MD08G1094300.v1.1

disease resistance protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
7828277 .. 7830760
2484 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1094300.v1.1.491

Sequence Viewer

Length: 2484 bp
ATGGCCGAGGCACTCATTTCCGTGCTTCTCGAACAACTGGCTTCGGTAACGTACCAACAAGTCGGAGAAGAGGTGAAGCTGGTTTTGAATGCTAAGAAAGATGTTGATGCATTTGCTGCCAACCTTGAAGCGATTGGTGCTGTGCTTGAGGATGCGGAGCAGAGGCAAGTGAAGGAGGCCAGCGTCAGAAATTGGCTGGAGAAGCTGAAAGATGTGTCGTACAAGATGGACAATGTGCTGGATGAGTGGAAGACTGAAATACTGAAACAACAAGTTGAGAATGAAGAAGAGCACGGTGGAAGTACTTCTCTTGTTACCAAGAAGAAGAAGAAGAAGGCGGTATGTTTCTCTATTTCCTCCTCTTGCCCTTGTTTCCGCCAAGTCCGCCGGATAATTCTTCGTCATGACATTGCTCTTAAGATCAAAAGTCTAAATGAAAATTTGGATGTGATTGCTAAGCAAAGAGAAACATATAACTTTCAAATCACAGAGAGAATGATCAGTGAACAACCTAAGCGAGAGACAACTTCTTTTGTTGATGAATCTATCATATTTGGTAGAGATCAACAAAAGGAAGTTTTGGTCAGCAAGTTGTTGAATGAGAGTAGTCAAGAAGAGAGGGGCCTCCTTGTCATCCCTATTGTCGGGATGGGAGGAATGGGGAAGACAACTCTGGCCCAATTGGCTTTTAACGATGAAAATGTTAAAGCCTGTTTTCAGATCAAAATATGGGTTTGTGTTTCGGACCCTTTTGATGAGATCAAAATTGCCAAGGCCATCATTGAGGGTGTCAAAAAAGATACCAGCCCAAATTCAGATGAATTGGAAACTTTCTTGCAATGTATGTCTAAATCCATTGAGGGAAAGAAGTTTCTCCTTGTTCTAGACGATGTGTGGACTGAGGACCAAGGAAAGTGGGAGAAATTGAAGTTGCCATTAATACAAAGTGGCGCCCATGGCAGTAGAATATTGGTGACCACTCGAAAACAGAAGGTTGCTGATATGATGGGAGCTCCCACTCACACGATCTATTTGGAGAGGTTGAGCGAACAAAATTGTTTGTCAATATTCAACCGCATGGCATTTTATAATAGGGATAAGGATGGTGTGTTGGAAGCCATTGGTGAAGAAATAGCAAAAAAGTGCAAGGGTTTGCCTCTTGCTGCAAAGACTTTGGGTAGTCTCATGCGTTACAAGAAAACGAGGAAAGAATGGCAAGAAGTTTTGAACAGTAAGATATGGGAGCTAGAAGAGGTTGGGCAACAAGTTTTCCAACCACTATTACTGAGTTATCTTGATTTGGCACCTGCAGTCAAACGATGCCTTTTATATTGTGTTATCTTTCCAAAAGATCATGTGATCTATAAAGATTATTTGATTGAGTTGTGGATGTCACAAGGTTATCTCTATTCGAAGGGAAACATAGAGAAGGAAATAATTGGCCAAAGGTGTTTTGATAATTTAGCAATGCGGTCTTTCTTCCAAGACTTCCAAGAAGACAGAGATGGAAATATCTGGAGGTGTAAAATGCATGATATTGTGCACGACTTTCTGCAGTATCTTACTCAACATGAATGCTTTAAAATGGAGGTTAAGGGTGGTAACGATACAATAAAGCCCTTGGGTGATAAGATCCGCCATTTGACCTTAATGCTTGCGCCTGAGGGTCCACTCTCATGCATTTCGTTTTCTAGCTGCAATCTACGTACTCTTGCAAGTTTTGATTCAAAATTTAATGTTGTGGACTCAACTTTGATTGCGCAGTTGAAACATCTTAGGACATTAAATTTGAGTGATAATTCTATTGAAATGCTTCCGGAAGAGACAAGTCAATTGGTGCATCTGAGGTTTATTGATTTGTCCCGTAATCCTTTGAAAAAGCTACCGAATGGGGTGTGTAATTTATACAATTTGCAGACATTGCGCCTTAATTGGTGTGAGAAACTTGAAAGTCTACCTCAGAGCGTGGGAAAGTTGATTAACTTAAAGCATCTTTATGTTGAGTATTGTTTTCAGCTAAAGTACTTGCCGAAAGGGATTGGGAGATTAACAAATCTAAGAAGACTAGATCGGTGCCCTGTTGGCGGTGGTAAAGACGACGATGAAGCATTCAAATTGGGAGATTTGAGAAACTTAGACCAACTTCAGGGTAAACTACAGATGGTTATTTATGGGGATGTGAAAGTTGCTGCGGGTGAGCTGGGGAACAAACAACAACTCTCAGAATTGAGTATAGAGTTTGAGGAGTGTGGAACTGCGGAAATACTGAATTTCTTACGACCGCATCCAAATTTGGAATATTTAAGAATCAATGGCTATAATGGAAGCACTGCCCCCAACTGGATCATGTCATTAAACAATTCGAGAGTTCTTCATCTTGCGTGGTGGAATGAATGTGAAGTTTTACCTCCTTTGGGAATATTGCCGTCCCTCGAAAGGCTGGAGATTGATGGTATGAACTGTGAGGGGTTAGGTCCCACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

828

Amino Acids

94.33

Weight (kDa)

6.25

Isoelectric Point (pI)

43.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 6 - 100 4e-20 Rx N-terminal domain
NB-ARC PF00931 189 - 366 3.8e-36 NB-ARC domain
WHD_DRP PF23559 447 - 517 2.3e-23 Disease resistance protein Winged helix domain
LRR_14 PF23598 568 - 817 1.3e-30 Leucine-rich repeat region
LRR_8 PF13855 575 - 625 1.6e-07 Leucine rich repeat
LRR_R13L1-DRL21 PF25019 706 - 819 1.5e-21 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1089
AarI CACCTGC 1 cut(s) 1315
Acc16I TGCGCA 1 cut(s) 1761
Acc36I ACCTGC 1 cut(s) 1315
AccB1I GGYRCC 3 cut(s) 950, 1303, 2073
AccI GTMKAC 1 cut(s) 1954
AccIII TCCGGA 1 cut(s) 1816
AclWI GGATC 2 cut(s) 1627, 2351
AcoI YGGCCR 2 cut(s) 3, 1441
AcsI RAATTY 6 cut(s) 439, 811, 1730, 1786, 2269, 2290
AcuI CTGAAG 1 cut(s) 2129
AcyI GRCGYC 1 cut(s) 951
AfaI GTAC 5 cut(s) 53, 221, 304, 1708, 2024
AfiI CCNNNNNNNGG 6 cut(s) 644, 2084, 2146, 2340, 2414, 2436
AflII CTTAAG 1 cut(s) 416
AluBI AGCT 8 cut(s) 79, 205, 1013, 1246, 1695, 1882, 2017, 2200
AluI AGCT 8 cut(s) 79, 205, 1013, 1246, 1695, 1882, 2017, 2200
Alw21I GWGCWC 3 cut(s) 294, 1015, 1545
Alw26I GTCTC 3 cut(s) 515, 1187, 1817
Alw44I GTGCAC 1 cut(s) 1541
AlwI GGATC 2 cut(s) 1627, 2351
Aor13HI TCCGGA 1 cut(s) 1816
AoxI GGCC 6 cut(s) 3, 177, 622, 675, 774, 1441
ApaLI GTGCAC 1 cut(s) 1541
ApeKI GCWGC 4 cut(s) 116, 1163, 1695, 2189
ApoI RAATTY 6 cut(s) 439, 811, 1730, 1786, 2269, 2290
ArsI GACNNNNNNTTYG 2 cut(s) 1771, 1803
AseI ATTAAT 1 cut(s) 938
Asp700I GAANNNNTTC 2 cut(s) 304, 1812
