RchiOBHm_Chr1g0369581

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
59366481 .. 59368538
2058 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ59381

Sequence Viewer

Length: 2058 bp
ATGGGGAAAACAACTCTTTGCCAACTAGTCTATAATGATGAAAAAGTGAAAACCCATTTTGATAAGAGAATATGGGTTTGTGTGTCTGACCCTTTTGACGAGATTAAAATTGCTAGAGCTATTGTCGAAGGCCTAGATAATTATAATATTTCAAAATCTTCAAACAGCTTGCAAATTTTGATGGAATGTATCGATACATTGATTCAGGGGAAAAAATTTCTCCTTGTCTTAGATGATGTGTGGAACCCAAGACATACTCAGTGGGAAGAATTAGTTAAACCTTTTTGTCATGGCGCTATGGGTAGTAGAGTACTAGTGACTACTCGAAATGAGGAAGTTGCTACTCTGATGAAAGCAACTACTCATGTCATACATATGAAGCAGTTGAGTGAAGAATTTTGTCTGTCATTGTTTTATTATAATGCAGACAGAGACATATGTAGTGAGTCTAAAATGTTTCTGGATGTTGGAGAAAAAATTGTGAAAAAGTGCGATGGCTTGCCTCTTGCTGCAAAGACATTAGGTAGCCTCATGCGCGACAAAAAAATACTTAGAGAGTGGGAAGATGTTTTAAATAGTAAGTTATGGGAGCTAGAAGATATTGAACAACAAGTTTTTCGACCACTATTACTTAGTTACAATGATTTGACCTCAGAAATCAGAAATTGTCTTTTGTATTGTGTTATCTTTCCAAAAGATTATGTGTATGATAAAGATAACTTAGTTGAGCTGTGGATGTCACAAAATTATTTGAATGTGGAAGAAAGCAAAGAAATAGAAAGACTTGGTCAAAAGTATTTTGACAAATTAGCCGTGCGATCTTTTTTCCAAGAAGTTGAGGTGGATGAATATGAGAAAACAAAGTGCAAAATACATGATATTATACATGATTTTATGTTGTACATGACGAAGAATGAATTTTTGACCGTGAATGTTGGGCAACCTTACCTCTCGAGTGTAAACGAACAGGTTCATCACTTGACTCTAATACGTTTCGATAGTTCCCGCATTTTGGATCATTTTCGCATGTGTGAAAATCTGCGTACCCTCGTAGTTTTGGATTACAGTCATAGTTCCGATTTTTCTATTGGCGAAAGAGAGATTGTGCAGTTGAAATACGTTAGGACATTAAGCTGCTTTAGTACTGGAACTAGGGCAATTCCAAAGGAGATAAGTGGATTGATTCATTTGAGGTATCTTGATTTATCGGGTCACTCGTGGTTGGGGGAATTACCGGACACCATGGGTAGCTTATACAATCTGCAAACCTTGCGACTTGTTGATTGCGAGGGCCTCAAGAAAGTAGATTTGGGAAGGCTAATTAACATGAGGCATCTTAGTGTCCGCGGCTGTGAAAAGCTAGAGCTAATGGGAATAGAGAGACTAACAAATCTGCAAACGTTAGATGAGTTTAATGTCCAAGAAGATTATGGCGGAAACGAGTTGGGACATCTGAGAAACTTGAACCAGCTTCAAGGACGTCTTACTATTAAAATTCATGGACCGAAAATGGGAGAGATAGATGCGGCGATCATGGTGAATAAGGAGCAACTCCGTCACTTGGTCCTAGTTGGCGGTTGGCGACGGGATTTGATGGCCCTACAACCACCTCCTGGTTTGGAATCTTTGAGGGTTTATCATTATAACGGCAAGCCCTTGTCGACCGATTGGTGGTCGTCTTTACACAGCTTGAGAGTGCTTACACTTTCAGAGTGTCTCTTTTTGCCTTCTTTAGGAAATCTGTCATCCCTTGAATCATTGAATATTAGGAGAGTTGGTGTGAGAAAGGTAGGAGTTGAGTTTTTGGGAATACATGATCATGATCAATCAGACACCAACTGGAGGAGGCAAACGTCATTCCCGAAATTGAAGCAGCTCACCTTCGACGACATGCCTTACTGGAAAGAGTGGGAAGGAGTGAACGAGGATTCTGAGAAGATGGCAGTAATAATGCCATGCCTTTCCGAGTTGACAATTTCTGGGTGCGATTTGCTAGAAGCACTGCCGGAATTCCTGTGGAAGACGCCACTTCAGAAACTGCACATCAGCGGATCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

