disease resistance protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 6 - 95 | 1.3e-22 | Rx N-terminal domain |
| NB-ARC | PF00931 | 184 - 354 | 3.1e-32 | NB-ARC domain |
| WHD_DRP | PF23559 | 442 - 513 | 1.3e-21 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 563 - 905 | 5.8e-27 | Leucine-rich repeat region |
| LRR_8 | PF13855 | 563 - 619 | 5.7e-07 | Leucine rich repeat |
| LRR_8 | PF13855 | 586 - 642 | 3.5e-07 | Leucine rich repeat |
| LRR_R13L1-DRL21 | PF25019 | 704 - 837 | 3e-22 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 1691, 2756 |
| AccB1I | GGYRCC | 1 cut(s) | 923 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 61 |
| AccI | GTMKAC | 1 cut(s) | 1920 |
| AccII | CGCG | 3 cut(s) | 149, 955, 1456 |
| AciI | CCGC | 6 cut(s) | 149, 740, 1171, 1456, 1574, 1912 |
| AclI | AACGTT | 2 cut(s) | 1300, 1907 |
| AclWI | GGATC | 4 cut(s) | 890, 903, 2241, 2402 |
| AcoI | YGGCCR | 1 cut(s) | 352 |
| AcsI | RAATTY | 6 cut(s) | 452, 473, 787, 1940, 2498, 2879 |
| AcuI | CTGAAG | 2 cut(s) | 27, 1883 |
| AfaI | GTAC | 8 cut(s) | 303, 349, 732, 1119, 1654, 2270, 2310, 2737 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 61, 2230, 2804 |
| AflIII | ACRYGT | 2 cut(s) | 58, 70 |
| AgeI | ACCGGT | 1 cut(s) | 2039 |
| AhlI | ACTAGT | 2 cut(s) | 556, 989 |
| AjiI | CACGTC | 1 cut(s) | 2857 |
| AluBI | AGCT | 9 cut(s) | 131, 140, 422, 962, 1703, 1969, 2053, 2368, 2452 |
| AluI | AGCT | 9 cut(s) | 131, 140, 422, 962, 1703, 1969, 2053, 2368, 2452 |
| Alw21I | GWGCWC | 2 cut(s) | 147, 254 |
| Alw26I | GTCTC | 5 cut(s) | 181, 518, 531, 721, 1851 |
| AlwI | GGATC | 4 cut(s) | 890, 903, 2241, 2402 |
| AoxI | GGCC | 3 cut(s) | 352, 2290, 2841 |
| ApeKI | GCWGC | 4 cut(s) | 1145, 2320, 2452, 2721 |
| ApoI | RAATTY | 6 cut(s) | 452, 473, 787, 1940, 2498, 2879 |
| AseI | ATTAAT | 1 cut(s) | 2715 |
| AsiGI | ACCGGT | 1 cut(s) | 2039 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 132 |
| AspLEI | GCGC | 2 cut(s) | 1692, 2757 |
| AspS9I | GGNCC | 4 cut(s) | 1618, 2290, 2462, 2841 |
| AsuC2I | CCSGG | 2 cut(s) | 1608, 2819 |
| AsuHPI | GGTGA | 8 cut(s) | 40, 299, 1034, 1082, 1622, 1898, 2096, 2819 |
| AvaII | GGWCC | 2 cut(s) | 1618, 2462 |
| AxyI | CCTNAGG | 1 cut(s) | 928 |
| BalI | TGGCCA | 1 cut(s) | 354 |
| BamHI | GGATCC | 1 cut(s) | 895 |
| BanI | GGYRCC | 1 cut(s) | 923 |
