Rmu_sc0000271.1_g000045

disease resistance protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000271.1
OG0000018
Physical Location & Seq
Reverse (-)
226537 .. 229802
3266 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000271.1_g000045.1.cds

Sequence Viewer

Length: 2967 bp
atggccgaggcactcatcaacctgcttctggaacagttggttacagttgcttttgaccacacaaaagaagctgtgacactggtctcgaatgctaagacagaggtaaaaaaattcagcagcaatctcaaagcaattcaagctgtgctggaggatgctgagaagcagcaagtggagaaggccagcgtgaagatctggttggatcagctgaatgatgtctcttacgagatggtcgacgtgctagatgagtggaacactgaaattctgaaacaaaaggcaaagggagttcctactgagaaaaagaaaaccttcaagaaggtatgttttgccattccctcgaattgcttttgttttggcctcgtcaataaggcaagtcttctttataaaatagcaactgagataaaagagttgaatgaaaagttaagttcgattgctgctcagaagagagattttgagttccatgaatcctcaattagcattgttgaacaagttaatcaacggctggaaacttcatcatttgttgatatttctaaaatattcggcagagaagtagcaagagttgatttattaaacaagttattgagtgatagtagtgaagaaggtgaaagggtccttgtcatacctattgtgggtatgggagggatggggaaaacaactcttgcccaattagcctacaacaatgagaatgtaaaaacctattttgaaaagagaatatgggtttgtgtctcagatccttttgatgaggtgaagattgccaaagccattattagtggtactggtaatgaagccccaaattcaaccgtgttgcaagaggtcttgcagcgtatgtctgaatctcttgaggagaagaagttcctcattgtcttagatgatgtgtggactgaagaagaaacaaagtgggacaatttacagttatcagtgatgatgcaaagtaattgtgcaaaaggtagcagaatattggtgaccacgcgaaagaagggggttgctgaaatgatgaaagcagacgctcagatgatccaaatagagaagttgagtgataaaacctgttttgaactgttcagcagtattgcgtttttgaatagggaagaagataaggctaatggatttggagttataggtgagaaaattgtagaaaagtgtgacggcttgccacttgctatcaaatgtttaggtaaactcatgcacaggaaaaaaacaataggagagtggcaaaatgttttggatagtaagatatggaatctaagagcggttaagcaagaagtttttcgaccacttctactaagttattatgagttggcccctatagttaagcaatgtcttttatattgtgctacatttccaaaagattatcagtttaataaacacaatttgattgatttgtggatgtcacaagattatcttagtgggaaggaatataaagaaaaggaagaaatgggtgaatatgtttttgatacattagtgatgcaatcatttttccaggatgttgaggaagaagttgatgattgggataagagcattactatattatgcaaaatgcatgatattgtgcatgactttatgcagttcctcaataagaatgaatgctttacaatggaggctaaagaagcaaacacaagaatgatggtaataagtgaggaggtccgtcatttgagcttaatgtatgcaccctatagttctccacttctggattttattcccctagtgaattgcaaaaagttgcgtactctagcaacttttgattcaagtatgagtagcatagatataaaagcaatttcacaactgaaatgtctgaggacattaaatctgagcgacaacggcattcaagaacttccagaagagattggtgaattgatacacttgaggtatctcgacttgtctgaaaatggtgagttggagaaactaccagacagtttgggcaatttatacaatttgcaaaccttgcgtcttactgactgcgacagccttgaaaaactgcctgaaaacatggggaacttgattaatctaagacatcttcataccaagcgttgtgattctctggagtatttgccgagaggtatcgggagattaacaagtctgcaaacgctaaacacgtgtcctgttaatcatgatagtggccccagtgaaggcttaaaattaggagatctgggaagcttggaccagcttcagggcagtctcgtcattaacatcaaggggaatttgaaggatactgcgagtgaggcgcagaaggctacagtttggaataaaaagctttgtattttggggctacagtttccaactttggacaagcagagccatgaacaagtcctggaggcgttacggccgcatcaagatctgcaaactttagtgattagtgggtatggtggcaccgcggagcccagttggatgatatccttacagaatttgagatccctgtatctttatacttgggatggatgtgaatttttgcctcctcttgggaaattgcccttccttgaaaaactatatatagaaggaatggagaaagtgaagacggttggagatgaattcttgggaataacggacactcaaacatcctcatcctcatcctctgttttattcccaaaattgaaaaaactcaatttcgagcaaatgggtgagtgggaacagtgggaaggagttggagggcggacagaaaccagtggtgcggaaatttcaattatgccatgccttgtcaagttcacaattgacaactgccctaagctgatgaacctgccactcttcctacaaaacacaccggtcagaaaaattcgcatcagtgaatgtcgtcggagtattataacacctgtctggcccgacaactgtgacgtcaacatttttagagcgctcgaggatccagaaacaccaaatagtactgagagcagagttgaaacagaaatactgatagactcacagagagatgaggagatcaccatgtcacctgttgaaacagagatacagaaacttacagagtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

988

Amino Acids

112.22

Weight (kDa)

5.1

Isoelectric Point (pI)

