disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 35 - 125 | 3.5e-18 | Rx N-terminal domain |
| NB-ARC | PF00931 | 227 - 393 | 5.8e-36 | NB-ARC domain |
| WHD_DRP | PF23559 | 479 - 550 | 4.5e-24 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 602 - 926 | 3.7e-28 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 609 - 658 | 1e-07 | Leucine rich repeat |
| LRR_8 | PF13855 | 627 - 681 | 1.5e-07 | Leucine rich repeat |
| LRR_R13L1-DRL21 | PF25019 | 735 - 865 | 6.4e-26 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2177 |
| AccI | GTMKAC | 1 cut(s) | 2149 |
| AccIII | TCCGGA | 1 cut(s) | 1918 |
| AciI | CCGC | 5 cut(s) | 1807, 1932, 2291, 2520, 2828 |
| AclWI | GGATC | 2 cut(s) | 2255, 2712 |
| AcoI | YGGCCR | 2 cut(s) | 448, 472 |
| AcsI | RAATTY | 7 cut(s) | 342, 565, 1200, 1888, 2413, 2839, 2852 |
| AcuI | CTGAAG | 6 cut(s) | 114, 723, 2127, 2216, 2813, 2819 |
| AcyI | GRCGYC | 1 cut(s) | 2825 |
| AdeI | CACNNNGTG | 1 cut(s) | 2463 |
| AfaI | GTAC | 5 cut(s) | 5, 150, 581, 595, 2624 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 734, 1971, 2514 |
| AflIII | ACRYGT | 2 cut(s) | 297, 1801 |
| AjiI | CACGTC | 2 cut(s) | 298, 319 |
| AjnI | CCWGG | 1 cut(s) | 2382 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1587, 1619 |
| Alw21I | GWGCWC | 6 cut(s) | 234, 852, 939, 1102, 1644, 1944 |
| Alw26I | GTCTC | 8 cut(s) | 553, 835, 1280, 1421, 1847, 2211, 2329, 2569 |
| Alw44I | GTGCAC | 3 cut(s) | 935, 1640, 1940 |
| AlwI | GGATC | 2 cut(s) | 2255, 2712 |
| Ama87I | CYCGRG | 1 cut(s) | 2063 |
| Aor13HI | TCCGGA | 1 cut(s) | 1918 |
| AoxI | GGCC | 5 cut(s) | 448, 472, 877, 2047, 2067 |
| ApaLI | GTGCAC | 3 cut(s) | 935, 1640, 1940 |
| ApeKI | GCWGC | 5 cut(s) | 2092, 2279, 2454, 2781, 2830 |
| ApoI | RAATTY | 7 cut(s) | 342, 565, 1200, 1888, 2413, 2839, 2852 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 631, 663, 1873, 1905 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1914 |
| AspS9I | GGNCC | 4 cut(s) | 1769, 1809, 2475, 2565 |
| AsuC2I | CCSGG | 1 cut(s) | 1764 |
| AsuHPI | GGTGA | 6 cut(s) | 127, 193, 1229, 2198, 2320, 2727 |
| AsuII | TTCGAA | 1 cut(s) | 905 |
| AsuNHI | GCTAGC | 1 cut(s) | 2158 |
| AvaI | CYCGRG | 1 cut(s) | 2063 |
| AvaII | GGWCC | 4 cut(s) | 1769, 1809, 2475, 2565 |
| BaeGI | GKGCMC | 4 cut(s) | 939, 1644, 1944, 2468 |
| BalI | TGGCCA | 2 cut(s) | 450, 474 |
| BanII | GRGCYC | 1 cut(s) | 852 |
| BauI | CACGAG | 1 cut(s) | 968 |
| BbsI | GAAGAC | 2 cut(s) | 2801, 2828 |
| Bbv12I | GWGCWC | 6 cut(s) | 234, 852, 939, 1102, 1644, 1944 |
