Rh2CG352800

disease resistance protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
47827026 .. 47830751
3726 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG352800.1

Sequence Viewer

Length: 3276 bp
ATGGCTGAAGCTCTCGTTTCCAACCTATTAGCAAAGCTGGCTTTCATCTCTTTTACACAGATGGAACAAGAGGTGAGACTGATCGTGGGCGTTGACAAAGAAGTTAAAAATCTGACCCTCCATCTCGAAGCTCTTCAAGCTGTGCTCCTGAATGCAGAGGAGAGACAAATCAAGGAGCCGGATGTCCGGAGTTGGCTGAACAACCTCAAAGACGTGTCCTTTGACATAACCGACGTATTGGACGAGTGGAACACAGAGATTCTCAAACACCGAATTGAGAAGCAAGAAAAGCATGGTGAGGAAGCTGTAGTTGCTCAAAGGAAGGTACGTTTCTTCATTTCATGTCCTAGCTGTCCCTGCAATTGTTTTGGTCAAGTTGGTAGTGTAAGTGTGCGTCATGACATTGCTAAGAAGATAAAAGAAATGAATGAAAGATTAACTTTGATAAGTAGTATAAGACAGAATTATCGTTTTGAGAGAACAATAAGAGGCAATGAACAACTTGAACATCCCAAAACGTCTTCTTTTGTTGATATATCTAGAATAATTGGTAGAGAAGATGAAAAAAATAATTTAGTTAGCAAATTATTACCAAGCCAGAGTAGTCAAGAAGGGAGGAGTCATCCTGTCGTCCTTATTGTAGGGATGGGAGGAATGGGCAAGACTGCTCTTGCCCAATTGATCTATAACAATGAAAACATTAAAACTCATTTTGAGAAGAGAATTTGGGTTTGTGTGTCTGATCCTTTTGAAGAAATTAAGATTGCCAAAGCCATCATTGAGGCTCTCAATATATACGACAGCCGAGTTAATTCAAATGAGTTACAGACTTTATTGCAGTGTGTATCTGAATGTATTGAGCATAAGAGGTTTCTTCTTGTTTTAGATGATGTGTGGAACCTAAACAATACTAAGTGGGAACAATTAAAGGAAGCTTTACAGAATGGTGCTTCCGGTAGTAGAATTTTAGTGACCACACGTAAAGAAATAGTCTCAATTACAATGCAAGTAACTACCGATCATGTGATCTATCTGAACAAGTTGAGTGATGAAGATTGTTTGTTATTGTTTAATCAAACTGCATTTTTAGACGACAACGAAACAGACTTTAAATTGTTTGCAGATATTGGAAAGGAGATTGCAAAAAAGTGTCATGGTTTGCCTCTTGCTGCGAAAGCTTTAGGTAGTCTTATGCAGTATAAGAAAACAAGAACTGAATGGCAAAATGTTTTAGATAGTAAGATATGGAATGTAGAGGAGGTTGAACAAGTTTTCCAATCATTGTTACTAAGCTTTTATGATTTGAATCCAGCGGTCAAAACTTGTCTTTTATACTGTGCTACTTTTCAAAAAGAATATGAGTTTGACAAAAATATTTTGATTGAGTTGTGGATGTCACAAGAATATCTTAGTTTAAACCAAGATAAAGAAACAATAATAGGTCAGAATTATTTCAATAGTTTAGTAATGAGATCTTTCTTTCAAGATTTTAAAAAAGATAATGAGGGGAATATTACAAAGTGTAAAATGCATAATATTGTGCATGATTTCGTACAGTTTTTCACAGAAAATGAATACTTTATCATGGAGGCTGACAATGCTAATGAGATAAATATCGCACTAGCTAATAAGGTTCGACATTTGACATTGATGTTTTCCCCCGATGGTTCGTTTCCTTTTTCAATTTACCATTTTAAGAGATTGAGTACTCTCATAGCTTCTTTTTTAAAAATTACTACAATAAACTCAAATTTATTTTTTGAACTGAGATGTCTTAGGACATTAGATTTGAGTCATAACGACATTAAAGAACTTCCACAACAGATTGGCGAACTAAAACTTTTGCGTCATCTTGACTTGTCTTACAATTTTGATTTGGAAGAATTGCCCAATACTGTGGGTGATTTATGTAATCTGCAAACTCTTCGAATCAATAACTGCTGGAAGCTTGAAAAACTACCTGACACTGTGAGAAAATTGATCAACTTAAAGCATCTTCATATTGAGGAATCCAATAAAGTAAAGTTACCAAAAGACATTGGAAAATTGACAAGTCTGCAAACACTACATGGGTTTACTGTCCAGCATTTCAACTTCGATCACTATAAAATATTCACCTTAGAAGATCTGGAGAAGTTGGACCAACTTCAGGGTAGTCTACGCATAAGTGATTTAGAAGGGGATGCAGATATGGCTGAAAAGGCGCAATTGGTGAAGAAGAAACACCTACTTCATTTGTCTTTAGAATTTGGGGTTGCGGATAGTAAACACCAGGAACTATTGCTGAATGCGTTGCAACCACATACCAATTTAGAAGTATTAATGATCCAAGGTTACCGGGGAATGGTACATCCAAATTGGATGATGTCTTTACACAATTTGAGAAGCCTTACTCTTAAAGGCAACGAAAATTGCGAGTTTTTGCCTCCTCTGGGGAAATTGCCATCCCTTGAAGTTTTGAGAATATCATGGTTGGAAAGGGTGAAAAAGCTTGGAGTTGAGTTCTTGGGAATAGAAGAATTACCAAACAGGCAAACATCATCCATTACCATTGGCAATGCCGTTACTTTCCCGAAATTGAAACAACTCGAGCTGCATTCACTAGATAGCTTGGAAGAGTGGGAAGGAGTCACAGCTGGGTGGAGCGAAGAAGAAGATGATTCAGAACTTACAATAATGCCATCTCTTTCTTCCTTACAAATTGGGTACTGCAATAAGCTGAAAAAACTGCCGGACTTGGTGTGGAAGACACCGCTGCAGAGACTGAGCATTAAATTTTGTTCAATACTCACAGGAACAGGTAGACAGTGGGCCGAGATGTCTCACATCCCAAACATCGAAATCAATAATGTGTTTGTACAGAAAGGAGGAGTTCAGCTTGTGTCGGCAACTGACGAGGACGATGAACACGATGATGAGAGCGAGATCTGCCGTACTGATTCACTTTACTGGATTTCAACAATGCCTGAGGATATATCGACACGGCAGGTGTCTGAGGAGAGATTGACGGGGAAGGTGAAGTGGTTCAACGACTCTAAAGGTTTCGGCTTCATCACCCCGGACGACGACGACAGAGAAGATTTGTTCGTTCACTTCTCGGCGATCAAATGCGACGGCTACCGCACTATCATGGATGGCCTGGCCGTCGAATTCCAAATCGGGGTAGGCCATCGCGGCTCGACCCAGGCCATCAACGTCACTGGCCTCAATGGCGCTGCTATGCAGGGGCAACGGAAGGAGAGAGTGGAACGGTTCGGTTGGACGAGGCGGCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1091

Amino Acids

125.42

Weight (kDa)

5.68

Isoelectric Point (pI)

42.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 96 8.9e-20 Rx N-terminal domain
AAA_16 PF13191 182 - 324 1.5e-06 AAA ATPase domain
NB-ARC PF00931 186 - 363 5.1e-36 NB-ARC domain
WHD_DRP PF23559 449 - 518 1.3e-19 Disease resistance protein Winged helix domain
LRR_8 PF13855 567 - 623 9.1e-07 Leucine rich repeat
LRR_14 PF23598 608 - 901 2e-26 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 707 - 823 1.7e-28 R13L1/DRL21 LRRs
CSD PF00313 1003 - 1068 4.9e-22 'Cold-shock' DNA-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2977
Acc36I ACCTGC 1 cut(s) 2977
AccI GTMKAC 2 cut(s) 2158, 2803
AccII CGCG 1 cut(s) 3174
AccIII TCCGGA 1 cut(s) 186
AciI CCGC 7 cut(s) 1313, 2258, 2753, 3121, 3174, 3268, 3271
AclWI GGATC 2 cut(s) 737, 2320
AcoI YGGCCR 1 cut(s) 3141