AspLEI GCGC 4 cut(s) 953, 1660, 1762, 1926
AspS9I GGNCC 6 cut(s) 622, 676, 745, 904, 1667, 2474
AsuHPI GGTGA 5 cut(s) 85, 985, 1136, 1637, 2207
AsuII TTCGAA 1 cut(s) 1412
AvaII GGWCC 4 cut(s) 745, 904, 1667, 2474
AxyI CCTNAGG 1 cut(s) 1662
BaeGI GKGCMC 2 cut(s) 1545, 2078
BalI TGGCCA 1 cut(s) 1443
BanI GGYRCC 3 cut(s) 950, 1303, 2073
BanII GRGCYC 1 cut(s) 1015
BbsI GAAGAC 4 cut(s) 257, 671, 1503, 2068
Bbv12I GWGCWC 3 cut(s) 294, 1015, 1545
BbvI GCAGC 4 cut(s) 103, 1150, 1682, 2176
BccI CCATC 8 cut(s) 220, 643, 785, 1000, 1097, 1499, 2155, 2444
BceAI ACGGC 1 cut(s) 2410
BclI TGATCA 1 cut(s) 498
BcoDI GTCTC 3 cut(s) 515, 1187, 1817
BfaI CTAG 4 cut(s) 884, 1247, 1692, 2066
BfmI CTRYAG 3 cut(s) 1308, 1553, 2156
BfoI RGCGCY 1 cut(s) 954
BfrI CTTAAG 1 cut(s) 416
BfuAI ACCTGC 1 cut(s) 1315
BglI GCCNNNNNGGC 2 cut(s) 683, 2082
BisI GCNGC 4 cut(s) 117, 1164, 1696, 2190
BlpI GCTNAGC 1 cut(s) 456
BlsI GCNGC 4 cut(s) 118, 1165, 1697, 2191
BmcAI AGTACT 2 cut(s) 304, 2024
Bme18I GGWCC 4 cut(s) 745, 904, 1667, 2474
BmgT120I GGNCC 6 cut(s) 622, 676, 745, 904, 1667, 2474
BmiI GGNNCC 7 cut(s) 623, 747, 952, 1305, 1668, 2075, 2476
BmsI GCATC 6 cut(s) 97, 142, 1310, 1849, 1999, 2293
BpiI GAAGAC 4 cut(s) 257, 671, 1503, 2068
BpmI CTGGAG 3 cut(s) 218, 1537, 2462
Bpu10I CCTNAGC 1 cut(s) 513
Bpu1102I GCTNAGC 1 cut(s) 456
Bpu14I TTCGAA 1 cut(s) 1412
BpuEI CTTGAG 1 cut(s) 167
BsaAI YACGTR 1 cut(s) 1706
BsaHI GRCGYC 1 cut(s) 951
BsaJI CCNNGG 5 cut(s) 6, 771, 907, 955, 1620
BsaWI WCCGGW 1 cut(s) 1816
BsaXI ACNNNNNCTCC 2 cut(s) 57, 87
Bsc4I CCNNNNNNNGG 6 cut(s) 644, 2084, 2146, 2340, 2414, 2436
Bse1I ACTGG 2 cut(s) 42, 2345
Bse21I CCTNAGG 1 cut(s) 1662
Bse3DI GCAATG 4 cut(s) 408, 845, 1473, 1919
BseAI TCCGGA 1 cut(s) 1816
BseDI CCNNGG 5 cut(s) 6, 771, 907, 955, 1620
BseGI GGATG 9 cut(s) 157, 247, 451, 633, 654, 1108, 1395, 2182, 2284
BseLI CCNNNNNNNGG 6 cut(s) 644, 2084, 2146, 2340, 2414, 2436
BseMI GCAATG 4 cut(s) 408, 845, 1473, 1919
BseMII CTCAG 6 cut(s) 891, 1277, 1653, 1835, 1973, 2235
BseNI ACTGG 2 cut(s) 42, 2345
BseRI GAGGAG 2 cut(s) 349, 2258
BseSI GKGCMC 2 cut(s) 1545, 2078
BseXI GCAGC 4 cut(s) 103, 1150, 1682, 2176
BseYI CCCAGC 1 cut(s) 2200
