disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 7 - 99 | 2e-19 | Rx N-terminal domain |
| NB-ARC | PF00931 | 189 - 360 | 8.7e-35 | NB-ARC domain |
| WHD_DRP | PF23559 | 445 - 519 | 3.8e-20 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 570 - 859 | 4.2e-29 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 595 - 650 | 1.3e-06 | Leucine rich repeat |
| LRR_R13L1-DRL21 | PF25019 | 705 - 824 | 3.1e-27 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 384, 2765 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2723 |
| AatII | GACGTC | 1 cut(s) | 2796 |
| Acc36I | ACCTGC | 2 cut(s) | 33, 2706 |
| AccB1I | GGYRCC | 1 cut(s) | 2345 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2287 |
| AccI | GTMKAC | 1 cut(s) | 2796 |
| AccII | CGCG | 3 cut(s) | 967, 2054, 2354 |
| AciI | CCGC | 4 cut(s) | 500, 2303, 2352, 2622 |
| AclWI | GGATC | 7 cut(s) | 210, 725, 1006, 1242, 2382, 2813, 2826 |
| AcoI | YGGCCR | 3 cut(s) | 3, 355, 2300 |
| AcuI | CTGAAG | 5 cut(s) | 824, 903, 2126, 2711, 2826 |
| AcyI | GRCGYC | 1 cut(s) | 2793 |
| AfaI | GTAC | 7 cut(s) | 775, 854, 1662, 1717, 2149, 2274, 2641 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 629, 2143, 2287, 2435, 2571 |
| AflII | CTTAAG | 2 cut(s) | 1651, 1852 |
| AflIII | ACRYGT | 1 cut(s) | 2082 |
| AjiI | CACGTC | 2 cut(s) | 238, 2083 |
| AjnI | CCWGG | 4 cut(s) | 150, 1473, 1499, 2286 |
| Alw21I | GWGCWC | 2 cut(s) | 150, 2814 |
| Alw26I | GTCTC | 3 cut(s) | 223, 730, 2665 |
| AlwI | GGATC | 7 cut(s) | 210, 725, 1006, 1242, 2382, 2813, 2826 |
| Ama87I | CYCGRG | 1 cut(s) | 2813 |
| AoxI | GGCC | 6 cut(s) | 3, 180, 355, 1293, 2300, 2777 |
| ApeKI | GCWGC | 3 cut(s) | 120, 166, 434 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 70, 102, 1780, 1812, 1921, 1953 |
| AseI | ATTAAT | 2 cut(s) | 1992, 2060 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 308, 1260, 1491 |
| AspLEI | GCGC | 2 cut(s) | 2197, 2356 |
| AspS9I | GGNCC | 6 cut(s) | 610, 1294, 1636, 1788, 2134, 2778 |
| AsuHPI | GGTGA | 7 cut(s) | 757, 970, 1127, 1445, 1683, 1850, 2554 |
| AvaI | CYCGRG | 1 cut(s) | 2813 |
| AvaII | GGWCC | 4 cut(s) | 610, 1636, 1788, 2134 |
| BaeGI | GKGCMC | 1 cut(s) | 2516 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1440, 1473 |
| BalI | TGGCCA | 1 cut(s) | 357 |
| BamHI | GGATCC | 1 cut(s) | 2818 |
| BanI | GGYRCC | 1 cut(s) | 2345 |
| BanII | GRGCYC | 1 cut(s) | 2814 |