AcsI RAATTY 6 cut(s) 723, 963, 1750, 2246, 2774, 3149
AcuI CTGAAG 2 cut(s) 27, 2132
AfaI GTAC 7 cut(s) 327, 1554, 1708, 2349, 2708, 2859, 2935
AfiI CCNNNNNNNGG 4 cut(s) 2149, 2344, 2432, 3160
AflIII ACRYGT 2 cut(s) 213, 977
AjiI CACGTC 1 cut(s) 214
AjnI CCWGG 3 cut(s) 2271, 3138, 3183
AloI GAACNNNNNNTCC 2 cut(s) 1257, 1289
Alw21I GWGCWC 1 cut(s) 147
Alw26I GTCTC 5 cut(s) 70, 157, 997, 2755, 2826
AlwI GGATC 2 cut(s) 737, 2320
AlwNI CAGNNNCTG 1 cut(s) 2764
Ama87I CYCGRG 1 cut(s) 2588
Aor13HI TCCGGA 1 cut(s) 186
AoxI GGCC 6 cut(s) 2811, 3136, 3141, 3166, 3186, 3202
ApeKI GCWGC 4 cut(s) 1169, 2593, 2755, 3215
ApoI RAATTY 6 cut(s) 723, 963, 1750, 2246, 2774, 3149
ArsI GACNNNNNNTTYG 4 cut(s) 203, 235, 1771, 1803
AseI ATTAAT 1 cut(s) 2321
Asp700I GAANNNNTTC 3 cut(s) 132, 1451, 3023
AspLEI GCGC 2 cut(s) 2206, 3215
AspS9I GGNCC 2 cut(s) 2140, 2811
AsuC2I CCSGG 2 cut(s) 2339, 3059
AsuHPI GGTGA 8 cut(s) 85, 308, 1913, 2107, 2224, 2494, 3028, 3046
AsuII TTCGAA 1 cut(s) 1927
AvaI CYCGRG 1 cut(s) 2588
AvaII GGWCC 1 cut(s) 2140
AxyI CCTNAGG 1 cut(s) 2967
BbsI GAAGAC 2 cut(s) 513, 2753
Bbv12I GWGCWC 1 cut(s) 147
BbvI GCAGC 4 cut(s) 1156, 2580, 2742, 3202
BceAI ACGGC 5 cut(s) 2546, 2916, 2999, 3128, 3130
BcgI CGANNNNNNTGC 2 cut(s) 1907, 1941
BciT130I CCWGG 3 cut(s) 2273, 3140, 3185
BclI TGATCA 1 cut(s) 1980
BcnI CCSGG 2 cut(s) 2339, 3059
BcoDI GTCTC 5 cut(s) 70, 157, 997, 2755, 2826
BfaI CTAG 4 cut(s) 348, 540, 1622, 2603
BfmI CTRYAG 2 cut(s) 306, 2756
BfoI RGCGCY 1 cut(s) 3216
BfuAI ACCTGC 1 cut(s) 2977
BglI GCCNNNNNGGC 2 cut(s) 3174, 3210
BglII AGATCT 3 cut(s) 1472, 2125, 2925
BisI GCNGC 6 cut(s) 1170, 2594, 2756, 3175, 3216, 3269
BlsI GCNGC 6 cut(s) 1171, 2595, 2757, 3176, 3217, 3270
BmcAI AGTACT 1 cut(s) 1708
Bme1390I CCNGG 5 cut(s) 2273, 2339, 3059, 3140, 3185
Bme18I GGWCC 1 cut(s) 2140
BmeT110I CYCGRG 1 cut(s) 2588
BmgBI CACGTC 1 cut(s) 214
BmgT120I GGNCC 2 cut(s) 2140, 2811
BmiI GGNNCC 2 cut(s) 177, 899
BmrFI CCNGG 5 cut(s) 2273, 2339, 3059, 3140, 3185
BmsI GCATC 2 cut(s) 2002, 2173
BpiI GAAGAC 2 cut(s) 513, 2753
BpmI CTGGAG 1 cut(s) 2150
Bpu14I TTCGAA 1 cut(s) 1927
BpuMI CCSGG 2 cut(s) 2339, 3059
BsaAI YACGTR 1 cut(s) 980
BsaBI GATNNNNATC 2 cut(s) 1305, 1613
BsaJI CCNNGG 4 cut(s) 2329, 2338, 3057, 3183