| BauI | CACGAG | 1 cut(s) | 1646 |
| BbsI | GAAGAC | 2 cut(s) | 1187, 2580 |
| Bbv12I | GWGCWC | 2 cut(s) | 147, 254 |
| BbvI | GCAGC | 4 cut(s) | 1132, 2307, 2439, 2708 |
| BccI | CCATC | 3 cut(s) | 761, 1061, 2629 |
| BceAI | ACGGC | 1 cut(s) | 2464 |
| BcnI | CCSGG | 2 cut(s) | 1608, 2819 |
| BcoDI | GTCTC | 5 cut(s) | 181, 518, 531, 721, 1851 |
| BcuI | ACTAGT | 2 cut(s) | 556, 989 |
| BfaI | CTAG | 8 cut(s) | 557, 659, 860, 972, 990, 1722, 2054, 2237 |
| BfmI | CTRYAG | 2 cut(s) | 1924, 2771 |
| BisI | GCNGC | 5 cut(s) | 1146, 1913, 2321, 2453, 2722 |
| BlpI | GCTNAGC | 1 cut(s) | 197 |
| BlsI | GCNGC | 5 cut(s) | 1147, 1914, 2322, 2454, 2723 |
| BmcAI | AGTACT | 1 cut(s) | 2310 |
| Bme1390I | CCNGG | 2 cut(s) | 1608, 2819 |
| Bme18I | GGWCC | 2 cut(s) | 1618, 2462 |
| BmgBI | CACGTC | 1 cut(s) | 2857 |
| BmgT120I | GGNCC | 4 cut(s) | 1618, 2290, 2462, 2841 |
| BmiI | GGNNCC | 5 cut(s) | 43, 897, 925, 2291, 2463 |
| BmrFI | CCNGG | 2 cut(s) | 1608, 2819 |
| BmsI | GCATC | 4 cut(s) | 142, 1993, 2170, 2361 |
| BpiI | GAAGAC | 2 cut(s) | 1187, 2580 |
| Bpu10I | CCTNAGC | 1 cut(s) | 963 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 197 |
| BpuEI | CTTGAG | 1 cut(s) | 779 |
| BpuMI | CCSGG | 2 cut(s) | 1608, 2819 |
| Bsa29I | ATCGAT | 1 cut(s) | 1005 |
| BsaJI | CCNNGG | 2 cut(s) | 283, 1551 |
| BsaWI | WCCGGW | 2 cut(s) | 2039, 2622 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 61, 2230, 2804 |
| Bse118I | RCCGGY | 1 cut(s) | 2039 |
| Bse1I | ACTGG | 2 cut(s) | 355, 565 |
| Bse21I | CCTNAGG | 1 cut(s) | 928 |
| Bse3DI | GCAATG | 6 cut(s) | 384, 984, 1053, 1965, 2154, 2260 |
| BseCI | ATCGAT | 1 cut(s) | 1005 |
| BseDI | CCNNGG | 2 cut(s) | 283, 1551 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 61, 2230, 2804 |
| BseMI | GCAATG | 6 cut(s) | 384, 984, 1053, 1965, 2154, 2260 |
| BseMII | CTCAG | 6 cut(s) | 211, 377, 513, 732, 942, 977 |
| BseNI | ACTGG | 2 cut(s) | 355, 565 |
| BseRI | GAGGAG | 5 cut(s) | 175, 2566, 2569, 2572, 2849 |
| BseXI | GCAGC | 4 cut(s) | 1132, 2307, 2439, 2708 |
| BseYI | CCCAGC | 1 cut(s) | 389 |
| Bsh1236I | CGCG | 3 cut(s) | 149, 955, 1456 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1999 |
| BshFI | GGCC | 3 cut(s) | 354, 2292, 2843 |
| BshNI | GGYRCC | 1 cut(s) | 923 |
| BshTI | ACCGGT | 1 cut(s) | 2039 |
