disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 6 - 96 | 9.6e-19 | Rx N-terminal domain |
| NB-ARC | PF00931 | 183 - 354 | 1.2e-33 | NB-ARC domain |
| WHD_DRP | PF23559 | 438 - 510 | 1.5e-21 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 555 - 644 | 1e-11 | Leucine-rich repeat region |
| LRR_14 | PF23598 | 563 - 858 | 7.7e-25 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 700 - 822 | 1.4e-22 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 898 |
| AccB1I | GGYRCC | 1 cut(s) | 898 |
| AccI | GTMKAC | 1 cut(s) | 1901 |
| AciI | CCGC | 6 cut(s) | 346, 373, 678, 1605, 1785, 2291 |
| AclI | AACGTT | 2 cut(s) | 90, 1291 |
| AclWI | GGATC | 2 cut(s) | 420, 2109 |
| AcoI | YGGCCR | 4 cut(s) | 3, 361, 541, 2342 |
| AcuI | CTGAAG | 4 cut(s) | 888, 942, 1809, 2471 |
| AfaI | GTAC | 5 cut(s) | 327, 900, 1693, 1821, 2006 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 623, 895, 2423 |
| AflIII | ACRYGT | 1 cut(s) | 2367 |
| AhlI | ACTAGT | 1 cut(s) | 761 |
| AjnI | CCWGG | 1 cut(s) | 2339 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1181, 1213 |
| AluBI | AGCT | 5 cut(s) | 41, 819, 1612, 2112, 2455 |
| AluI | AGCT | 5 cut(s) | 41, 819, 1612, 2112, 2455 |
| Alw21I | GWGCWC | 1 cut(s) | 1533 |
| Alw26I | GTCTC | 4 cut(s) | 183, 259, 1160, 2138 |
| Alw44I | GTGCAC | 1 cut(s) | 1529 |
| AlwI | GGATC | 2 cut(s) | 420, 2109 |
| Ama87I | CYCGRG | 1 cut(s) | 2253 |
| AoxI | GGCC | 5 cut(s) | 3, 177, 361, 541, 2342 |
| ApaLI | GTGCAC | 1 cut(s) | 1529 |
| ApeKI | GCWGC | 2 cut(s) | 348, 2519 |
| ArsI | GACNNNNNNTTYG | 8 cut(s) | 67, 99, 1718, 1750, 1753, 1785, 2552, 2584 |
| AseI | ATTAAT | 1 cut(s) | 1965 |
| Asp718I | GGTACC | 1 cut(s) | 898 |
| AspLEI | GCGC | 1 cut(s) | 2436 |
| AspS9I | GGNCC | 1 cut(s) | 886 |
| AsuHPI | GGTGA | 8 cut(s) | 85, 266, 592, 934, 985, 1531, 1704, 2501 |
| AvaI | CYCGRG | 1 cut(s) | 2253 |
| AvaII | GGWCC | 1 cut(s) | 886 |
| BaeGI | GKGCMC | 1 cut(s) | 1533 |
| BalI | TGGCCA | 1 cut(s) | 363 |
| BanI | GGYRCC | 1 cut(s) | 898 |
| BanII | GRGCYC | 2 cut(s) | 606, 2245 |
| BbsI | GAAGAC | 2 cut(s) | 876, 2258 |
| Bbv12I | GWGCWC | 1 cut(s) | 1533 |
| BbvI | GCAGC | 2 cut(s) | 335, 2531 |
| BccI | CCATC | 5 cut(s) | 622, 1070, 1357, 1981, 2343 |
| BciT130I | CCWGG | 1 cut(s) | 2341 |
| BclI | TGATCA | 1 cut(s) | 738 |
| BcoDI | GTCTC | 4 cut(s) | 183, 259, 1160, 2138 |
| BcuI | ACTAGT | 1 cut(s) | 761 |
| BfaI | CTAG | 7 cut(s) | 29, 623, 762, 816, 966, 2048, 2504 |
| BfmI | CTRYAG | 1 cut(s) | 1281 |
| BglII | AGATCT | 1 cut(s) | 2299 |