Bsh1285I CGRYCG 1 cut(s) 2282
BshFI GGCC 6 cut(s) 5, 179, 624, 677, 776, 1443
BshNI GGYRCC 3 cut(s) 950, 1303, 2073
BsiEI CGRYCG 1 cut(s) 2282
BsiHKAI GWGCWC 3 cut(s) 294, 1015, 1545
BsiSI CCGG 2 cut(s) 388, 1817
BslFI GGGAC 3 cut(s) 1846, 2413, 2460
BslI CCNNNNNNNGG 6 cut(s) 644, 2084, 2146, 2340, 2414, 2436
BsmAI GTCTC 3 cut(s) 515, 1187, 1817
BsmFI GGGAC 3 cut(s) 1846, 2413, 2460
BsmI GAATGC 3 cut(s) 94, 1580, 2108
BsnI GGCC 6 cut(s) 5, 179, 624, 677, 776, 1443
Bsp119I TTCGAA 1 cut(s) 1412
Bsp1286I GDGCHC 4 cut(s) 294, 1015, 1545, 2078
Bsp13I TCCGGA 1 cut(s) 1816
Bsp1720I GCTNAGC 1 cut(s) 456
Bsp19I CCATGG 1 cut(s) 955
BspANI GGCC 6 cut(s) 5, 179, 624, 677, 776, 1443
BspCNI CTCAG 6 cut(s) 892, 1278, 1654, 1836, 1972, 2234
BspEI TCCGGA 1 cut(s) 1816
BspHI TCATGA 1 cut(s) 403
BspLI GGNNCC 7 cut(s) 623, 747, 952, 1305, 1668, 2075, 2476
BspMAI CTGCAG 2 cut(s) 1312, 1557
BspMI ACCTGC 1 cut(s) 1315
BspPI GGATC 2 cut(s) 1627, 2351
BspQI GCTCTTC 1 cut(s) 282
BspT104I TTCGAA 1 cut(s) 1412
BspT107I GGYRCC 3 cut(s) 950, 1303, 2073
BspTI CTTAAG 1 cut(s) 416
BsrDI GCAATG 4 cut(s) 408, 845, 1473, 1919
BsrI ACTGG 2 cut(s) 42, 2345
BssECI CCNNGG 5 cut(s) 6, 771, 907, 955, 1620
BssNI GRCGYC 1 cut(s) 951
BssT1I CCWWGG 4 cut(s) 771, 907, 955, 1620
Bst4CI ACNGT 3 cut(s) 296, 1232, 2462
Bst6I CTCTTC 5 cut(s) 63, 282, 609, 1245, 1815
BstACI GRCGYC 1 cut(s) 951
BstAFI CTTAAG 1 cut(s) 416
BstAPI GCANNNNNTGC 2 cut(s) 116, 1921
BstBAI YACGTR 1 cut(s) 1706
BstBI TTCGAA 1 cut(s) 1412
BstC8I GCNNGC 2 cut(s) 181, 1656
BstDSI CCRYGG 1 cut(s) 955
BstEII GGTNACC 1 cut(s) 973
BstF5I GGATG 9 cut(s) 157, 247, 451, 633, 654, 1108, 1395, 2182, 2284
BstH2I RGCGCY 1 cut(s) 954
BstHHI GCGC 4 cut(s) 953, 1660, 1762, 1926
BstMAI GTCTC 3 cut(s) 515, 1187, 1817
BstMCI CGRYCG 1 cut(s) 2282
BstMWI GCNNNNNNNGC 8 cut(s) 116, 137, 202, 384, 683, 957, 1921, 2082
BstPI GGTNACC 1 cut(s) 973
BstSFI CTRYAG 3 cut(s) 1308, 1553, 2156
BstSLI GKGCMC 2 cut(s) 1545, 2078
BstSNI TACGTA 1 cut(s) 1706
BstV1I GCAGC 4 cut(s) 103, 1150, 1682, 2176
BstV2I GAAGAC 4 cut(s) 257, 671, 1503, 2068
BstX2I RGATCY 1 cut(s) 1632
BstYI RGATCY 1 cut(s) 1632
Bsu36I CCTNAGG 1 cut(s) 1662