BsaWI WCCGGW 2 cut(s) 186, 953
Bsc4I CCNNNNNNNGG 4 cut(s) 2149, 2344, 2432, 3160
Bse1I ACTGG 2 cut(s) 2954, 3205
Bse21I CCTNAGG 1 cut(s) 2967
Bse3DI GCAATG 3 cut(s) 402, 499, 2563
Bse8I GATNNNNATC 2 cut(s) 1305, 1613
BseAI TCCGGA 1 cut(s) 186
BseBI CCWGG 3 cut(s) 2273, 3140, 3185
BseDI CCNNGG 4 cut(s) 2329, 2338, 3057, 3183
BseJI GATNNNNATC 2 cut(s) 1305, 1613
BseLI CCNNNNNNNGG 4 cut(s) 2149, 2344, 2432, 3160
BseMI GCAATG 3 cut(s) 402, 499, 2563
BseMII CTCAG 4 cut(s) 1757, 2756, 2958, 2985
BseNI ACTGG 2 cut(s) 2954, 3205
BseRI GAGGAG 6 cut(s) 173, 631, 1271, 2418, 2883, 3011
BseXI GCAGC 4 cut(s) 1156, 2580, 2742, 3202
BseYI CCCAGC 1 cut(s) 2636
Bsh1236I CGCG 1 cut(s) 3174
BshFI GGCC 6 cut(s) 2813, 3138, 3143, 3168, 3188, 3204
BsiHKAI GWGCWC 1 cut(s) 147
BsiHKCI CYCGRG 1 cut(s) 2588
BsiSI CCGG 6 cut(s) 179, 187, 954, 2338, 2732, 3059
BslFI GGGAC 1 cut(s) 339
BslI CCNNNNNNNGG 4 cut(s) 2149, 2344, 2432, 3160
BsmAI GTCTC 5 cut(s) 70, 157, 997, 2755, 2826
BsmFI GGGAC 1 cut(s) 339
BsmI GAATGC 3 cut(s) 157, 2293, 2596
BsnI GGCC 6 cut(s) 2813, 3138, 3143, 3168, 3188, 3204
BsoBI CYCGRG 1 cut(s) 2588
Bsp119I TTCGAA 1 cut(s) 1927
Bsp1286I GDGCHC 1 cut(s) 147
Bsp13I TCCGGA 1 cut(s) 186
Bsp1407I TGTACA 1 cut(s) 2857
BspACI CCGC 7 cut(s) 1313, 2258, 2753, 3121, 3174, 3268, 3271
BspANI GGCC 6 cut(s) 2813, 3138, 3143, 3168, 3188, 3204
BspCNI CTCAG 4 cut(s) 1758, 2757, 2959, 2986
BspEI TCCGGA 1 cut(s) 186
BspFNI CGCG 1 cut(s) 3174
BspHI TCATGA 1 cut(s) 397
BspLI GGNNCC 2 cut(s) 177, 899
BspMAI CTGCAG 1 cut(s) 2760
BspMI ACCTGC 1 cut(s) 2977
BspPI GGATC 2 cut(s) 737, 2320
BspQI GCTCTTC 1 cut(s) 138
BspT104I TTCGAA 1 cut(s) 1927
BsrDI GCAATG 3 cut(s) 402, 499, 2563
BsrGI TGTACA 1 cut(s) 2857
BsrI ACTGG 2 cut(s) 2954, 3205
BssECI CCNNGG 4 cut(s) 2329, 2338, 3057, 3183
BssT1I CCWWGG 1 cut(s) 2329
Bst2UI CCWGG 3 cut(s) 2273, 3140, 3185
Bst4CI ACNGT 7 cut(s) 1337, 1557, 1897, 1969, 2080, 2808, 3252
Bst6I CTCTTC 4 cut(s) 138, 713, 1929, 2610
BstAUI TGTACA 1 cut(s) 2857
BstBAI YACGTR 1 cut(s) 980
BstBI TTCGAA 1 cut(s) 1927
BstC8I GCNNGC 1 cut(s) 39
BstEII GGTNACC 1 cut(s) 2333
BstFNI CGCG 1 cut(s) 3174
BstH2I RGCGCY 1 cut(s) 3216
BstHHI GCGC 2 cut(s) 2206, 3215