| BbvI | GCAGC | 5 cut(s) | 2104, 2266, 2466, 2768, 2817 |
| BccI | CCATC | 7 cut(s) | 82, 304, 733, 875, 878, 1087, 2780 |
| BceAI | ACGGC | 1 cut(s) | 212 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2341, 2375 |
| BciT130I | CCWGG | 1 cut(s) | 2384 |
| BclI | TGATCA | 4 cut(s) | 76, 1404, 2632, 2844 |
| BcnI | CCSGG | 1 cut(s) | 1764 |
| BcoDI | GTCTC | 8 cut(s) | 553, 835, 1280, 1421, 1847, 2211, 2329, 2569 |
| BfaI | CTAG | 7 cut(s) | 116, 281, 773, 914, 1086, 1161, 2159 |
| BfmI | CTRYAG | 2 cut(s) | 219, 1041 |
| BisI | GCNGC | 6 cut(s) | 2093, 2280, 2455, 2782, 2828, 2831 |
| BlsI | GCNGC | 6 cut(s) | 2094, 2281, 2456, 2783, 2829, 2832 |
| BmcAI | AGTACT | 1 cut(s) | 2624 |
| Bme1390I | CCNGG | 2 cut(s) | 1764, 2384 |
| Bme18I | GGWCC | 4 cut(s) | 1769, 1809, 2475, 2565 |
| BmeT110I | CYCGRG | 1 cut(s) | 2063 |
| BmgBI | CACGTC | 2 cut(s) | 298, 319 |
| BmgT120I | GGNCC | 4 cut(s) | 1769, 1809, 2475, 2565 |
| BmiI | GGNNCC | 3 cut(s) | 1209, 2566, 2567 |
| BmrFI | CCNGG | 2 cut(s) | 1764, 2384 |
| BmsI | GCATC | 7 cut(s) | 229, 1008, 2104, 2278, 2388, 2673, 2710 |
| BmtI | GCTAGC | 1 cut(s) | 2162 |
| BpiI | GAAGAC | 2 cut(s) | 2801, 2828 |
| Bpu14I | TTCGAA | 1 cut(s) | 905 |
| BpuEI | CTTGAG | 3 cut(s) | 1966, 2591, 2654 |
| BpuMI | CCSGG | 1 cut(s) | 1764 |
| Bsa29I | ATCGAT | 1 cut(s) | 48 |
| BsaHI | GRCGYC | 1 cut(s) | 2825 |
| BsaI | GGTCTC | 1 cut(s) | 1280 |
| BsaJI | CCNNGG | 3 cut(s) | 2064, 2070, 2816 |
| BsaWI | WCCGGW | 1 cut(s) | 1918 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 734, 1971, 2514 |
| Bse1I | ACTGG | 1 cut(s) | 2310 |
| Bse3DI | GCAATG | 1 cut(s) | 504 |
| BseAI | TCCGGA | 1 cut(s) | 1918 |
| BseBI | CCWGG | 1 cut(s) | 2384 |
| BseCI | ATCGAT | 1 cut(s) | 48 |
| BseDI | CCNNGG | 3 cut(s) | 2064, 2070, 2816 |
| BseGI | GGATG | 6 cut(s) | 331, 723, 744, 1095, 1488, 2379 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 734, 1971, 2514 |
| BseMI | GCAATG | 1 cut(s) | 504 |
| BseMII | CTCAG | 3 cut(s) | 846, 1858, 2593 |
| BseNI | ACTGG | 1 cut(s) | 2310 |
| BseRI | GAGGAG | 4 cut(s) | 272, 956, 1718, 2470 |
| BseSI | GKGCMC | 4 cut(s) | 939, 1644, 1944, 2468 |
| BseXI | GCAGC | 5 cut(s) | 2104, 2266, 2466, 2768, 2817 |
| BsgI | GTGCAG | 1 cut(s) | 2335 |
| BshFI | GGCC | 5 cut(s) | 450, 474, 879, 2049, 2069 |
| BshVI | ATCGAT | 1 cut(s) | 48 |
| BsiHKAI | GWGCWC | 6 cut(s) | 234, 852, 939, 1102, 1644, 1944 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2063 |
| BsiSI | CCGG | 3 cut(s) | 1764, 1919, 2687 |