| BisI | GCNGC | 4 cut(s) | 349, 678, 1606, 2520 |
| BlsI | GCNGC | 4 cut(s) | 350, 679, 1607, 2521 |
| BmcAI | AGTACT | 1 cut(s) | 2006 |
| Bme1390I | CCNGG | 1 cut(s) | 2341 |
| Bme18I | GGWCC | 1 cut(s) | 886 |
| BmeT110I | CYCGRG | 1 cut(s) | 2253 |
| BmgT120I | GGNCC | 1 cut(s) | 886 |
| BmiI | GGNNCC | 4 cut(s) | 605, 887, 900, 2334 |
| BmrFI | CCNGG | 1 cut(s) | 2341 |
| BmsI | GCATC | 7 cut(s) | 142, 664, 897, 1718, 1840, 1984, 2325 |
| BpiI | GAAGAC | 2 cut(s) | 876, 2258 |
| BpmI | CTGGAG | 1 cut(s) | 2021 |
| Bpu10I | CCTNAGC | 1 cut(s) | 399 |
| BpuEI | CTTGAG | 2 cut(s) | 167, 191 |
| BsaAI | YACGTR | 2 cut(s) | 61, 1691 |
| BsaJI | CCNNGG | 1 cut(s) | 1905 |
| BsaWI | WCCGGW | 1 cut(s) | 1870 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2401, 2431 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 623, 895, 2423 |
| Bse118I | RCCGGY | 1 cut(s) | 1714 |
| Bse1I | ACTGG | 3 cut(s) | 197, 251, 889 |
| Bse3DI | GCAATG | 2 cut(s) | 1250, 2083 |
| BseBI | CCWGG | 1 cut(s) | 2341 |
| BseDI | CCNNGG | 1 cut(s) | 1905 |
| BseGI | GGATG | 8 cut(s) | 157, 247, 633, 859, 1081, 1368, 2531, 2583 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 623, 895, 2423 |
| BseMI | GCAATG | 2 cut(s) | 1250, 2083 |
| BseMII | CTCAG | 4 cut(s) | 413, 1836, 2096, 2149 |
| BseNI | ACTGG | 3 cut(s) | 197, 251, 889 |
| BseRI | GAGGAG | 4 cut(s) | 596, 1817, 2409, 2527 |
| BseSI | GKGCMC | 1 cut(s) | 1533 |
| BseXI | GCAGC | 2 cut(s) | 335, 2531 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1448 |
| BshFI | GGCC | 5 cut(s) | 5, 179, 363, 543, 2344 |
| BshNI | GGYRCC | 1 cut(s) | 898 |
| BsiEI | CGRYCG | 1 cut(s) | 1448 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1533 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2253 |
| BsiSI | CCGG | 2 cut(s) | 1715, 1871 |
| BslFI | GGGAC | 3 cut(s) | 326, 899, 2514 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 623, 895, 2423 |
| BsmAI | GTCTC | 4 cut(s) | 183, 259, 1160, 2138 |
| BsmFI | GGGAC | 3 cut(s) | 326, 899, 2514 |
| BsmI | GAATGC | 4 cut(s) | 1570, 2087, 2284, 2522 |
| BsnI | GGCC | 5 cut(s) | 5, 179, 363, 543, 2344 |
| BsoBI | CYCGRG | 1 cut(s) | 2253 |
| Bsp1286I | GDGCHC | 3 cut(s) | 606, 1533, 2245 |
| Bsp143I | GATC | 8 cut(s) | 412, 435, 738, 977, 1773, 1996, 2101, 2299 |
| BspACI | CCGC | 6 cut(s) | 346, 373, 678, 1605, 1785, 2291 |
| BspANI | GGCC | 5 cut(s) | 5, 179, 363, 543, 2344 |
| BspCNI | CTCAG | 4 cut(s) | 412, 1837, 2097, 2148 |
| BspHI | TCATGA | 1 cut(s) | 990 |
| BspLI | GGNNCC | 4 cut(s) | 605, 887, 900, 2334 |