BsuRI GGCC 6 cut(s) 5, 179, 624, 677, 776, 1443
BtgI CCRYGG 1 cut(s) 955
BtsCI GGATG 9 cut(s) 157, 247, 451, 633, 654, 1108, 1395, 2182, 2284
BtsI GCAGTG 1 cut(s) 2328
BtsIMutI CAGTG 2 cut(s) 508, 2328
BveI ACCTGC 1 cut(s) 1315
Cac8I GCNNGC 2 cut(s) 181, 1656
CciI TCATGA 1 cut(s) 403
CfoI GCGC 4 cut(s) 953, 1660, 1762, 1926
Cfr13I GGNCC 6 cut(s) 622, 676, 745, 904, 1667, 2474
CseI GACGC 1 cut(s) 172
Csp6I GTAC 5 cut(s) 52, 220, 303, 1707, 2023
CspCI CAANNNNNGTGG 2 cut(s) 896, 931
CviQI GTAC 5 cut(s) 52, 220, 303, 1707, 2023
DinI GGCGCC 1 cut(s) 952
DraI TTTAAA 1 cut(s) 1582
EaeI YGGCCR 2 cut(s) 3, 1441
Eam1104I CTCTTC 5 cut(s) 63, 282, 609, 1245, 1815
EarI CTCTTC 5 cut(s) 63, 282, 609, 1245, 1815
EciI GGCGGA 3 cut(s) 365, 374, 1625
Ecl136II GAGCTC 1 cut(s) 1013
Eco105I TACGTA 1 cut(s) 1706
Eco130I CCWWGG 4 cut(s) 771, 907, 955, 1620
Eco24I GRGCYC 1 cut(s) 1015
Eco47I GGWCC 4 cut(s) 745, 904, 1667, 2474
Eco53kI GAGCTC 1 cut(s) 1013
Eco57I CTGAAG 1 cut(s) 2129
Eco81I CCTNAGG 1 cut(s) 1662
Eco91I GGTNACC 1 cut(s) 973
EcoICRI GAGCTC 1 cut(s) 1013
EcoO109I RGGNCCY 2 cut(s) 622, 2474
EcoO65I GGTNACC 1 cut(s) 973
EcoT14I CCWWGG 4 cut(s) 771, 907, 955, 1620
EcoT22I ATGCAT 3 cut(s) 112, 1533, 1682
EcoT38I GRGCYC 1 cut(s) 1015
EgeI GGCGCC 1 cut(s) 952
EheI GGCGCC 1 cut(s) 952
ErhI CCWWGG 4 cut(s) 771, 907, 955, 1620
FaqI GGGAC 3 cut(s) 1846, 2413, 2460
FauI CCCGC 1 cut(s) 2185
FbaI TGATCA 1 cut(s) 498
FblI GTMKAC 1 cut(s) 1954
Fnu4HI GCNGC 4 cut(s) 117, 1164, 1696, 2190
FokI GGATG 9 cut(s) 164, 254, 458, 620, 661, 1115, 1402, 2189, 2271
FriOI GRGCYC 1 cut(s) 1015
Fsp4HI GCNGC 4 cut(s) 117, 1164, 1696, 2190
FspBI CTAG 4 cut(s) 884, 1247, 1692, 2066
FspI TGCGCA 1 cut(s) 1761
GlaI GCGC 4 cut(s) 952, 1659, 1761, 1925
GluI GCNGC 4 cut(s) 117, 1164, 1696, 2190
GsaI CCCAGC 1 cut(s) 2204
GsuI CTGGAG 3 cut(s) 218, 1537, 2462
HaeII RGCGCY 1 cut(s) 954
HaeIII GGCC 6 cut(s) 5, 179, 624, 677, 776, 1443
HapII CCGG 2 cut(s) 388, 1817
HgaI GACGC 1 cut(s) 172
HhaI GCGC 4 cut(s) 953, 1660, 1762, 1926
Hin1I GRCGYC 1 cut(s) 951
Hin6I GCGC 4 cut(s) 951, 1658, 1760, 1924
HinP1I GCGC 4 cut(s) 951, 1658, 1760, 1924
HinfI GANTC 4 cut(s) 542, 1724, 1745, 2307
HpaII CCGG 2 cut(s) 388, 1817