| BslFI | GGGAC | 1 cut(s) | 2551 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 734, 1971, 2514 |
| BsmAI | GTCTC | 8 cut(s) | 553, 835, 1280, 1421, 1847, 2211, 2329, 2569 |
| BsmFI | GGGAC | 1 cut(s) | 2551 |
| BsmI | GAATGC | 2 cut(s) | 423, 2404 |
| BsnI | GGCC | 5 cut(s) | 450, 474, 879, 2049, 2069 |
| Bso31I | GGTCTC | 1 cut(s) | 1280 |
| BsoBI | CYCGRG | 1 cut(s) | 2063 |
| Bsp119I | TTCGAA | 1 cut(s) | 905 |
| Bsp1286I | GDGCHC | 7 cut(s) | 234, 852, 939, 1102, 1644, 1944, 2468 |
| Bsp13I | TCCGGA | 1 cut(s) | 1918 |
| Bsp1407I | TGTACA | 1 cut(s) | 3 |
| Bsp143I | GATC | 9 cut(s) | 45, 49, 76, 910, 1404, 2247, 2632, 2704, 2844 |
| Bsp19I | CCATGG | 1 cut(s) | 2070 |
| BspACI | CCGC | 5 cut(s) | 1807, 1932, 2291, 2520, 2828 |
| BspANI | GGCC | 5 cut(s) | 450, 474, 879, 2049, 2069 |
| BspCNI | CTCAG | 3 cut(s) | 845, 1857, 2592 |
| BspDI | ATCGAT | 1 cut(s) | 48 |
| BspEI | TCCGGA | 1 cut(s) | 1918 |
| BspHI | TCATGA | 1 cut(s) | 2707 |
| BspLI | GGNNCC | 3 cut(s) | 1209, 2566, 2567 |
| BspOI | GCTAGC | 1 cut(s) | 2162 |
| BspPI | GGATC | 2 cut(s) | 2255, 2712 |
| BspT104I | TTCGAA | 1 cut(s) | 905 |
| BspTNI | GGTCTC | 1 cut(s) | 1280 |
| BsrDI | GCAATG | 1 cut(s) | 504 |
| BsrGI | TGTACA | 1 cut(s) | 3 |
| BsrI | ACTGG | 1 cut(s) | 2310 |
| BssECI | CCNNGG | 3 cut(s) | 2064, 2070, 2816 |
| BssMI | GATC | 9 cut(s) | 45, 49, 76, 910, 1404, 2247, 2632, 2704, 2844 |
| BssNI | GRCGYC | 1 cut(s) | 2825 |
| BssSI | CACGAG | 1 cut(s) | 968 |
| BssT1I | CCWWGG | 2 cut(s) | 2070, 2816 |
| Bst2BI | CACGAG | 1 cut(s) | 968 |
| Bst2UI | CCWGG | 1 cut(s) | 2384 |
| Bst4CI | ACNGT | 6 cut(s) | 123, 1032, 1348, 1371, 2450, 2878 |
| Bst6I | CTCTTC | 3 cut(s) | 240, 929, 2103 |
| BstACI | GRCGYC | 1 cut(s) | 2825 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 386, 548, 2026, 2463 |
| BstAUI | TGTACA | 1 cut(s) | 3 |
| BstBI | TTCGAA | 1 cut(s) | 905 |
| BstC8I | GCNNGC | 2 cut(s) | 2090, 2160 |
| BstDEI | CTNAG | 7 cut(s) | 402, 832, 1379, 1499, 1844, 2431, 2579 |
| BstDSI | CCRYGG | 1 cut(s) | 2070 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 732 |
| BstF5I | GGATG | 6 cut(s) | 331, 723, 744, 1095, 1488, 2379 |
| BstKTI | GATC | 9 cut(s) | 48, 52, 79, 913, 1407, 2250, 2635, 2707, 2847 |
| BstMAI | GTCTC | 8 cut(s) | 553, 835, 1280, 1421, 1847, 2211, 2329, 2569 |
| BstMBI | GATC | 9 cut(s) | 45, 49, 76, 910, 1404, 2247, 2632, 2704, 2844 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 224, 386, 548, 1166, 2026, 2288, 2297, 2463 |
