTGAAGGAGTTGGGTGAAGCATTTTGTTTGTCATTGTTCTACTACAGTGCAGACATGGATGAGAGTAGTGTGTCCACCGAGTTTAAAAATATTGGATCAGAGATTGTGAAAAGGTGCAATGGGTTGCCTCTTGCTGCAAAGACATTAGGAAGCCTCATGCGTAATAAGAAAAAGATTCATGAATGGCAAGTTGTTTTAAAGAGTAAGACATGGGAATTGAAAGAGATTCAACAAGATGTTTTTCGACCACTACTATTAAGTTATCATGATTTGAGTCCAGCAACCAAACGTTGTCTTTTGTATTGTGTTACATTTCCAAAAGATTATGTGTACAATAGGAATTGTTTGATTGAGTTGTGGATGTCGCAAGATTATTTGAATGTCAAAGAAAGTAAAGAAAAGATAGTGGTTGGTCAAAATTATTTTGATGACTTAGTAATGCGGTCATATTTTCAAGATATTGAGGATGTTCAGTTTGAGTATGGAAACATAAAATGCAAAATTCATGATATTGTACATGACTTTCTACAATATTTGACAGAAAATGAATGTTTGATTTTGGATTTTGAGTTGGATTCTAGTAAGAGAAGAGATGTGTCAAAGGATAAAGTTCATCATTTGACCTTAGTGCATGCAACCGAGGGTGATTCTCTGCAAACTTTTCTCCCTAATTATAAAAAGGCTCACCTCCTGGAATTGAGCCTAGAGTTTTACTCGGTTGATGAAGGAAAGCATGGAGAAATTATGAATGGCTTAGAGCCGCATCCAGATTTGGAATCTTTATACATCTGGTTTTATAAAGGTGGCGCCTTCTCCCATTGGTTGTCGTATTTACACAGCTTGAGAATGCTCATCCTTGAGACTTGCACGGAATGTGGGGTTTTGCCTCCTTTAGGGAAATTGGCGTCCCTTGAATCATTGCATATTGTGCAACTCCATGGAGTCTCAAAGGTAGGAGTTGAGTTTTTGGGAATAGATGATGGGCAAACCTCCTCATCGTCTTCCATTTTCATATCATTCCCCAAGCTTAAACAACTTGGCTTCTACAACATGGGGCCATGGGAAGAGTGGGTAGGAGTGGAAAATAATAATATTACAATCATGCCATGCCTCTCTCAATTGACAATTGGGTACTGCTACAAGCTAAAAGCACTGCCGGACTTCCTGTGGGAGACACCACTACAGAAATTGCACATCTTTAGATCTCCAATTCTCCAAGACCTTTACAGACAAGGAATAGGTGAGAAGTGGGCCAAGATCCCAACCATCGTGATAGAAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

767

Amino Acids

88.18

Weight (kDa)

5.88

Isoelectric Point (pI)

46.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 96 1.4e-22 Rx N-terminal domain
NB-ARC PF00931 187 - 356 6.5e-35 NB-ARC domain
WHD_DRP PF23559 445 - 515 1e-18 Disease resistance protein Winged helix domain
LRR_R13L1-DRL21 PF25019 566 - 651 2.9e-19 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 678, 1695, 1818
AccB1I GGYRCC 1 cut(s) 1826
AccII CGCG 1 cut(s) 69
AciI CCGC 2 cut(s) 1462, 1781
AclI AACGTT 1 cut(s) 1309
AclWI GGATC 4 cut(s) 257, 1009, 1123, 2272
AcoI YGGCCR 1 cut(s) 364
AcsI RAATTY 1 cut(s) 1521
AcuI CTGAAG 1 cut(s) 95
AcyI GRCGYC 2 cut(s) 1827, 1925
AfaI GTAC 4 cut(s) 144, 1352, 1536, 2153
AfiI CCNNNNNNNGG 4 cut(s) 58, 632, 1024, 1913
AgsI TTSAA 9 cut(s) 743, 773, 798, 1024, 1240, 1250, 1399, 1475, 1934