| BshVI | ATCGAT | 1 cut(s) | 1005 |
| BsiEI | CGRYCG | 1 cut(s) | 1999 |
| BsiHKAI | GWGCWC | 2 cut(s) | 147, 254 |
| BsiSI | CCGG | 4 cut(s) | 1607, 2040, 2623, 2818 |
| BslFI | GGGAC | 6 cut(s) | 767, 887, 2113, 2648, 2834, 2843 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 61, 2230, 2804 |
| BsmAI | GTCTC | 5 cut(s) | 181, 518, 531, 721, 1851 |
| BsmBI | CGTCTC | 2 cut(s) | 181, 531 |
| BsmFI | GGGAC | 6 cut(s) | 767, 887, 2113, 2648, 2834, 2843 |
| BsmI | GAATGC | 1 cut(s) | 1565 |
| BsnI | GGCC | 3 cut(s) | 354, 2292, 2843 |
| Bsp1286I | GDGCHC | 2 cut(s) | 147, 254 |
| Bsp1407I | TGTACA | 1 cut(s) | 730 |
| Bsp143I | GATC | 6 cut(s) | 895, 1333, 1996, 2233, 2394, 2781 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 197 |
| BspACI | CCGC | 6 cut(s) | 149, 740, 1171, 1456, 1574, 1912 |
| BspANI | GGCC | 3 cut(s) | 354, 2292, 2843 |
| BspCNI | CTCAG | 6 cut(s) | 210, 376, 514, 731, 941, 976 |
| BspDI | ATCGAT | 1 cut(s) | 1005 |
| BspFNI | CGCG | 3 cut(s) | 149, 955, 1456 |
| BspHI | TCATGA | 2 cut(s) | 379, 430 |
| BspLI | GGNNCC | 5 cut(s) | 43, 897, 925, 2291, 2463 |
| BspMAI | CTGCAG | 1 cut(s) | 1928 |
| BspPI | GGATC | 4 cut(s) | 890, 903, 2241, 2402 |
| BspT107I | GGYRCC | 1 cut(s) | 923 |
| BsrDI | GCAATG | 6 cut(s) | 384, 984, 1053, 1965, 2154, 2260 |
| BsrFI | RCCGGY | 1 cut(s) | 2039 |
| BsrGI | TGTACA | 1 cut(s) | 730 |
| BsrI | ACTGG | 2 cut(s) | 355, 565 |
| BssAI | RCCGGY | 1 cut(s) | 2039 |
| BssECI | CCNNGG | 2 cut(s) | 283, 1551 |
| BssMI | GATC | 6 cut(s) | 895, 1333, 1996, 2233, 2394, 2781 |
| BssSI | CACGAG | 1 cut(s) | 1646 |
| BssT1I | CCWWGG | 2 cut(s) | 283, 1551 |
| Bst2BI | CACGAG | 1 cut(s) | 1646 |
| Bst4CI | ACNGT | 6 cut(s) | 293, 918, 1423, 1679, 1880, 2163 |
| Bst6I | CTCTTC | 1 cut(s) | 1947 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1909 |
| BstAUI | TGTACA | 1 cut(s) | 730 |
| BstC8I | GCNNGC | 5 cut(s) | 147, 194, 1136, 2366, 2370 |
| BstFNI | CGCG | 3 cut(s) | 149, 955, 1456 |
| BstHHI | GCGC | 2 cut(s) | 1692, 2757 |
| BstKTI | GATC | 6 cut(s) | 898, 1336, 1999, 2236, 2397, 2784 |
| BstMAI | GTCTC | 5 cut(s) | 181, 518, 531, 721, 1851 |
| BstMBI | GATC | 6 cut(s) | 895, 1333, 1996, 2233, 2394, 2781 |
| BstMCI | CGRYCG | 1 cut(s) | 1999 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 137, 146, 189, 198, 659, 968, 1909 |