45.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000018)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_3g02290 FvH4_5g32191 FvH4_5g32210 FvH4_5g32230 FvH4_5g32420 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g32430 FvH4_5g33110 FvH4_5g33290 FvH4_6g01191 FvH4_6g28061 FvH4_6g29480 FvH4_6g29480 FvH4_6g30331 FvH4_6g32101 FvH4_6g32110 FvH4_6g51140 FvH4_6g51141 FvH4_6g52150 FvH4_7g21941 FvH4_7g22003 FvH4_7g22004 FvH4_7g22140 FvH4_7g22591 FvH4_7g22741 FvH4_7g23500 FvH4_7g23840 FvH4_7g23850 FvH4_7g26370
malus_domestica MD03G1045400.v1.1 MD03G1061200.v1.1 MD03G1061300.v1.1 MD03G1067300.v1.1 MD03G1067700.v1.1 MD03G1067800.v1.1 MD08G1042700.v1.1 MD08G1043000.v1.1 MD08G1045100.v1.1 MD08G1045800.v1.1 MD08G1045900.v1.1 MD08G1047100.v1.1 MD08G1072200.v1.1 MD08G1093300.v1.1 MD08G1094100.v1.1 MD08G1094300.v1.1 MD08G1094800.v1.1 MD08G1096800.v1.1 MD08G1097100.v1.1 MD08G1098600.v1.1 MD08G1099900.v1.1 MD08G1104200.v1.1 MD08G1104300.v1.1 MD11G1063800.v1.1 MD11G1063900.v1.1 MD11G1064300.v1.1 MD11G1064900.v1.1 MD15G1035200.v1.1 MD15G1035600.v1.1 MD15G1042600.v1.1 MD15G1046900.v1.1 MD15G1054600.v1.1 MD15G1054700.v1.1 MD15G1054800.v1.1
prunus_persica Prupe.1G524900_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528800_v2.0.a1 Prupe.1G528900_v2.0.a1 Prupe.1G529000_v2.0.a1 Prupe.1G538500_v2.0.a1 Prupe.1G544800_v2.0.a1 Prupe.1G545000_v2.0.a1 Prupe.1G545100_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545200_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.1G545300_v2.0.a1 Prupe.3G085000_v2.0.a1 Prupe.3G086700_v2.0.a1 Prupe.3G086800_v2.0.a1 Prupe.3G087900_v2.0.a1 Prupe.3G088000_v2.0.a1 Prupe.3G089000_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089100_v2.0.a1 Prupe.3G089200_v2.0.a1 Prupe.3G089400_v2.0.a1 Prupe.3G092700_v2.0.a1 Prupe.3G093000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284000_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284300_v2.0.a1 Prupe.4G284800_v2.0.a1 Prupe.4G285100_v2.0.a1 Prupe.4G285500_v2.0.a1 Prupe.4G285500_v2.0.a1
pyrus_communis pycom03g03500 pycom03g03510 pycom03g03520 pycom03g03530 pycom03g03550 pycom03g05410 pycom08g03690 pycom08g03950 pycom08g07590 pycom08g07680 pycom08g08030 pycom08g08120 pycom11g05380 pycom11g05400 pycom11g05420 pycom11g05440 pycom11g05450 pycom11g05460 pycom15g03240 pycom15g03290 pycom15g04720 pycom15g05170 pycom17g13290
rosa_chinensis RchiOBHm_Chr1g0340771 RchiOBHm_Chr1g0361911 RchiOBHm_Chr1g0366291 RchiOBHm_Chr1g0367821 RchiOBHm_Chr1g0367831 RchiOBHm_Chr1g0368631 RchiOBHm_Chr1g0369581 RchiOBHm_Chr1g0369611 RchiOBHm_Chr2g0120611 RchiOBHm_Chr2g0130951 RchiOBHm_Chr2g0131561 RchiOBHm_Chr2g0131851 RchiOBHm_Chr2g0131891 RchiOBHm_Chr2g0131931 RchiOBHm_Chr2g0134391 RchiOBHm_Chr2g0134631 RchiOBHm_Chr2g0134641 RchiOBHm_Chr2g0134661 RchiOBHm_Chr2g0134991 RchiOBHm_Chr2g0135001 RchiOBHm_Chr2g0135021 RchiOBHm_Chr2g0135051 RchiOBHm_Chr2g0135151 RchiOBHm_Chr2g0135171 RchiOBHm_Chr2g0139781 RchiOBHm_Chr2g0139801 RchiOBHm_Chr2g0139871 RchiOBHm_Chr2g0139881 RchiOBHm_Chr2g0164331 RchiOBHm_Chr2g0164491 RchiOBHm_Chr2g0164561 RchiOBHm_Chr3g0490871 RchiOBHm_Chr3g0492181 RchiOBHm_Chr4g0389051 RchiOBHm_Chr5g0003421 RchiOBHm_Chr5g0003441 RchiOBHm_Chr5g0008141 RchiOBHm_Chr5g0008151 RchiOBHm_Chr5g0048721 RchiOBHm_Chr5g0048731 RchiOBHm_Chr6g0267871 RchiOBHm_Chr6g0275061 RchiOBHm_Chr7g0224961 RchiOBHm_Chr7g0225001 RchiOBHm_Chr7g0225011 