| BbsI | GAAGAC | 1 cut(s) | 2495 |
| Bbv12I | GWGCWC | 2 cut(s) | 150, 2814 |
| BbvI | GCAGC | 3 cut(s) | 132, 178, 421 |
| BccI | CCATC | 5 cut(s) | 223, 637, 2405, 2569, 2747 |
| BceAI | ACGGC | 2 cut(s) | 1156, 2315 |
| BciT130I | CCWGG | 4 cut(s) | 152, 1475, 1501, 2288 |
| BciVI | GTATCC | 1 cut(s) | 2176 |
| BcoDI | GTCTC | 3 cut(s) | 223, 730, 2665 |
| BfaI | CTAG | 7 cut(s) | 242, 659, 831, 866, 1721, 2078, 2250 |
| BfmI | CTRYAG | 2 cut(s) | 1299, 1804 |
| BfrI | CTTAAG | 2 cut(s) | 1651, 1852 |
| BfuAI | ACCTGC | 2 cut(s) | 33, 2706 |
| BfuI | GTATCC | 1 cut(s) | 2176 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 11 |
| BglII | AGATCT | 3 cut(s) | 833, 2119, 2311 |
| BisI | GCNGC | 4 cut(s) | 121, 167, 435, 2303 |
| BlsI | GCNGC | 4 cut(s) | 122, 168, 436, 2304 |
| BmcAI | AGTACT | 1 cut(s) | 854 |
| Bme1390I | CCNGG | 4 cut(s) | 152, 1475, 1501, 2288 |
| Bme18I | GGWCC | 4 cut(s) | 610, 1636, 1788, 2134 |
| BmeT110I | CYCGRG | 1 cut(s) | 2813 |
| BmgBI | CACGTC | 2 cut(s) | 238, 2083 |
| BmgT120I | GGNCC | 6 cut(s) | 610, 1294, 1636, 1788, 2134, 2778 |
| BmiI | GGNNCC | 4 cut(s) | 611, 1296, 2347, 2820 |
| BmrFI | CCNGG | 4 cut(s) | 152, 1475, 1501, 2288 |
| BmrI | ACTGGG | 1 cut(s) | 2352 |
| BmsI | GCATC | 4 cut(s) | 145, 775, 1937, 2314 |
| BmuI | ACTGGG | 1 cut(s) | 2352 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2085 |
| BpiI | GAAGAC | 1 cut(s) | 2495 |
| BpmI | CTGGAG | 3 cut(s) | 134, 2051, 2309 |
| Bpu10I | CCTNAGC | 2 cut(s) | 96, 2685 |
| BsaAI | YACGTR | 1 cut(s) | 1715 |
| BsaHI | GRCGYC | 1 cut(s) | 2793 |
| BsaJI | CCNNGG | 1 cut(s) | 1500 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2228, 2258 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 629, 2143, 2287, 2435, 2571 |
| Bse1I | ACTGG | 4 cut(s) | 200, 781, 1694, 2358 |
| Bse3DI | GCAATG | 2 cut(s) | 484, 1062 |
| BseBI | CCWGG | 4 cut(s) | 152, 1475, 1501, 2288 |
| BseDI | CCNNGG | 1 cut(s) | 1500 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 629, 2143, 2287, 2435, 2571 |
| BseMI | GCAATG | 2 cut(s) | 484, 1062 |
| BseMII | CTCAG | 6 cut(s) | 150, 285, 387, 452, 792, 2832 |
| BseNI | ACTGG | 4 cut(s) | 200, 781, 1694, 2358 |
| BseRI | GAGGAG | 4 cut(s) | 1646, 2144, 2273, 2421 |
| BseSI | GKGCMC | 1 cut(s) | 2516 |
| BseX3I | CGGCCG | 1 cut(s) | 2300 |
| BseXI | GCAGC | 3 cut(s) | 132, 178, 421 |
| BsgI | GTGCAG | 1 cut(s) | 1577 |