BstMAI GTCTC 5 cut(s) 70, 157, 997, 2755, 2826
BstNI CCWGG 3 cut(s) 2273, 3140, 3185
BstPI GGTNACC 1 cut(s) 2333
BstSCI CCNGG 5 cut(s) 2271, 2337, 3057, 3138, 3183
BstSFI CTRYAG 2 cut(s) 306, 2756
BstUI CGCG 1 cut(s) 3174
BstV1I GCAGC 4 cut(s) 1156, 2580, 2742, 3202
BstV2I GAAGAC 2 cut(s) 513, 2753
BstX2I RGATCY 3 cut(s) 1472, 2125, 2925
BstXI CCANNNNNNTGG 1 cut(s) 1897
BstYI RGATCY 3 cut(s) 1472, 2125, 2925
Bsu36I CCTNAGG 1 cut(s) 2967
BsuRI GGCC 6 cut(s) 2813, 3138, 3143, 3168, 3188, 3204
BtgZI GCGATG 1 cut(s) 3155
BtrI CACGTC 1 cut(s) 214
BtsI GCAGTG 1 cut(s) 845
BtsIMutI CAGTG 4 cut(s) 845, 1965, 2813, 3198
BveI ACCTGC 1 cut(s) 2977
Cac8I GCNNGC 1 cut(s) 39
CaiI CAGNNNCTG 1 cut(s) 2764
CciI TCATGA 1 cut(s) 397
CfoI GCGC 2 cut(s) 2206, 3215
Cfr13I GGNCC 2 cut(s) 2140, 2811
CseI GACGC 2 cut(s) 383, 1835
Csp6I GTAC 7 cut(s) 326, 1553, 1707, 2348, 2707, 2858, 2934
CviQI GTAC 7 cut(s) 326, 1553, 1707, 2348, 2707, 2858, 2934
DraI TTTAAA 4 cut(s) 1111, 1416, 1492, 1728
EaeI YGGCCR 1 cut(s) 3141
Eam1104I CTCTTC 4 cut(s) 138, 713, 1929, 2610
EarI CTCTTC 4 cut(s) 138, 713, 1929, 2610
Eco130I CCWWGG 1 cut(s) 2329
Eco47I GGWCC 1 cut(s) 2140
Eco57I CTGAAG 2 cut(s) 27, 2132
Eco81I CCTNAGG 1 cut(s) 2967
Eco88I CYCGRG 1 cut(s) 2588
Eco91I GGTNACC 1 cut(s) 2333
EcoO65I GGTNACC 1 cut(s) 2333
EcoRI GAATTC 1 cut(s) 3149
EcoRII CCWGG 3 cut(s) 2271, 3138, 3183
EcoT14I CCWWGG 1 cut(s) 2329
EcoT22I ATGCAT 1 cut(s) 1533
ErhI CCWWGG 1 cut(s) 2329
FalI AAGNNNNNCTT 4 cut(s) 424, 456, 1392, 1424
FaqI GGGAC 1 cut(s) 339
FbaI TGATCA 1 cut(s) 1980
FblI GTMKAC 2 cut(s) 2158, 2803
Fnu4HI GCNGC 6 cut(s) 1170, 2594, 2756, 3175, 3216, 3269
Fsp4HI GCNGC 6 cut(s) 1170, 2594, 2756, 3175, 3216, 3269
FspBI CTAG 4 cut(s) 348, 540, 1622, 2603
GlaI GCGC 2 cut(s) 2205, 3214
GluI GCNGC 6 cut(s) 1170, 2594, 2756, 3175, 3216, 3269
GsaI CCCAGC 1 cut(s) 2640
GsuI CTGGAG 1 cut(s) 2150
HaeII RGCGCY 1 cut(s) 3216
HaeIII GGCC 6 cut(s) 2813, 3138, 3143, 3168, 3188, 3204
HapII CCGG 6 cut(s) 179, 187, 954, 2338, 2732, 3059
HgaI GACGC 2 cut(s) 383, 1835
HhaI GCGC 2 cut(s) 2206, 3215
Hin6I GCGC 2 cut(s) 2204, 3213
HinP1I GCGC 2 cut(s) 2204, 3213
HincII GTYRAC 1 cut(s) 94
HindII GTYRAC 1 cut(s) 94