685

Amino Acids

79.39

Weight (kDa)

5.81

Isoelectric Point (pI)

45.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 1 - 139 4.1e-29 NB-ARC domain
WHD_DRP PF23559 229 - 298 3.9e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 389 - 632 1.5e-20 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 482 - 591 5.5e-13 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 144, 420, 1644
AatII GACGTC 1 cut(s) 1483
AccB7I CCANNNNNTGG 1 cut(s) 1613
AccI GTMKAC 1 cut(s) 1661
AccII CGCG 2 cut(s) 537, 1347
AciI CCGC 7 cut(s) 1006, 1345, 1347, 1434, 1526, 1575, 2049
AclI AACGTT 1 cut(s) 1400
AclWI GGATC 1 cut(s) 1023
AcsI RAATTY 6 cut(s) 174, 215, 395, 917, 1494, 2009
AcuI CTGAAG 1 cut(s) 2015
AcyI GRCGYC 2 cut(s) 1480, 2024
AfaI GTAC 4 cut(s) 312, 902, 1045, 1144
AfiI CCNNNNNNNGG 7 cut(s) 1012, 1511, 1561, 1613, 1671, 1733, 1842
AhlI ACTAGT 2 cut(s) 25, 313
AjnI CCWGG 1 cut(s) 1612
AjuI GAANNNNNNNTTGG 2 cut(s) 1292, 1324
Alw26I GTCTC 3 cut(s) 426, 1375, 1721
AlwI GGATC 1 cut(s) 1023
AlwNI CAGNNNCTG 1 cut(s) 2038
Ama87I CYCGRG 1 cut(s) 952
AoxI GGCC 3 cut(s) 130, 1291, 1596
ApeKI GCWGC 3 cut(s) 509, 1134, 1873
ApoI RAATTY 6 cut(s) 174, 215, 395, 917, 1494, 2009
Asp700I GAANNNNTTC 1 cut(s) 969
AspLEI GCGC 2 cut(s) 296, 537
AspS9I GGNCC 4 cut(s) 1291, 1502, 1564, 1597
AsuHPI GGTGA 2 cut(s) 1549, 1870
AvaI CYCGRG 1 cut(s) 952
AvaII GGWCC 2 cut(s) 1502, 1564
BauI CACGAG 1 cut(s) 1216
BbsI GAAGAC 1 cut(s) 2027
BbvI GCAGC 3 cut(s) 496, 1121, 1885
BccI CCATC 4 cut(s) 175, 488, 1588, 1933
BceAI ACGGC 2 cut(s) 797, 1663
BciT130I CCWGG 1 cut(s) 1614
BclI TGATCA 2 cut(s) 1816, 1822
BcoDI GTCTC 3 cut(s) 426, 1375, 1721
BcuI ACTAGT 2 cut(s) 25, 313
BfaI CTAG 9 cut(s) 26, 114, 134, 314, 593, 1152, 1361, 1568, 1994
BfoI RGCGCY 1 cut(s) 297
BisI GCNGC 5 cut(s) 510, 1135, 1348, 1527, 1874
BlsI GCNGC 5 cut(s) 511, 1136, 1349, 1528, 1875
BmcAI AGTACT 2 cut(s) 312, 1144
Bme1390I CCNGG 1 cut(s) 1614
Bme18I GGWCC 2 cut(s) 1502, 1564
BmeT110I CYCGRG 1 cut(s) 952
BmgT120I GGNCC 4 cut(s) 1291, 1502, 1564, 1597
BmiI GGNNCC 1 cut(s) 245
BmrFI CCNGG 1 cut(s) 1614
BmsI GCATC 2 cut(s) 1342, 1513
BpiI GAAGAC 1 cut(s) 2027
BpmI CTGGAG 1 cut(s) 1861
BpuEI CTTGAG 2 cut(s) 1280, 1711
Bsa29I ATCGAT 1 cut(s) 192
BsaBI GATNNNNATC 1 cut(s) 1821
BsaHI GRCGYC 2 cut(s) 1480, 2024
BsaJI CCNNGG 2 cut(s) 1242, 1345