| BspPI | GGATC | 2 cut(s) | 420, 2109 |
| BspT107I | GGYRCC | 1 cut(s) | 898 |
| BsrDI | GCAATG | 2 cut(s) | 1250, 2083 |
| BsrFI | RCCGGY | 1 cut(s) | 1714 |
| BsrI | ACTGG | 3 cut(s) | 197, 251, 889 |
| BssAI | RCCGGY | 1 cut(s) | 1714 |
| BssECI | CCNNGG | 1 cut(s) | 1905 |
| BssMI | GATC | 8 cut(s) | 412, 435, 738, 977, 1773, 1996, 2101, 2299 |
| BssNAI | GTATAC | 1 cut(s) | 1902 |
| BssT1I | CCWWGG | 1 cut(s) | 1905 |
| Bst1107I | GTATAC | 1 cut(s) | 1902 |
| Bst2UI | CCWGG | 1 cut(s) | 2341 |
| Bst4CI | ACNGT | 7 cut(s) | 254, 433, 882, 1446, 1586, 1646, 2413 |
| Bst6I | CTCTTC | 1 cut(s) | 63 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1706 |
| BstBAI | YACGTR | 2 cut(s) | 61, 1691 |
| BstC8I | GCNNGC | 4 cut(s) | 118, 181, 1610, 1720 |
| BstEII | GGTNACC | 1 cut(s) | 940 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 621 |
| BstF5I | GGATG | 8 cut(s) | 157, 247, 633, 859, 1081, 1368, 2531, 2583 |
| BstHHI | GCGC | 1 cut(s) | 2436 |
| BstKTI | GATC | 8 cut(s) | 415, 438, 741, 980, 1776, 1999, 2104, 2302 |
| BstMAI | GTCTC | 4 cut(s) | 183, 259, 1160, 2138 |
| BstMBI | GATC | 8 cut(s) | 412, 435, 738, 977, 1773, 1996, 2101, 2299 |
| BstMCI | CGRYCG | 1 cut(s) | 1448 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 137, 311, 662, 686, 1413, 1614, 1706, 1715 |
| BstNI | CCWGG | 1 cut(s) | 2341 |
| BstNSI | RCATGY | 4 cut(s) | 800, 1722, 1734, 2371 |
| BstPI | GGTNACC | 1 cut(s) | 940 |
| BstSCI | CCNGG | 1 cut(s) | 2339 |
| BstSFI | CTRYAG | 1 cut(s) | 1281 |
| BstSLI | GKGCMC | 1 cut(s) | 1533 |
| BstSNI | TACGTA | 2 cut(s) | 61, 1691 |
| BstV1I | GCAGC | 2 cut(s) | 335, 2531 |
| BstV2I | GAAGAC | 2 cut(s) | 876, 2258 |
| BstX2I | RGATCY | 3 cut(s) | 412, 2101, 2299 |
| BstYI | RGATCY | 3 cut(s) | 412, 2101, 2299 |
| BstZ17I | GTATAC | 1 cut(s) | 1902 |
| BsuRI | GGCC | 5 cut(s) | 5, 179, 363, 543, 2344 |
| BtsCI | GGATG | 8 cut(s) | 157, 247, 633, 859, 1081, 1368, 2531, 2583 |
| BtsIMutI | CAGTG | 2 cut(s) | 887, 1591 |
| Cac8I | GCNNGC | 4 cut(s) | 118, 181, 1610, 1720 |
| CciI | TCATGA | 1 cut(s) | 990 |
| CfoI | GCGC | 1 cut(s) | 2436 |
| Cfr10I | RCCGGY | 1 cut(s) | 1714 |
| Cfr13I | GGNCC | 1 cut(s) | 886 |
| CseI | GACGC | 1 cut(s) | 1736 |
| Csp6I | GTAC | 5 cut(s) | 326, 899, 1692, 1820, 2005 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1008, 1043 |
| CviQI | GTAC | 5 cut(s) | 326, 899, 1692, 1820, 2005 |
| DpnI | GATC | 8 cut(s) | 414, 437, 740, 979, 1775, 1998, 2103, 2301 |
| DpnII | GATC | 8 cut(s) | 412, 435, 738, 977, 1773, 1996, 2101, 2299 |