AhlI ACTAGT 1 cut(s) 13
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 1 cut(s) 1710
Alw21I GWGCWC 1 cut(s) 262
Alw26I GTCTC 4 cut(s) 733, 1874, 1969, 2186
AlwI GGATC 4 cut(s) 257, 1009, 1123, 2272
AoxI GGCC 3 cut(s) 364, 2075, 2271
ApeKI GCWGC 2 cut(s) 401, 1154
ApoI RAATTY 1 cut(s) 1521
AspLEI GCGC 1 cut(s) 1829
AspS9I GGNCC 4 cut(s) 487, 733, 2075, 2271
AsuHPI GGTGA 7 cut(s) 94, 106, 973, 1046, 1676, 1697, 2273
AvaII GGWCC 2 cut(s) 487, 733
BanI GGYRCC 1 cut(s) 1826
BanII GRGCYC 2 cut(s) 262, 893
BbsI GAAGAC 1 cut(s) 2013
Bbv12I GWGCWC 1 cut(s) 262
BbvI GCAGC 2 cut(s) 388, 1141
BccI CCATC 3 cut(s) 166, 1994, 2294
BcgI CGANNNNNNTGC 2 cut(s) 383, 417
BciT130I CCWGG 1 cut(s) 1712
BclI TGATCA 3 cut(s) 442, 901, 918
BcoDI GTCTC 4 cut(s) 733, 1874, 1969, 2186
BcuI ACTAGT 1 cut(s) 13
BfaI CTAG 7 cut(s) 14, 255, 483, 869, 969, 1599, 1724
BfmI CTRYAG 2 cut(s) 1063, 2201
BfoI RGCGCY 1 cut(s) 1830
BglII AGATCT 1 cut(s) 2222
BisI GCNGC 3 cut(s) 402, 1155, 1781
BlsI GCNGC 3 cut(s) 403, 1156, 1782
Bme1390I CCNGG 1 cut(s) 1712
Bme18I GGWCC 2 cut(s) 487, 733
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 4 cut(s) 487, 733, 2075, 2271
BmiI GGNNCC 6 cut(s) 488, 489, 735, 890, 1828, 2076
BmrFI CCNGG 1 cut(s) 1712
BmsI GCATC 2 cut(s) 277, 1792
BpiI GAAGAC 1 cut(s) 2013
BplI GAGNNNNNCTC 2 cut(s) 1718, 1750
BpmI CTGGAG 1 cut(s) 167
BpuEI CTTGAG 3 cut(s) 744, 1882, 1898
BsaAI YACGTR 1 cut(s) 932
BsaHI GRCGYC 2 cut(s) 1827, 1925
BsaJI CCNNGG 3 cut(s) 1659, 1957, 2078
Bsc4I CCNNNNNNNGG 4 cut(s) 58, 632, 1024, 1913
Bse1I ACTGG 1 cut(s) 150
Bse3DI GCAATG 3 cut(s) 836, 1144, 1937
BseBI CCWGG 1 cut(s) 1712
BseDI CCNNGG 3 cut(s) 1659, 1957, 2078
BseGI GGATG 9 cut(s) 235, 247, 621, 642, 1084, 1386, 1492, 1783, 1872
BseLI CCNNNNNNNGG 4 cut(s) 58, 632, 1024, 1913
BseMI GCAATG 3 cut(s) 836, 1144, 1937
BseNI ACTGG 1 cut(s) 150
BseRI GAGGAG 2 cut(s) 992, 2002
BseXI GCAGC 2 cut(s) 388, 1141
BsgI GTGCAG 1 cut(s) 1089
Bsh1236I CGCG 1 cut(s) 69
BshFI GGCC 3 cut(s) 366, 2077, 2273
BshNI GGYRCC 1 cut(s) 1826
BsiHKAI GWGCWC 1 cut(s) 262
BsiSI CCGG 1 cut(s) 2177
BslFI GGGAC 2 cut(s) 473, 1912
BslI CCNNNNNNNGG 4 cut(s) 58, 632, 1024, 1913