BsaWI WCCGGW 1 cut(s) 1234
BsaXI ACNNNNNCTCC 2 cut(s) 1762, 1792
Bsc4I CCNNNNNNNGG 7 cut(s) 1012, 1511, 1561, 1613, 1671, 1733, 1842
Bse1I ACTGG 3 cut(s) 1150, 1844, 1904
Bse8I GATNNNNATC 1 cut(s) 1821
BseBI CCWGG 1 cut(s) 1614
BseCI ATCGAT 1 cut(s) 192
BseDI CCNNGG 2 cut(s) 1242, 1345
BseGI GGATG 4 cut(s) 469, 741, 850, 1745
BseJI GATNNNNATC 1 cut(s) 1821
BseLI CCNNNNNNNGG 7 cut(s) 1012, 1511, 1561, 1613, 1671, 1733, 1842
BseMII CTCAG 4 cut(s) 272, 666, 1445, 1923
BseNI ACTGG 3 cut(s) 1150, 1844, 1904
BseRI GAGGAG 1 cut(s) 1858
BseXI GCAGC 3 cut(s) 496, 1121, 1885
BsgI GTGCAG 2 cut(s) 1127, 2024
Bsh1236I CGCG 2 cut(s) 537, 1347
Bsh1285I CGRYCG 1 cut(s) 1665
BshFI GGCC 3 cut(s) 132, 1293, 1598
BshVI ATCGAT 1 cut(s) 192
BsiEI CGRYCG 1 cut(s) 1665
BsiHKCI CYCGRG 1 cut(s) 952
BsiSI CCGG 2 cut(s) 1235, 2006
BslFI GGGAC 1 cut(s) 1461
BslI CCNNNNNNNGG 7 cut(s) 1012, 1511, 1561, 1613, 1671, 1733, 1842
BsmAI GTCTC 3 cut(s) 426, 1375, 1721
BsmFI GGGAC 1 cut(s) 1461
BsnI GGCC 3 cut(s) 132, 1293, 1598
BsoBI CYCGRG 1 cut(s) 952
Bsp1407I TGTACA 1 cut(s) 900
Bsp143I GATC 6 cut(s) 818, 1015, 1530, 1816, 1822, 2051
Bsp19I CCATGG 1 cut(s) 1242
BspACI CCGC 7 cut(s) 1006, 1345, 1347, 1434, 1526, 1575, 2049
BspANI GGCC 3 cut(s) 132, 1293, 1598
BspCNI CTCAG 4 cut(s) 271, 665, 1446, 1924
BspDI ATCGAT 1 cut(s) 192
BspFNI CGCG 2 cut(s) 537, 1347
BspHI TCATGA 1 cut(s) 1819
BspLI GGNNCC 1 cut(s) 245
BspPI GGATC 1 cut(s) 1023
BsrGI TGTACA 1 cut(s) 900
BsrI ACTGG 3 cut(s) 1150, 1844, 1904
BssECI CCNNGG 2 cut(s) 1242, 1345
BssMI GATC 6 cut(s) 818, 1015, 1530, 1816, 1822, 2051
BssNI GRCGYC 2 cut(s) 1480, 2024
BssSI CACGAG 1 cut(s) 1216
BssT1I CCWWGG 1 cut(s) 1242
Bst2BI CACGAG 1 cut(s) 1216
Bst2UI CCWGG 1 cut(s) 1614
Bst4CI ACNGT 2 cut(s) 928, 1067
BstACI GRCGYC 2 cut(s) 1480, 2024
BstAPI GCANNNNNTGC 1 cut(s) 1270
BstAUI TGTACA 1 cut(s) 900
BstC8I GCNNGC 3 cut(s) 170, 500, 1652
BstDEI CTNAG 9 cut(s) 229, 258, 551, 632, 652, 721, 1337, 1454, 1932
BstDSI CCRYGG 2 cut(s) 1242, 1345
BstENI CCTNNNNNAGG 1 cut(s) 1731
BstF5I GGATG 4 cut(s) 469, 741, 850, 1745
BstFNI CGCG 2 cut(s) 537, 1347
BstH2I RGCGCY 1 cut(s) 297
BstHHI GCGC 2 cut(s) 296, 537
BstKTI GATC 6 cut(s) 821, 1018, 1533, 1819, 1825, 2054
BstMAI GTCTC 3 cut(s) 426, 1375, 1721
BstMBI GATC 6 cut(s) 818, 1015, 1530, 1816, 1822, 2051