HindIII AAGCTT 5 cut(s) 933, 1176, 1291, 1946, 2489
HpaII CCGG 6 cut(s) 179, 187, 954, 2338, 2732, 3059
HphI GGTGA 8 cut(s) 85, 308, 1913, 2107, 2224, 2494, 3028, 3046
Hpy166II GTNNAC 6 cut(s) 94, 2076, 2159, 2267, 2804, 3091
Hpy188I TCNGA 7 cut(s) 114, 742, 850, 1035, 1446, 2665, 2995
Hpy8I GTNNAC 6 cut(s) 94, 2076, 2159, 2267, 2804, 3091
Hpy99I CGWCG 5 cut(s) 236, 3068, 3071, 3116, 3149
HpyAV CCTTC 6 cut(s) 316, 605, 2171, 2618, 3007, 3229
HpyCH4III ACNGT 7 cut(s) 1337, 1557, 1897, 1969, 2080, 2808, 3252
HpyCH4IV ACGT 6 cut(s) 213, 234, 328, 518, 979, 3195
HpySE526I ACGT 6 cut(s) 213, 234, 328, 518, 979, 3195
HspAI GCGC 2 cut(s) 2204, 3213
Kpn2I TCCGGA 1 cut(s) 186
Ksp22I TGATCA 1 cut(s) 1980
LguI GCTCTTC 1 cut(s) 138
LmnI GCTCC 3 cut(s) 150, 175, 2643
Lsp1109I GCAGC 4 cut(s) 1156, 2580, 2742, 3202
LweI GCATC 2 cut(s) 2002, 2173
MaeI CTAG 4 cut(s) 348, 540, 1622, 2603
MaeII ACGT 6 cut(s) 213, 234, 328, 518, 979, 3195
MfeI CAATTG 3 cut(s) 361, 677, 2207
MflI RGATCY 3 cut(s) 1472, 2125, 2925
MhlI GDGCHC 1 cut(s) 147
MlyI GAGTC 4 cut(s) 628, 1801, 2637, 3026
MmeI TCCRAC 4 cut(s) 45, 2118, 2454, 3239
Mph1103I ATGCAT 1 cut(s) 1533
MroI TCCGGA 1 cut(s) 186
MroXI GAANNNNTTC 3 cut(s) 132, 1451, 3023
MslI CAYNNNNRTG 2 cut(s) 2913, 3128
MspA1I CMGCKG 3 cut(s) 1313, 2636, 2755
MspI CCGG 6 cut(s) 179, 187, 954, 2338, 2732, 3059
MspR9I CCNGG 5 cut(s) 2273, 2339, 3059, 3140, 3185
MssI GTTTAAAC 1 cut(s) 1416
MunI CAATTG 3 cut(s) 361, 677, 2207
Mva1269I GAATGC 3 cut(s) 157, 2293, 2596
MvaI CCWGG 3 cut(s) 2273, 3140, 3185
MvnI CGCG 1 cut(s) 3174
NciI CCSGG 2 cut(s) 2339, 3059
NlaIV GGNNCC 2 cut(s) 177, 899
NmeAIII GCCGAG 3 cut(s) 830, 2839, 3077
NmuCI GTSAC 4 cut(s) 970, 1395, 2629, 3196
NsiI ATGCAT 1 cut(s) 1533
NspV TTCGAA 1 cut(s) 1927
PaeR7I CTCGAG 1 cut(s) 2588
PagI TCATGA 1 cut(s) 397
PaqCI CACCTGC 1 cut(s) 2977
PciSI GCTCTTC 1 cut(s) 138
PcsI WCGNNNNNNNCGW 3 cut(s) 240, 2412, 2907
PctI GAATGC 3 cut(s) 157, 2293, 2596
PdmI GAANNNNTTC 3 cut(s) 132, 1451, 3023
PfeI GAWTC 6 cut(s) 259, 1306, 1929, 2009, 2660, 2939
PkrI GCNGC 6 cut(s) 1171, 2595, 2757, 3176, 3217, 3270
PleI GAGTC 4 cut(s) 627, 1800, 2636, 3026
PmeI GTTTAAAC 1 cut(s) 1416
PpsI GAGTC 4 cut(s) 627, 1800, 2636, 3026