| BstNSI | RCATGY | 3 cut(s) | 62, 74, 2205 |
| BstSCI | CCNGG | 2 cut(s) | 1606, 2817 |
| BstSFI | CTRYAG | 2 cut(s) | 1924, 2771 |
| BstUI | CGCG | 3 cut(s) | 149, 955, 1456 |
| BstV1I | GCAGC | 4 cut(s) | 1132, 2307, 2439, 2708 |
| BstV2I | GAAGAC | 2 cut(s) | 1187, 2580 |
| BstX2I | RGATCY | 3 cut(s) | 895, 2233, 2394 |
| BstYI | RGATCY | 3 cut(s) | 895, 2233, 2394 |
| Bsu15I | ATCGAT | 1 cut(s) | 1005 |
| Bsu36I | CCTNAGG | 1 cut(s) | 928 |
| BsuRI | GGCC | 3 cut(s) | 354, 2292, 2843 |
| BsuTUI | ATCGAT | 1 cut(s) | 1005 |
| BtrI | CACGTC | 1 cut(s) | 2857 |
| BtsI | GCAGTG | 2 cut(s) | 1184, 1933 |
| BtsIMutI | CAGTG | 5 cut(s) | 252, 298, 923, 1184, 1933 |
| Cac8I | GCNNGC | 5 cut(s) | 147, 194, 1136, 2366, 2370 |
| CciI | TCATGA | 2 cut(s) | 379, 430 |
| CfoI | GCGC | 2 cut(s) | 1692, 2757 |
| Cfr10I | RCCGGY | 1 cut(s) | 2039 |
| Cfr13I | GGNCC | 4 cut(s) | 1618, 2290, 2462, 2841 |
| ClaI | ATCGAT | 1 cut(s) | 1005 |
| CseI | GACGC | 1 cut(s) | 198 |
| Csp6I | GTAC | 8 cut(s) | 302, 348, 731, 1118, 1653, 2269, 2309, 2736 |
| CspAI | ACCGGT | 1 cut(s) | 2039 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2242, 2277 |
| CviAII | CATG | 9 cut(s) | 59, 71, 380, 431, 1337, 1529, 1856, 2202, 2330 |
| CviQI | GTAC | 8 cut(s) | 302, 348, 731, 1118, 1653, 2269, 2309, 2736 |
| DpnI | GATC | 6 cut(s) | 897, 1335, 1998, 2235, 2396, 2783 |
| DpnII | GATC | 6 cut(s) | 895, 1333, 1996, 2233, 2394, 2781 |
| EaeI | YGGCCR | 1 cut(s) | 352 |
| Eam1104I | CTCTTC | 1 cut(s) | 1947 |
| EarI | CTCTTC | 1 cut(s) | 1947 |
| Eco130I | CCWWGG | 2 cut(s) | 283, 1551 |
| Eco32I | GATATC | 1 cut(s) | 1835 |
| Eco47I | GGWCC | 2 cut(s) | 1618, 2462 |
| Eco57I | CTGAAG | 2 cut(s) | 27, 1883 |
| Eco81I | CCTNAGG | 1 cut(s) | 928 |
| EcoRV | GATATC | 1 cut(s) | 1835 |
| EcoT14I | CCWWGG | 2 cut(s) | 283, 1551 |
| ErhI | CCWWGG | 2 cut(s) | 283, 1551 |
| Esp3I | CGTCTC | 2 cut(s) | 181, 531 |
| FaeI | CATG | 9 cut(s) | 62, 74, 383, 434, 1340, 1532, 1859, 2205, 2333 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 741, 773, 2133, 2165 |
| FaqI | GGGAC | 6 cut(s) | 767, 887, 2113, 2648, 2834, 2843 |
| FatI | CATG | 9 cut(s) | 58, 70, 379, 430, 1336, 1528, 1855, 2201, 2329 |
| FblI | GTMKAC | 1 cut(s) | 1920 |
| Fnu4HI | GCNGC | 5 cut(s) | 1146, 1913, 2321, 2453, 2722 |