BstMCI CGRYCG 1 cut(s) 1665
BstMWI GCNNNNNNNGC 2 cut(s) 534, 1270
BstNI CCWGG 1 cut(s) 1614
BstNSI RCATGY 2 cut(s) 1030, 1894
BstSCI CCNGG 1 cut(s) 1612
BstUI CGCG 2 cut(s) 537, 1347
BstV1I GCAGC 3 cut(s) 496, 1121, 1885
BstV2I GAAGAC 1 cut(s) 2027
BstX2I RGATCY 1 cut(s) 2051
BstYI RGATCY 1 cut(s) 2051
Bsu15I ATCGAT 1 cut(s) 192
BsuRI GGCC 3 cut(s) 132, 1293, 1598
BsuTUI ATCGAT 1 cut(s) 192
BtgI CCRYGG 2 cut(s) 1242, 1345
BtgZI GCGATG 1 cut(s) 507
BtsCI GGATG 4 cut(s) 469, 741, 850, 1745
BtsI GCAGTG 1 cut(s) 2000
BtsIMutI CAGTG 2 cut(s) 266, 2000
Cac8I GCNNGC 3 cut(s) 170, 500, 1652
CaiI CAGNNNCTG 1 cut(s) 2038
CciI TCATGA 1 cut(s) 1819
CfoI GCGC 2 cut(s) 296, 537
Cfr13I GGNCC 4 cut(s) 1291, 1502, 1564, 1597
Cfr42I CCGCGG 1 cut(s) 1348
ClaI ATCGAT 1 cut(s) 192
CseI GACGC 1 cut(s) 2032
Csp6I GTAC 4 cut(s) 311, 901, 1044, 1143
CviQI GTAC 4 cut(s) 311, 901, 1044, 1143
DdeI CTNAG 9 cut(s) 229, 258, 551, 632, 652, 721, 1337, 1454, 1932
DpnI GATC 6 cut(s) 820, 1017, 1532, 1818, 1824, 2053
DpnII GATC 6 cut(s) 818, 1015, 1530, 1816, 1822, 2051
DraI TTTAAA 1 cut(s) 573
EciI GGCGGA 1 cut(s) 1449
Eco130I CCWWGG 1 cut(s) 1242
Eco147I AGGCCT 1 cut(s) 132
Eco47I GGWCC 2 cut(s) 1502, 1564
Eco57I CTGAAG 1 cut(s) 2015
Eco88I CYCGRG 1 cut(s) 952
EcoNI CCTNNNNNAGG 1 cut(s) 1731
EcoO109I RGGNCCY 1 cut(s) 1291
EcoRI GAATTC 1 cut(s) 2009
EcoRII CCWGG 1 cut(s) 1612
EcoT14I CCWWGG 1 cut(s) 1242
ErhI CCWWGG 1 cut(s) 1242
FalI AAGNNNNNCTT 2 cut(s) 1467, 1499
FaqI GGGAC 1 cut(s) 1461
FauI CCCGC 1 cut(s) 1013
FauNDI CATATG 2 cut(s) 375, 437
FbaI TGATCA 2 cut(s) 1816, 1822
FblI GTMKAC 1 cut(s) 1661
Fnu4HI GCNGC 5 cut(s) 510, 1135, 1348, 1527, 1874
FokI GGATG 4 cut(s) 476, 748, 857, 1732
Fsp4HI GCNGC 5 cut(s) 510, 1135, 1348, 1527, 1874
FspBI CTAG 9 cut(s) 26, 114, 134, 314, 593, 1152, 1361, 1568, 1994
GlaI GCGC 2 cut(s) 295, 536
GluI GCNGC 5 cut(s) 510, 1135, 1348, 1527, 1874
GsuI CTGGAG 1 cut(s) 1861
HaeII RGCGCY 1 cut(s) 297
HaeIII GGCC 3 cut(s) 132, 1293, 1598
HapII CCGG 2 cut(s) 1235, 2006
HgaI GACGC 1 cut(s) 2032
HhaI GCGC 2 cut(s) 296, 537
Hin1I GRCGYC 2 cut(s) 1480, 2024
Hin6I GCGC 2 cut(s) 294, 535
HinP1I GCGC 2 cut(s) 294, 535
HincII GTYRAC 2 cut(s) 1662, 1971
HindII GTYRAC 2 cut(s) 1662, 1971
HinfI GANTC 7 cut(s) 202, 446, 982, 1183, 1622, 1754, 1928
HpaII CCGG 2 cut(s) 1235, 2006