RchiOBHm_Chr7g0225081 RchiOBHm_Chr7g0225131 RchiOBHm_Chr7g0227231 RchiOBHm_Chr7g0228261 RchiOBHm_Chr7g0228341 RchiOBHm_Chr7g0228901 RchiOBHm_Chr7g0229271 RchiOBHm_Chr7g0229291 RchiOBHm_Chr7g0229341 RchiOBHm_Chr7g0229361 RchiOBHm_Chr7g0229431 RchiOBHm_Chr7g0229471 RchiOBHm_Chr7g0229521 RchiOBHm_Chr7g0229571 RchiOBHm_Chr7g0229681 RchiOBHm_Chr7g0229691 RchiOBHm_Chr7g0229741 RchiOBHm_Chr7g0229781 RchiOBHm_Chr7g0229831 RchiOBHm_Chr7g0229921 RchiOBHm_Chr7g0229931 RchiOBHm_Chr7g0229941 RchiOBHm_Chr7g0230071 RchiOBHm_Chr7g0230171 RchiOBHm_Chr7g0230181 RchiOBHm_Chr7g0230391 RchiOBHm_Chr7g0230401 RchiOBHm_Chr7g0231561 RchiOBHm_Chr7g0231671 RchiOBHm_Chr7g0231701 RchiOBHm_Chr7g0231731 RchiOBHm_Chr7g0231761 RchiOBHm_Chr7g0231851 RchiOBHm_Chr7g0231871 RchiOBHm_Chr7g0231911 RchiOBHm_Chr7g0231931 RchiOBHm_Chr7g0231961 RchiOBHm_Chr7g0232031 RchiOBHm_Chr7g0232041
rosa_laevigata RLG00000001537 RLG00000018772 RLG00000019159 RLG00000019199 RLG00000019214 RLG00000019218 RLG00000019389 RLG00000019407 RLG00000019418 RLG00000019437 RLG00000019438 RLG00000019445 RLG00000019833 RLG00000019836 RLG00000021454 RLG00000021463 RLG00000021464 RLG00000021465 RLG00000022820
rosa_multiflora Rmu_co8062456.1_g000001 Rmu_co8347363.1_g000001 Rmu_co8390161.1_g000001 Rmu_co8431733.1_g000001 Rmu_co8435525.1_g000001 Rmu_co8458367.1_g000001 Rmu_sc0000100.1_g000006 Rmu_sc0000150.1_g000001 Rmu_sc0000271.1_g000045 Rmu_sc0000322.1_g000040 Rmu_sc0000447.1_g000007 Rmu_sc0000545.1_g000006 Rmu_sc0000545.1_g000017 Rmu_sc0000584.1_g000003 Rmu_sc0000584.1_g000007 Rmu_sc0000693.1_g000035 Rmu_sc0000693.1_g000037 Rmu_sc0000693.1_g000052 Rmu_sc0000693.1_g000057 Rmu_sc0000693.1_g000060 Rmu_sc0000693.1_g000073 Rmu_sc0000718.1_g000040 Rmu_sc0000718.1_g000041 Rmu_sc0000721.1_g000002 Rmu_sc0000851.1_g000006 Rmu_sc0000851.1_g000008 Rmu_sc0001154.1_g000007 Rmu_sc0001154.1_g000012 Rmu_sc0001154.1_g000021 Rmu_sc0001211.1_g000133 Rmu_sc0001336.1_g000041 Rmu_sc0001352.1_g000003 Rmu_sc0001352.1_g000005 Rmu_sc0001352.1_g000009 Rmu_sc0001352.1_g000026 Rmu_sc0001352.1_g000030 Rmu_sc0001385.1_g000011 Rmu_sc0001621.1_g000006 Rmu_sc0001621.1_g000015 Rmu_sc0001621.1_g000016 Rmu_sc0001621.1_g000017 Rmu_sc0001626.1_g000007 Rmu_sc0001626.1_g000009 Rmu_sc0001626.1_g000016 Rmu_sc0001791.1_g000004 Rmu_sc0001791.1_g000006 Rmu_sc0001918.1_g000009 Rmu_sc0001918.1_g000010 Rmu_sc0001918.1_g000012 Rmu_sc0002541.1_g000029 Rmu_sc0002589.1_g000003 Rmu_sc0002589.1_g000004 Rmu_sc0002589.1_g000045 Rmu_sc0002589.1_g000046 Rmu_sc0002666.1_g000004 Rmu_sc0002666.1_g000005 Rmu_sc0002738.1_g000004 Rmu_sc0002792.1_g000002 Rmu_sc0002822.1_g000032 Rmu_sc0002874.1_g000003 Rmu_sc0002874.1_g000004 Rmu_sc0002938.1_g000021 Rmu_sc0003063.1_g000007 Rmu_sc0003063.1_g000013 Rmu_sc0003153.1_g000007 Rmu_sc0003153.1_g000008 Rmu_sc0003327.1_g000001 Rmu_sc0003327.1_g000002 Rmu_sc0003629.1_g000043 Rmu_sc0003646.1_g000001 Rmu_sc0003731.1_g000002 Rmu_sc0003731.1_g000009 Rmu_sc0003731.1_g000010 Rmu_sc0003731.1_g000011 Rmu_sc0003736.1_g000008 Rmu_sc0003786.1_g000001 Rmu_sc0004110.1_g000001 Rmu_sc0004110.1_g000002 Rmu_sc0004216.1_g000003 Rmu_sc0004618.1_g000027 Rmu_sc0004618.1_g000032 Rmu_sc0004842.1_g000008 Rmu_sc0004842.1_g000018 Rmu_sc0004929.1_g000006 Rmu_sc0005400.1_g000012 Rmu_sc0005400.1_g000013 Rmu_sc0006671.1_g000002 Rmu_sc0006926.1_g000019 Rmu_sc0006926.1_g000020 Rmu_sc0007103.1_g000016 Rmu_sc0007108.1_g000007 