| BstNI | CCWGG | 1 cut(s) | 2384 |
| BstNSI | RCATGY | 1 cut(s) | 2596 |
| BstSCI | CCNGG | 2 cut(s) | 1762, 2382 |
| BstSFI | CTRYAG | 2 cut(s) | 219, 1041 |
| BstSLI | GKGCMC | 4 cut(s) | 939, 1644, 1944, 2468 |
| BstV1I | GCAGC | 5 cut(s) | 2104, 2266, 2466, 2768, 2817 |
| BstV2I | GAAGAC | 2 cut(s) | 2801, 2828 |
| BstX2I | RGATCY | 1 cut(s) | 2247 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 310 |
| BstYI | RGATCY | 1 cut(s) | 2247 |
| Bsu15I | ATCGAT | 1 cut(s) | 48 |
| BsuRI | GGCC | 5 cut(s) | 450, 474, 879, 2049, 2069 |
| BsuTUI | ATCGAT | 1 cut(s) | 48 |
| BtgI | CCRYGG | 1 cut(s) | 2070 |
| BtrI | CACGTC | 2 cut(s) | 298, 319 |
| BtsCI | GGATG | 6 cut(s) | 331, 723, 744, 1095, 1488, 2379 |
| BtsI | GCAGTG | 2 cut(s) | 1792, 2798 |
| BtsIMutI | CAGTG | 5 cut(s) | 336, 1353, 1792, 2455, 2798 |
| Cac8I | GCNNGC | 2 cut(s) | 2090, 2160 |
| CciI | TCATGA | 1 cut(s) | 2707 |
| Cfr13I | GGNCC | 4 cut(s) | 1769, 1809, 2475, 2565 |
| ClaI | ATCGAT | 1 cut(s) | 48 |
| CseI | GACGC | 2 cut(s) | 2164, 2833 |
| Csp6I | GTAC | 5 cut(s) | 4, 149, 580, 594, 2623 |
| CviAII | CATG | 9 cut(s) | 1279, 1448, 1631, 2071, 2102, 2221, 2593, 2708, 2749 |
| CviQI | GTAC | 5 cut(s) | 4, 149, 580, 594, 2623 |
| DdeI | CTNAG | 7 cut(s) | 402, 832, 1379, 1499, 1844, 2431, 2579 |
| DpnI | GATC | 9 cut(s) | 47, 51, 78, 912, 1406, 2249, 2634, 2706, 2846 |
| DpnII | GATC | 9 cut(s) | 45, 49, 76, 910, 1404, 2247, 2632, 2704, 2844 |
| DraI | TTTAAA | 1 cut(s) | 442 |
| DraIII | CACNNNGTG | 1 cut(s) | 2463 |
| EaeI | YGGCCR | 2 cut(s) | 448, 472 |
| Eam1104I | CTCTTC | 3 cut(s) | 240, 929, 2103 |
| EarI | CTCTTC | 3 cut(s) | 240, 929, 2103 |
| Ecl136II | GAGCTC | 1 cut(s) | 850 |
| Eco130I | CCWWGG | 2 cut(s) | 2070, 2816 |
| Eco24I | GRGCYC | 1 cut(s) | 852 |
| Eco31I | GGTCTC | 1 cut(s) | 1280 |
| Eco32I | GATATC | 1 cut(s) | 2359 |
| Eco47I | GGWCC | 4 cut(s) | 1769, 1809, 2475, 2565 |
| Eco53kI | GAGCTC | 1 cut(s) | 850 |
| Eco57I | CTGAAG | 6 cut(s) | 114, 723, 2127, 2216, 2813, 2819 |
| Eco88I | CYCGRG | 1 cut(s) | 2063 |
| EcoICRI | GAGCTC | 1 cut(s) | 850 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 732 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1769, 2565 |
| EcoRII | CCWGG | 1 cut(s) | 2382 |
| EcoRV | GATATC | 1 cut(s) | 2359 |
| EcoT14I | CCWWGG | 2 cut(s) | 2070, 2816 |
| EcoT22I | ATGCAT | 2 cut(s) | 425, 1632 |
| EcoT38I | GRGCYC | 1 cut(s) | 852 |
| ErhI | CCWWGG | 2 cut(s) | 2070, 2816 |