| Fsp4HI | GCNGC | 5 cut(s) | 1146, 1913, 2321, 2453, 2722 |
| FspBI | CTAG | 8 cut(s) | 557, 659, 860, 972, 990, 1722, 2054, 2237 |
| FspI | TGCGCA | 2 cut(s) | 1691, 2756 |
| GlaI | GCGC | 2 cut(s) | 1691, 2756 |
| GluI | GCNGC | 5 cut(s) | 1146, 1913, 2321, 2453, 2722 |
| GsaI | CCCAGC | 1 cut(s) | 393 |
| HaeIII | GGCC | 3 cut(s) | 354, 2292, 2843 |
| HapII | CCGG | 4 cut(s) | 1607, 2040, 2623, 2818 |
| HgaI | GACGC | 1 cut(s) | 198 |
| HhaI | GCGC | 2 cut(s) | 1692, 2757 |
| Hin1II | CATG | 9 cut(s) | 62, 74, 383, 434, 1340, 1532, 1859, 2205, 2333 |
| Hin6I | GCGC | 2 cut(s) | 1690, 2755 |
| HinP1I | GCGC | 2 cut(s) | 1690, 2755 |
| HincII | GTYRAC | 2 cut(s) | 1921, 2037 |
| HindII | GTYRAC | 2 cut(s) | 1921, 2037 |
| HpaI | GTTAAC | 1 cut(s) | 2037 |
| HpaII | CCGG | 4 cut(s) | 1607, 2040, 2623, 2818 |
| HphI | GGTGA | 8 cut(s) | 40, 299, 1034, 1082, 1622, 1898, 2096, 2819 |
| Hpy166II | GTNNAC | 3 cut(s) | 1921, 1931, 2037 |
| Hpy188I | TCNGA | 8 cut(s) | 207, 366, 523, 721, 829, 2415, 2870, 2885 |
| Hpy8I | GTNNAC | 3 cut(s) | 1921, 1931, 2037 |
| Hpy99I | CGWCG | 1 cut(s) | 2485 |
| HpyCH4III | ACNGT | 6 cut(s) | 293, 918, 1423, 1679, 1880, 2163 |
| HpyCH4IV | ACGT | 5 cut(s) | 1300, 1907, 2102, 2738, 2856 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 137, 146, 189, 198, 659, 968, 1909 |
| HpySE526I | ACGT | 5 cut(s) | 1300, 1907, 2102, 2738, 2856 |
| Hsp92II | CATG | 9 cut(s) | 62, 74, 383, 434, 1340, 1532, 1859, 2205, 2333 |
| HspAI | GCGC | 2 cut(s) | 1690, 2755 |
| KspAI | GTTAAC | 1 cut(s) | 2037 |
| Kzo9I | GATC | 6 cut(s) | 895, 1333, 1996, 2233, 2394, 2781 |
| LmnI | GCTCC | 1 cut(s) | 249 |
| Lsp1109I | GCAGC | 4 cut(s) | 1132, 2307, 2439, 2708 |
| LweI | GCATC | 4 cut(s) | 142, 1993, 2170, 2361 |
| MaeI | CTAG | 8 cut(s) | 557, 659, 860, 972, 990, 1722, 2054, 2237 |
| MaeII | ACGT | 5 cut(s) | 1300, 1907, 2102, 2738, 2856 |
| MaeIII | GTNAC | 6 cut(s) | 287, 992, 1271, 1374, 1450, 1602 |
| MalI | GATC | 6 cut(s) | 897, 1335, 1998, 2235, 2396, 2783 |
| MboI | GATC | 6 cut(s) | 895, 1333, 1996, 2233, 2394, 2781 |
| MflI | RGATCY | 3 cut(s) | 895, 2233, 2394 |
| MhlI | GDGCHC | 2 cut(s) | 147, 254 |
| MlsI | TGGCCA | 1 cut(s) | 354 |
| MluNI | TGGCCA | 1 cut(s) | 354 |
| MlyI | GAGTC | 6 cut(s) | 833, 869, 1091, 2155, 2177, 2670 |