HphI GGTGA 5 cut(s) 85, 985, 1136, 1637, 2207
Hpy166II GTNNAC 7 cut(s) 506, 897, 1543, 1670, 1744, 1955, 2153
Hpy188I TCNGA 8 cut(s) 65, 188, 720, 745, 817, 1845, 1962, 2224
Hpy188III TCNNGA 9 cut(s) 29, 404, 611, 646, 884, 1295, 1516, 1817, 2364
Hpy8I GTNNAC 7 cut(s) 506, 897, 1543, 1670, 1744, 1955, 2153
Hpy99I CGWCG 1 cut(s) 2102
HpyAV CCTTC 5 cut(s) 166, 328, 985, 1408, 1423
HpyCH4III ACNGT 3 cut(s) 296, 1232, 2462
HpyCH4IV ACGT 2 cut(s) 50, 1705
HpyF10VI GCNNNNNNNGC 8 cut(s) 116, 137, 202, 384, 683, 957, 1921, 2082
HpySE526I ACGT 2 cut(s) 50, 1705
Hsp92I GRCGYC 1 cut(s) 951
HspAI GCGC 4 cut(s) 951, 1658, 1760, 1924
KasI GGCGCC 1 cut(s) 950
Kpn2I TCCGGA 1 cut(s) 1816
Ksp22I TGATCA 1 cut(s) 498
LguI GCTCTTC 1 cut(s) 282
LmnI GCTCC 4 cut(s) 157, 1010, 1018, 1243
Lsp1109I GCAGC 4 cut(s) 103, 1150, 1682, 2176
LweI GCATC 6 cut(s) 97, 142, 1310, 1849, 1999, 2293
MaeI CTAG 4 cut(s) 884, 1247, 1692, 2066
MaeII ACGT 2 cut(s) 50, 1705
MaeIII GTNAC 6 cut(s) 46, 313, 973, 1190, 1392, 1601
MfeI CAATTG 2 cut(s) 680, 1832
MflI RGATCY 1 cut(s) 1632
MhlI GDGCHC 4 cut(s) 294, 1015, 1545, 2078
MlsI TGGCCA 1 cut(s) 1443
MluNI TGGCCA 1 cut(s) 1443
Mly113I GGCGCC 1 cut(s) 951
MlyI GAGTC 1 cut(s) 1739
MmeI TCCRAC 3 cut(s) 43, 1092, 1297
Mox20I TGGCCA 1 cut(s) 1443
Mph1103I ATGCAT 3 cut(s) 112, 1533, 1682
MroI TCCGGA 1 cut(s) 1816
MroXI GAANNNNTTC 2 cut(s) 304, 1812
MscI TGGCCA 1 cut(s) 1443
MslI CAYNNNNRTG 3 cut(s) 20, 1675, 1995
Msp20I TGGCCA 1 cut(s) 1443
MspCI CTTAAG 1 cut(s) 416
MspI CCGG 2 cut(s) 388, 1817
MunI CAATTG 2 cut(s) 680, 1832
Mva1269I GAATGC 3 cut(s) 94, 1580, 2108
MwoI GCNNNNNNNGC 8 cut(s) 116, 137, 202, 384, 683, 957, 1921, 2082
NarI GGCGCC 1 cut(s) 951
NcoI CCATGG 1 cut(s) 955
NlaIV GGNNCC 7 cut(s) 623, 747, 952, 1305, 1668, 2075, 2476
NmeAIII GCCGAG 1 cut(s) 31
NmuCI GTSAC 2 cut(s) 973, 1392
NsbI TGCGCA 1 cut(s) 1761
NsiI ATGCAT 3 cut(s) 112, 1533, 1682
NspV TTCGAA 1 cut(s) 1412
PagI TCATGA 1 cut(s) 403
PaqCI CACCTGC 1 cut(s) 1315
PciSI GCTCTTC 1 cut(s) 282
PctI GAATGC 3 cut(s) 94, 1580, 2108
PdmI GAANNNNTTC 2 cut(s) 304, 1812
PfeI GAWTC 3 cut(s) 542, 1724, 2307
PkrI GCNGC 4 cut(s) 118, 1165, 1697, 2191