Rmu_sc0007154.1_g000012 Rmu_sc0008351.1_g000010 Rmu_sc0008778.1_g000001 Rmu_sc0008991.1_g000012 Rmu_sc0009787.1_g000017 Rmu_sc0009986.1_g000010 Rmu_sc0009986.1_g000012 Rmu_sc0010008.1_g000003 Rmu_sc0010008.1_g000004 Rmu_sc0010008.1_g000005 Rmu_sc0010898.1_g000001 Rmu_sc0011233.1_g000001 Rmu_sc0011454.1_g000002 Rmu_sc0011584.1_g000001 Rmu_sc0011584.1_g000002 Rmu_sc0011658.1_g000001 Rmu_sc0011851.1_g000001 Rmu_sc0011851.1_g000002 Rmu_sc0013445.1_g000001 Rmu_sc0014443.1_g000001 Rmu_sc0014759.1_g000001 Rmu_sc0014759.1_g000002 Rmu_sc0016484.1_g000002 Rmu_sc0016837.1_g000004 Rmu_sc0019504.1_g000001 Rmu_sc0020353.1_g000004 Rmu_sc0021533.1_g000001 Rmu_sc0021595.1_g000002 Rmu_sc0029807.1_g000001 Rmu_sc0030896.1_g000001 Rmu_sc0032943.1_g000001 Rmu_sc0037222.1_g000001 Rmu_ssc0000124.1_g000009 Rmu_ssc0000395.1_g000034 Rmu_ssc0000395.1_g000035 Rmu_ssc0000438.1_g000027 Rmu_ssc0000438.1_g000028 Rmu_ssc0000438.1_g000034 Rmu_ssc0000438.1_g000035
rosa_roxburghii Rroxscaffold_1G00028180 Rroxscaffold_1G00072590 Rroxscaffold_2G00097700 Rroxscaffold_2G00105200 Rroxscaffold_2G00109430 Rroxscaffold_2G00109520 Rroxscaffold_2G00109550 Rroxscaffold_2G00109580 Rroxscaffold_2G00109850 Rroxscaffold_2G00109860 Rroxscaffold_2G00109920 Rroxscaffold_2G00109940 Rroxscaffold_2G00110280 Rroxscaffold_2G00112580 Rroxscaffold_2G00112780 Rroxscaffold_2G00112800 Rroxscaffold_3G00228890 Rroxscaffold_3G00228930 Rroxscaffold_3G00230320 Rroxscaffold_3G00231240 Rroxscaffold_3G00232250 Rroxscaffold_4G00287510 Rroxscaffold_4G00289180 Rroxscaffold_4G00290020 Rroxscaffold_4G00290270 Rroxscaffold_4G00311390 Rroxscaffold_4G00315230 Rroxscaffold_4G00321660 Rroxscaffold_7G00193710
rosa_rugosa Rorug01G0292300 Rorug01G0328500 Rorug01G0337100 Rorug01G0343300 Rorug01G0343300 Rorug01G0343300 Rorug01G0351600 Rorug01G0370300 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0232900 Rorug02G0265100 Rorug02G0265400 Rorug02G0265600 Rorug02G0265800 Rorug02G0267000.1 Rorug02G0267700 Rorug02G0268300 Rorug02G0269000 Rorug02G0269600 Rorug02G0292000 Rorug02G0292900 Rorug02G0294100 Rorug02G0297700 Rorug02G0297800.1 Rorug02G0298100.1 Rorug02G0300600 Rorug02G0300600 Rorug02G0300600 Rorug02G0300700 Rorug02G0307200 Rorug02G0316700 Rorug02G0318800 Rorug02G0319500 Rorug02G0319600 Rorug02G0321800 Rorug02G0321900 Rorug02G0322000 Rorug02G0322200 Rorug02G0322300 Rorug02G0322500 Rorug02G0323700 Rorug02G0359900 Rorug02G0508000 Rorug02G0508500 Rorug02G0508800 Rorug03G0247000 Rorug03G0247100 Rorug04G0403100 Rorug04G0403300 Rorug04G0421400 Rorug04G0421500 Rorug04G0433400 Rorug04G0433400 Rorug04G0459100 Rorug04G0459300 Rorug05G0360200 Rorug06G0034600 Rorug06G0060600 Rorug06G0087200 Rorug07G0227300 Rorug07G0227500 Rorug07G0241100 Rorug07G0247500 Rorug07G0247600.1 Rorug07G0247700 Rorug07G0252800 Rorug07G0253300 Rorug07G0253700 Rorug07G0253800 Rorug07G0254000 Rorug07G0254200 Rorug07G0254200 Rorug07G0254200 Rorug07G0254700 Rorug07G0254700 Rorug07G0258300 Rorug07G0258500 Rorug07G0258700 Rorug07G0259100 Rorug07G0259500 Rorug07G0259600 Rorug07G0259800 Rorug07G0260400 Rorug07G0267900 Rorug07G0267900 Rorug07G0268000 Rorug07G0268000 Rorug07G0268400 Rorug07G0268400 Rorug07G0268600 Rorug07G0271600 Rorug07G0271600
rosa_samantha Rh2AG409800 Rh2AG410200 Rh2BG375200 Rh2BG420300 Rh2CG352800 Rh2CG396300 Rh2DG392300 Rh2DG429600 Rh2DG429900 Rh7CG443100 Rh7DG415200