| DraI | TTTAAA | 1 cut(s) | 2364 |
| EaeI | YGGCCR | 4 cut(s) | 3, 361, 541, 2342 |
| Eam1104I | CTCTTC | 1 cut(s) | 63 |
| EarI | CTCTTC | 1 cut(s) | 63 |
| Eco105I | TACGTA | 2 cut(s) | 61, 1691 |
| Eco130I | CCWWGG | 1 cut(s) | 1905 |
| Eco24I | GRGCYC | 2 cut(s) | 606, 2245 |
| Eco47I | GGWCC | 1 cut(s) | 886 |
| Eco57I | CTGAAG | 4 cut(s) | 888, 942, 1809, 2471 |
| Eco88I | CYCGRG | 1 cut(s) | 2253 |
| Eco91I | GGTNACC | 1 cut(s) | 940 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 621 |
| EcoO65I | GGTNACC | 1 cut(s) | 940 |
| EcoRII | CCWGG | 1 cut(s) | 2339 |
| EcoT14I | CCWWGG | 1 cut(s) | 1905 |
| EcoT22I | ATGCAT | 2 cut(s) | 1509, 1724 |
| EcoT38I | GRGCYC | 2 cut(s) | 606, 2245 |
| ErhI | CCWWGG | 1 cut(s) | 1905 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 827, 859, 1362, 1394 |
| FaqI | GGGAC | 3 cut(s) | 326, 899, 2514 |
| FauI | CCCGC | 2 cut(s) | 353, 366 |
| FauNDI | CATATG | 1 cut(s) | 1633 |
| FbaI | TGATCA | 1 cut(s) | 738 |
| FblI | GTMKAC | 1 cut(s) | 1901 |
| Fnu4HI | GCNGC | 4 cut(s) | 349, 678, 1606, 2520 |
| FokI | GGATG | 8 cut(s) | 164, 254, 640, 866, 1088, 1375, 2518, 2590 |
| FriOI | GRGCYC | 2 cut(s) | 606, 2245 |
| Fsp4HI | GCNGC | 4 cut(s) | 349, 678, 1606, 2520 |
| FspBI | CTAG | 7 cut(s) | 29, 623, 762, 816, 966, 2048, 2504 |
| GlaI | GCGC | 1 cut(s) | 2435 |
| GluI | GCNGC | 4 cut(s) | 349, 678, 1606, 2520 |
| GsuI | CTGGAG | 1 cut(s) | 2021 |
| HaeIII | GGCC | 5 cut(s) | 5, 179, 363, 543, 2344 |
| HapII | CCGG | 2 cut(s) | 1715, 1871 |
| HgaI | GACGC | 1 cut(s) | 1736 |
| HhaI | GCGC | 1 cut(s) | 2436 |
| Hin6I | GCGC | 1 cut(s) | 2434 |
| HinP1I | GCGC | 1 cut(s) | 2434 |
| HincII | GTYRAC | 3 cut(s) | 429, 2197, 2355 |
| HindII | GTYRAC | 3 cut(s) | 429, 2197, 2355 |
| HindIII | AAGCTT | 2 cut(s) | 1610, 2110 |
| HinfI | GANTC | 7 cut(s) | 527, 770, 1382, 1874, 1991, 2306, 2376 |
| HpaI | GTTAAC | 1 cut(s) | 429 |
| HpaII | CCGG | 2 cut(s) | 1715, 1871 |
| HphI | GGTGA | 8 cut(s) | 85, 266, 592, 934, 985, 1531, 1704, 2501 |
| Hpy166II | GTNNAC | 7 cut(s) | 429, 864, 1016, 1531, 1902, 2197, 2355 |
| Hpy8I | GTNNAC | 7 cut(s) | 429, 864, 1016, 1531, 1902, 2197, 2355 |
| Hpy99I | CGWCG | 1 cut(s) | 1646 |
| HpyAV | CCTTC | 6 cut(s) | 287, 587, 917, 1174, 1540, 2132 |
| HpyCH4III | ACNGT | 7 cut(s) | 254, 433, 882, 1446, 1586, 1646, 2413 |
| HpyCH4IV | ACGT | 5 cut(s) | 60, 90, 328, 1291, 1690 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 137, 311, 662, 686, 1413, 1614, 1706, 1715 |
| HpySE526I | ACGT | 5 cut(s) | 60, 90, 328, 1291, 1690 |