| Bsh1236I | CGCG | 3 cut(s) | 967, 2054, 2354 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2303 |
| BshFI | GGCC | 6 cut(s) | 5, 182, 357, 1295, 2302, 2779 |
| BshNI | GGYRCC | 1 cut(s) | 2345 |
| BsiEI | CGRYCG | 1 cut(s) | 2303 |
| BsiHKAI | GWGCWC | 2 cut(s) | 150, 2814 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2813 |
| BslFI | GGGAC | 2 cut(s) | 914, 1517 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 629, 2143, 2287, 2435, 2571 |
| BsmAI | GTCTC | 3 cut(s) | 223, 730, 2665 |
| BsmFI | GGGAC | 2 cut(s) | 914, 1517 |
| BsmI | GAATGC | 1 cut(s) | 330 |
| BsnI | GGCC | 6 cut(s) | 5, 182, 357, 1295, 2302, 2779 |
| BsoBI | CYCGRG | 1 cut(s) | 2813 |
| Bsp1286I | GDGCHC | 3 cut(s) | 150, 2516, 2814 |
| Bsp1407I | TGTACA | 1 cut(s) | 2272 |
| Bsp68I | TCGCGA | 1 cut(s) | 2054 |
| BspACI | CCGC | 4 cut(s) | 500, 2303, 2352, 2622 |
| BspANI | GGCC | 6 cut(s) | 5, 182, 357, 1295, 2302, 2779 |
| BspCNI | CTCAG | 6 cut(s) | 151, 286, 388, 451, 793, 2833 |
| BspFNI | CGCG | 3 cut(s) | 967, 2054, 2354 |
| BspHI | TCATGA | 2 cut(s) | 460, 679 |
| BspLI | GGNNCC | 4 cut(s) | 611, 1296, 2347, 2820 |
| BspMI | ACCTGC | 2 cut(s) | 33, 2706 |
| BspPI | GGATC | 7 cut(s) | 210, 725, 1006, 1242, 2382, 2813, 2826 |
| BspQI | GCTCTTC | 1 cut(s) | 2802 |
| BspT107I | GGYRCC | 1 cut(s) | 2345 |
| BspTI | CTTAAG | 2 cut(s) | 1651, 1852 |
| BsrDI | GCAATG | 2 cut(s) | 484, 1062 |
| BsrGI | TGTACA | 1 cut(s) | 2272 |
| BsrI | ACTGG | 4 cut(s) | 200, 781, 1694, 2358 |
| BssECI | CCNNGG | 1 cut(s) | 1500 |
| BssNI | GRCGYC | 1 cut(s) | 2793 |
| Bst2UI | CCWGG | 4 cut(s) | 152, 1475, 1501, 2288 |
| Bst4CI | ACNGT | 6 cut(s) | 49, 1325, 1904, 2494, 2592, 2789 |
| Bst6I | CTCTTC | 6 cut(s) | 843, 1824, 2403, 2574, 2711, 2802 |
| BstACI | GRCGYC | 1 cut(s) | 2793 |
| BstAFI | CTTAAG | 2 cut(s) | 1651, 1852 |
| BstAUI | TGTACA | 1 cut(s) | 2272 |
| BstBAI | YACGTR | 1 cut(s) | 1715 |
| BstC8I | GCNNGC | 4 cut(s) | 12, 184, 1145, 2206 |
| BstEII | GGTNACC | 1 cut(s) | 958 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2569 |
| BstFNI | CGCG | 3 cut(s) | 967, 2054, 2354 |
| BstHHI | GCGC | 2 cut(s) | 2197, 2356 |
| BstMAI | GTCTC | 3 cut(s) | 223, 730, 2665 |
| BstMCI | CGRYCG | 1 cut(s) | 2303 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 11, 140, 668, 1601, 2201 |
| BstNI | CCWGG | 4 cut(s) | 152, 1475, 1501, 2288 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2085 |