rosa_wichuraiana Rw0G001880 Rw0G004020 Rw0G013400 Rw0G018600 Rw0G022140 Rw1G029850 Rw1G030630 Rw1G031690 Rw2G027580 Rw2G028510 Rw2G028630 Rw2G028660 Rw2G028700 Rw2G028730 Rw2G030070 Rw2G030230 Rw2G030460 Rw2G030480 Rw2G030510 Rw2G030520 Rw2G030540 Rw2G033370 Rw2G033390 Rw2G033580 Rw2G033600 Rw2G033610 Rw2G047700 Rw2G047790 Rw2G047880 Rw5G002800 Rw5G005880 Rw6G013590 Rw7G033310 Rw7G033370 Rw7G033640 Rw7G033690 Rw7G033950 Rw7G033990 Rw7G034000 Rw7G034030 Rw7G034040 Rw7G034160 Rw7G034890 Rw7G034920 Rw7G034990

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 381, 2792
AatII GACGTC 1 cut(s) 2823
Acc36I ACCTGC 2 cut(s) 30, 2733
AccB1I GGYRCC 1 cut(s) 2360
AccBSI CCGCTC 1 cut(s) 1244
AccI GTMKAC 1 cut(s) 231
AccII CGCG 2 cut(s) 967, 2366
AciI CCGC 6 cut(s) 1244, 2318, 2364, 2366, 2641, 2660
AclWI GGATC 6 cut(s) 207, 722, 1006, 2397, 2840, 2853
AcoI YGGCCR 2 cut(s) 3, 2315
AcsI RAATTY 9 cut(s) 110, 258, 790, 2191, 2395, 2435, 2519, 2664, 2760
AcuI CTGAAG 2 cut(s) 900, 2144
AcvI CACGTG 1 cut(s) 2088
AcyI GRCGYC 1 cut(s) 2820
AfaI GTAC 3 cut(s) 772, 1720, 2866
AfeI AGCGCT 1 cut(s) 2838
AfiI CCNNNNNNNGG 5 cut(s) 28, 626, 2120, 2161, 2450
AflIII ACRYGT 2 cut(s) 2085, 2087
AgeI ACCGGT 1 cut(s) 2749
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 2 cut(s) 1473, 2301
AjuI GAANNNNNNNTTGG 2 cut(s) 179, 211
AloI GAACNNNNNNTCC 2 cut(s) 833, 865
AluBI AGCT 8 cut(s) 71, 140, 205, 1650, 2148, 2158, 2245, 2716
AluI AGCT 8 cut(s) 71, 140, 205, 1650, 2148, 2158, 2245, 2716
Alw26I GTCTC 4 cut(s) 88, 220, 727, 2174
AlwI GGATC 6 cut(s) 207, 722, 1006, 2397, 2840, 2853
Ama87I CYCGRG 1 cut(s) 2840
Aor51HI AGCGCT 1 cut(s) 2838
AoxI GGCC 7 cut(s) 3, 177, 352, 1293, 2110, 2315, 2804
ApeKI GCWGC 4 cut(s) 117, 163, 431, 817
ApoI RAATTY 9 cut(s) 110, 258, 790, 2191, 2395, 2435, 2519, 2664, 2760
ArsI GACNNNNNNTTYG 2 cut(s) 1924, 1956
AseI ATTAAT 1 cut(s) 1995
AsiGI ACCGGT 1 cut(s) 2749
Asp700I GAANNNNTTC 3 cut(s) 305, 848, 1260
AspLEI GCGC 2 cut(s) 2218, 2839
AspS9I GGNCC 6 cut(s) 607, 1294, 1636, 2111, 2152, 2805
AvaI CYCGRG 1 cut(s) 2840
AvaII GGWCC 3 cut(s) 607, 1636, 2152
BaeI ACNNNNGTAYC 2 cut(s) 1440, 1473
BamHI GGATCC 1 cut(s) 2845
BanI GGYRCC 1 cut(s) 2360
BanII GRGCYC 1 cut(s) 2373
BbrPI CACGTG 1 cut(s) 2088
BbsI GAAGAC 2 cut(s) 365, 2510
BbvI GCAGC 4 cut(s) 129, 175, 418, 829
BccI CCATC 4 cut(s) 220, 634, 1612, 2420
BceAI ACGGC 4 cut(s) 512, 1156, 1828, 2330
BciT130I CCWGG 2 cut(s) 1475, 2303
BciVI GTATCC 1 cut(s) 2194
BcoDI GTCTC 4 cut(s) 88, 220, 727, 2174
BfaI CTAG 3 cut(s) 239, 1697, 1724
BfmI CTRYAG 4 cut(s) 1299, 1666, 2226, 2261
BfoI RGCGCY 1 cut(s) 2840
BfuAI ACCTGC 2 cut(s) 30, 2733
BfuI GTATCC 1 cut(s) 2194
BglII AGATCT 3 cut(s) 189, 2137, 2326
BisI GCNGC 5 cut(s) 118, 164, 432, 818, 2318
BlsI GCNGC 5 cut(s) 119, 165, 433, 819, 2319
BmcAI AGTACT 1 cut(s) 2866
Bme1390I CCNGG 2 cut(s) 1475, 2303
Bme18I GGWCC 3 cut(s) 607, 1636, 2152
BmeT110I CYCGRG 1 cut(s) 2840
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 6 cut(s) 607, 1294, 1636, 2111, 2152, 2805
BmiI GGNNCC 6 cut(s) 608, 1296, 2113, 2362, 2370, 2847
BmrFI CCNGG 2 cut(s) 1475, 2303
BmrI ACTGGG 2 cut(s) 2109, 2367
BmsI GCATC 5 cut(s) 142, 912, 1449, 2329, 2775
BmuI ACTGGG 2 cut(s) 2109, 2367
BoxI GACNNNNGTC 1 cut(s) 80
BpiI GAAGAC 2 cut(s) 365, 2510
BpmI CTGGAG 3 cut(s) 167, 2054, 2324
Bpu10I CCTNAGC 1 cut(s) 2712
BpuEI CTTGAG 2 cut(s) 857, 1876
BsaAI YACGTR 1 cut(s) 2088
BsaHI GRCGYC 1 cut(s) 2820
