Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 613 |
| AciI | CCGC | 3 cut(s) | 372, 404, 613 |
| AclWI | GGATC | 1 cut(s) | 642 |
| AcsI | RAATTY | 1 cut(s) | 23 |
| AcuI | CTGAAG | 1 cut(s) | 414 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 204, 588, 612 |
| AflIII | ACRYGT | 1 cut(s) | 446 |
| AgsI | TTSAA | 4 cut(s) | 252, 259, 265, 343 |
| AjiI | CACGTC | 1 cut(s) | 447 |
| AluBI | AGCT | 6 cut(s) | 120, 212, 231, 278, 347, 532 |
| AluI | AGCT | 6 cut(s) | 120, 212, 231, 278, 347, 532 |
| Alw21I | GWGCWC | 1 cut(s) | 517 |
| Alw26I | GTCTC | 1 cut(s) | 380 |
| AlwI | GGATC | 1 cut(s) | 642 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 72 |
| AoxI | GGCC | 1 cut(s) | 590 |
| ApeKI | GCWGC | 3 cut(s) | 171, 212, 347 |
| ApoI | RAATTY | 1 cut(s) | 23 |
| AspS9I | GGNCC | 1 cut(s) | 539 |
| AsuHPI | GGTGA | 3 cut(s) | 175, 187, 372 |
| AvaII | GGWCC | 1 cut(s) | 539 |
| Bbv12I | GWGCWC | 1 cut(s) | 517 |
| BbvI | GCAGC | 3 cut(s) | 183, 199, 334 |
| BccI | CCATC | 4 cut(s) | 11, 156, 266, 320 |
| BcoDI | GTCTC | 1 cut(s) | 380 |
| BfaI | CTAG | 3 cut(s) | 438, 533, 630 |
| BfmI | CTRYAG | 1 cut(s) | 73 |
| BisI | GCNGC | 3 cut(s) | 172, 213, 348 |
| BlsI | GCNGC | 3 cut(s) | 173, 214, 349 |
| Bme18I | GGWCC | 1 cut(s) | 539 |
| BmgBI | CACGTC | 1 cut(s) | 447 |
| BmgT120I | GGNCC | 1 cut(s) | 539 |
| BmrI | ACTGGG | 1 cut(s) | 576 |
| BmsI | GCATC | 3 cut(s) | 158, 183, 225 |
| BmuI | ACTGGG | 1 cut(s) | 576 |
| BpmI | CTGGAG | 2 cut(s) | 73, 125 |
| BpuEI | CTTGAG | 2 cut(s) | 184, 590 |
| BsaI | GGTCTC | 1 cut(s) | 380 |
| BsaJI | CCNNGG | 3 cut(s) | 290, 399, 606 |
| BsaWI | WCCGGW | 1 cut(s) | 595 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 303, 333 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 204, 588, 612 |
| Bse1I | ACTGG | 1 cut(s) | 582 |
| BseDI | CCNNGG | 3 cut(s) | 290, 399, 606 |
| BseGI | GGATG | 2 cut(s) | 240, 331 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 204, 588, 612 |
| BseNI | ACTGG | 1 cut(s) | 582 |
| BseXI | GCAGC | 3 cut(s) | 183, 199, 334 |
| BshFI | GGCC | 1 cut(s) | 592 |
| BsiHKAI | GWGCWC | 1 cut(s) | 517 |
| BsiSI | CCGG | 1 cut(s) | 596 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 204, 588, 612 |
| BsmAI | GTCTC | 1 cut(s) | 380 |
| BsmI | GAATGC | 1 cut(s) | 99 |
| BsnI | GGCC | 1 cut(s) | 592 |
| Bso31I | GGTCTC | 1 cut(s) | 380 |
| Bsp1286I | GDGCHC | 1 cut(s) | 517 |
| Bsp143I | GATC | 1 cut(s) | 634 |
| Bsp19I | CCATGG | 1 cut(s) | 290 |
| BspACI | CCGC | 3 cut(s) | 372, 404, 613 |
| BspANI | GGCC | 1 cut(s) | 592 |
| BspHI | TCATGA | 1 cut(s) | 480 |
| BspPI | GGATC | 1 cut(s) | 642 |