PleI GAGTC 1 cut(s) 1739
PluTI GGCGCC 1 cut(s) 954
PpsI GAGTC 1 cut(s) 1739
Ppu21I YACGTR 1 cut(s) 1706
PpuMI RGGWCCY 1 cut(s) 2474
PshBI ATTAAT 1 cut(s) 938
PsiI TTATAA 1 cut(s) 1089
Psp124BI GAGCTC 1 cut(s) 1015
Psp5II RGGWCCY 1 cut(s) 2474
PspEI GGTNACC 1 cut(s) 973
PspFI CCCAGC 1 cut(s) 2200
PspN4I GGNNCC 7 cut(s) 623, 747, 952, 1305, 1668, 2075, 2476
PspPI GGNCC 6 cut(s) 622, 676, 745, 904, 1667, 2474
PspPPI RGGWCCY 1 cut(s) 2474
PstI CTGCAG 2 cut(s) 1312, 1557
PsuI RGATCY 1 cut(s) 1632
RsaI GTAC 5 cut(s) 53, 221, 304, 1708, 2024
RsaNI GTAC 5 cut(s) 52, 220, 303, 1707, 2023
RseI CAYNNNNRTG 3 cut(s) 20, 1675, 1995
SacI GAGCTC 1 cut(s) 1015
SapI GCTCTTC 1 cut(s) 282
SatI GCNGC 4 cut(s) 117, 1164, 1696, 2190
Sau96I GGNCC 6 cut(s) 622, 676, 745, 904, 1667, 2474
ScaI AGTACT 2 cut(s) 304, 2024
SchI GAGTC 1 cut(s) 1739
SduI GDGCHC 4 cut(s) 294, 1015, 1545, 2078
SfaNI GCATC 6 cut(s) 97, 142, 1310, 1849, 1999, 2293
SfcI CTRYAG 3 cut(s) 1308, 1553, 2156
SfoI GGCGCC 1 cut(s) 952
SfuI TTCGAA 1 cut(s) 1412
SinI GGWCC 4 cut(s) 745, 904, 1667, 2474
SmiMI CAYNNNNRTG 3 cut(s) 20, 1675, 1995
SmlI CTYRAG 2 cut(s) 146, 416
SmoI CTYRAG 2 cut(s) 146, 416
SnaBI TACGTA 1 cut(s) 1706
SspDI GGCGCC 1 cut(s) 950
SspI AATATT 4 cut(s) 969, 1068, 2300, 2421
SspMI CTAG 4 cut(s) 884, 1247, 1692, 2066
SstI GAGCTC 1 cut(s) 1015
StyI CCWWGG 4 cut(s) 771, 907, 955, 1620
TaaI ACNGT 3 cut(s) 296, 1232, 2462
TaiI ACGT 2 cut(s) 53, 1708
TaqI TCGA 5 cut(s) 30, 982, 1412, 2363, 2433
TatI WGTACW 2 cut(s) 302, 2022
TfiI GAWTC 3 cut(s) 542, 1724, 2307
TscAI CASTG 2 cut(s) 508, 2335
TseFI GTSAC 2 cut(s) 973, 1392
TseI GCWGC 4 cut(s) 116, 1163, 1695, 2189
Tsp45I GTSAC 2 cut(s) 973, 1392
TspGWI ACGGA 1 cut(s) 10
TspRI CASTG 2 cut(s) 508, 2335
Vha464I CTTAAG 1 cut(s) 416
VneI GTGCAC 1 cut(s) 1541
VpaK11BI GGWCC 4 cut(s) 745, 904, 1667, 2474
VspI ATTAAT 1 cut(s) 938
XapI RAATTY 6 cut(s) 439, 811, 1730, 1786, 2269, 2290
XbaI TCTAGA 1 cut(s) 883
XmiI GTMKAC 1 cut(s) 1954
XmnI GAANNNNTTC 2 cut(s) 304, 1812
XspI CTAG 4 cut(s) 884, 1247, 1692, 2066
ZrmI AGTACT 2 cut(s) 304, 2024
Zsp2I ATGCAT 3 cut(s) 112, 1533, 1682
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.