BsmAI GTCTC 4 cut(s) 733, 1874, 1969, 2186
BsmFI GGGAC 2 cut(s) 473, 1912
BsmI GAATGC 1 cut(s) 1872
BsnI GGCC 3 cut(s) 366, 2077, 2273
Bsp1286I GDGCHC 2 cut(s) 262, 893
Bsp1407I TGTACA 2 cut(s) 1350, 1534
Bsp143I GATC 9 cut(s) 249, 442, 747, 901, 918, 1014, 1115, 2222, 2277
Bsp19I CCATGG 2 cut(s) 1957, 2078
BspACI CCGC 2 cut(s) 1462, 1781
BspANI GGCC 3 cut(s) 366, 2077, 2273
BspFNI CGCG 1 cut(s) 69
BspHI TCATGA 3 cut(s) 1198, 1285, 1525
BspLI GGNNCC 6 cut(s) 488, 489, 735, 890, 1828, 2076
BspPI GGATC 4 cut(s) 257, 1009, 1123, 2272
BspT107I GGYRCC 1 cut(s) 1826
BsrDI GCAATG 3 cut(s) 836, 1144, 1937
BsrGI TGTACA 2 cut(s) 1350, 1534
BsrI ACTGG 1 cut(s) 150
BssECI CCNNGG 3 cut(s) 1659, 1957, 2078
BssMI GATC 9 cut(s) 249, 442, 747, 901, 918, 1014, 1115, 2222, 2277
BssNI GRCGYC 2 cut(s) 1827, 1925
BssT1I CCWWGG 2 cut(s) 1957, 2078
Bst2UI CCWGG 1 cut(s) 1712
Bst4CI ACNGT 1 cut(s) 1067
Bst6I CTCTTC 4 cut(s) 528, 738, 1603, 2079
BstACI GRCGYC 2 cut(s) 1827, 1925
BstAPI GCANNNNNTGC 1 cut(s) 1948
BstAUI TGTACA 2 cut(s) 1350, 1534
BstBAI YACGTR 1 cut(s) 932
BstC8I GCNNGC 4 cut(s) 48, 71, 181, 1653
BstDEI CTNAG 4 cut(s) 318, 1453, 1645, 1774
BstDSI CCRYGG 2 cut(s) 1957, 2078
BstEII GGTNACC 1 cut(s) 961
BstENI CCTNNNNNAGG 3 cut(s) 56, 630, 1911
BstF5I GGATG 9 cut(s) 235, 247, 621, 642, 1084, 1386, 1492, 1783, 1872
BstFNI CGCG 1 cut(s) 69
BstH2I RGCGCY 1 cut(s) 1830
BstHHI GCGC 1 cut(s) 1829
BstKTI GATC 9 cut(s) 252, 445, 750, 904, 921, 1017, 1118, 2225, 2280
BstMAI GTCTC 4 cut(s) 733, 1874, 1969, 2186
BstMBI GATC 9 cut(s) 249, 442, 747, 901, 918, 1014, 1115, 2222, 2277
BstMWI GCNNNNNNNGC 4 cut(s) 47, 137, 202, 1948
BstNI CCWGG 1 cut(s) 1712
BstNSI RCATGY 1 cut(s) 1655
BstPI GGTNACC 1 cut(s) 961
BstSCI CCNGG 1 cut(s) 1710
BstSFI CTRYAG 2 cut(s) 1063, 2201
BstSNI TACGTA 1 cut(s) 932
BstUI CGCG 1 cut(s) 69
BstV1I GCAGC 2 cut(s) 388, 1141
BstV2I GAAGAC 1 cut(s) 2013
BstX2I RGATCY 2 cut(s) 2222, 2277
BstYI RGATCY 2 cut(s) 2222, 2277
BsuRI GGCC 3 cut(s) 366, 2077, 2273
BtgI CCRYGG 2 cut(s) 1957, 2078
BtrI CACGTC 1 cut(s) 235
BtsCI GGATG 9 cut(s) 235, 247, 621, 642, 1084, 1386, 1492, 1783, 1872
BtsI GCAGTG 1 cut(s) 2171