BsaI GGTCTC 1 cut(s) 88
BsaJI CCNNGG 2 cut(s) 6, 2364
BsaWI WCCGGW 1 cut(s) 2749
BsaXI ACNNNNNCTCC 2 cut(s) 833, 863
Bsc4I CCNNNNNNNGG 5 cut(s) 28, 626, 2120, 2161, 2450
Bse118I RCCGGY 1 cut(s) 2749
Bse1I ACTGG 5 cut(s) 84, 778, 2115, 2373, 2652
Bse3DI GCAATG 1 cut(s) 1316
BseBI CCWGG 2 cut(s) 1475, 2303
BseDI CCNNGG 2 cut(s) 6, 2364
BseLI CCNNNNNNNGG 5 cut(s) 28, 626, 2120, 2161, 2450
BseMI GCAATG 1 cut(s) 1316
BseMII CTCAG 9 cut(s) 147, 282, 384, 449, 738, 1019, 1778, 1793, 2859
BseNI ACTGG 5 cut(s) 84, 778, 2115, 2373, 2652
BseRI GAGGAG 4 cut(s) 854, 1646, 2436, 2930
BseX3I CGGCCG 1 cut(s) 2315
BseXI GCAGC 4 cut(s) 129, 175, 418, 829
Bsh1236I CGCG 2 cut(s) 967, 2366
Bsh1285I CGRYCG 1 cut(s) 2318
BshFI GGCC 7 cut(s) 5, 179, 354, 1295, 2112, 2317, 2806
BshNI GGYRCC 1 cut(s) 2360
BshTI ACCGGT 1 cut(s) 2749
BsiEI CGRYCG 1 cut(s) 2318
BsiHKCI CYCGRG 1 cut(s) 2840
BsiSI CCGG 1 cut(s) 2750
BslFI GGGAC 1 cut(s) 911
BslI CCNNNNNNNGG 5 cut(s) 28, 626, 2120, 2161, 2450
BsmAI GTCTC 4 cut(s) 88, 220, 727, 2174
BsmFI GGGAC 1 cut(s) 911
BsmI GAATGC 3 cut(s) 94, 1583, 1815
BsnI GGCC 7 cut(s) 5, 179, 354, 1295, 2112, 2317, 2806
Bso31I GGTCTC 1 cut(s) 88
BsoBI CYCGRG 1 cut(s) 2840
Bsp1286I GDGCHC 1 cut(s) 2373
Bsp143I GATC 9 cut(s) 189, 199, 727, 1011, 2137, 2326, 2402, 2845, 2919
BspACI CCGC 6 cut(s) 1244, 2318, 2364, 2366, 2641, 2660
BspANI GGCC 7 cut(s) 5, 179, 354, 1295, 2112, 2317, 2806
BspCNI CTCAG 9 cut(s) 148, 283, 385, 448, 737, 1018, 1779, 1794, 2860
BspFNI CGCG 2 cut(s) 967, 2366
BspHI TCATGA 1 cut(s) 2101
BspLI GGNNCC 6 cut(s) 608, 1296, 2113, 2362, 2370, 2847
BspMI ACCTGC 2 cut(s) 30, 2733
BspPI GGATC 6 cut(s) 207, 722, 1006, 2397, 2840, 2853
BspT107I GGYRCC 1 cut(s) 2360
BspTNI GGTCTC 1 cut(s) 88
BsrBI CCGCTC 1 cut(s) 1244
BsrDI GCAATG 1 cut(s) 1316
BsrFI RCCGGY 1 cut(s) 2749
BsrI ACTGG 5 cut(s) 84, 778, 2115, 2373, 2652
BssAI RCCGGY 1 cut(s) 2749
BssECI CCNNGG 2 cut(s) 6, 2364
BssMI GATC 9 cut(s) 189, 199, 727, 1011, 2137, 2326, 2402, 2845, 2919
BssNI GRCGYC 1 cut(s) 2820
Bst2UI CCWGG 2 cut(s) 1475, 2303
Bst6I CTCTTC 3 cut(s) 434, 1827, 2738
BstACI GRCGYC 1 cut(s) 2820
BstAPI GCANNNNNTGC 1 cut(s) 1936
BstBAI YACGTR 1 cut(s) 2088
BstC8I GCNNGC 2 cut(s) 181, 1145
BstDSI CCRYGG 1 cut(s) 2364
BstEII GGTNACC 1 cut(s) 958
BstFNI CGCG 2 cut(s) 967, 2366
BstH2I RGCGCY 1 cut(s) 2840
BstHHI GCGC 2 cut(s) 2218, 2839
BstKTI GATC 9 cut(s) 192, 202, 730, 1014, 2140, 2329, 2405, 2848, 2922
BstMAI GTCTC 4 cut(s) 88, 220, 727, 2174
BstMBI GATC 9 cut(s) 189, 199, 727, 1011, 2137, 2326, 2402, 2845, 2919
BstMCI CGRYCG 1 cut(s) 2318
BstMWI GCNNNNNNNGC 7 cut(s) 137, 665, 1601, 1812, 1936, 2213, 2222
BstNI CCWGG 2 cut(s) 1475, 2303
BstPAI GACNNNNGTC 1 cut(s) 80
BstPI GGTNACC 1 cut(s) 958
BstSCI CCNGG 2 cut(s) 1473, 2301
BstSFI CTRYAG 4 cut(s) 1299, 1666, 2226, 2261
BstUI CGCG 2 cut(s) 967, 2366
BstV1I GCAGC 4 cut(s) 129, 175, 418, 829
BstV2I GAAGAC 2 cut(s) 365, 2510
BstX2I RGATCY 6 cut(s) 189, 727, 2137, 2326, 2402, 2845
BstYI RGATCY 6 cut(s) 189, 727, 2137, 2326, 2402, 2845
BstZI CGGCCG 1 cut(s) 2315
BsuI GTATCC 1 cut(s) 2194
BsuRI GGCC 7 cut(s) 5, 179, 354, 1295, 2112, 2317, 2806
BtgI CCRYGG 1 cut(s) 2364
BtrI CACGTC 1 cut(s) 235
BtsIMutI CAGTG 7 cut(s) 77, 252, 921, 2122, 2627, 2659, 2776
BveI ACCTGC 2 cut(s) 30, 2733
Cac8I GCNNGC 2 cut(s) 181, 1145
CciI TCATGA 1 cut(s) 2101
CfoI GCGC 2 cut(s) 2218, 2839
Cfr10I RCCGGY 1 cut(s) 2749