| BstPI | GGTNACC | 1 cut(s) | 958 |
| BstSCI | CCNGG | 4 cut(s) | 150, 1473, 1499, 2286 |
| BstSFI | CTRYAG | 2 cut(s) | 1299, 1804 |
| BstSLI | GKGCMC | 1 cut(s) | 2516 |
| BstSNI | TACGTA | 1 cut(s) | 1715 |
| BstUI | CGCG | 3 cut(s) | 967, 2054, 2354 |
| BstV1I | GCAGC | 3 cut(s) | 132, 178, 421 |
| BstV2I | GAAGAC | 1 cut(s) | 2495 |
| BstX2I | RGATCY | 6 cut(s) | 833, 1234, 2119, 2311, 2387, 2818 |
| BstYI | RGATCY | 6 cut(s) | 833, 1234, 2119, 2311, 2387, 2818 |
| BstZI | CGGCCG | 1 cut(s) | 2300 |
| BsuI | GTATCC | 1 cut(s) | 2176 |
| BsuRI | GGCC | 6 cut(s) | 5, 182, 357, 1295, 2302, 2779 |
| BtrI | CACGTC | 2 cut(s) | 238, 2083 |
| BtsI | GCAGTG | 2 cut(s) | 827, 1964 |
| BtsIMutI | CAGTG | 6 cut(s) | 255, 827, 924, 1701, 1964, 2597 |
| BtuMI | TCGCGA | 1 cut(s) | 2054 |
| BveI | ACCTGC | 2 cut(s) | 33, 2706 |
| Cac8I | GCNNGC | 4 cut(s) | 12, 184, 1145, 2206 |
| CciI | TCATGA | 2 cut(s) | 460, 679 |
| CfoI | GCGC | 2 cut(s) | 2197, 2356 |
| Cfr13I | GGNCC | 6 cut(s) | 610, 1294, 1636, 1788, 2134, 2778 |
| CseI | GACGC | 1 cut(s) | 1010 |
| Csp6I | GTAC | 7 cut(s) | 774, 853, 1661, 1716, 2148, 2273, 2640 |
| CviAII | CATG | 8 cut(s) | 461, 680, 1009, 1177, 1535, 1547, 2270, 2652 |
| CviQI | GTAC | 7 cut(s) | 774, 853, 1661, 1716, 2148, 2273, 2640 |
| DraI | TTTAAA | 2 cut(s) | 909, 2325 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2723 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2723 |
| EaeI | YGGCCR | 3 cut(s) | 3, 355, 2300 |
| EagI | CGGCCG | 1 cut(s) | 2300 |
| Eam1104I | CTCTTC | 6 cut(s) | 843, 1824, 2403, 2574, 2711, 2802 |
| EarI | CTCTTC | 6 cut(s) | 843, 1824, 2403, 2574, 2711, 2802 |
| Ecl136II | GAGCTC | 1 cut(s) | 2812 |
| EclXI | CGGCCG | 1 cut(s) | 2300 |
| Eco105I | TACGTA | 1 cut(s) | 1715 |
| Eco24I | GRGCYC | 1 cut(s) | 2814 |
| Eco32I | GATATC | 1 cut(s) | 2370 |
| Eco47I | GGWCC | 4 cut(s) | 610, 1636, 1788, 2134 |
| Eco52I | CGGCCG | 1 cut(s) | 2300 |
| Eco53kI | GAGCTC | 1 cut(s) | 2812 |
| Eco57I | CTGAAG | 5 cut(s) | 824, 903, 2126, 2711, 2826 |
| Eco88I | CYCGRG | 1 cut(s) | 2813 |
| Eco91I | GGTNACC | 1 cut(s) | 958 |
| EcoICRI | GAGCTC | 1 cut(s) | 2812 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2569 |
| EcoO109I | RGGNCCY | 2 cut(s) | 610, 1788 |
| EcoO65I | GGTNACC | 1 cut(s) | 958 |
| EcoRII | CCWGG | 4 cut(s) | 150, 1473, 1499, 2286 |
| EcoRV | GATATC | 1 cut(s) | 2370 |