BtsIMutI CAGTG 2 cut(s) 1072, 2171
Cac8I GCNNGC 4 cut(s) 48, 71, 181, 1653
CciI TCATGA 3 cut(s) 1198, 1285, 1525
CfoI GCGC 1 cut(s) 1829
Cfr13I GGNCC 4 cut(s) 487, 733, 2075, 2271
CseI GACGC 3 cut(s) 161, 835, 1914
Csp6I GTAC 4 cut(s) 143, 1351, 1535, 2152
CviQI GTAC 4 cut(s) 143, 1351, 1535, 2152
DdeI CTNAG 4 cut(s) 318, 1453, 1645, 1774
DinI GGCGCC 1 cut(s) 1828
DpnI GATC 9 cut(s) 251, 444, 749, 903, 920, 1016, 1117, 2224, 2279
DpnII GATC 9 cut(s) 249, 442, 747, 901, 918, 1014, 1115, 2222, 2277
DraI TTTAAA 2 cut(s) 1105, 1218
EaeI YGGCCR 1 cut(s) 364
Eam1104I CTCTTC 4 cut(s) 528, 738, 1603, 2079
EarI CTCTTC 4 cut(s) 528, 738, 1603, 2079
Ecl136II GAGCTC 1 cut(s) 260
Eco105I TACGTA 1 cut(s) 932
Eco130I CCWWGG 2 cut(s) 1957, 2078
Eco24I GRGCYC 2 cut(s) 262, 893
Eco47I GGWCC 2 cut(s) 487, 733
Eco53kI GAGCTC 1 cut(s) 260
Eco57I CTGAAG 1 cut(s) 95
Eco91I GGTNACC 1 cut(s) 961
EcoICRI GAGCTC 1 cut(s) 260
EcoNI CCTNNNNNAGG 3 cut(s) 56, 630, 1911
EcoO109I RGGNCCY 1 cut(s) 487
EcoO65I GGTNACC 1 cut(s) 961
EcoRII CCWGG 1 cut(s) 1710
EcoT14I CCWWGG 2 cut(s) 1957, 2078
EcoT22I ATGCAT 1 cut(s) 270
EcoT38I GRGCYC 2 cut(s) 262, 893
EgeI GGCGCC 1 cut(s) 1828
EheI GGCGCC 1 cut(s) 1828
ErhI CCWWGG 2 cut(s) 1957, 2078
FalI AAGNNNNNCTT 4 cut(s) 317, 349, 600, 632
FaqI GGGAC 2 cut(s) 473, 1912
FbaI TGATCA 3 cut(s) 442, 901, 918
Fnu4HI GCNGC 3 cut(s) 402, 1155, 1781
FokI GGATG 9 cut(s) 242, 254, 608, 649, 1091, 1393, 1499, 1770, 1859
FriOI GRGCYC 2 cut(s) 262, 893
Fsp4HI GCNGC 3 cut(s) 402, 1155, 1781
FspBI CTAG 7 cut(s) 14, 255, 483, 869, 969, 1599, 1724
GlaI GCGC 1 cut(s) 1828
GluI GCNGC 3 cut(s) 402, 1155, 1781
GsuI CTGGAG 1 cut(s) 167
HaeII RGCGCY 1 cut(s) 1830
HaeIII GGCC 3 cut(s) 366, 2077, 2273
HapII CCGG 1 cut(s) 2177
HgaI GACGC 3 cut(s) 161, 835, 1914
HhaI GCGC 1 cut(s) 1829
Hin1I GRCGYC 2 cut(s) 1827, 1925
Hin6I GCGC 1 cut(s) 1827
HinP1I GCGC 1 cut(s) 1827
HincII GTYRAC 1 cut(s) 19
HindII GTYRAC 1 cut(s) 19
HindIII AAGCTT 1 cut(s) 2045
HinfI GANTC 8 cut(s) 1195, 1246, 1294, 1595, 1667, 1796, 1934, 1962
HpaII CCGG 1 cut(s) 2177
HphI GGTGA 7 cut(s) 94, 106, 973, 1046, 1676, 1697, 2273
Hpy166II GTNNAC 3 cut(s) 19, 1095, 1351