Ppu21I YACGTR 1 cut(s) 980
PshBI ATTAAT 1 cut(s) 2321
Psp6I CCWGG 3 cut(s) 2271, 3138, 3183
PspEI GGTNACC 1 cut(s) 2333
PspFI CCCAGC 1 cut(s) 2636
PspGI CCWGG 3 cut(s) 2271, 3138, 3183
PspN4I GGNNCC 2 cut(s) 177, 899
PspPI GGNCC 2 cut(s) 2140, 2811
PspXI VCTCGAGB 1 cut(s) 2588
PstI CTGCAG 1 cut(s) 2760
PstNI CAGNNNCTG 1 cut(s) 2764
PsuI RGATCY 3 cut(s) 1472, 2125, 2925
PvuII CAGCTG 1 cut(s) 2636
RsaI GTAC 7 cut(s) 327, 1554, 1708, 2349, 2708, 2859, 2935
RsaNI GTAC 7 cut(s) 326, 1553, 1707, 2348, 2707, 2858, 2934
RseI CAYNNNNRTG 2 cut(s) 2913, 3128
SapI GCTCTTC 1 cut(s) 138
SatI GCNGC 6 cut(s) 1170, 2594, 2756, 3175, 3216, 3269
Sau96I GGNCC 2 cut(s) 2140, 2811
ScaI AGTACT 1 cut(s) 1708
SchI GAGTC 4 cut(s) 628, 1801, 2637, 3026
ScrFI CCNGG 5 cut(s) 2273, 2339, 3059, 3140, 3185
SduI GDGCHC 1 cut(s) 147
SfaNI GCATC 2 cut(s) 2002, 2173
SfcI CTRYAG 2 cut(s) 306, 2756
Sfr274I CTCGAG 1 cut(s) 2588
SfuI TTCGAA 1 cut(s) 1927
SinI GGWCC 1 cut(s) 2140
SlaI CTCGAG 1 cut(s) 2588
SmiMI CAYNNNNRTG 2 cut(s) 2913, 3128
SmlI CTYRAG 1 cut(s) 2588
SmoI CTYRAG 1 cut(s) 2588
SsiI CCGC 7 cut(s) 1313, 2258, 2753, 3121, 3174, 3268, 3271
SspI AATATT 4 cut(s) 1375, 1513, 1537, 2112
SspMI CTAG 4 cut(s) 348, 540, 1622, 2603
StyD4I CCNGG 5 cut(s) 2271, 2337, 3057, 3138, 3183
StyI CCWWGG 1 cut(s) 2329
TaaI ACNGT 7 cut(s) 1337, 1557, 1897, 1969, 2080, 2808, 3252
TaiI ACGT 6 cut(s) 216, 237, 331, 521, 982, 3198
TaqI TCGA 9 cut(s) 126, 1636, 1927, 2097, 2589, 2838, 2978, 3147, 3179
TatI WGTACW 2 cut(s) 1706, 2857
TauI GCSGC 2 cut(s) 3177, 3271
TfiI GAWTC 6 cut(s) 259, 1306, 1929, 2009, 2660, 2939
TscAI CASTG 4 cut(s) 845, 1972, 2813, 3205
TseFI GTSAC 4 cut(s) 970, 1395, 2629, 3196
TseI GCWGC 4 cut(s) 1169, 2593, 2755, 3215
Tsp45I GTSAC 4 cut(s) 970, 1395, 2629, 3196
TspGWI ACGGA 1 cut(s) 3247
TspRI CASTG 4 cut(s) 845, 1972, 2813, 3205
VpaK11BI GGWCC 1 cut(s) 2140
VspI ATTAAT 1 cut(s) 2321
XapI RAATTY 6 cut(s) 723, 963, 1750, 2246, 2774, 3149
XbaI TCTAGA 1 cut(s) 539
XhoI CTCGAG 1 cut(s) 2588
XmiI GTMKAC 2 cut(s) 2158, 2803
XmnI GAANNNNTTC 3 cut(s) 132, 1451, 3023
XspI CTAG 4 cut(s) 348, 540, 1622, 2603
ZrmI AGTACT 1 cut(s) 1708
Zsp2I ATGCAT 1 cut(s) 1533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.