| HspAI | GCGC | 1 cut(s) | 2434 |
| KpnI | GGTACC | 1 cut(s) | 902 |
| Ksp22I | TGATCA | 1 cut(s) | 738 |
| KspAI | GTTAAC | 1 cut(s) | 429 |
| Kzo9I | GATC | 8 cut(s) | 412, 435, 738, 977, 1773, 1996, 2101, 2299 |
| LmnI | GCTCC | 2 cut(s) | 609, 2338 |
| Lsp1109I | GCAGC | 2 cut(s) | 335, 2531 |
| LweI | GCATC | 7 cut(s) | 142, 664, 897, 1718, 1840, 1984, 2325 |
| MaeI | CTAG | 7 cut(s) | 29, 623, 762, 816, 966, 2048, 2504 |
| MaeII | ACGT | 5 cut(s) | 60, 90, 328, 1291, 1690 |
| MaeIII | GTNAC | 5 cut(s) | 73, 584, 940, 1670, 1946 |
| MalI | GATC | 8 cut(s) | 414, 437, 740, 979, 1775, 1998, 2103, 2301 |
| MboI | GATC | 8 cut(s) | 412, 435, 738, 977, 1773, 1996, 2101, 2299 |
| MfeI | CAATTG | 4 cut(s) | 1675, 1745, 1814, 2189 |
| MflI | RGATCY | 3 cut(s) | 412, 2101, 2299 |
| MhlI | GDGCHC | 3 cut(s) | 606, 1533, 2245 |
| MlsI | TGGCCA | 1 cut(s) | 363 |
| MluNI | TGGCCA | 1 cut(s) | 363 |
| MlyI | GAGTC | 2 cut(s) | 779, 1868 |
| MmeI | TCCRAC | 3 cut(s) | 177, 246, 1270 |
| Mox20I | TGGCCA | 1 cut(s) | 363 |
| Mph1103I | ATGCAT | 2 cut(s) | 1509, 1724 |
| MscI | TGGCCA | 1 cut(s) | 363 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1717, 1980 |
| Msp20I | TGGCCA | 1 cut(s) | 363 |
| MspA1I | CMGCKG | 3 cut(s) | 348, 680, 1787 |
| MspI | CCGG | 2 cut(s) | 1715, 1871 |
| MspR9I | CCNGG | 1 cut(s) | 2341 |
| MunI | CAATTG | 4 cut(s) | 1675, 1745, 1814, 2189 |
| Mva1269I | GAATGC | 4 cut(s) | 1570, 2087, 2284, 2522 |
| MvaI | CCWGG | 1 cut(s) | 2341 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 137, 311, 662, 686, 1413, 1614, 1706, 1715 |
| NdeI | CATATG | 1 cut(s) | 1633 |
| NdeII | GATC | 8 cut(s) | 412, 435, 738, 977, 1773, 1996, 2101, 2299 |
| NlaIV | GGNNCC | 4 cut(s) | 605, 887, 900, 2334 |
| NmeAIII | GCCGAG | 2 cut(s) | 569, 2370 |
| NmuCI | GTSAC | 3 cut(s) | 73, 584, 940 |
| NsiI | ATGCAT | 2 cut(s) | 1509, 1724 |
| NspI | RCATGY | 4 cut(s) | 800, 1722, 1734, 2371 |
| PaeI | GCATGC | 1 cut(s) | 1722 |
| PaeR7I | CTCGAG | 1 cut(s) | 2253 |
| PagI | TCATGA | 1 cut(s) | 990 |
| PciI | ACATGT | 1 cut(s) | 2367 |
| PctI | GAATGC | 4 cut(s) | 1570, 2087, 2284, 2522 |
| PfeI | GAWTC | 5 cut(s) | 527, 1382, 1991, 2306, 2376 |
| PkrI | GCNGC | 4 cut(s) | 350, 679, 1607, 2521 |
| PleI | GAGTC | 2 cut(s) | 778, 1868 |
| PpsI | GAGTC | 2 cut(s) | 778, 1868 |
| Ppu21I | YACGTR | 2 cut(s) | 61, 1691 |
| PscI | ACATGT | 1 cut(s) | 2367 |
| PshBI | ATTAAT | 1 cut(s) | 1965 |
| Psp1406I | AACGTT | 2 cut(s) | 90, 1291 |
| Psp6I | CCWGG | 1 cut(s) | 2339 |