Hpy188I TCNGA 3 cut(s) 733, 901, 1120
Hpy8I GTNNAC 3 cut(s) 19, 1095, 1351
Hpy99I CGWCG 1 cut(s) 390
HpyAV CCTTC 5 cut(s) 319, 354, 1018, 1739, 1840
HpyCH4III ACNGT 1 cut(s) 1067
HpyCH4IV ACGT 4 cut(s) 21, 234, 931, 1309
HpyF10VI GCNNNNNNNGC 4 cut(s) 47, 137, 202, 1948
HpyF3I CTNAG 4 cut(s) 318, 1453, 1645, 1774
HpySE526I ACGT 4 cut(s) 21, 234, 931, 1309
Hsp92I GRCGYC 2 cut(s) 1827, 1925
HspAI GCGC 1 cut(s) 1827
KasI GGCGCC 1 cut(s) 1826
KflI GGGWCCC 1 cut(s) 487
Ksp22I TGATCA 3 cut(s) 442, 901, 918
Kzo9I GATC 9 cut(s) 249, 442, 747, 901, 918, 1014, 1115, 2222, 2277
LmnI GCTCC 1 cut(s) 888
Lsp1109I GCAGC 2 cut(s) 388, 1141
LweI GCATC 2 cut(s) 277, 1792
MaeI CTAG 7 cut(s) 14, 255, 483, 869, 969, 1599, 1724
MaeII ACGT 4 cut(s) 21, 234, 931, 1309
MaeIII GTNAC 5 cut(s) 218, 389, 961, 985, 1327
MalI GATC 9 cut(s) 251, 444, 749, 903, 920, 1016, 1117, 2224, 2279
MboI GATC 9 cut(s) 249, 442, 747, 901, 918, 1014, 1115, 2222, 2277
MboII GAAGA 9 cut(s) 334, 418, 515, 755, 785, 923, 1620, 2013, 2096
MfeI CAATTG 4 cut(s) 272, 1010, 2138, 2145
MflI RGATCY 2 cut(s) 2222, 2277
MhlI GDGCHC 2 cut(s) 262, 893
Mly113I GGCGCC 1 cut(s) 1827
MlyI GAGTC 2 cut(s) 1303, 1971
MmeI TCCRAC 1 cut(s) 1572
Mph1103I ATGCAT 1 cut(s) 270
MseI TTAA 7 cut(s) 93, 534, 992, 1104, 1217, 1277, 2049
MspI CCGG 1 cut(s) 2177
MspR9I CCNGG 1 cut(s) 1712
MunI CAATTG 4 cut(s) 272, 1010, 2138, 2145
Mva1269I GAATGC 1 cut(s) 1872
MvaI CCWGG 1 cut(s) 1712
MvnI CGCG 1 cut(s) 69
MwoI GCNNNNNNNGC 4 cut(s) 47, 137, 202, 1948
NarI GGCGCC 1 cut(s) 1827
NcoI CCATGG 2 cut(s) 1957, 2078
NdeII GATC 9 cut(s) 249, 442, 747, 901, 918, 1014, 1115, 2222, 2277
NlaIV GGNNCC 6 cut(s) 488, 489, 735, 890, 1828, 2076
NmuCI GTSAC 3 cut(s) 218, 389, 961
NsiI ATGCAT 1 cut(s) 270
NspI RCATGY 1 cut(s) 1655
PaeI GCATGC 1 cut(s) 1655
PagI TCATGA 3 cut(s) 1198, 1285, 1525
PctI GAATGC 1 cut(s) 1872
PfeI GAWTC 6 cut(s) 1195, 1246, 1595, 1667, 1796, 1934
PflFI GACNNNGTC 1 cut(s) 59
PfoI TCCNGGA 1 cut(s) 1710
PkrI GCNGC 3 cut(s) 403, 1156, 1782
PleI GAGTC 2 cut(s) 1302, 1970
PluTI GGCGCC 1 cut(s) 1830
PpsI GAGTC 2 cut(s) 1302, 1970
Ppu21I YACGTR 1 cut(s) 932
PpuMI RGGWCCY 1 cut(s) 487