| MmeI | TCCRAC | 3 cut(s) | 79, 1279, 2145 |
| Mox20I | TGGCCA | 1 cut(s) | 354 |
| MroXI | GAANNNNTTC | 1 cut(s) | 132 |
| MscI | TGGCCA | 1 cut(s) | 354 |
| MseI | TTAA | 9 cut(s) | 495, 768, 1347, 1500, 1547, 1634, 1979, 2036, 2715 |
| MslI | CAYNNNNRTG | 4 cut(s) | 916, 1989, 2070, 2870 |
| Msp20I | TGGCCA | 1 cut(s) | 354 |
| MspA1I | CMGCKG | 1 cut(s) | 2368 |
| MspI | CCGG | 4 cut(s) | 1607, 2040, 2623, 2818 |
| MspR9I | CCNGG | 2 cut(s) | 1608, 2819 |
| Mva1269I | GAATGC | 1 cut(s) | 1565 |
| MvnI | CGCG | 3 cut(s) | 149, 955, 1456 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 137, 146, 189, 198, 659, 968, 1909 |
| NciI | CCSGG | 2 cut(s) | 1608, 2819 |
| NdeII | GATC | 6 cut(s) | 895, 1333, 1996, 2233, 2394, 2781 |
| NlaIII | CATG | 9 cut(s) | 62, 74, 383, 434, 1340, 1532, 1859, 2205, 2333 |
| NlaIV | GGNNCC | 5 cut(s) | 43, 897, 925, 2291, 2463 |
| NmuCI | GTSAC | 3 cut(s) | 287, 992, 1374 |
| NsbI | TGCGCA | 2 cut(s) | 1691, 2756 |
| NspI | RCATGY | 3 cut(s) | 62, 74, 2205 |
| PagI | TCATGA | 2 cut(s) | 379, 430 |
| PciI | ACATGT | 2 cut(s) | 58, 70 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 228, 2005 |
| PctI | GAATGC | 1 cut(s) | 1565 |
| PdmI | GAANNNNTTC | 1 cut(s) | 132 |
| PfeI | GAWTC | 6 cut(s) | 427, 518, 1709, 2342, 2489, 2792 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 61 |
| PfoI | TCCNGGA | 1 cut(s) | 2817 |
| PinAI | ACCGGT | 1 cut(s) | 2039 |
| PkrI | GCNGC | 5 cut(s) | 1147, 1914, 2322, 2454, 2723 |
| Ple19I | CGATCG | 1 cut(s) | 1999 |
| PleI | GAGTC | 6 cut(s) | 832, 869, 1090, 2154, 2176, 2669 |
| PpsI | GAGTC | 6 cut(s) | 832, 869, 1090, 2154, 2176, 2669 |
| PscI | ACATGT | 2 cut(s) | 58, 70 |
| PshBI | ATTAAT | 1 cut(s) | 2715 |
| Psp1406I | AACGTT | 2 cut(s) | 1300, 1907 |
| PspFI | CCCAGC | 1 cut(s) | 389 |
| PspN4I | GGNNCC | 5 cut(s) | 43, 897, 925, 2291, 2463 |
| PspPI | GGNCC | 4 cut(s) | 1618, 2290, 2462, 2841 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 714, 746 |
| PstI | CTGCAG | 1 cut(s) | 1928 |
| PsuI | RGATCY | 3 cut(s) | 895, 2233, 2394 |
| PvuI | CGATCG | 1 cut(s) | 1999 |
| PvuII | CAGCTG | 1 cut(s) | 2368 |
| RsaI | GTAC | 8 cut(s) | 303, 349, 732, 1119, 1654, 2270, 2310, 2737 |
| RsaNI | GTAC | 8 cut(s) | 302, 348, 731, 1118, 1653, 2269, 2309, 2736 |
| RseI | CAYNNNNRTG | 4 cut(s) | 916, 1989, 2070, 2870 |