Cfr13I GGNCC 6 cut(s) 607, 1294, 1636, 2111, 2152, 2805
Cfr42I CCGCGG 1 cut(s) 2367
CseI GACGC 2 cut(s) 1010, 1928
Csp6I GTAC 3 cut(s) 771, 1719, 2865
CspAI ACCGGT 1 cut(s) 2749
CviAII CATG 9 cut(s) 458, 1177, 1535, 1547, 1981, 2102, 2291, 2679, 2926
CviQI GTAC 3 cut(s) 771, 1719, 2865
DpnI GATC 9 cut(s) 191, 201, 729, 1013, 2139, 2328, 2404, 2847, 2921
DpnII GATC 9 cut(s) 189, 199, 727, 1011, 2137, 2326, 2402, 2845, 2919
EaeI YGGCCR 2 cut(s) 3, 2315
EagI CGGCCG 1 cut(s) 2315
Eam1104I CTCTTC 3 cut(s) 434, 1827, 2738
EarI CTCTTC 3 cut(s) 434, 1827, 2738
EciI GGCGGA 1 cut(s) 2656
EclXI CGGCCG 1 cut(s) 2315
Eco24I GRGCYC 1 cut(s) 2373
Eco31I GGTCTC 1 cut(s) 88
Eco32I GATATC 1 cut(s) 2385
Eco47I GGWCC 3 cut(s) 607, 1636, 2152
Eco47III AGCGCT 1 cut(s) 2838
Eco52I CGGCCG 1 cut(s) 2315
Eco57I CTGAAG 2 cut(s) 900, 2144
Eco72I CACGTG 1 cut(s) 2088
Eco88I CYCGRG 1 cut(s) 2840
Eco91I GGTNACC 1 cut(s) 958
EcoO109I RGGNCCY 1 cut(s) 607
EcoO65I GGTNACC 1 cut(s) 958
EcoRI GAATTC 1 cut(s) 2519
EcoRII CCWGG 2 cut(s) 1473, 2301
EcoRV GATATC 1 cut(s) 2385
EcoT22I ATGCAT 1 cut(s) 1536
EcoT38I GRGCYC 1 cut(s) 2373
FaeI CATG 9 cut(s) 461, 1180, 1538, 1550, 1984, 2105, 2294, 2682, 2929
FalI AAGNNNNNCTT 4 cut(s) 290, 322, 1380, 1412
FaqI GGGAC 1 cut(s) 911
FatI CATG 9 cut(s) 457, 1176, 1534, 1546, 1980, 2101, 2290, 2678, 2925
FblI GTMKAC 1 cut(s) 231
Fnu4HI GCNGC 5 cut(s) 118, 164, 432, 818, 2318
FriOI GRGCYC 1 cut(s) 2373
Fsp4HI GCNGC 5 cut(s) 118, 164, 432, 818, 2318
FspBI CTAG 3 cut(s) 239, 1697, 1724
GlaI GCGC 2 cut(s) 2217, 2838
GluI GCNGC 5 cut(s) 118, 164, 432, 818, 2318
GsuI CTGGAG 3 cut(s) 167, 2054, 2324
HaeII RGCGCY 1 cut(s) 2840
HaeIII GGCC 7 cut(s) 5, 179, 354, 1295, 2112, 2317, 2806
HapII CCGG 1 cut(s) 2750
HgaI GACGC 2 cut(s) 1010, 1928
HhaI GCGC 2 cut(s) 2218, 2839
Hin1I GRCGYC 1 cut(s) 2820
Hin1II CATG 9 cut(s) 461, 1180, 1538, 1550, 1984, 2105, 2294, 2682, 2929
Hin6I GCGC 2 cut(s) 2216, 2837
HinP1I GCGC 2 cut(s) 2216, 2837
HincII GTYRAC 2 cut(s) 232, 2824
HindII GTYRAC 2 cut(s) 232, 2824
HindIII AAGCTT 2 cut(s) 2146, 2243
HinfI GANTC 6 cut(s) 461, 830, 1234, 1736, 2027, 2900
HpaII CCGG 1 cut(s) 2750
Hpy166II GTNNAC 5 cut(s) 232, 876, 1172, 2694, 2824
Hpy8I GTNNAC 5 cut(s) 232, 876, 1172, 2694, 2824
Hpy99I CGWCG 2 cut(s) 236, 2784
HpyCH4IV ACGT 3 cut(s) 234, 2087, 2820
HpyF10VI GCNNNNNNNGC 7 cut(s) 137, 665, 1601, 1812, 1936, 2213, 2222
HpySE526I ACGT 3 cut(s) 234, 2087, 2820
Hsp92I GRCGYC 1 cut(s) 2820
Hsp92II CATG 9 cut(s) 461, 1180, 1538, 1550, 1984, 2105, 2294, 2682, 2929
HspAI GCGC 2 cut(s) 2216, 2837
KspI CCGCGG 1 cut(s) 2367
Kzo9I GATC 9 cut(s) 189, 199, 727, 1011, 2137, 2326, 2402, 2845, 2919
LmnI GCTCC 1 cut(s) 2368
Lsp1109I GCAGC 4 cut(s) 129, 175, 418, 829
LweI GCATC 5 cut(s) 142, 912, 1449, 2329, 2775
MaeI CTAG 3 cut(s) 239, 1697, 1724
MaeII ACGT 3 cut(s) 234, 2087, 2820
MaeIII GTNAC 8 cut(s) 40, 73, 958, 1136, 1383, 2310, 2816, 2928
MalI GATC 9 cut(s) 191, 201, 729, 1013, 2139, 2328, 2404, 2847, 2921
MbiI CCGCTC 1 cut(s) 1244
MboI GATC 9 cut(s) 189, 199, 727, 1011, 2137, 2326, 2402, 2845, 2919
MfeI CAATTG 1 cut(s) 2697
MflI RGATCY 6 cut(s) 189, 727, 2137, 2326, 2402, 2845
MhlI GDGCHC 1 cut(s) 2373
MlyI GAGTC 1 cut(s) 2894
MmeI TCCRAC 7 cut(s) 177, 1869, 2294, 2357, 2491, 2614, 2762
Mph1103I ATGCAT 1 cut(s) 1536
MroXI GAANNNNTTC 3 cut(s) 305, 848, 1260
MslI CAYNNNNRTG 2 cut(s) 1613, 2106