| FaeI | CATG | 9 cut(s) | 1282, 1451, 1634, 2074, 2105, 2224, 2596, 2711, 2752 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1482, 1514 |
| FaqI | GGGAC | 1 cut(s) | 2551 |
| FatI | CATG | 9 cut(s) | 1278, 1447, 1630, 2070, 2101, 2220, 2592, 2707, 2748 |
| FauI | CCCGC | 1 cut(s) | 1925 |
| FbaI | TGATCA | 4 cut(s) | 76, 1404, 2632, 2844 |
| FblI | GTMKAC | 1 cut(s) | 2149 |
| Fnu4HI | GCNGC | 6 cut(s) | 2093, 2280, 2455, 2782, 2828, 2831 |
| FokI | GGATG | 6 cut(s) | 338, 710, 751, 1102, 1495, 2366 |
| FriOI | GRGCYC | 1 cut(s) | 852 |
| Fsp4HI | GCNGC | 6 cut(s) | 2093, 2280, 2455, 2782, 2828, 2831 |
| FspBI | CTAG | 7 cut(s) | 116, 281, 773, 914, 1086, 1161, 2159 |
| GluI | GCNGC | 6 cut(s) | 2093, 2280, 2455, 2782, 2828, 2831 |
| HaeIII | GGCC | 5 cut(s) | 450, 474, 879, 2049, 2069 |
| HapII | CCGG | 3 cut(s) | 1764, 1919, 2687 |
| HgaI | GACGC | 2 cut(s) | 2164, 2833 |
| Hin1I | GRCGYC | 1 cut(s) | 2825 |
| Hin1II | CATG | 9 cut(s) | 1282, 1451, 1634, 2074, 2105, 2224, 2596, 2711, 2752 |
| HincII | GTYRAC | 2 cut(s) | 895, 2082 |
| HindII | GTYRAC | 2 cut(s) | 895, 2082 |
| HindIII | AAGCTT | 2 cut(s) | 1733, 2240 |
| HinfI | GANTC | 7 cut(s) | 747, 1544, 1840, 1894, 2426, 2437, 2577 |
| HpaII | CCGG | 3 cut(s) | 1764, 1919, 2687 |
| HphI | GGTGA | 6 cut(s) | 127, 193, 1229, 2198, 2320, 2727 |
| Hpy166II | GTNNAC | 8 cut(s) | 582, 895, 937, 1642, 1942, 2082, 2150, 2311 |
| Hpy188I | TCNGA | 5 cut(s) | 87, 835, 2582, 2661, 2838 |
| Hpy188III | TCNNGA | 6 cut(s) | 392, 701, 914, 1919, 2423, 2708 |
| Hpy8I | GTNNAC | 8 cut(s) | 582, 895, 937, 1642, 1942, 2082, 2150, 2311 |
| HpyCH4III | ACNGT | 6 cut(s) | 123, 1032, 1348, 1371, 2450, 2878 |
| HpyCH4IV | ACGT | 4 cut(s) | 297, 318, 1801, 1883 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 224, 386, 548, 1166, 2026, 2288, 2297, 2463 |
| HpyF3I | CTNAG | 7 cut(s) | 402, 832, 1379, 1499, 1844, 2431, 2579 |
| HpySE526I | ACGT | 4 cut(s) | 297, 318, 1801, 1883 |
| Hsp92I | GRCGYC | 1 cut(s) | 2825 |
| Hsp92II | CATG | 9 cut(s) | 1282, 1451, 1634, 2074, 2105, 2224, 2596, 2711, 2752 |
| KflI | GGGWCCC | 1 cut(s) | 2565 |
| Kpn2I | TCCGGA | 1 cut(s) | 1918 |
| Ksp22I | TGATCA | 4 cut(s) | 76, 1404, 2632, 2844 |
| Kzo9I | GATC | 9 cut(s) | 45, 49, 76, 910, 1404, 2247, 2632, 2704, 2844 |
| LmnI | GCTCC | 2 cut(s) | 1097, 1351 |
| Lsp1109I | GCAGC | 5 cut(s) | 2104, 2266, 2466, 2768, 2817 |
| LweI | GCATC | 7 cut(s) | 229, 1008, 2104, 2278, 2388, 2673, 2710 |
| MaeI | CTAG | 7 cut(s) | 116, 281, 773, 914, 1086, 1161, 2159 |
| MaeII | ACGT | 4 cut(s) | 297, 318, 1801, 1883 |