| SalI | GTCGAC | 1 cut(s) | 1919 |
| SaqAI | TTAA | 9 cut(s) | 495, 768, 1347, 1500, 1547, 1634, 1979, 2036, 2715 |
| SatI | GCNGC | 5 cut(s) | 1146, 1913, 2321, 2453, 2722 |
| Sau3AI | GATC | 6 cut(s) | 895, 1333, 1996, 2233, 2394, 2781 |
| Sau96I | GGNCC | 4 cut(s) | 1618, 2290, 2462, 2841 |
| ScaI | AGTACT | 1 cut(s) | 2310 |
| SchI | GAGTC | 6 cut(s) | 833, 869, 1091, 2155, 2177, 2670 |
| ScrFI | CCNGG | 2 cut(s) | 1608, 2819 |
| SduI | GDGCHC | 2 cut(s) | 147, 254 |
| SfaNI | GCATC | 4 cut(s) | 142, 1993, 2170, 2361 |
| SfcI | CTRYAG | 2 cut(s) | 1924, 2771 |
| SinI | GGWCC | 2 cut(s) | 1618, 2462 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 916, 1989, 2070, 2870 |
| SmlI | CTYRAG | 1 cut(s) | 758 |
| SmoI | CTYRAG | 1 cut(s) | 758 |
| SpeI | ACTAGT | 2 cut(s) | 556, 989 |
| SsiI | CCGC | 6 cut(s) | 149, 740, 1171, 1456, 1574, 1912 |
| SspI | AATATT | 2 cut(s) | 1544, 2680 |
| SspMI | CTAG | 8 cut(s) | 557, 659, 860, 972, 990, 1722, 2054, 2237 |
| StyD4I | CCNGG | 2 cut(s) | 1606, 2817 |
| StyI | CCWWGG | 2 cut(s) | 283, 1551 |
| TaaI | ACNGT | 6 cut(s) | 293, 918, 1423, 1679, 1880, 2163 |
| TaiI | ACGT | 5 cut(s) | 1303, 1910, 2105, 2741, 2859 |
| TaqII | GACCGA | 1 cut(s) | 1026 |
| TatI | WGTACW | 4 cut(s) | 347, 730, 2268, 2308 |
| TauI | GCSGC | 1 cut(s) | 1915 |
| TfiI | GAWTC | 6 cut(s) | 427, 518, 1709, 2342, 2489, 2792 |
| Tru1I | TTAA | 9 cut(s) | 495, 768, 1347, 1500, 1547, 1634, 1979, 2036, 2715 |
| Tru9I | TTAA | 9 cut(s) | 495, 768, 1347, 1500, 1547, 1634, 1979, 2036, 2715 |
| TscAI | CASTG | 5 cut(s) | 259, 298, 923, 1191, 1933 |
| TseFI | GTSAC | 3 cut(s) | 287, 992, 1374 |
| TseI | GCWGC | 4 cut(s) | 1145, 2320, 2452, 2721 |
| Tsp45I | GTSAC | 3 cut(s) | 287, 992, 1374 |
| TspGWI | ACGGA | 3 cut(s) | 326, 1135, 1610 |
| TspRI | CASTG | 5 cut(s) | 259, 298, 923, 1191, 1933 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 61 |
| VpaK11BI | GGWCC | 2 cut(s) | 1618, 2462 |
| VspI | ATTAAT | 1 cut(s) | 2715 |
| XapI | RAATTY | 6 cut(s) | 452, 473, 787, 1940, 2498, 2879 |
| XbaI | TCTAGA | 1 cut(s) | 2236 |
| XceI | RCATGY | 3 cut(s) | 62, 74, 2205 |
| XmiI | GTMKAC | 1 cut(s) | 1920 |
| XmnI | GAANNNNTTC | 1 cut(s) | 132 |
| XspI | CTAG | 8 cut(s) | 557, 659, 860, 972, 990, 1722, 2054, 2237 |
| ZrmI | AGTACT | 1 cut(s) | 2310 |