PsiI TTATAA 3 cut(s) 678, 1695, 1818
Psp124BI GAGCTC 1 cut(s) 262
Psp1406I AACGTT 1 cut(s) 1309
Psp5II RGGWCCY 1 cut(s) 487
Psp6I CCWGG 1 cut(s) 1710
PspEI GGTNACC 1 cut(s) 961
PspGI CCWGG 1 cut(s) 1710
PspN4I GGNNCC 6 cut(s) 488, 489, 735, 890, 1828, 2076
PspPI GGNCC 4 cut(s) 487, 733, 2075, 2271
PspPPI RGGWCCY 1 cut(s) 487
PsuI RGATCY 2 cut(s) 2222, 2277
PsyI GACNNNGTC 1 cut(s) 59
RsaI GTAC 4 cut(s) 144, 1352, 1536, 2153
RsaNI GTAC 4 cut(s) 143, 1351, 1535, 2152
SacI GAGCTC 1 cut(s) 262
SaqAI TTAA 7 cut(s) 93, 534, 992, 1104, 1217, 1277, 2049
SatI GCNGC 3 cut(s) 402, 1155, 1781
Sau3AI GATC 9 cut(s) 249, 442, 747, 901, 918, 1014, 1115, 2222, 2277
Sau96I GGNCC 4 cut(s) 487, 733, 2075, 2271
SchI GAGTC 2 cut(s) 1303, 1971
ScrFI CCNGG 1 cut(s) 1712
SduI GDGCHC 2 cut(s) 262, 893
SfaNI GCATC 2 cut(s) 277, 1792
SfcI CTRYAG 2 cut(s) 1063, 2201
SfoI GGCGCC 1 cut(s) 1828
SinI GGWCC 2 cut(s) 487, 733
SmlI CTYRAG 3 cut(s) 759, 1861, 1877
SmoI CTYRAG 3 cut(s) 759, 1861, 1877
SnaBI TACGTA 1 cut(s) 932
SpeI ACTAGT 1 cut(s) 13
SphI GCATGC 1 cut(s) 1655
SsiI CCGC 2 cut(s) 1462, 1781
SspDI GGCGCC 1 cut(s) 1826
SspI AATATT 4 cut(s) 532, 1111, 1553, 2113
SspMI CTAG 7 cut(s) 14, 255, 483, 869, 969, 1599, 1724
SstI GAGCTC 1 cut(s) 262
StyD4I CCNGG 1 cut(s) 1710
StyI CCWWGG 2 cut(s) 1957, 2078
TaaI ACNGT 1 cut(s) 1067
TaiI ACGT 4 cut(s) 24, 237, 934, 1312
TaqI TCGA 4 cut(s) 63, 136, 547, 1264
TatI WGTACW 3 cut(s) 142, 1350, 1534
TauI GCSGC 1 cut(s) 1783
TfiI GAWTC 6 cut(s) 1195, 1246, 1595, 1667, 1796, 1934
Tru1I TTAA 7 cut(s) 93, 534, 992, 1104, 1217, 1277, 2049
Tru9I TTAA 7 cut(s) 93, 534, 992, 1104, 1217, 1277, 2049
TscAI CASTG 2 cut(s) 1072, 2178
TseFI GTSAC 3 cut(s) 218, 389, 961
TseI GCWGC 2 cut(s) 401, 1154
Tsp45I GTSAC 3 cut(s) 218, 389, 961
TspGWI ACGGA 1 cut(s) 1904
TspRI CASTG 2 cut(s) 1072, 2178
Tth111I GACNNNGTC 1 cut(s) 59
VpaK11BI GGWCC 2 cut(s) 487, 733
XagI CCTNNNNNAGG 3 cut(s) 56, 630, 1911
XapI RAATTY 1 cut(s) 1521
XceI RCATGY 1 cut(s) 1655
XcmI CCANNNNNNNNNTGG 1 cut(s) 2085
XspI CTAG 7 cut(s) 14, 255, 483, 869, 969, 1599, 1724
Zsp2I ATGCAT 1 cut(s) 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.