| BspTNI | GGTCTC | 1 cut(s) | 380 |
| BsrBI | CCGCTC | 1 cut(s) | 613 |
| BsrI | ACTGG | 1 cut(s) | 582 |
| BssECI | CCNNGG | 3 cut(s) | 290, 399, 606 |
| BssMI | GATC | 1 cut(s) | 634 |
| BssT1I | CCWWGG | 2 cut(s) | 290, 399 |
| Bst6I | CTCTTC | 1 cut(s) | 292 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 651 |
| BstC8I | GCNNGC | 3 cut(s) | 499, 577, 643 |
| BstDSI | CCRYGG | 1 cut(s) | 290 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 202 |
| BstF5I | GGATG | 2 cut(s) | 240, 331 |
| BstKTI | GATC | 1 cut(s) | 637 |
| BstMAI | GTCTC | 1 cut(s) | 380 |
| BstMBI | GATC | 1 cut(s) | 634 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 395, 651 |
| BstNSI | RCATGY | 1 cut(s) | 625 |
| BstSFI | CTRYAG | 1 cut(s) | 73 |
| BstV1I | GCAGC | 3 cut(s) | 183, 199, 334 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 231 |
| BsuRI | GGCC | 1 cut(s) | 592 |
| BtgI | CCRYGG | 1 cut(s) | 290 |
| BtrI | CACGTC | 1 cut(s) | 447 |
| BtsCI | GGATG | 2 cut(s) | 240, 331 |
| BtsIMutI | CAGTG | 1 cut(s) | 589 |
| Cac8I | GCNNGC | 3 cut(s) | 499, 577, 643 |
| CaiI | CAGNNNCTG | 1 cut(s) | 72 |
| CciI | TCATGA | 1 cut(s) | 480 |
| Cfr13I | GGNCC | 1 cut(s) | 539 |
| CviAII | CATG | 4 cut(s) | 291, 386, 481, 622 |
| DpnI | GATC | 1 cut(s) | 636 |
| DpnII | GATC | 1 cut(s) | 634 |
| DraI | TTTAAA | 1 cut(s) | 430 |
| Eam1104I | CTCTTC | 1 cut(s) | 292 |
| EarI | CTCTTC | 1 cut(s) | 292 |
| Eco130I | CCWWGG | 2 cut(s) | 290, 399 |
| Eco31I | GGTCTC | 1 cut(s) | 380 |
| Eco47I | GGWCC | 1 cut(s) | 539 |
| Eco57I | CTGAAG | 1 cut(s) | 414 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 202 |
| EcoT14I | CCWWGG | 2 cut(s) | 290, 399 |
| ErhI | CCWWGG | 2 cut(s) | 290, 399 |
| FaeI | CATG | 4 cut(s) | 294, 389, 484, 625 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 552, 584 |
| FatI | CATG | 4 cut(s) | 290, 385, 480, 621 |
| Fnu4HI | GCNGC | 3 cut(s) | 172, 213, 348 |
| FokI | GGATG | 2 cut(s) | 247, 338 |
| Fsp4HI | GCNGC | 3 cut(s) | 172, 213, 348 |
| FspBI | CTAG | 3 cut(s) | 438, 533, 630 |
| GluI | GCNGC | 3 cut(s) | 172, 213, 348 |
| GsuI | CTGGAG | 2 cut(s) | 73, 125 |
| HaeIII | GGCC | 1 cut(s) | 592 |
| HapII | CCGG | 1 cut(s) | 596 |
| Hin1II | CATG | 4 cut(s) | 294, 389, 484, 625 |
| HinfI | GANTC | 2 cut(s) | 244, 417 |
| HpaII | CCGG | 1 cut(s) | 596 |
| HphI | GGTGA | 3 cut(s) | 175, 187, 372 |
| Hpy166II | GTNNAC | 1 cut(s) | 115 |
| Hpy188I | TCNGA | 1 cut(s) | 610 |
| Hpy188III | TCNNGA | 4 cut(s) | 14, 90, 104, 481 |
| Hpy8I | GTNNAC | 1 cut(s) | 115 |
| HpyAV | CCTTC | 3 cut(s) | 87, 326, 530 |
| HpyCH4IV | ACGT | 1 cut(s) | 446 |