| MaeIII | GTNAC | 7 cut(s) | 16, 1060, 1133, 1429, 1895, 2058, 2733 |
| MalI | GATC | 9 cut(s) | 47, 51, 78, 912, 1406, 2249, 2634, 2706, 2846 |
| MboI | GATC | 9 cut(s) | 45, 49, 76, 910, 1404, 2247, 2632, 2704, 2844 |
| MfeI | CAATTG | 3 cut(s) | 546, 2130, 2470 |
| MflI | RGATCY | 1 cut(s) | 2247 |
| MhlI | GDGCHC | 7 cut(s) | 234, 852, 939, 1102, 1644, 1944, 2468 |
| MlsI | TGGCCA | 2 cut(s) | 450, 474 |
| MluNI | TGGCCA | 2 cut(s) | 450, 474 |
| MlyI | GAGTC | 3 cut(s) | 1849, 1903, 2571 |
| MmeI | TCCRAC | 3 cut(s) | 327, 1585, 2593 |
| Mox20I | TGGCCA | 2 cut(s) | 450, 474 |
| Mph1103I | ATGCAT | 2 cut(s) | 425, 1632 |
| MroI | TCCGGA | 1 cut(s) | 1918 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1914 |
| MscI | TGGCCA | 2 cut(s) | 450, 474 |
| MslI | CAYNNNNRTG | 1 cut(s) | 2100 |
| Msp20I | TGGCCA | 2 cut(s) | 450, 474 |
| MspA1I | CMGCKG | 1 cut(s) | 2830 |
| MspI | CCGG | 3 cut(s) | 1764, 1919, 2687 |
| MspR9I | CCNGG | 2 cut(s) | 1764, 2384 |
| MunI | CAATTG | 3 cut(s) | 546, 2130, 2470 |
| Mva1269I | GAATGC | 2 cut(s) | 423, 2404 |
| MvaI | CCWGG | 1 cut(s) | 2384 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 224, 386, 548, 1166, 2026, 2288, 2297, 2463 |
| NciI | CCSGG | 1 cut(s) | 1764 |
| NcoI | CCATGG | 1 cut(s) | 2070 |
| NdeII | GATC | 9 cut(s) | 45, 49, 76, 910, 1404, 2247, 2632, 2704, 2844 |
| NheI | GCTAGC | 1 cut(s) | 2158 |
| NlaIII | CATG | 9 cut(s) | 1282, 1451, 1634, 2074, 2105, 2224, 2596, 2711, 2752 |
| NlaIV | GGNNCC | 3 cut(s) | 1209, 2566, 2567 |
| NmeAIII | GCCGAG | 1 cut(s) | 1874 |
| NmuCI | GTSAC | 5 cut(s) | 16, 1060, 1133, 1895, 2733 |
| NsiI | ATGCAT | 2 cut(s) | 425, 1632 |
| NspI | RCATGY | 1 cut(s) | 2596 |
| NspV | TTCGAA | 1 cut(s) | 905 |
| PacI | TTAATTAA | 1 cut(s) | 2490 |
| PagI | TCATGA | 1 cut(s) | 2707 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 303 |
| PctI | GAATGC | 2 cut(s) | 423, 2404 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1914 |
| PfeI | GAWTC | 4 cut(s) | 747, 1544, 2426, 2437 |
| PfoI | TCCNGGA | 1 cut(s) | 2382 |
| PkrI | GCNGC | 6 cut(s) | 2094, 2281, 2456, 2783, 2829, 2832 |
| PleI | GAGTC | 3 cut(s) | 1848, 1902, 2571 |
| PpsI | GAGTC | 3 cut(s) | 1848, 1902, 2571 |
| PpuMI | RGGWCCY | 2 cut(s) | 1769, 2565 |
| PsiI | TTATAA | 1 cut(s) | 2177 |
| Psp124BI | GAGCTC | 1 cut(s) | 852 |
| Psp5II | RGGWCCY | 2 cut(s) | 1769, 2565 |
| Psp6I | CCWGG | 1 cut(s) | 2382 |
| PspGI | CCWGG | 1 cut(s) | 2382 |
| PspN4I | GGNNCC | 3 cut(s) | 1209, 2566, 2567 |
| PspPI | GGNCC | 4 cut(s) | 1769, 1809, 2475, 2565 |