| EcoT22I | ATGCAT | 1 cut(s) | 1536 |
| EcoT38I | GRGCYC | 1 cut(s) | 2814 |
| FaeI | CATG | 8 cut(s) | 464, 683, 1012, 1180, 1538, 1550, 2273, 2655 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 293, 325, 2192, 2224 |
| FaqI | GGGAC | 2 cut(s) | 914, 1517 |
| FatI | CATG | 8 cut(s) | 460, 679, 1008, 1176, 1534, 1546, 2269, 2651 |
| FblI | GTMKAC | 1 cut(s) | 2796 |
| Fnu4HI | GCNGC | 4 cut(s) | 121, 167, 435, 2303 |
| FriOI | GRGCYC | 1 cut(s) | 2814 |
| Fsp4HI | GCNGC | 4 cut(s) | 121, 167, 435, 2303 |
| FspBI | CTAG | 7 cut(s) | 242, 659, 831, 866, 1721, 2078, 2250 |
| GlaI | GCGC | 2 cut(s) | 2196, 2355 |
| GluI | GCNGC | 4 cut(s) | 121, 167, 435, 2303 |
| GsuI | CTGGAG | 3 cut(s) | 134, 2051, 2309 |
| HaeIII | GGCC | 6 cut(s) | 5, 182, 357, 1295, 2302, 2779 |
| HgaI | GACGC | 1 cut(s) | 1010 |
| HhaI | GCGC | 2 cut(s) | 2197, 2356 |
| Hin1I | GRCGYC | 1 cut(s) | 2793 |
| Hin1II | CATG | 8 cut(s) | 464, 683, 1012, 1180, 1538, 1550, 2273, 2655 |
| Hin6I | GCGC | 2 cut(s) | 2195, 2354 |
| HinP1I | GCGC | 2 cut(s) | 2195, 2354 |
| HincII | GTYRAC | 5 cut(s) | 22, 235, 423, 1887, 2797 |
| HindII | GTYRAC | 5 cut(s) | 22, 235, 423, 1887, 2797 |
| HindIII | AAGCTT | 2 cut(s) | 2128, 2222 |
| HinfI | GANTC | 2 cut(s) | 464, 1733 |
| HpaI | GTTAAC | 1 cut(s) | 423 |
| HphI | GGTGA | 7 cut(s) | 757, 970, 1127, 1445, 1683, 1850, 2554 |
| Hpy188I | TCNGA | 6 cut(s) | 33, 267, 441, 730, 2757, 2806 |
| Hpy99I | CGWCG | 3 cut(s) | 1668, 2757, 2798 |
| HpyCH4III | ACNGT | 6 cut(s) | 49, 1325, 1904, 2494, 2592, 2789 |
| HpyCH4IV | ACGT | 5 cut(s) | 237, 1663, 1714, 2082, 2793 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 11, 140, 668, 1601, 2201 |
| HpySE526I | ACGT | 5 cut(s) | 237, 1663, 1714, 2082, 2793 |
| Hsp92I | GRCGYC | 1 cut(s) | 2793 |
| Hsp92II | CATG | 8 cut(s) | 464, 683, 1012, 1180, 1538, 1550, 2273, 2655 |
| HspAI | GCGC | 2 cut(s) | 2195, 2354 |
| KspAI | GTTAAC | 1 cut(s) | 423 |
| LguI | GCTCTTC | 1 cut(s) | 2802 |
| LmnI | GCTCC | 4 cut(s) | 153, 793, 2236, 2260 |
| Lsp1109I | GCAGC | 3 cut(s) | 132, 178, 421 |
| LweI | GCATC | 4 cut(s) | 145, 775, 1937, 2314 |
| MaeI | CTAG | 7 cut(s) | 242, 659, 831, 866, 1721, 2078, 2250 |
| MaeII | ACGT | 5 cut(s) | 237, 1663, 1714, 2082, 2793 |
| MaeIII | GTNAC | 8 cut(s) | 76, 958, 1136, 1383, 1710, 2295, 2467, 2789 |
| MfeI | CAATTG | 2 cut(s) | 516, 1587 |