HphI GGTGA 2 cut(s) 1549, 1870
Hpy166II GTNNAC 4 cut(s) 961, 1662, 1921, 1971
Hpy188III TCNNGA 6 cut(s) 461, 952, 1199, 1297, 1820, 1861
Hpy8I GTNNAC 4 cut(s) 961, 1662, 1921, 1971
Hpy99I CGWCG 2 cut(s) 1587, 1889
HpyAV CCTTC 5 cut(s) 122, 1308, 1737, 1891, 1907
HpyCH4III ACNGT 2 cut(s) 928, 1067
HpyCH4IV ACGT 5 cut(s) 991, 1119, 1400, 1480, 1853
HpyCH4V TGCA 8 cut(s) 172, 425, 512, 867, 1108, 1264, 1396, 2041
HpyF10VI GCNNNNNNNGC 2 cut(s) 534, 1270
HpyF3I CTNAG 9 cut(s) 229, 258, 551, 632, 652, 721, 1337, 1454, 1932
HpySE526I ACGT 5 cut(s) 991, 1119, 1400, 1480, 1853
Hsp92I GRCGYC 2 cut(s) 1480, 2024
HspAI GCGC 2 cut(s) 294, 535
Ksp22I TGATCA 2 cut(s) 1816, 1822
KspI CCGCGG 1 cut(s) 1348
Kzo9I GATC 6 cut(s) 818, 1015, 1530, 1816, 1822, 2051
LmnI GCTCC 2 cut(s) 589, 1546
Lsp1109I GCAGC 3 cut(s) 496, 1121, 1885
LweI GCATC 2 cut(s) 1342, 1513
MaeI CTAG 9 cut(s) 26, 114, 134, 314, 593, 1152, 1361, 1568, 1994
MaeII ACGT 5 cut(s) 991, 1119, 1400, 1480, 1853
MaeIII GTNAC 5 cut(s) 316, 635, 738, 1211, 1556
MalI GATC 6 cut(s) 820, 1017, 1532, 1818, 1824, 2053
MboI GATC 6 cut(s) 818, 1015, 1530, 1816, 1822, 2051
MflI RGATCY 1 cut(s) 2051
MlyI GAGTC 2 cut(s) 455, 976
MmeI TCCRAC 1 cut(s) 448
MroXI GAANNNNTTC 1 cut(s) 969
MseI TTAA 8 cut(s) 105, 276, 572, 1130, 1323, 1413, 1491, 2056
MslI CAYNNNNRTG 3 cut(s) 374, 1338, 1818
MspA1I CMGCKG 2 cut(s) 1347, 2049
MspI CCGG 2 cut(s) 1235, 2006
MspR9I CCNGG 1 cut(s) 1614
MvaI CCWGG 1 cut(s) 1614
MvnI CGCG 2 cut(s) 537, 1347
MwoI GCNNNNNNNGC 2 cut(s) 534, 1270
NcoI CCATGG 1 cut(s) 1242
NdeI CATATG 2 cut(s) 375, 437
NdeII GATC 6 cut(s) 818, 1015, 1530, 1816, 1822, 2051
NlaIV GGNNCC 1 cut(s) 245
NmuCI GTSAC 4 cut(s) 316, 738, 1211, 1556
NspI RCATGY 2 cut(s) 1030, 1894
PaeR7I CTCGAG 1 cut(s) 952
PagI TCATGA 1 cut(s) 1819
PceI AGGCCT 1 cut(s) 132
PcsI WCGNNNNNNNCGW 2 cut(s) 1214, 1859
PdmI GAANNNNTTC 1 cut(s) 969
PfeI GAWTC 5 cut(s) 202, 1183, 1622, 1754, 1928
PflFI GACNNNGTC 1 cut(s) 786
PflMI CCANNNNNTGG 1 cut(s) 1613
PkrI GCNGC 5 cut(s) 511, 1136, 1349, 1528, 1875
PleI GAGTC 2 cut(s) 454, 976
PpsI GAGTC 2 cut(s) 454, 976
PsiI TTATAA 3 cut(s) 144, 420, 1644
Psp1406I AACGTT 1 cut(s) 1400
Psp6I CCWGG 1 cut(s) 1612
PspGI CCWGG 1 cut(s) 1612
PspN4I GGNNCC 1 cut(s) 245
PspPI GGNCC 4 cut(s) 1291, 1502, 1564, 1597
PstNI CAGNNNCTG 1 cut(s) 2038