MspA1I CMGCKG 2 cut(s) 205, 2366
MspI CCGG 1 cut(s) 2750
MspR9I CCNGG 2 cut(s) 1475, 2303
MunI CAATTG 1 cut(s) 2697
Mva1269I GAATGC 3 cut(s) 94, 1583, 1815
MvaI CCWGG 2 cut(s) 1475, 2303
MvnI CGCG 2 cut(s) 967, 2366
MwoI GCNNNNNNNGC 7 cut(s) 137, 665, 1601, 1812, 1936, 2213, 2222
NdeII GATC 9 cut(s) 189, 199, 727, 1011, 2137, 2326, 2402, 2845, 2919
NlaIII CATG 9 cut(s) 461, 1180, 1538, 1550, 1984, 2105, 2294, 2682, 2929
NlaIV GGNNCC 6 cut(s) 608, 1296, 2113, 2362, 2370, 2847
NmeAIII GCCGAG 2 cut(s) 31, 2070
NmuCI GTSAC 6 cut(s) 73, 958, 1136, 1383, 2816, 2928
NsiI ATGCAT 1 cut(s) 1536
PaeR7I CTCGAG 1 cut(s) 2840
PagI TCATGA 1 cut(s) 2101
PcsI WCGNNNNNNNCGW 2 cut(s) 228, 2084
PctI GAATGC 3 cut(s) 94, 1583, 1815
PdmI GAANNNNTTC 3 cut(s) 305, 848, 1260
PfeI GAWTC 5 cut(s) 461, 830, 1234, 1736, 2027
PfoI TCCNGGA 2 cut(s) 1473, 2301
PinAI ACCGGT 1 cut(s) 2749
PkrI GCNGC 5 cut(s) 119, 165, 433, 819, 2319
PleI GAGTC 1 cut(s) 2894
PmaCI CACGTG 1 cut(s) 2088
PmlI CACGTG 1 cut(s) 2088
PpsI GAGTC 1 cut(s) 2894
Ppu21I YACGTR 1 cut(s) 2088
PpuMI RGGWCCY 1 cut(s) 607
PshAI GACNNNNGTC 1 cut(s) 80
PshBI ATTAAT 1 cut(s) 1995
PsiI TTATAA 2 cut(s) 381, 2792
Psp5II RGGWCCY 1 cut(s) 607
Psp6I CCWGG 2 cut(s) 1473, 2301
PspCI CACGTG 1 cut(s) 2088
PspEI GGTNACC 1 cut(s) 958
PspGI CCWGG 2 cut(s) 1473, 2301
PspN4I GGNNCC 6 cut(s) 608, 1296, 2113, 2362, 2370, 2847
PspPI GGNCC 6 cut(s) 607, 1294, 1636, 2111, 2152, 2805
PspPPI RGGWCCY 1 cut(s) 607
PspXI VCTCGAGB 1 cut(s) 2840
PsuI RGATCY 6 cut(s) 189, 727, 2137, 2326, 2402, 2845
PvuII CAGCTG 1 cut(s) 205
RsaI GTAC 3 cut(s) 772, 1720, 2866
RsaNI GTAC 3 cut(s) 771, 1719, 2865
RseI CAYNNNNRTG 2 cut(s) 1613, 2106
SacII CCGCGG 1 cut(s) 2367
SalI GTCGAC 1 cut(s) 230
SatI GCNGC 5 cut(s) 118, 164, 432, 818, 2318
Sau3AI GATC 9 cut(s) 189, 199, 727, 1011, 2137, 2326, 2402, 2845, 2919
Sau96I GGNCC 6 cut(s) 607, 1294, 1636, 2111, 2152, 2805
ScaI AGTACT 1 cut(s) 2866
SchI GAGTC 1 cut(s) 2894
ScrFI CCNGG 2 cut(s) 1475, 2303
SduI GDGCHC 1 cut(s) 2373
SfaNI GCATC 5 cut(s) 142, 912, 1449, 2329, 2775
SfcI CTRYAG 4 cut(s) 1299, 1666, 2226, 2261
Sfr274I CTCGAG 1 cut(s) 2840
Sfr303I CCGCGG 1 cut(s) 2367
SgrBI CCGCGG 1 cut(s) 2367
SinI GGWCC 3 cut(s) 607, 1636, 2152
SlaI CTCGAG 1 cut(s) 2840
SmiMI CAYNNNNRTG 2 cut(s) 1613, 2106
SmlI CTYRAG 3 cut(s) 836, 1855, 2840
SmoI CTYRAG 3 cut(s) 836, 1855, 2840
SsiI CCGC 6 cut(s) 1244, 2318, 2364, 2366, 2641, 2660
SspI AATATT 2 cut(s) 534, 954
SspMI CTAG 3 cut(s) 239, 1697, 1724
StyD4I CCNGG 2 cut(s) 1473, 2301
TaiI ACGT 3 cut(s) 237, 2090, 2823
TaqI TCGA 8 cut(s) 86, 231, 335, 425, 1264, 1866, 2598, 2841
TatI WGTACW 1 cut(s) 2864
TauI GCSGC 1 cut(s) 2320
TfiI GAWTC 5 cut(s) 461, 830, 1234, 1736, 2027
TscAI CASTG 7 cut(s) 84, 259, 921, 2122, 2627, 2659, 2776
TseFI GTSAC 6 cut(s) 73, 958, 1136, 1383, 2816, 2928
TseI GCWGC 4 cut(s) 117, 163, 431, 817
Tsp45I GTSAC 6 cut(s) 73, 958, 1136, 1383, 2816, 2928
TspGWI ACGGA 2 cut(s) 1628, 2549
TspRI CASTG 7 cut(s) 84, 259, 921, 2122, 2627, 2659, 2776
VpaK11BI GGWCC 3 cut(s) 607, 1636, 2152
VspI ATTAAT 1 cut(s) 1995
XapI RAATTY 9 cut(s) 110, 258, 790, 2191, 2395, 2435, 2519, 2664, 2760
XhoI CTCGAG 1 cut(s) 2840
XmiI GTMKAC 1 cut(s) 231
XmnI GAANNNNTTC 3 cut(s) 305, 848, 1260
XspI CTAG 3 cut(s) 239, 1697, 1724
ZraI GACGTC 1 cut(s) 2821
ZrmI AGTACT 1 cut(s) 2866
Zsp2I ATGCAT 1 cut(s) 1536
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.