| PspPPI | RGGWCCY | 2 cut(s) | 1769, 2565 |
| PsuI | RGATCY | 1 cut(s) | 2247 |
| RsaI | GTAC | 5 cut(s) | 5, 150, 581, 595, 2624 |
| RsaNI | GTAC | 5 cut(s) | 4, 149, 580, 594, 2623 |
| RseI | CAYNNNNRTG | 1 cut(s) | 2100 |
| SacI | GAGCTC | 1 cut(s) | 852 |
| SatI | GCNGC | 6 cut(s) | 2093, 2280, 2455, 2782, 2828, 2831 |
| Sau3AI | GATC | 9 cut(s) | 45, 49, 76, 910, 1404, 2247, 2632, 2704, 2844 |
| Sau96I | GGNCC | 4 cut(s) | 1769, 1809, 2475, 2565 |
| ScaI | AGTACT | 1 cut(s) | 2624 |
| SchI | GAGTC | 3 cut(s) | 1849, 1903, 2571 |
| ScrFI | CCNGG | 2 cut(s) | 1764, 2384 |
| SduI | GDGCHC | 7 cut(s) | 234, 852, 939, 1102, 1644, 1944, 2468 |
| SfaNI | GCATC | 7 cut(s) | 229, 1008, 2104, 2278, 2388, 2673, 2710 |
| SfcI | CTRYAG | 2 cut(s) | 219, 1041 |
| SfuI | TTCGAA | 1 cut(s) | 905 |
| SinI | GGWCC | 4 cut(s) | 1769, 1809, 2475, 2565 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 2100 |
| SmlI | CTYRAG | 3 cut(s) | 1945, 2570, 2669 |
| SmoI | CTYRAG | 3 cut(s) | 1945, 2570, 2669 |
| SsiI | CCGC | 5 cut(s) | 1807, 1932, 2291, 2520, 2828 |
| SspI | AATATT | 2 cut(s) | 1612, 1658 |
| SspMI | CTAG | 7 cut(s) | 116, 281, 773, 914, 1086, 1161, 2159 |
| SstI | GAGCTC | 1 cut(s) | 852 |
| StyD4I | CCNGG | 2 cut(s) | 1762, 2382 |
| StyI | CCWWGG | 2 cut(s) | 2070, 2816 |
| TaaI | ACNGT | 6 cut(s) | 123, 1032, 1348, 1371, 2450, 2878 |
| TaiI | ACGT | 4 cut(s) | 300, 321, 1804, 1886 |
| TatI | WGTACW | 3 cut(s) | 3, 579, 2622 |
| TauI | GCSGC | 1 cut(s) | 2830 |
| TfiI | GAWTC | 4 cut(s) | 747, 1544, 2426, 2437 |
| TscAI | CASTG | 5 cut(s) | 343, 1353, 1799, 2455, 2805 |
| TseFI | GTSAC | 5 cut(s) | 16, 1060, 1133, 1895, 2733 |
| TseI | GCWGC | 5 cut(s) | 2092, 2279, 2454, 2781, 2830 |
| Tsp45I | GTSAC | 5 cut(s) | 16, 1060, 1133, 1895, 2733 |
| TspDTI | ATGAA | 8 cut(s) | 672, 1614, 1686, 1997, 2090, 2318, 2718, 2737 |
| TspGWI | ACGGA | 3 cut(s) | 97, 256, 2167 |
| TspRI | CASTG | 5 cut(s) | 343, 1353, 1799, 2455, 2805 |
| VneI | GTGCAC | 3 cut(s) | 935, 1640, 1940 |
| VpaK11BI | GGWCC | 4 cut(s) | 1769, 1809, 2475, 2565 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 732 |
| XapI | RAATTY | 7 cut(s) | 342, 565, 1200, 1888, 2413, 2839, 2852 |
| XbaI | TCTAGA | 1 cut(s) | 913 |
| XceI | RCATGY | 1 cut(s) | 2596 |
| XmiI | GTMKAC | 1 cut(s) | 2149 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1914 |
| XspI | CTAG | 7 cut(s) | 116, 281, 773, 914, 1086, 1161, 2159 |
| ZrmI | AGTACT | 1 cut(s) | 2624 |
| Zsp2I | ATGCAT | 2 cut(s) | 425, 1632 |