| MflI | RGATCY | 6 cut(s) | 833, 1234, 2119, 2311, 2387, 2818 |
| MhlI | GDGCHC | 3 cut(s) | 150, 2516, 2814 |
| MlsI | TGGCCA | 1 cut(s) | 357 |
| MluNI | TGGCCA | 1 cut(s) | 357 |
| MmeI | TCCRAC | 5 cut(s) | 180, 2342, 2476, 2584, 2735 |
| Mox20I | TGGCCA | 1 cut(s) | 357 |
| Mph1103I | ATGCAT | 1 cut(s) | 1536 |
| MroXI | GAANNNNTTC | 3 cut(s) | 308, 1260, 1491 |
| MscI | TGGCCA | 1 cut(s) | 357 |
| MslI | CAYNNNNRTG | 1 cut(s) | 684 |
| Msp20I | TGGCCA | 1 cut(s) | 357 |
| MspA1I | CMGCKG | 2 cut(s) | 208, 502 |
| MspCI | CTTAAG | 2 cut(s) | 1651, 1852 |
| MspR9I | CCNGG | 4 cut(s) | 152, 1475, 1501, 2288 |
| MunI | CAATTG | 2 cut(s) | 516, 1587 |
| Mva1269I | GAATGC | 1 cut(s) | 330 |
| MvaI | CCWGG | 4 cut(s) | 152, 1475, 1501, 2288 |
| MvnI | CGCG | 3 cut(s) | 967, 2054, 2354 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 11, 140, 668, 1601, 2201 |
| NlaIII | CATG | 8 cut(s) | 464, 683, 1012, 1180, 1538, 1550, 2273, 2655 |
| NlaIV | GGNNCC | 4 cut(s) | 611, 1296, 2347, 2820 |
| NmeAIII | GCCGAG | 2 cut(s) | 31, 2067 |
| NmuCI | GTSAC | 5 cut(s) | 76, 958, 1136, 1383, 2789 |
| NruI | TCGCGA | 1 cut(s) | 2054 |
| NsiI | ATGCAT | 1 cut(s) | 1536 |
| PaeR7I | CTCGAG | 1 cut(s) | 2813 |
| PagI | TCATGA | 2 cut(s) | 460, 679 |
| PciSI | GCTCTTC | 1 cut(s) | 2802 |
| PctI | GAATGC | 1 cut(s) | 330 |
| PdmI | GAANNNNTTC | 3 cut(s) | 308, 1260, 1491 |
| PfeI | GAWTC | 2 cut(s) | 464, 1733 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2287 |
| PfoI | TCCNGGA | 3 cut(s) | 150, 1473, 2286 |
| PkrI | GCNGC | 4 cut(s) | 122, 168, 436, 2304 |
| Ppu21I | YACGTR | 1 cut(s) | 1715 |
| PpuMI | RGGWCCY | 2 cut(s) | 610, 1788 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2085 |
| PshBI | ATTAAT | 2 cut(s) | 1992, 2060 |
| PsiI | TTATAA | 2 cut(s) | 384, 2765 |
| Psp124BI | GAGCTC | 1 cut(s) | 2814 |
| Psp5II | RGGWCCY | 2 cut(s) | 610, 1788 |
| Psp6I | CCWGG | 4 cut(s) | 150, 1473, 1499, 2286 |
| PspEI | GGTNACC | 1 cut(s) | 958 |
| PspGI | CCWGG | 4 cut(s) | 150, 1473, 1499, 2286 |
| PspN4I | GGNNCC | 4 cut(s) | 611, 1296, 2347, 2820 |
| PspPI | GGNCC | 6 cut(s) | 610, 1294, 1636, 1788, 2134, 2778 |
| PspPPI | RGGWCCY | 2 cut(s) | 610, 1788 |
| PspXI | VCTCGAGB | 1 cut(s) | 2813 |
| PsuI | RGATCY | 6 cut(s) | 833, 1234, 2119, 2311, 2387, 2818 |
| PvuII | CAGCTG | 1 cut(s) | 208 |
| RruI | TCGCGA | 1 cut(s) | 2054 |
| RsaI | GTAC | 7 cut(s) | 775, 854, 1662, 1717, 2149, 2274, 2641 |