| PspEI | GGTNACC | 1 cut(s) | 940 |
| PspGI | CCWGG | 1 cut(s) | 2339 |
| PspN4I | GGNNCC | 4 cut(s) | 605, 887, 900, 2334 |
| PspPI | GGNCC | 1 cut(s) | 886 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 786, 818 |
| PsuI | RGATCY | 3 cut(s) | 412, 2101, 2299 |
| RsaI | GTAC | 5 cut(s) | 327, 900, 1693, 1821, 2006 |
| RsaNI | GTAC | 5 cut(s) | 326, 899, 1692, 1820, 2005 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1717, 1980 |
| SatI | GCNGC | 4 cut(s) | 349, 678, 1606, 2520 |
| Sau3AI | GATC | 8 cut(s) | 412, 435, 738, 977, 1773, 1996, 2101, 2299 |
| Sau96I | GGNCC | 1 cut(s) | 886 |
| ScaI | AGTACT | 1 cut(s) | 2006 |
| SchI | GAGTC | 2 cut(s) | 779, 1868 |
| ScrFI | CCNGG | 1 cut(s) | 2341 |
| SduI | GDGCHC | 3 cut(s) | 606, 1533, 2245 |
| SfaNI | GCATC | 7 cut(s) | 142, 664, 897, 1718, 1840, 1984, 2325 |
| SfcI | CTRYAG | 1 cut(s) | 1281 |
| Sfr274I | CTCGAG | 1 cut(s) | 2253 |
| SinI | GGWCC | 1 cut(s) | 886 |
| SlaI | CTCGAG | 1 cut(s) | 2253 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1717, 1980 |
| SmlI | CTYRAG | 3 cut(s) | 146, 206, 2253 |
| SmoI | CTYRAG | 3 cut(s) | 146, 206, 2253 |
| SnaBI | TACGTA | 2 cut(s) | 61, 1691 |
| SpeI | ACTAGT | 1 cut(s) | 761 |
| SphI | GCATGC | 1 cut(s) | 1722 |
| SsiI | CCGC | 6 cut(s) | 346, 373, 678, 1605, 1785, 2291 |
| SspI | AATATT | 3 cut(s) | 936, 1420, 2142 |
| SspMI | CTAG | 7 cut(s) | 29, 623, 762, 816, 966, 2048, 2504 |
| StyD4I | CCNGG | 1 cut(s) | 2339 |
| StyI | CCWWGG | 1 cut(s) | 1905 |
| TaaI | ACNGT | 7 cut(s) | 254, 433, 882, 1446, 1586, 1646, 2413 |
| TaiI | ACGT | 5 cut(s) | 63, 93, 331, 1294, 1693 |
| TaqI | TCGA | 4 cut(s) | 522, 980, 2254, 2540 |
| TatI | WGTACW | 1 cut(s) | 2004 |
| TauI | GCSGC | 2 cut(s) | 680, 1608 |
| TfiI | GAWTC | 5 cut(s) | 527, 1382, 1991, 2306, 2376 |
| TscAI | CASTG | 2 cut(s) | 887, 1591 |
| TseFI | GTSAC | 3 cut(s) | 73, 584, 940 |
| TseI | GCWGC | 2 cut(s) | 348, 2519 |
| Tsp45I | GTSAC | 3 cut(s) | 73, 584, 940 |
| TspDTI | ATGAA | 4 cut(s) | 69, 540, 979, 1193 |
| TspGWI | ACGGA | 1 cut(s) | 1405 |
| TspRI | CASTG | 2 cut(s) | 887, 1591 |
| VneI | GTGCAC | 1 cut(s) | 1529 |
| VpaK11BI | GGWCC | 1 cut(s) | 886 |
| VspI | ATTAAT | 1 cut(s) | 1965 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 621 |
| XceI | RCATGY | 4 cut(s) | 800, 1722, 1734, 2371 |
| XhoI | CTCGAG | 1 cut(s) | 2253 |
| XmiI | GTMKAC | 1 cut(s) | 1901 |
| XspI | CTAG | 7 cut(s) | 29, 623, 762, 816, 966, 2048, 2504 |
| ZrmI | AGTACT | 1 cut(s) | 2006 |
| Zsp2I | ATGCAT | 2 cut(s) | 1509, 1724 |