PsuI RGATCY 1 cut(s) 2051
PsyI GACNNNGTC 1 cut(s) 786
RsaI GTAC 4 cut(s) 312, 902, 1045, 1144
RsaNI GTAC 4 cut(s) 311, 901, 1044, 1143
RseI CAYNNNNRTG 3 cut(s) 374, 1338, 1818
SacII CCGCGG 1 cut(s) 1348
SalI GTCGAC 1 cut(s) 1660
SaqAI TTAA 8 cut(s) 105, 276, 572, 1130, 1323, 1413, 1491, 2056
SatI GCNGC 5 cut(s) 510, 1135, 1348, 1527, 1874
Sau3AI GATC 6 cut(s) 818, 1015, 1530, 1816, 1822, 2051
Sau96I GGNCC 4 cut(s) 1291, 1502, 1564, 1597
ScaI AGTACT 2 cut(s) 312, 1144
SchI GAGTC 2 cut(s) 455, 976
ScrFI CCNGG 1 cut(s) 1614
SfaNI GCATC 2 cut(s) 1342, 1513
Sfr274I CTCGAG 1 cut(s) 952
Sfr303I CCGCGG 1 cut(s) 1348
SgrBI CCGCGG 1 cut(s) 1348
SinI GGWCC 2 cut(s) 1502, 1564
SlaI CTCGAG 1 cut(s) 952
SmiMI CAYNNNNRTG 3 cut(s) 374, 1338, 1818
SmlI CTYRAG 3 cut(s) 952, 1295, 1690
SmoI CTYRAG 3 cut(s) 952, 1295, 1690
SpeI ACTAGT 2 cut(s) 25, 313
SseBI AGGCCT 1 cut(s) 132
SsiI CCGC 7 cut(s) 1006, 1345, 1347, 1434, 1526, 1575, 2049
SspI AATATT 2 cut(s) 148, 1765
SspMI CTAG 9 cut(s) 26, 114, 134, 314, 593, 1152, 1361, 1568, 1994
StuI AGGCCT 1 cut(s) 132
StyD4I CCNGG 1 cut(s) 1612
StyI CCWWGG 1 cut(s) 1242
TaaI ACNGT 2 cut(s) 928, 1067
TaiI ACGT 5 cut(s) 994, 1122, 1403, 1483, 1856
TaqI TCGA 8 cut(s) 126, 192, 325, 619, 953, 996, 1661, 1884
TaqII GACCGA 2 cut(s) 1519, 1679
TatI WGTACW 3 cut(s) 310, 900, 1142
TauI GCSGC 2 cut(s) 1350, 1529
TfiI GAWTC 5 cut(s) 202, 1183, 1622, 1754, 1928
Tru1I TTAA 8 cut(s) 105, 276, 572, 1130, 1323, 1413, 1491, 2056
Tru9I TTAA 8 cut(s) 105, 276, 572, 1130, 1323, 1413, 1491, 2056
TscAI CASTG 2 cut(s) 266, 2007
TseFI GTSAC 4 cut(s) 316, 738, 1211, 1556
TseI GCWGC 3 cut(s) 509, 1134, 1873
Tsp45I GTSAC 4 cut(s) 316, 738, 1211, 1556
TspDTI ATGAA 8 cut(s) 54, 365, 392, 861, 930, 962, 1175, 1487
TspGWI ACGGA 1 cut(s) 1544
TspRI CASTG 2 cut(s) 266, 2007
Tth111I GACNNNGTC 1 cut(s) 786
Van91I CCANNNNNTGG 1 cut(s) 1613
VpaK11BI GGWCC 2 cut(s) 1502, 1564
XagI CCTNNNNNAGG 1 cut(s) 1731
XapI RAATTY 6 cut(s) 174, 215, 395, 917, 1494, 2009
XceI RCATGY 2 cut(s) 1030, 1894
XcmI CCANNNNNNNNNTGG 1 cut(s) 1427
XhoI CTCGAG 1 cut(s) 952
XmiI GTMKAC 1 cut(s) 1661
XmnI GAANNNNTTC 1 cut(s) 969
XspI CTAG 9 cut(s) 26, 114, 134, 314, 593, 1152, 1361, 1568, 1994
ZraI GACGTC 1 cut(s) 1481
ZrmI AGTACT 2 cut(s) 312, 1144
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.