| RsaNI | GTAC | 7 cut(s) | 774, 853, 1661, 1716, 2148, 2273, 2640 |
| RseI | CAYNNNNRTG | 1 cut(s) | 684 |
| SacI | GAGCTC | 1 cut(s) | 2814 |
| SalI | GTCGAC | 1 cut(s) | 2795 |
| SapI | GCTCTTC | 1 cut(s) | 2802 |
| SatI | GCNGC | 4 cut(s) | 121, 167, 435, 2303 |
| Sau96I | GGNCC | 6 cut(s) | 610, 1294, 1636, 1788, 2134, 2778 |
| ScaI | AGTACT | 1 cut(s) | 854 |
| ScrFI | CCNGG | 4 cut(s) | 152, 1475, 1501, 2288 |
| SduI | GDGCHC | 3 cut(s) | 150, 2516, 2814 |
| SfaNI | GCATC | 4 cut(s) | 145, 775, 1937, 2314 |
| SfcI | CTRYAG | 2 cut(s) | 1299, 1804 |
| Sfr274I | CTCGAG | 1 cut(s) | 2813 |
| SinI | GGWCC | 4 cut(s) | 610, 1636, 1788, 2134 |
| SlaI | CTCGAG | 1 cut(s) | 2813 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 684 |
| SmlI | CTYRAG | 3 cut(s) | 1651, 1852, 2813 |
| SmoI | CTYRAG | 3 cut(s) | 1651, 1852, 2813 |
| SnaBI | TACGTA | 1 cut(s) | 1715 |
| SsiI | CCGC | 4 cut(s) | 500, 2303, 2352, 2622 |
| SspI | AATATT | 3 cut(s) | 537, 954, 2329 |
| SspMI | CTAG | 7 cut(s) | 242, 659, 831, 866, 1721, 2078, 2250 |
| SstI | GAGCTC | 1 cut(s) | 2814 |
| StyD4I | CCNGG | 4 cut(s) | 150, 1473, 1499, 2286 |
| TaaI | ACNGT | 6 cut(s) | 49, 1325, 1904, 2494, 2592, 2789 |
| TaiI | ACGT | 5 cut(s) | 240, 1666, 1717, 2085, 2796 |
| TaqI | TCGA | 9 cut(s) | 108, 338, 522, 1264, 1863, 1945, 2568, 2796, 2814 |
| TatI | WGTACW | 3 cut(s) | 852, 2272, 2639 |
| TauI | GCSGC | 1 cut(s) | 2305 |
| TfiI | GAWTC | 2 cut(s) | 464, 1733 |
| TscAI | CASTG | 6 cut(s) | 262, 827, 924, 1701, 1971, 2597 |
| TseFI | GTSAC | 5 cut(s) | 76, 958, 1136, 1383, 2789 |
| TseI | GCWGC | 3 cut(s) | 120, 166, 434 |
| Tsp45I | GTSAC | 5 cut(s) | 76, 958, 1136, 1383, 2789 |
| TspGWI | ACGGA | 1 cut(s) | 1628 |
| TspRI | CASTG | 6 cut(s) | 262, 827, 924, 1701, 1971, 2597 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2287 |
| Vha464I | CTTAAG | 2 cut(s) | 1651, 1852 |
| VpaK11BI | GGWCC | 4 cut(s) | 610, 1636, 1788, 2134 |
| VspI | ATTAAT | 2 cut(s) | 1992, 2060 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2569 |
| XbaI | TCTAGA | 3 cut(s) | 830, 865, 2249 |
| XhoI | CTCGAG | 1 cut(s) | 2813 |
| XmiI | GTMKAC | 1 cut(s) | 2796 |
| XmnI | GAANNNNTTC | 3 cut(s) | 308, 1260, 1491 |
| XspI | CTAG | 7 cut(s) | 242, 659, 831, 866, 1721, 2078, 2250 |
| ZraI | GACGTC | 1 cut(s) | 2794 |
| ZrmI | AGTACT | 1 cut(s) | 854 |
| Zsp2I | ATGCAT | 1 cut(s) | 1536 |