| HpyCH4V | TGCA | 4 cut(s) | 99, 171, 350, 625 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 395, 651 |
| HpySE526I | ACGT | 1 cut(s) | 446 |
| Hsp92II | CATG | 4 cut(s) | 294, 389, 484, 625 |
| Kzo9I | GATC | 1 cut(s) | 634 |
| LmnI | GCTCC | 4 cut(s) | 92, 275, 311, 610 |
| LpnPI | CCDG | 7 cut(s) | 30, 89, 103, 217, 595, 609, 627 |
| Lsp1109I | GCAGC | 3 cut(s) | 183, 199, 334 |
| LweI | GCATC | 3 cut(s) | 158, 183, 225 |
| MaeI | CTAG | 3 cut(s) | 438, 533, 630 |
| MaeII | ACGT | 1 cut(s) | 446 |
| MaeIII | GTNAC | 1 cut(s) | 449 |
| MalI | GATC | 1 cut(s) | 636 |
| MbiI | CCGCTC | 1 cut(s) | 613 |
| MboI | GATC | 1 cut(s) | 634 |
| MboII | GAAGA | 3 cut(s) | 281, 309, 354 |
| MhlI | GDGCHC | 1 cut(s) | 517 |
| MluCI | AATT | 6 cut(s) | 5, 23, 225, 260, 461, 486 |
| MlyI | GAGTC | 1 cut(s) | 238 |
| MnlI | CCTC | 8 cut(s) | 62, 100, 196, 315, 393, 565, 582, 616 |
| MseI | TTAA | 4 cut(s) | 8, 32, 429, 465 |
| MspI | CCGG | 1 cut(s) | 596 |
| Mva1269I | GAATGC | 1 cut(s) | 99 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 395, 651 |
| NcoI | CCATGG | 1 cut(s) | 290 |
| NdeII | GATC | 1 cut(s) | 634 |
| NlaIII | CATG | 4 cut(s) | 294, 389, 484, 625 |
| NspI | RCATGY | 1 cut(s) | 625 |
| PagI | TCATGA | 1 cut(s) | 480 |
| PctI | GAATGC | 1 cut(s) | 99 |
| PfeI | GAWTC | 1 cut(s) | 417 |
| PkrI | GCNGC | 3 cut(s) | 173, 214, 349 |
| PleI | GAGTC | 1 cut(s) | 238 |
| PpsI | GAGTC | 1 cut(s) | 238 |
| PspPI | GGNCC | 1 cut(s) | 539 |
| PstNI | CAGNNNCTG | 1 cut(s) | 72 |
| SaqAI | TTAA | 4 cut(s) | 8, 32, 429, 465 |
| SatI | GCNGC | 3 cut(s) | 172, 213, 348 |
| Sau3AI | GATC | 1 cut(s) | 634 |
| Sau96I | GGNCC | 1 cut(s) | 539 |
| SchI | GAGTC | 1 cut(s) | 238 |
| SduI | GDGCHC | 1 cut(s) | 517 |
| SfaNI | GCATC | 3 cut(s) | 158, 183, 225 |
| SfcI | CTRYAG | 1 cut(s) | 73 |
| SinI | GGWCC | 1 cut(s) | 539 |
| SmlI | CTYRAG | 2 cut(s) | 163, 569 |
| SmoI | CTYRAG | 2 cut(s) | 163, 569 |
| Sse9I | AATT | 6 cut(s) | 5, 23, 225, 260, 461, 486 |
| SsiI | CCGC | 3 cut(s) | 372, 404, 613 |
| SspMI | CTAG | 3 cut(s) | 438, 533, 630 |
| StyI | CCWWGG | 2 cut(s) | 290, 399 |
| TaiI | ACGT | 1 cut(s) | 449 |
| TasI | AATT | 6 cut(s) | 5, 23, 225, 260, 461, 486 |
| TfiI | GAWTC | 1 cut(s) | 417 |
| Tru1I | TTAA | 4 cut(s) | 8, 32, 429, 465 |
| Tru9I | TTAA | 4 cut(s) | 8, 32, 429, 465 |
| TscAI | CASTG | 1 cut(s) | 589 |
| TseI | GCWGC | 3 cut(s) | 171, 212, 347 |
| TspDTI | ATGAA | 4 cut(s) | 69, 282, 497, 542 |
| TspRI | CASTG | 1 cut(s) | 589 |
| VpaK11BI | GGWCC | 1 cut(s) | 539 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 202 |
| XapI | RAATTY | 1 cut(s) | 23 |
| XceI | RCATGY | 1 cut(s) | 625 |
| XspI | CTAG | 3 cut(s) | 438, 533, 630 |